# terms

id: GO:0033302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving O-glucosylated derivatives of quercetin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin O-glucoside metabolic process","synonyms":[{"name":"quercetin O-glucoside metabolism","type":"exact"}],"termid":"GO:0033302"}


id: GO:0039512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host protein tyrosine kinase activity.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host protein tyrosine kinase activity (obsolete GO:0039512)","synonyms":[{"name":"down-regulation by virus of host protein tyrosine kinase activity","type":"exact"},{"name":"downregulation by virus of host protein tyrosine kinase activity","type":"exact"},{"name":"inhibition by virus of host protein tyrosine kinase activity","type":"narrow"},{"name":"negative regulation by virus of host protein tyrosine kinase activity","type":"exact"}],"termid":"GO:0039512"}


id: GO:0018534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nitrilotriacetate + OH- = H+ + 2 e- + glyoxylate + iminodiacetate.","definition_xrefs":["UM-BBD_reactionID:r0588"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrilotriacetate dehydrogenase activity (obsolete GO:0018534)","termid":"GO:0018534"}


id: FYPO:0007069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which assembly of the ribosomal small subunit is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal ribosomal small subunit assembly","synonyms":[{"name":"abnormal 40S preribosome assembly","type":"narrow"},{"name":"abnormal 40S ribosomal subunit assembly","type":"narrow"},{"name":"abnormal pre-40S ribosome assembly","type":"narrow"},{"name":"abnormal ribosomal small subunit assembly during mitotic cell cycle","type":"related"},{"name":"abnormal ribosomal small subunit assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007069"}


id: PBO:0078409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 3-1","termid":"PBO:0078409"}


id: PBO:0069349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 609, pseudogene","termid":"PBO:0069349"}


id: FYPO:0005912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin remodeling that occurs as part of meiosis I is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:19139281","GO:1905886","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"},{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal meiosis-specific chromatin remodeling","synonyms":[{"name":"normal chromatin remodeling during meiosis I","type":"exact"},{"name":"normal chromatin remodeling involved in meiosis I","type":"exact"},{"name":"normal meiotic nuclear division-specific chromatin remodeling","type":"exact"}],"termid":"FYPO:0005912"}


id: GO:0044412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont in host (obsolete GO:0044412)","synonyms":[{"name":"growth or development of organism within host","type":"exact"},{"name":"growth or development of symbiont in host","type":"exact"},{"name":"growth or development of symbiont within host","type":"exact"},{"name":"invasive growth","type":"broad"}],"termid":"GO:0044412"}


id: SO:0001756
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL11 RNA leader sequence to the 5' end of an mRNA. SL11 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL11_acceptor_site","synonyms":[{"name":"SL11 acceptor site","type":"exact"}],"termid":"SO:0001756"}


id: MONDO:0033483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial polycythemia in which the cause of the disease is a mutation in the EPO gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"erythrocytosis, familial, 5","secondary_identifiers":["OMIM:617907","MEDGEN:1638941","DOID:0080290","UMLS:C4693552"],"synonyms":[{"name":"ECYT5","type":"related"},{"name":"EPO familial polycythemia","type":"exact"},{"name":"erythrocytosis, familial, 5","type":"exact"},{"name":"familial erythrocytosis 5","type":"related"},{"name":"familial polycythemia caused by mutation in EPO","type":"exact"}],"termid":"MONDO:0033483","xrefs":{"Monarch":{"xref_id":"0033483"}}}


id: MONDO:0035009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombotic disease","termid":"MONDO:0000831"},{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"isolated mesenteric vein thrombosis","secondary_identifiers":["icd11.foundation:213868120","GARD:22339","Orphanet:583861"],"termid":"MONDO:0035009","xrefs":{"Monarch":{"xref_id":"0035009"}}}


id: SO:0000934
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A miRNA target site is a binding site where the molecule is a micro RNA.","definition_xrefs":["FB:cds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_binding_site","termid":"SO:0001655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_target_site","synonyms":[{"name":"miRNA target site","type":"exact"}],"termid":"SO:0000934"}


id: GO:0090619
data:
  {"annotated_genes":["SJAG_02320","SJAG_01805","SJAG_01613","SJAG_01464","SJAG_05196","SJAG_02241","SJAG_02368","SJAG_04745","SJAG_03915","SJAG_01546"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91080,93583,93656,94556,96558,99012,99702,102602,106892,118627],"is_not":false,"summary":null,"term":"GO:0090619"}]},"cv_name":"cellular_component","definition":"Either of the ends of a meiotic spindle, a spindle that forms as part of meiosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.","definition_xrefs":["GOC:ha","PMID:18250200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole","termid":"GO:0000922"},{"relation_name":"part_of","term_name":"meiotic spindle","termid":"GO:0072687"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01464":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_03915":null,"SJAG_04745":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"meiotic spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090619","terms_by_termid":{"GO:0090619":null}}


id: PBO:0084510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of a complex (Isw1b) with Isw1p and Ioc2p; interacts directly with H3K36me3 nucleosomes through its PWWP domain to recruit the Isw1b complex to open reading frames in a Set2p-dependent manner; Isw1b exhibits nucleosome-stimulated ATPase activity and acts within coding regions to coordinate transcription elongation with termination and processing","termid":"PBO:0084510"}


id: PBO:0083419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YFR055W","termid":"PBO:0083419"}


id: PBO:0029144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029144"}


id: GO:0030301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"cholesterol transport","termid":"GO:0030301"}


id: PBO:0064865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R21 divergent transcript","termid":"PBO:0064865"}


id: PBO:0002994
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.77","termid":"PBO:0002994"}


id: PR:Q92351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein pcp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.06c","synonyms":[{"name":"Spom972h-pcp1","type":"exact"}],"termid":"PR:Q92351"}


id: MONDO:1011438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephroma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephroma, non-human animal","secondary_identifiers":["OMIA:001113"],"termid":"MONDO:1011438","xrefs":{"Monarch":{"xref_id":"1011438"}}}


id: PBO:0073921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 10","termid":"PBO:0073921"}


id: PBO:0054683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2091","termid":"PBO:0054683"}


id: MONDO:0020235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lens size anomaly (obsolete MONDO:0020235)","secondary_identifiers":["Orphanet:98652"],"termid":"MONDO:0020235","xrefs":{"Monarch":{"xref_id":"0020235"}}}


id: PR:Q9HDV8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proline-rich protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P19A11.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.02c","secondary_identifiers":["UniProtKB:Q9HDV8"],"synonyms":[{"name":"Spom972h-PROL1","type":"exact"}],"termid":"PR:Q9HDV8"}


id: MONDO:0015639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign partial epilepsy with secondarily generalized seizures in infancy is a rare infantile epilepsy syndrome characterized by seizures presenting with motion arrest and staring. They are followed by generalized tonic-clonic convulsions with normal interictal EEG and focal paroxysmal discharges, followed by generalization in ictal EEG. Seizures usually occur in clusters and are responsive to treatment. Psychomotor development is normal.","definition_xrefs":["Orphanet:166302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign non-familial infantile seizures","termid":"MONDO:0015637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign partial epilepsy with secondarily generalized seizures in infancy","secondary_identifiers":["UMLS:C4749728","GARD:20073","MEDGEN:1656339","icd11.foundation:413225821"],"termid":"MONDO:0015639","xrefs":{"Monarch":{"xref_id":"0015639"}}}


id: GO:0052841
data:
  {"annotated_genes":["SJAG_01154","SJAG_00244","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105000,114851,88510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052846"},{"annotations":[105001,88511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052847"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: bisdiphospho-1D-myo-inositol tetrakisphosphate + H2O = diphospho-1D-myo-inositol pentakisphosphate + phosphate.","definition_xrefs":["PMID:11502751","PMID:10827188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol bisdiphosphate tetrakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855165","Reactome:R-HSA-2023973"],"termid":"GO:0052841","terms_by_termid":{"GO:0052846":null,"GO:0052847":null}}


id: MONDO:0009895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Postaxial polydactyly-dental and vertebral anomalies syndrome is a rare, genetic, developmental defect during embryogenesis syndrome characterized by postaxial polydactyly and other abnormalities of the hands and feet (e.g. brachydactyly, broad toes), hypoplasia and fusion of the vertebral bodies, as well as dental abnormalities (fused teeth, macrodontia, hypodontia, short roots). There have been no further descriptions in the literature since 1977.","definition_xrefs":["Orphanet:2916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postaxial polydactyly-dental and vertebral anomalies syndrome","secondary_identifiers":["UMLS:C1849732","GARD:16614","MESH:C564880","MEDGEN:342342","OMIM:263540"],"synonyms":[{"name":"polydactyly, postaxial, with dental and vertebral anomalies","type":"related"}],"termid":"MONDO:0009895","xrefs":{"Monarch":{"xref_id":"0009895"}}}


id: GO:0075275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the development of a telium, which is a teliospore-bearing sorus of the rust fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telium development","termid":"GO:0075275"}


id: GO:0050141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nitroethane + H2O + O2 = acetaldehyde + nitrite + H2O2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nitroethane oxidase activity (obsolete GO:0050141)","termid":"GO:0050141"}


id: MONDO:0017448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital absence/hypoplasia of fingers excluding thumb (obsolete MONDO:0017448)","secondary_identifiers":["Orphanet:294990"],"synonyms":[{"name":"digits 2-5 hypodactyly","type":"exact"},{"name":"digits 2-5 oligodactyly","type":"exact"}],"termid":"MONDO:0017448","xrefs":{"Monarch":{"xref_id":"0017448"}}}


id: PBO:0052227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 5","termid":"PBO:0052227"}


id: GO:0102405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-taxifolin(1-) + O2 + NADPH(4-) + H+ = (+)-dihydromyricetin + NADP(3-) + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(+)-taxifolin 5'-hydroxylase activity","secondary_identifiers":["RHEA:61116","MetaCyc:RXN-13718"],"termid":"GO:0102405"}


id: MONDO:0015610
data:
  {"annotated_genes":["SJAG_00640","SJAG_05979","SJAG_04881","SJAG_04491","SJAG_00846","SJAG_00487"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87080,85119,87081,85118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012197"},{"annotations":[86707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[85761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"}]},"cv_name":"mondo","definition":"An instance of aplastic anemia that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aplastic anemia","termid":"MONDO:0015909"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00487":null,"SJAG_00640":null,"SJAG_00846":null,"SJAG_04491":null,"SJAG_04881":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"acquired aplastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20058","MEDGEN:543648","NANDO:2201277","Orphanet:164823","UMLS:C0271907","SCTID:55907008"],"synonyms":[{"name":"acquired aplastic anemia","type":"exact"},{"name":"rare acquired aplastic anaemia","type":"related"},{"name":"rare acquired aplastic anemia","type":"related"}],"termid":"MONDO:0015610","terms_by_termid":{"MONDO:0010438":null,"MONDO:0012197":null,"MONDO:0014166":null},"xrefs":{"Monarch":{"xref_id":"0015610"}}}


id: PBO:0089735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin-beta family nuclear import receptor Los1","termid":"PBO:0089735"}


id: GO:0042938
data:
  {"annotated_genes":["SJAG_01983","SJAG_05182","SJAG_02139"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[118140,118141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035442"}]},"cv_name":"biological_process","definition":"The directed movement of a dipeptide, a combination of two amino acids by means of a peptide (-CO-NH-) link, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01983":null,"SJAG_02139":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"dipeptide transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0042938","terms_by_termid":{"GO:0035442":null,"GO:0140206":null}}


id: PBO:0075247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 17","termid":"PBO:0075247"}


id: PBO:0057959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3681","termid":"PBO:0057959"}


id: PBO:0076902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 56, pseudogene","termid":"PBO:0076902"}


id: GO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from an oomycetes is received and converted into a molecular signal.","definition_xrefs":["PMID:15922649","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oomycetes","termid":"GO:0002239"},{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of oomycetes","termid":"GO:0002231"}


id: GO:0071374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a parathyroid hormone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to parathyroid hormone","termid":"GO:0071107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to parathyroid hormone stimulus","termid":"GO:0071374"}


id: PBO:0080650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDTC1 divergent transcript","termid":"PBO:0080650"}


id: MONDO:0017855
data:
  {"annotated_genes":["SJAG_02527","SJAG_02038","SJAG_04199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012650"},{"annotations":[86866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011686"},{"annotations":[85447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009973"}]},"cv_name":"mondo","definition":"T-B- severe combined immunodeficiency (SCID) is a group of rare monogenic primary immunodeficiency disorders characterized by a lack of functional peripheral T and B lymphocytes, resulting in recurrent early-onset severe respiratory viral, bacterial or fungal infections, diarrhea and failure to thrive. Hypersensitivity to ionizing radiation is a characteristic feature of some of its sub-types.","definition_xrefs":["Orphanet:317419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02038":null,"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B- severe combined immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21406","MEDGEN:1842252","UMLS:C5679893"],"synonyms":[{"name":"T-B- SCID","type":"exact"}],"termid":"MONDO:0017855","terms_by_termid":{"MONDO:0009973":null,"MONDO:0011686":null,"MONDO:0012650":null},"xrefs":{"Monarch":{"xref_id":"0017855"}}}


id: FYPO:0000775
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[119325,119329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[119319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null},"genotype_count":4,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_01787","SJAG_04551"],"single_locus_genotype_uniquenames":["Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pck2delta","pck1delta"],"synonyms":[{"name":"abnormal protein phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000775","terms_by_termid":{"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null}}


id: PATO:0000824
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000824 water taste (obsolete PATO:0000824)","termid":"PATO:0000824"}


id: MONDO:0005764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm composed of spindle to ovoid cells which have morphologic and immunophenotypic characteristics of follicular dendritic cells. It affects lymph nodes and other sites including the tonsils, gastrointestinal tract, spleen, liver, soft tissues, skin, and oral cavity. It usually behaves as a low grade sarcoma. Treatment options include complete surgical removal of the tumor with or without adjuvant chemotherapy or radiotherapy. Recurrences have been reported in up to half of the cases.","definition_xrefs":["NCIT:C9281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell sarcoma","termid":"MONDO:0004380"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated mesenchymal tumor","termid":"MONDO:0017345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"follicular dendritic cell sarcoma","secondary_identifiers":["NANDO:2200034","ICDO:9758/3","icd11.foundation:149373156","EFO:0007276","MEDGEN:220355","DOID:6262","Orphanet:86902","ONCOTREE:FDCS","GARD:19081","ICDO:9758/1","MESH:D054740","UMLS:C1260325","icd11.foundation:15445528"],"synonyms":[{"name":"follicular Dendritic cell sarcoma","type":"exact"},{"name":"follicular Dendritic cell sarcoma/tumor","type":"exact"},{"name":"follicular dendritic cell sarcoma","type":"exact"},{"name":"follicular dendritic cell tumor","type":"exact"},{"name":"follicular dendritic cell tumour","type":"exact"},{"name":"sarcoma of follicular dendritic cell","type":"exact"}],"termid":"MONDO:0005764","xrefs":{"Monarch":{"xref_id":"0005764"}}}


id: GO:0015032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of hemolymph proteins by cells of the fat body of holometabolous insects, during the final larval stage. Uptake of these proteins prepares the insect for pupation and metamorphosis, since insect pupae do not feed and therefore depend on material that has been accumulated during larval life.","definition_xrefs":["GOC:bf","PMID:10231363"],"gene_count":0,"genotype_count":0,"name":"obsolete storage protein import into fat body (obsolete GO:0015032)","synonyms":[{"name":"fat body metabolic process","type":"broad"},{"name":"fat body metabolism","type":"broad"},{"name":"fat body storage protein uptake","type":"exact"},{"name":"import of storage protein into fat body","type":"exact"},{"name":"storage protein import by fat body cells","type":"exact"},{"name":"storage protein import into fat body cells","type":"exact"},{"name":"storage protein transport into fat body cells","type":"exact"},{"name":"storage protein uptake into fat body cells","type":"exact"}],"termid":"GO:0015032"}


id: GO:0055035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer membrane of any thylakoid within a plastid.","definition_xrefs":["GOC:jid","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"is_a","term_name":"thylakoid membrane","termid":"GO:0042651"},{"relation_name":"part_of","term_name":"plastid thylakoid","termid":"GO:0031976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid thylakoid membrane","termid":"GO:0055035"}


id: FYECO:0000241
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Recovery from nitrogen starvation: cells are first grown in minimal medium containing no nitrogen for 28 days. This medium is then replaced with nitrogen containing minimal medium and cells are allowed to recover for 10-50 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen starvation and recovery","termid":"FYECO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"28 days nitrogen starvation followed by 10-50 hours recovery in minimal medium","termid":"FYECO:0000241"}


id: MONDO:0007528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, autosomal dominant, type unspecified","secondary_identifiers":["MESH:C562424","UMLS:C0220679","OMIM:130090","MEDGEN:65083"],"synonyms":[{"name":"EDS, unspecified type","type":"related"},{"name":"Ehlers-Danlos syndrome, Friedman-Harrod type","type":"related"},{"name":"Ehlers-Danlos syndrome, autosomal dominant, type unspecified","type":"exact"}],"termid":"MONDO:0007528","xrefs":{"Monarch":{"xref_id":"0007528"}}}


id: PBO:0083651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endocytic site protein required for stress-induced cell elongation; may link the polarization signal with the endocytic machinery to facilitate adaptive morphogenesis under conditions of stress; interacts with the polarity regulator Cdc42p, the SH3 domains of actin patch components and actin filaments; contains a Rho-GAP domain lacking the catalytic arginine finger, PXXP motifs and an xACT (F-actin binding) motif; promoter contains a consensus binding sequence for transcription factor Abf1p","termid":"PBO:0083651"}


id: GO:0048583
data:
  {"annotated_genes":["SJAG_00642","SJAG_04206","SJAG_03072","SJAG_03705","SJAG_01587","SJAG_04249","SJAG_00293","SJAG_00688","SJAG_02605","SJAG_03592","SJAG_01114","SJAG_03345","SJAG_01978","SJAG_02785","SJAG_01805","SJAG_00823","SJAG_03048","SJAG_00424","SJAG_00526","SJAG_03486","SJAG_00561","SJAG_01184","SJAG_06270","SJAG_06588","SJAG_03417","SJAG_00573","SJAG_01679","SJAG_00990","SJAG_04259","SJAG_03903","SJAG_03319","SJAG_00600","SJAG_00824","SJAG_00209","SJAG_01253","SJAG_03907","SJAG_04551","SJAG_03678","SJAG_01205","SJAG_02104","SJAG_01983","SJAG_04522","SJAG_02336","SJAG_02481","SJAG_00078","SJAG_00289","SJAG_00781","SJAG_03631","SJAG_04457","SJAG_00875","SJAG_04776","SJAG_03828","SJAG_03488","SJAG_02231","SJAG_03799","SJAG_00975","SJAG_03936","SJAG_01528","SJAG_04910","SJAG_01585","SJAG_03160","SJAG_03355","SJAG_01790","SJAG_05184","SJAG_02183","SJAG_00169","SJAG_03681","SJAG_04235","SJAG_02426","SJAG_04455","SJAG_02233","SJAG_00883","SJAG_00229","SJAG_05346","SJAG_00457","SJAG_00318","SJAG_00143","SJAG_06621","SJAG_01032","SJAG_01142","SJAG_02013","SJAG_00027","SJAG_02486","SJAG_03126","SJAG_03695","SJAG_00266","SJAG_03969","SJAG_02244","SJAG_01297","SJAG_01386","SJAG_02392","SJAG_06622","SJAG_02945","SJAG_01464","SJAG_00845","SJAG_02169","SJAG_01199","SJAG_01837","SJAG_01181","SJAG_00082","SJAG_03405","SJAG_03327","SJAG_03185","SJAG_02000","SJAG_01187","SJAG_04825","SJAG_02451","SJAG_04496","SJAG_00991","SJAG_02135","SJAG_04666","SJAG_05000","SJAG_03893","SJAG_03089","SJAG_04462","SJAG_03263","SJAG_02858","SJAG_05030","SJAG_01245","SJAG_03353","SJAG_03371","SJAG_00610","SJAG_06592","SJAG_02765","SJAG_02311","SJAG_00369","SJAG_02878","SJAG_01885","SJAG_04268","SJAG_03928","SJAG_04329","SJAG_02514","SJAG_01150","SJAG_01787","SJAG_03508","SJAG_02424","SJAG_02379","SJAG_03501","SJAG_04943","SJAG_03974","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108049,99392,107029,114058,90516,111752,115693,113570,103686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[116172,92547,100240,91883,107765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[115920,100795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[118111,95643,106846,99243,107407,103594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[102160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[77372,77869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[111552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[89224,101940,102636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[87995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[93994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[99245,95763,91457,94827,116873,118112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[106935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[93124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[72018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[71352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[99394,95431,107337,106896,92724,104842,92640,107031,72579,115696,91527,93259,109964,101074,90520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[111505,91033,105698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[72932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[113766,101251,109466,115921,118025,95889,99376,112949,87811,116275,73404,116837,106947,104933,98677,102805,93130,114370,117833,109062,73376,79753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[116066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"},{"annotations":[101943,110771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"},{"annotations":[87873,90561,92213,117704,89225,102637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[89050,116184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900039"},{"annotations":[117072,111829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[109978,93680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000781"},{"annotations":[107202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[113575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[116467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[111615,108736,108737,108739,112273,118078,108735,108738,108740,95049,108734,117166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[87932,90642,115380,114416,103496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[110318,89791,87326,93604,102181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[78186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[72855,69066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[110334,112653,76230,75101,76605,94114,72290,88099,95890,73859,75680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[90989,97543,106795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"},{"annotations":[69863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043609"},{"annotations":[102183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904547"},{"annotations":[72477,90704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000779"},{"annotations":[109112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"},{"annotations":[74533,80229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043408"},{"annotations":[101137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905325"},{"annotations":[70334,113619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006808"},{"annotations":[74555,69861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032483"},{"annotations":[89753,113158,104296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031029"},{"annotations":[107644,92691,93850,117593,115273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903432"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a response to a stimulus. 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id: GO:0032624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-20 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-20 production","secondary_identifiers":["GO:0072618","GO:0042237"],"synonyms":[{"name":"IL-20 production","type":"exact"},{"name":"ZCYTO10 production","type":"exact"},{"name":"interleukin-20 biosynthetic process","type":"narrow"},{"name":"interleukin-20 secretion","type":"narrow"}],"termid":"GO:0032624"}


id: PBO:0030156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated_cell","termid":"PBO:0030156"}


id: PBO:0030192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched_elongated_multinucleate_aseptate_vegetative_cell","termid":"PBO:0030192"}


id: MONDO:0004056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive or non-invasive papillary transitional cell carcinoma of the urinary bladder. It is classified as low - or high-grade. -- 2003","definition_xrefs":["NCIT:C7383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder papillary urothelial neoplasm","termid":"MONDO:0003442"},{"relation_name":"is_a","term_name":"bladder transitional cell carcinoma","termid":"MONDO:0005611"},{"relation_name":"is_a","term_name":"papillary transitional cell carcinoma","termid":"MONDO:0006350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder papillary urothelial carcinoma","secondary_identifiers":["DOID:6975","MEDGEN:309552","UMLS:C1518882"],"synonyms":[{"name":"bladder papillary urothelial carcinoma","type":"exact"},{"name":"bladder urothelial papillary carcinoma","type":"related"},{"name":"urinary bladder papillary transitional cell carcinoma","type":"exact"},{"name":"urothelial papillary carcinoma of the bladder","type":"exact"}],"termid":"MONDO:0004056","xrefs":{"Monarch":{"xref_id":"0004056"}}}


id: PBO:0002945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B gamma subunit (predicted)","termid":"PBO:0002945"}


id: PBO:0068253
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N5","termid":"PBO:0068253"}


id: MONDO:0016812
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  {"annotated_genes":["SJAG_03098","SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012994"},{"annotations":[84860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"}]},"cv_name":"mondo","definition":"Dopa-responsive dystonia (DRD) describes a group of neurometabolic disorders characterized by dystonia that typically shows diurnal fluctuations, that responds excellently to levodopa (L-dopa) and that is comprised of autosomal dominant dopa-responsive dystonia (DYT5a), autosomal recessive dopa-responsive dystonia (DYT5b) and dopa responsive dystonia due to sepiapterin reductase (SR) deficiency.","definition_xrefs":["Orphanet:255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03098":null,"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"dopa-responsive dystonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200885","SCTID:230332007","NCIT:C116719","GARD:12144","MESH:C538007","icd11.foundation:1534901505","NANDO:1200516"],"synonyms":[{"name":"DYT-GCH1 (subtype)","type":"related"},{"name":"DYT-SPR (subtype)","type":"related"},{"name":"DYT-TH (subtype)","type":"related"},{"name":"DYT5","type":"related"},{"name":"DYT5 dystonia","type":"exact"},{"name":"HPD with diurnal fluctuation","type":"exact"},{"name":"Segawa's disease","type":"exact"},{"name":"dopa-responsive dystonia","type":"exact"},{"name":"hereditary progressive dystonia with diurnal fluctuation","type":"exact"}],"termid":"MONDO:0016812","terms_by_termid":{"MONDO:0007495":null,"MONDO:0012994":null},"xrefs":{"Monarch":{"xref_id":"0016812"}}}


id: GO:0004318
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  {"annotated_genes":["SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59670],"is_not":false,"summary":null,"term":"GO:0004318"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2,3-saturated acyl-[ACP] + NAD+ = a (2E)-enoyl-[ACP] + H+ + NADH.","definition_xrefs":["RHEA:10240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enoyl-[acyl-carrier-protein] reductase activity (NAD(P)H)","termid":"GO:0016631"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"enoyl-[acyl-carrier-protein] reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:1.3.1.9","MetaCyc:ENOYL-ACP-REDUCT-NADH-RXN"],"synonyms":[{"name":"NADH-enoyl acyl carrier protein reductase activity","type":"related"},{"name":"NADH-specific enoyl-ACP reductase activity","type":"related"},{"name":"acyl-acyl-carrier-protein:NAD+ oxidoreductase","type":"related"},{"name":"enoyl-ACP reductase (NADH) activity","type":"related"},{"name":"enoyl-[acyl-carrier protein] reductase (NADH) activity","type":"related"},{"name":"enoyl-acyl-carrier-protein reductase (NADH)","type":"related"}],"termid":"GO:0004318","terms_by_termid":{"GO:0004318":null}}


id: PBO:0058504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5694","termid":"PBO:0058504"}


id: FYPO:0002539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm begins later than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein localization to nucleoplasm","termid":"FYPO:0002532"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm during cellular response to hydroxyurea","termid":"FYPO:0002537"},{"relation_name":"is_a","term_name":"delayed onset of protein localization to mitotic spindle","termid":"FYPO:0003226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea","synonyms":[{"name":"delayed onset of protein localisation to nucleoplasm during cellular response to hydroxyurea","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to HU","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"delayed protein localization to nucleoplasm during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002539"}


id: MONDO:0019418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-epilepsy-progressive joint contractures-dysmorphism syndrome is characterized by intellectual deficit, epilepsy, facial dysmorphism and progressive joint contractures. It has been described in two boys. Hypotonia and feeding problems at birth were also reported. The mode of transmission is X-linked.","definition_xrefs":["Orphanet:85319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability-epilepsy-progressive joint contractures-dysmorphism syndrome","secondary_identifiers":["UMLS:C4304917","GARD:19054","MEDGEN:930586"],"termid":"MONDO:0019418","xrefs":{"Monarch":{"xref_id":"0019418"}}}


id: PBO:0053148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 4","termid":"PBO:0053148"}


id: GO:0090202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation and maintenance of DNA loops that juxtapose sequentially separated regions of RNA polymerase II-transcribed genes.","definition_xrefs":["PMID:19933150","GOC:rb","PMID:19923429","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete gene looping (obsolete GO:0090202)","termid":"GO:0090202"}


id: PBO:0070639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 10","termid":"PBO:0070639"}


id: PBO:0084658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mismatch repair protein; forms dimers with Msh2p that mediate repair of insertion or deletion mutations and removal of nonhomologous DNA ends, contains a PCNA (Pol30p) binding motif required for genome stability","termid":"PBO:0084658"}


id: PBO:0116671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 6 interacting protein 1 pseudogene 2","termid":"PBO:0116671"}


id: MONDO:0003331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma that arises from the ovary and is characterized by the presence of tissues derived exclusively from one embryonic germ cell layer.","definition_xrefs":["NCIT:C7286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian teratoma","termid":"MONDO:0005602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian monodermal teratoma","secondary_identifiers":["MEDGEN:266265","DOID:5207","UMLS:C1302569"],"synonyms":[{"name":"monodermal teratoma","type":"exact"},{"name":"monodermal teratoma (morphologic abnormality)","type":"exact"},{"name":"ovarian monodermal teratoma","type":"exact"}],"termid":"MONDO:0003331","xrefs":{"Monarch":{"xref_id":"0003331"}}}


id: GO:0160077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a single lipid droplet is created from the fusion of two or more lipid droplets.","definition_xrefs":["PMID:34508658","PMID:36477540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid droplet organization","termid":"GO:0034389"},{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid droplet fusion","termid":"GO:0160077"}


id: GO:1902866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retina development in camera-type eye.","definition_xrefs":["PMID:16872597","GOC:TermGenie","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retina development in camera-type eye","synonyms":[{"name":"regulation of retina development in camera-style eye","type":"exact"},{"name":"regulation of retinal development","type":"related"}],"termid":"GO:1902866"}


id: GO:0018585
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: fluorene + 2 H+ + 2 e- + O2 = H2O + 9-fluorenol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete fluorene oxygenase activity (obsolete GO:0018585)","termid":"GO:0018585"}


id: PBO:0082216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 5 subunit of the 20S proteasome; involved in ubiquitin-dependent catabolism; human homolog is subunit zeta","termid":"PBO:0082216"}


id: PBO:0108537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 binding protein ortholog","termid":"PBO:0108537"}


id: MOD:00812
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to an O-fucosylserine.","definition_xrefs":["PubMed:15189151","PubMed:11067851","PubMed:11344537","PubMed:3311742","PubMed:12096136","Unimod:295#S","PubMed:1904059","RESID:AA0404","PubMed:1517205","PubMed:10734111","PubMed:3578767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"},{"relation_name":"is_a","term_name":"fucosylated","termid":"MOD:00614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-fucosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(6-deoxy-alpha-D-galactopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Fuc)","type":"exact"},{"name":"CARBOHYD O-linked (Fuc) serine","type":"exact"},{"name":"CARBOHYD O-linked (dHex)","type":"exact"},{"name":"Fucose","type":"related"},{"name":"O-fucosyl-L-serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O3-fucosylserine","type":"exact"},{"name":"OFucSer","type":"exact"},{"name":"dHex","type":"related"}],"termid":"MOD:00812"}


id: MONDO:0017895
data:
  {"annotated_genes":["SJAG_01970","SJAG_03453","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87097,85655,87098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"A papillary or follicular thyroid gland carcinoma with a genetic component that develops within the same family. Current studies suggest that it is inherited in an autosomal dominant pattern. It is often multifocal and bilateral and usually affects younger patients.","definition_xrefs":["NCIT:C118829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"differentiated thyroid carcinoma","termid":"MONDO:0015447"},{"relation_name":"is_a","term_name":"familial nonmedullary thyroid carcinoma","termid":"MONDO:0017896"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial papillary or follicular thyroid carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:319487","GARD:8488","MEDGEN:1681657","UMLS:C5191836"],"synonyms":[{"name":"FNMTC","type":"exact"},{"name":"familial nonmedullary thyroid gland carcinoma","type":"exact"},{"name":"familial pure nonmedullary thyroid carcinoma","type":"exact"}],"termid":"MONDO:0017895","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0017895"}}}


id: PBO:0085403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein of the Major Facilitator Superfamily (MFS); involved in amino acid uptake and drug sensitivity; VBA5 has a paralog, VBA3, that arose from a segmental duplication","termid":"PBO:0085403"}


id: GO:0046656
data:
  {"annotated_genes":["SJAG_01126","SJAG_02225","SJAG_04156","SJAG_00815","SJAG_03275","SJAG_02408","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57114,60606,68745,104586,105883,108142,112206],"is_not":false,"summary":null,"term":"GO:0046656"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of folic acid, pteroylglutamic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"folic acid metabolic process","termid":"GO:0046655"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042559","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"folic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Folic_acid"],"synonyms":[{"name":"folate biosynthesis","type":"exact"},{"name":"folate biosynthetic process","type":"exact"},{"name":"folic acid anabolism","type":"exact"},{"name":"folic acid biosynthesis","type":"exact"},{"name":"folic acid formation","type":"exact"},{"name":"folic acid synthesis","type":"exact"},{"name":"vitamin B9 biosynthesis","type":"exact"},{"name":"vitamin B9 biosynthetic process","type":"exact"},{"name":"vitamin M biosynthesis","type":"exact"},{"name":"vitamin M biosynthetic process","type":"exact"}],"termid":"GO:0046656","terms_by_termid":{"GO:0046656":null}}


id: PR:Q10988
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uve1 gene.","definition_xrefs":["UniProtKB:Q10988","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV-damage endonuclease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.09c","synonyms":[{"name":"Spom972h-uve1","type":"exact"},{"name":"UVDE (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10988"}


id: PR:O13686
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 59 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02195","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RWD, RING finger and WD repeat-containing protein C11E3.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.05","secondary_identifiers":["UniProtKB:O13686"],"synonyms":[{"name":"Spom972h-WDR59","type":"exact"}],"termid":"PR:O13686"}


id: PBO:0071268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 2","termid":"PBO:0071268"}


id: PBO:0078410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (CCC) 4-1","termid":"PBO:0078410"}


id: GO:0120319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (omega-1)-ethyl long-chain fatty acid + O2 + reduced [NADPH-hemoprotein reductase] = an (omega-1)-hydroxy-long-chain fatty acid + H+ + H2O + oxidized [NADPH-hemoprotein reductase. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["PMID:24242247","RHEA:60936","GOC:nhn","PMID:18577768","PMID:22772592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid omega-1 hydroxylase activity","termid":"GO:0120502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"long-chain fatty acid omega-1 hydroxylase activity","synonyms":[{"name":"cytochrome P450 fatty acid omega-1 hydroxylase activity","type":"related"}],"termid":"GO:0120319"}


id: PBO:0042090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 159","termid":"PBO:0042090"}


id: GO:0007231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated in response to osmotic change.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"osmosensory signaling pathway","synonyms":[{"name":"osmolarity sensing","type":"exact"},{"name":"osmolarity sensing signaling pathway","type":"exact"},{"name":"osmolarity sensing signalling pathway","type":"exact"},{"name":"osmosensory signal transduction","type":"exact"},{"name":"osmosensory signalling pathway","type":"exact"},{"name":"signal transduction during osmotic stress","type":"exact"}],"termid":"GO:0007231"}


id: GO:2000592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric DCT cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric DCT cell differentiation","synonyms":[{"name":"regulation of metanephric distal convoluted tubule cell differentiation","type":"exact"}],"termid":"GO:2000592"}


id: PBO:0016053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, Prp19 complex subunit Cdc5","termid":"PBO:0016053"}


id: SO:0001032
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a mitochondria.","direct_ancestors":[{"relation_name":"has_quality","term_name":"DNA","termid":"SO:0000352"},{"relation_name":"is_a","term_name":"mitochondrial_sequence","termid":"SO:0000737"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_DNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Mitochondrial_DNA"],"synonyms":[{"name":"mitochondrial DNA","type":"exact"},{"name":"mtDNA","type":"exact"}],"termid":"SO:0001032"}


id: MONDO:0020093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant form of isolated diffuse palmoplantar keratoderma.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant isolated diffuse palmoplantar keratoderma (obsolete MONDO:0020093)","secondary_identifiers":["Orphanet:98349"],"synonyms":[{"name":"autosomal dominant isolated diffuse palmoplantar hyperkeratosis","type":"exact"},{"name":"isolated diffuse palmoplantar keratoderma, autosomal dominant","type":"exact"}],"termid":"MONDO:0020093","xrefs":{"Monarch":{"xref_id":"0020093"}}}


id: FYPO:0004808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein present as aggregates of misfolded protein is greater than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah","PMID:25543137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during cellular response to heat","termid":"FYPO:0003152"},{"relation_name":"is_a","term_name":"increased cellular protein aggregate level","termid":"FYPO:0004180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular protein aggregate level during cellular response to heat","synonyms":[{"name":"increased cellular protein aggregate level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"increased cellular protein aggregate level during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0004808"}


id: FYECO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which vanoxerine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ vanoxerine","termid":"FYECO:0000347"}


id: MONDO:0002173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor that grows from a nerve or is composed of nerve cells and nerve fibers.","definition_xrefs":["NCIT:C3275"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"nervous system benign neoplasm","termid":"MONDO:0000648"},{"relation_name":"excluded_subClassOf","term_name":"nerve sheath neoplasm","termid":"MONDO:0002547"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroma","secondary_identifiers":["UMLS:C0027858","ICDO:9570/0","MESH:D009463","SCTID:443892003","ICD9:215.9","EFO:0009619","DOID:2001","MEDGEN:14352"],"termid":"MONDO:0002173","xrefs":{"Monarch":{"xref_id":"0002173"}}}


id: PBO:0111799
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family","termid":"PBO:0111799"}


id: GO:0009784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of a membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-histidine = ADP + a protein-L-histidine phosphate.","definition_xrefs":["GOC:lr","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein histidine kinase activity","termid":"GO:0004673"},{"relation_name":"is_a","term_name":"transmembrane receptor protein kinase activity","termid":"GO:0019199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0016740","GO:0003674","GO:0016301","GO:0003824","GO:0140096","GO:0004672"],"is_obsolete":false,"name":"transmembrane receptor histidine kinase activity","termid":"GO:0009784"}


id: PBO:0050726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 12","termid":"PBO:0050726"}


id: PBO:0043557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IV alpha 6 chain","termid":"PBO:0043557"}


id: GO:0018390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methyl esterification of peptidyl-glutamic acid or peptidyl-glutamine to form the derivative glutamic acid 5-methyl ester.","definition_xrefs":["RESID:AA0072"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-glutamic acid 5-methyl ester biosynthetic process from peptidyl-glutamic acid or peptidyl-glutamine (obsolete GO:0018390)","synonyms":[{"name":"peptidyl-L-glutamic acid 5-methyl ester anabolism from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamic acid 5-methyl ester formation from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamic acid 5-methyl ester synthesis from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"}],"termid":"GO:0018390"}


id: GO:0004035
data:
  {"annotated_genes":["SJAG_03108","SJAG_02853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71890,75440],"is_not":false,"summary":null,"term":"GO:0004035"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphate monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum.","definition_xrefs":["EC:3.1.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02853":null,"SJAG_03108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"alkaline phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ALKAPHOSPHA-RXN","Reactome:R-HSA-8878787"],"synonyms":[{"name":"alkaline phenyl phosphatase activity","type":"related"},{"name":"alkaline phosphohydrolase activity","type":"related"},{"name":"alkaline phosphomonoesterase activity","type":"related"},{"name":"glycerophosphatase activity","type":"broad"},{"name":"orthophosphoric-monoester phosphohydrolase (alkaline optimum)","type":"related"},{"name":"phosphate-monoester phosphohydrolase (alkaline optimum)","type":"related"},{"name":"phosphomonoesterase activity","type":"broad"}],"termid":"GO:0004035","terms_by_termid":{"GO:0004035":null}}


id: FYPO:0002027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms an actomyosin contractile ring that is not perpendicular to the long axis of the cell.","definition_xrefs":["PMID:8834798","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized actomyosin contractile ring","termid":"FYPO:0001369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000032","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"angled actomyosin contractile ring","synonyms":[{"name":"actomyosin contractile ring not orthogonal to long axis of cell","type":"exact"},{"name":"actomyosin contractile ring not perpendicular to long axis of cell","type":"related"},{"name":"angled actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"angled actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"angled cytokinetic contractile ring","type":"exact"},{"name":"angled mitotic contractile ring","type":"exact"},{"name":"tilted actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0002027"}


id: PBO:0034789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase Msp1","termid":"PBO:0034789"}


id: FYECO:0000022
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"P-factor, the mating pheromone secreted by P-cells, was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000022 absence of P-factor (obsolete FYECO:0000022)","termid":"FYECO:0000022"}


id: MONDO:0012550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iris pattern","secondary_identifiers":["UMLS:C1853115","OMIM:610744","MEDGEN:339907"],"synonyms":[{"name":"iris pattern","type":"exact"}],"termid":"MONDO:0012550","xrefs":{"Monarch":{"xref_id":"0012550"}}}


id: PBO:0077496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 215","termid":"PBO:0077496"}


id: PBO:0045704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 3","termid":"PBO:0045704"}


id: MOD:01838
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-lysinoalanine.","definition_xrefs":["PubMed:19155267","PubMed:2544544","RESID:AA0123#LYS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysinoalanine","termid":"MOD:01853"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysinoalanine (Lys)","synonyms":[{"name":"(2R,9S)-lysinoalanine","type":"exact"},{"name":"(2S)-2-amino-6-([(2R)-2-amino-2-carboxyethyl]amino)hexanoic acid","type":"exact"},{"name":"L-lysinoalanine","type":"exact"},{"name":"LAL","type":"exact"},{"name":"MOD_RES Lysino-D-alanine (Lys)","type":"exact"},{"name":"N-epsilon-(2-amino-2-carboxyethyl)-L-lysine","type":"exact"},{"name":"N6-(2-amino-2-carboxyethyl)-L-lysine","type":"exact"},{"name":"alaninolysine","type":"exact"},{"name":"lysino-D-alanine","type":"exact"}],"termid":"MOD:01838"}


id: MONDO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of mild to moderate high blood pressure that has no identifiable cause.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"essential hypertension","termid":"MONDO:0001134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign essential hypertension","secondary_identifiers":["ICD9:401.1","MEDGEN:56371","DOID:10913","SCTID:1201005","UMLS:C0155583"],"synonyms":[{"name":"benign essential hypertension","type":"exact"}],"termid":"MONDO:0001151","xrefs":{"Monarch":{"xref_id":"0001151"}}}


id: GO:0043338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate + CTP + H+ = CDP-2,3-bis-O-(geranylgeranyl)-sn-glycerol + diphosphate.","definition_xrefs":["PMID:10960477","RHEA:25690","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase activity","secondary_identifiers":["EC:2.7.7.67"],"synonyms":[{"name":"CDP-2,3-di-O-geranylgeranyl-sn-glycerol synthase","type":"broad"},{"name":"CTP:2,3-di-O-geranylgeranyl-sn-glycero-1-phosphate cytidyltransferase activity","type":"exact"}],"termid":"GO:0043338"}


id: GO:0038059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex containing two IkappaB kinase (IKK) alpha subunits.","definition_xrefs":["PMID:21173796","PMID:18626576","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IKKalpha-IKKalpha complex","synonyms":[{"name":"IKKalpha homodimer","type":"exact"},{"name":"IKKalpha homodimeric complex","type":"exact"},{"name":"IKKalpha-IKKalpha protein complex","type":"exact"},{"name":"IkappaB kinase alpha homodimer","type":"exact"},{"name":"IkappaB kinase-alpha homodimer","type":"exact"}],"termid":"GO:0038059"}


id: PBO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain protein","termid":"PBO:0001573"}


id: PBO:0064841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 12B pseudogene 1","termid":"PBO:0064841"}


id: GO:0061097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein tyrosine kinase activity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}


id: PBO:0028583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_vegetative_growth","termid":"PBO:0028583"}


id: PBO:0043344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor polyribonucleotide kinase subunit 1","termid":"PBO:0043344"}


id: PBO:0071154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 19","termid":"PBO:0071154"}


id: MONDO:0015062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low or intermediate grade tumor with neuroendocrine differentiation that arises from the stomach.","definition_xrefs":["NCIT:C95871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system neuroendocrine tumor, grade 1/2","termid":"MONDO:0000386"},{"relation_name":"is_a","term_name":"gastric neuroendocrine neoplasm","termid":"MONDO:0003111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric neuroendocrine tumor, well differentiated, low or intermediate grade","secondary_identifiers":["MEDGEN:474032","ONCOTREE:SWDNET","UMLS:C3272399"],"synonyms":[{"name":"GNET","type":"exact"},{"name":"gastric NET","type":"exact"},{"name":"gastric NET G1/2","type":"exact"},{"name":"gastric neuroendocrine tumor","type":"exact"},{"name":"gastric neuroendocrine tumour","type":"exact"},{"name":"gastric well differentiated endocrine tumor","type":"exact"},{"name":"gastric well differentiated endocrine tumor/carcinoma","type":"exact"},{"name":"gastric well differentiated endocrine tumour","type":"exact"},{"name":"well-differentiated neuroendocrine tumors of the stomach","type":"related"},{"name":"well-differentiated neuroendocrine tumours of the stomach","type":"related"}],"termid":"MONDO:0015062","xrefs":{"Monarch":{"xref_id":"0015062"}}}


id: GO:0031994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to insulin-like growth factor I.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin-like growth factor binding","termid":"GO:0005520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"insulin-like growth factor I binding","synonyms":[{"name":"IGF-I binding","type":"exact"}],"termid":"GO:0031994"}


id: PBO:0018017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription corepressor Ncb2 (predicted)","termid":"PBO:0018017"}


id: GO:0008948
data:
  {"annotated_genes":["SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118303],"is_not":false,"summary":null,"term":"GO:0008948"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + oxaloacetate = CO2 + pyruvate.","definition_xrefs":["RHEA:15641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02176":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxaloacetate decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.1.1.112","Reactome:R-HSA-9012016","Reactome:R-HSA-9861660","KEGG_REACTION:R00217","MetaCyc:OXALODECARB-RXN"],"synonyms":[{"name":"oxalacetic acid decarboxylase activity","type":"exact"},{"name":"oxalate beta-decarboxylase activity","type":"related"},{"name":"oxaloacetate beta-decarboxylase activity","type":"related"},{"name":"oxaloacetate carboxy-lyase (pyruvate-forming)","type":"exact"},{"name":"oxaloacetate carboxy-lyase activity","type":"related"}],"termid":"GO:0008948","terms_by_termid":{"GO:0008948":null}}


id: MONDO:0020387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"double outlet right ventricle","termid":"MONDO:0018089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"double outlet right ventricle with subpulmonary ventricular septal defect","secondary_identifiers":["UMLS:C1956412","MEDGEN:365502","GARD:19616","Orphanet:99045","SCTID:448794008","icd11.foundation:1963185163"],"synonyms":[{"name":"DORV with subpulmonary VSD","type":"exact"},{"name":"DORV-TGA","type":"exact"},{"name":"Double outlet right ventricle with transposition of the great arteries","type":"exact"},{"name":"Taussig-Bing syndrome","type":"exact"}],"termid":"MONDO:0020387","xrefs":{"Monarch":{"xref_id":"0020387"}}}


id: PBO:0051844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 1","termid":"PBO:0051844"}


id: MONDO:1011329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keratoconjunctivitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis, non-human animal","termid":"MONDO:1010330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratoconjunctivitis, non-human animal","termid":"MONDO:1011329","xrefs":{"Monarch":{"xref_id":"1011329"}}}


id: GO:0047391
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 1-alkyl-sn-glycero-3-phosphoethanolamine = ethanolamine + 1-alkyl-sn-glycerol 3-phosphate.","definition_xrefs":["EC:3.1.4.39","MetaCyc:3.1.4.39-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alkylglycerophosphoethanolamine phosphodiesterase activity","secondary_identifiers":["RHEA:15965"],"synonyms":[{"name":"1-alkyl-sn-glycero-3-phosphoethanolamine ethanolaminehydrolase activity","type":"related"},{"name":"lysophospholipase D activity","type":"related"}],"termid":"GO:0047391"}


id: PBO:0063989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 23","termid":"PBO:0063989"}


id: MONDO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete major affective disorder (obsolete MONDO:0000055)","termid":"MONDO:0000055","xrefs":{"Monarch":{"xref_id":"0000055"}}}


id: PR:Q9Y7L8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps001 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7L8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.06","synonyms":[{"name":"Spom972h-rps001","type":"exact"}],"termid":"PR:Q9Y7L8"}


id: PBO:0089861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex subunit, ATP-dependent RNA helicase Fal1 (conflicting process, human yeast)","termid":"PBO:0089861"}


id: GO:0044314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 27 of the ubiquitin monomers, is added to a protein.","definition_xrefs":["PMID:19345326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K27-linked ubiquitination","synonyms":[{"name":"protein K27-linked polyubiquitination","type":"exact"}],"termid":"GO:0044314"}


id: GO:0036043
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A dynamic, actin-rich projection extending from the surface of a migrating animal cell.","definition_xrefs":["PMID:19095735","PMID:12153987","PMID:11429692"],"gene_count":0,"genotype_count":0,"name":"obsolete microspike (obsolete GO:0036043)","synonyms":[{"name":"microspike","type":"exact"}],"termid":"GO:0036043"}


id: PBO:0040865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix ARNT like 2","termid":"PBO:0040865"}


id: GO:0030265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway that starts with an opsin being activated by a photon, and transmitting the signal through the Gq-mediated activation of phospholipase C (PLC). PLC hydrolyses phosphatidylinositol 4,5-bisphosphate (PIP2) into the second messengers inositol-1,4,5,-triphosphate (IP3) and diacylglycerol (DAG). The second messengers, including cGMP, activate channels that result in transmission of the light signal  through the synapses. Typical examples are rhabdomeric photoreceptors in the eyes of protostomes.","definition_xrefs":["PMID:22498302","PMID:8823931","PMID:19720651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"G protein-coupled opsin signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating opsin-mediated signaling pathway","synonyms":[{"name":"PLC-activating rhodopsin mediated signaling pathway","type":"narrow"},{"name":"phospholipase C-activating rhodopsin mediated G-protein coupled receptor signaling pathway","type":"narrow"},{"name":"phospholipase C-activating rhodopsin mediated signaling pathway","type":"narrow"},{"name":"rhodopsin mediated G protein signaling, coupled to IP3 second messenger","type":"narrow"},{"name":"rhodopsin mediated G protein signalling, coupled to IP3 second messenger","type":"narrow"},{"name":"rhodopsin mediated G-protein signaling, coupled to IP3 second messenger","type":"narrow"},{"name":"rhodopsin mediated G-protein signalling, coupled to IP3 second messenger","type":"narrow"}],"termid":"GO:0030265"}


id: GO:0048503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with any glycosylphosphatidylinositol anchor. GPI anchors serve to attach membrane proteins to the lipid bilayer of cell membranes.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI anchor binding (obsolete GO:0048503)","synonyms":[{"name":"GPI anchor binding","type":"exact"},{"name":"glycosylphosphatidylinositol binding","type":"exact"}],"termid":"GO:0048503"}


id: PBO:0077140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 1","termid":"PBO:0077140"}


id: PBO:0049916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes related family bHLH transcription factor with YRPW motif 1","termid":"PBO:0049916"}


id: PBO:0028231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level_during_cellular_response_to_salt_stress","termid":"PBO:0028231"}


id: MONDO:0027026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A verrucous carcinoma of the skin or mucosa that occurs in the anogenital region.","direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system cancer","termid":"MONDO:0002149"},{"relation_name":"is_a","term_name":"anogenital human papillomavirus infection","termid":"MONDO:0005647"},{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Buschke Lowenstein tumor","secondary_identifiers":["GARD:9663","SCTID:402910001","UMLS:C0276264","MEDGEN:473018","MESH:D062688","NCIT:C6371"],"synonyms":[{"name":"Buschke Lowenstein tumor","type":"exact"},{"name":"Buschke-Lowenstein tumor","type":"related"},{"name":"Buschke-Lowenstein tumour","type":"related"},{"name":"GCBL","type":"related"},{"name":"Giant condyloma Acuminatum","type":"related"},{"name":"Giant condyloma Acuminatums","type":"related"},{"name":"Giant condyloma of Buschke and Lowenstein","type":"related"},{"name":"Lowenstein tumor, Buschke","type":"related"},{"name":"anogenital type verrucous carcinoma","type":"related"},{"name":"condyloma Acuminatum, Giant","type":"related"},{"name":"condyloma Acuminatums, Giant","type":"related"},{"name":"giant condyloma acuminatum involving the prepuce and glans penis","type":"narrow"},{"name":"giant condyloma of Buschke and Lowenstein","type":"narrow"},{"name":"tumor, Buschke Lowenstein","type":"related"},{"name":"tumor, Buschke-Lowenstein","type":"related"}],"termid":"MONDO:0027026","xrefs":{"Monarch":{"xref_id":"0027026"}}}


id: GO:0042701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of progesterone, a steroid hormone, by the corpus luteum of the ovary and by the placenta.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"},{"relation_name":"part_of","term_name":"luteinization","termid":"GO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"progesterone secretion","termid":"GO:0042701"}


id: RO:0002586
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in breakdown of c if and only if the execution of p leads to c no longer being present at the end of p","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"RO:0002233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_breakdown_of","termid":"RO:0002586"}


id: MONDO:0017995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylocostal dysostosis-hypospadias-intellectual disability syndrome","secondary_identifiers":["MEDGEN:1665083","Orphanet:329252","UMLS:C4751002"],"termid":"MONDO:0017995","xrefs":{"Monarch":{"xref_id":"0017995"}}}


id: PBO:0031292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_phenotype","termid":"PBO:0031292"}


id: PBO:0055209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2634","termid":"PBO:0055209"}


id: PBO:0074760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 119","termid":"PBO:0074760"}


id: PBO:0090877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28","termid":"PBO:0090877"}


id: GO:1900125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hyaluronan biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide biosynthetic process","termid":"GO:0032885"},{"relation_name":"regulates","term_name":"hyaluronan biosynthetic process","termid":"GO:0030213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of hyaluronan biosynthetic process","synonyms":[{"name":"regulation of hyaluronan anabolism","type":"exact"},{"name":"regulation of hyaluronan biosynthesis","type":"exact"},{"name":"regulation of hyaluronan formation","type":"exact"},{"name":"regulation of hyaluronan synthesis","type":"exact"}],"termid":"GO:1900125"}


id: GO:0006244
data:
  {"annotated_genes":["SJAG_04487","SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[76072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide metabolic process","termid":"GO:0006220"},{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03676":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine nucleotide breakdown","type":"exact"},{"name":"pyrimidine nucleotide catabolism","type":"exact"},{"name":"pyrimidine nucleotide degradation","type":"exact"}],"termid":"GO:0006244","terms_by_termid":{"GO:0006256":null,"GO:0046081":null}}


id: GO:0004983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with neuropeptide Y to initiate a change in cell activity.","definition_xrefs":["PMID:9315606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neuropeptide Y receptor activity","termid":"GO:0004983"}


id: FYPO:0001813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to N-methyl-N'-nitro-N-nitrosoguanidine. Cells stop growing (and may die) at a concentration of N-methyl-N'-nitro-N-nitrosoguanidine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to N-methyl-N'-nitro-N-nitrosoguanidine","synonyms":[{"name":"hypersensitive to N-methyl-N'-nitro-N-nitrosoguanidine","type":"exact"},{"name":"sensitive to MNNG","type":"exact"},{"name":"sensitive to N-methyl-N'-nitro-N-nitrosoguanidine during mitotic cell cycle","type":"related"},{"name":"sensitive to N-methyl-N'-nitro-N-nitrosoguanidine during vegetative growth","type":"exact"},{"name":"sensitive to nitrosoguanidine","type":"exact"}],"termid":"FYPO:0001813"}


id: PBO:0088808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex associated protein Kti12","termid":"PBO:0088808"}


id: GO:0006479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein alkylation","termid":"GO:0008213"},{"relation_name":"is_a","term_name":"macromolecule methylation","termid":"GO:0043414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein methylation","secondary_identifiers":["Reactome:R-HSA-8876725"],"synonyms":[{"name":"protein amino acid methylation","type":"exact"}],"termid":"GO:0006479"}


id: FYPO:0005696
data:
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id: GO:1990058
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id: PBO:0066081
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id: PBO:0002919
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id: MOD:00850
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id: PBO:0108696
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id: PBO:0065216
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id: GO:0098813
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id: PBO:0090313
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id: GO:0016888
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id: FYPO:0000800
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id: PBO:0047232
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id: GO:0097067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroid hormone stimulus.","definition_xrefs":["GOC:sjw","PMID:9916872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to thyroid hormone","termid":"GO:0097066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to thyroid hormone stimulus","termid":"GO:0097067"}


id: MONDO:0019256
data:
  {"annotated_genes":["SJAG_03509","SJAG_02855","SJAG_03018","SJAG_01474","SJAG_04810","SJAG_04865","SJAG_00717","SJAG_03024"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[85857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008974"},{"annotations":[86549,86548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[86416,86417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[84872,84873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[85588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014793"},{"annotations":[87015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of sterol metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"steroid metabolism disease","termid":"MONDO:0045012"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01474":null,"SJAG_02855":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03509":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"sterol metabolism disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842986","UMLS:C5681277","GARD:18981","Orphanet:79226"],"synonyms":[{"name":"inborn error of sterol metabolic process","type":"exact"},{"name":"inborn sterol metabolic process disorder","type":"exact"},{"name":"rare inborn error of sterol metabolic process","type":"exact"}],"termid":"MONDO:0019256","terms_by_termid":{"MONDO:0008974":null,"MONDO:0009849":null,"MONDO:0010035":null,"MONDO:0010621":null,"MONDO:0011816":null,"MONDO:0012481":null,"MONDO:0014793":null},"xrefs":{"Monarch":{"xref_id":"0019256"}}}


id: MONDO:0018304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, underdiagnosed disorder in adults characterized by recurrent febrile rash, bone and/or joint pain, enlarged lymph nodes, fatigue, a monoclonal IgM component, leukocytosis and systemic inflammatory response.","definition_xrefs":["Orphanet:37748"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type IV hypersensitivity disease","termid":"MONDO:0002459"},{"relation_name":"excluded_subClassOf","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"excluded_subClassOf","term_name":"unexplained periodic fever syndrome","termid":"MONDO:0015158"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schnitzler syndrome","secondary_identifiers":["MESH:D019873","NORD:1696","MEDGEN:141892","SCTID:402415001","EFO:1001165","DOID:4371","icd11.foundation:1867840545","ICD9:708.8","MedDRA:10062908","GARD:12390","UMLS:C0524988"],"synonyms":[{"name":"chronic urticaria with gammapathy","type":"related"},{"name":"chronic urticaria with gammopathy","type":"exact"},{"name":"chronic urticaria with macroglobulinemia","type":"exact"}],"termid":"MONDO:0018304","xrefs":{"Monarch":{"xref_id":"0018304"}}}


id: GO:0060286
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cell motility due to the motion of one or more flagella.","definition_xrefs":["GOC:dph","GOC:mlg","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete flagellar cell motility (obsolete GO:0060286)","synonyms":[{"name":"flagellar cell motility","type":"exact"}],"termid":"GO:0060286"}


id: MONDO:0005256
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heart failure characterized by marked limitation in activity due to symptoms, even during less-than-ordinary activity, e.g. walking short distances (20b100 m). Patients with moderate heart failure are comfortable only at rest.","definition_xrefs":["EFO:0003148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symptomatic heart failure","termid":"MONDO:0005254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"moderate heart failure","secondary_identifiers":["Wikipedia:New_York_Heart_Association_Functional_Classification"],"termid":"MONDO:0005256","xrefs":{"Monarch":{"xref_id":"0005256"}}}


id: PBO:0018071
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exoribonuclease subunit Dis3","termid":"PBO:0018071"}


id: PBO:0087406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase; assists Cdc48p in the dislocation of misfolded, polyubiquitinated ERAD substrates that are subsequently delivered to the proteasome for degradation; also involved in the regulated destruction of resident ER membrane proteins, such as HMG-CoA reductase (Hmg1/2p) and cytoplasmic proteins (Fbp1p); role in mobilizing membrane bound transcription factors by regulated ubiquitin/proteasome-dependent processing (RUP)","termid":"PBO:0087406"}


id: FYPO:0004879
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) at the centromere central core.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin binding at centromere central core","termid":"FYPO:0004879"}


id: PBO:0058417
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4786","termid":"PBO:0058417"}


id: GO:1901554
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a paracetamol stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to paracetamol","synonyms":[{"name":"response to acetaminophen","type":"exact"}],"termid":"GO:1901554"}


id: PBO:0042007
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 62","termid":"PBO:0042007"}


id: GO:0061815
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ubiquitin units from Met1-linked (or linear) polyubiquitin chains.","definition_xrefs":["PMID:27702987","GOC:dph","PMID:26503766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type deubiquitinase activity","termid":"GO:0004843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0008233","GO:0016787","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"Met1-linked polyubiquitin deubiquitinase activity","secondary_identifiers":["Reactome:R-HSA-9818975"],"synonyms":[{"name":"Met1 linkage specific DUB","type":"exact"},{"name":"cysteine-type deubiquitinase activity, acting on linear ubiquitin","type":"exact"},{"name":"deubiquitinase, acting on linear ubiquitin","type":"broad"},{"name":"linear ubiquitin specific deubiquitinase activity","type":"exact"},{"name":"ubiquitinyl hydrolase activity, acting on linear ubiquitin","type":"exact"}],"termid":"GO:0061815"}


id: GO:1905590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a fibronectin fibril.","definition_xrefs":["GOC:TermGenie","PMID:20690820","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibronectin fibril organization","termid":"GO:1905590"}


id: GO:0019541
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propionate, the anion derived from propionic (propanoic) acid, a carboxylic acid important in the energy metabolism of ruminants.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"propionate metabolic process","synonyms":[{"name":"propanoate metabolic process","type":"exact"},{"name":"propanoate metabolism","type":"exact"},{"name":"propionate metabolism","type":"exact"}],"termid":"GO:0019541"}


id: MONDO:0005544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Age-related neuropathological condition with severe neuronal cell loss and gliosis in the hippocampus","definition_xrefs":["EFO:0005678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocampal sclerosis of aging","secondary_identifiers":["MEDGEN:1801569","UMLS:C5691287"],"termid":"MONDO:0005544","xrefs":{"Monarch":{"xref_id":"0005544"}}}


id: GO:0008289
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id: MONDO:0004972
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A neoplasm arising from the epithelium. It may be encapsulated or non-encapsulated but non-invasive. The neoplastic epithelial cells may or may not display cellular atypia or dysplasia. In the gastrointestinal tract, when dysplasia becomes severe it is sometimes called carcinoma in situ. Representative examples are pituitary gland adenoma, follicular adenoma of the thyroid gland, and adenomas (or adenomatous polyps) of the gastrointestinal tract.","definition_xrefs":["NCIT:C2855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"adenoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:443416007","ICDO:8140/0","EFO:0000232","UMLS:C0001430","MESH:D000236","MEDGEN:125","DOID:657"],"synonyms":[{"name":"acinar cell adenoma","type":"narrow"},{"name":"acinar cell adenoma (morphologic abnormality)","type":"narrow"},{"name":"acinic cell adenoma","type":"exact"},{"name":"adenoma","type":"exact"},{"name":"adenoma, benign","type":"narrow"},{"name":"adenomas","type":"exact"}],"termid":"MONDO:0004972","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0004972"}}}


id: PBO:0067361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 460, pseudogene","termid":"PBO:0067361"}


id: PBO:0049626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 29","termid":"PBO:0049626"}


id: PBO:0044228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin pseudogene 2","termid":"PBO:0044228"}


id: GO:1905320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal stem cell migration.","definition_xrefs":["PMID:26846297","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"mesenchymal stem cell migration","termid":"GO:1905319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal stem cell migration","termid":"GO:1905320"}


id: GO:0035519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 29 of the ubiquitin monomers, is added to a protein. K29-linked ubiquitination targets the substrate protein for degradation.","definition_xrefs":["PMID:17028573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K29-linked ubiquitination","synonyms":[{"name":"protein K29-linked polyubiquitination","type":"exact"}],"termid":"GO:0035519"}


id: PBO:0004001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein modifier Ned8","termid":"PBO:0004001"}


id: MONDO:0030934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 64","secondary_identifiers":["UMLS:C5543067","MEDGEN:1784554","GARD:16478","OMIM:619188"],"synonyms":[{"name":"MRD64","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 64","type":"exact"},{"name":"mental retardation, autosomal dominant 64","type":"exact"}],"termid":"MONDO:0030934","xrefs":{"Monarch":{"xref_id":"0030934"}}}


id: FYPO:0008038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in mitosis in which trimethylation of lysine at position 4 of histone H3 does not occur.","direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K4 trimethylation during vegetative growth","termid":"FYPO:0004126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone H3-K4 trimethylation during mitosis","termid":"FYPO:0008038"}


id: MONDO:0004690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a tonsillar fossa.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonsil cancer","termid":"MONDO:0006998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"tonsillar fossa cancer","secondary_identifiers":["UMLS:C0153384","ICD9:146.1","DOID:8969","MEDGEN:509269","ICD10CM:C09.0","SCTID:363394001"],"synonyms":[{"name":"cancer of tonsillar fossa","type":"exact"},{"name":"malignant neoplasm of tonsillar fossa","type":"exact"},{"name":"malignant tonsillar fossa neoplasm","type":"exact"},{"name":"malignant tumor of tonsillar fossa","type":"exact"},{"name":"malignant tumour of tonsillar fossa","type":"exact"},{"name":"tonsillar fossa cancer","type":"exact"}],"termid":"MONDO:0004690","xrefs":{"Monarch":{"xref_id":"0004690"}}}


id: PBO:0084062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of the SEA complex, a coatomer-related complex that associates dynamically with the vacuole; Iml1p functions in the SEACIT complex as a GAP for the Rag family GTPase Gtr1p (EGOC subunit), resulting in the inhibition of TORC1 signaling in response to amino acid deprivation; the Iml1p/SEACIT complex is required for non-nitrogen-starvation (NNS)-induced autophagy","termid":"PBO:0084062"}


id: GO:0009853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved. The substrate is glycolate formed in large quantities in chloroplasts from 2-phosphoglycolate generated from ribulose 1,5-bisphosphate by the action of ribulose-bisphosphate carboxylase; the glycolate enters the peroxisomes where it is converted by glycolate oxidase to glyoxylate which undergoes transamination to glycine. This then passes into the mitochondria where it is decarboxylated forming one molecule of serine for every two molecules of glycine. This pathway also exists in photosynthetic bacteria.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic compound salvage","termid":"GO:0043094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photorespiration","secondary_identifiers":["MetaCyc:PWY-181","Wikipedia:Photorespiration"],"synonyms":[{"name":"photorespiratory pathway","type":"exact"}],"termid":"GO:0009853"}


id: GO:0061919
data:
  {"annotated_genes":["SJAG_00029","SJAG_03136","SJAG_04991","SJAG_05184","SJAG_03851","SJAG_00850","SJAG_04860","SJAG_02640","SJAG_01876","SJAG_01367","SJAG_03435","SJAG_02441","SJAG_04219","SJAG_01073","SJAG_00079","SJAG_03718","SJAG_05210","SJAG_00355","SJAG_01184","SJAG_02525","SJAG_05346","SJAG_04496","SJAG_04435","SJAG_06309","SJAG_00053","SJAG_05261","SJAG_02433","SJAG_01509","SJAG_01283","SJAG_02100","SJAG_03467","SJAG_04021","SJAG_00059","SJAG_04655","SJAG_01561","SJAG_04502","SJAG_02852","SJAG_00115","SJAG_02655","SJAG_00704","SJAG_01135","SJAG_02315","SJAG_00820","SJAG_02414","SJAG_02699","SJAG_03371","SJAG_05289","SJAG_00732","SJAG_00645","SJAG_00380","SJAG_00457","SJAG_01716","SJAG_04759","SJAG_04837","SJAG_04963","SJAG_01382","SJAG_01722","SJAG_00763","SJAG_00284","SJAG_02539","SJAG_04023","SJAG_04232","SJAG_05245","SJAG_01251","SJAG_01274","SJAG_04294","SJAG_01783","SJAG_04552","SJAG_01467","SJAG_00169","SJAG_05017","SJAG_00004","SJAG_01311","SJAG_02432","SJAG_01415","SJAG_03170","SJAG_00824","SJAG_00974","SJAG_02723","SJAG_03799","SJAG_00114","SJAG_03345","SJAG_03100","SJAG_02765","SJAG_00724","SJAG_04249","SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035973"},{"annotations":[92706,71970,103381,94419,72066,71875,79504,70553,76701,80183,60099,104403,72409,70213,78567,71271,79381,73052,78232,79526,76456],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000045"},{"annotations":[71878,70215,75322],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097352"},{"annotations":[94420],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[89400,95306,107422,97431,74381,60370,79533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006914"},{"annotations":[74312,79600,73265,71876,72845,71615,78568,95233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000422"},{"annotations":[72848,78569,73267,71880,79602,71617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[104700,98910,90796,93330,104768,76990,88455,88001,110070,111311,103532,114954,109621,75795,102328,97106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016236"},{"annotations":[71971,72873,79758,76702,94763,79527,92708,110455,76457,72333,60431,94423,79382,72410,114327,76688,115016,73053,89759,70214,99783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000423"},{"annotations":[76228,72288],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010507"},{"annotations":[106451],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0016242"},{"annotations":[99203,79596,108360,71611,73261,78564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044804"},{"annotations":[71616,79601,71272,77038,71972,72846,79506,73266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000425"},{"annotations":[79503,70066,79525,76687,79380,72408,71969,72872,73051,76699,72843,74199,71134,79757,71873,72332,73159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"},{"annotations":[108361,108451],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000786"},{"annotations":[97420],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[109467,79751,73373,98678,73400,99247,111635,114372],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010508"},{"annotations":[68697],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903599"},{"annotations":[75097,106060],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0016239"},{"annotations":[89309],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140501"},{"annotations":[65685,72411,79383,79528,78158,65823],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010506"},{"annotations":[72875,72412,90204,79509,72847,79760,74313,110456,79529,108362,99204,104174,116387,77899,76689,79384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061709"},{"annotations":[79502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034517"}]},"cv_name":"biological_process","definition":"A cellular process involving delivery of a portion of the cytoplasm to lysosomes or to the plant or fungal vacuole that does not involve direct transport through the endocytic or vacuolar protein sorting (Vps) pathways. This process typically leads to degradation of the cargo; however, it can also be used to deliver resident proteins, such as in the cytoplasm-to-vacuole targeting (Cvt) pathway.","definition_xrefs":["PMID:22966490","PMID:28596378","PMID:21997368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":87,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00029":null,"SJAG_00053":null,"SJAG_00059":null,"SJAG_00079":null,"SJAG_00114":null,"SJAG_00115":null,"SJAG_00169":null,"SJAG_00284":null,"SJAG_00355":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00645":null,"SJAG_00704":null,"SJAG_00724":null,"SJAG_00732":null,"SJAG_00763":null,"SJAG_00820":null,"SJAG_00824":null,"SJAG_00850":null,"SJAG_00974":null,"SJAG_01073":null,"SJAG_01135":null,"SJAG_01184":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01311":null,"SJAG_01367":null,"SJAG_01382":null,"SJAG_01415":null,"SJAG_01467":null,"SJAG_01509":null,"SJAG_01561":null,"SJAG_01716":null,"SJAG_01722":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02100":null,"SJAG_02315":null,"SJAG_02414":null,"SJAG_02432":null,"SJAG_02433":null,"SJAG_02441":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02699":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_02852":null,"SJAG_03100":null,"SJAG_03136":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03371":null,"SJAG_03435":null,"SJAG_03467":null,"SJAG_03718":null,"SJAG_03799":null,"SJAG_03851":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04249":null,"SJAG_04294":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04552":null,"SJAG_04655":null,"SJAG_04759":null,"SJAG_04837":null,"SJAG_04860":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05000":null,"SJAG_05017":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_05245":null,"SJAG_05261":null,"SJAG_05289":null,"SJAG_05346":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"process utilizing autophagic mechanism","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0061919","terms_by_termid":{"GO:0000045":null,"GO:0000422":null,"GO:0000423":null,"GO:0000425":null,"GO:0006914":null,"GO:0010506":null,"GO:0010507":null,"GO:0010508":null,"GO:0016236":null,"GO:0016239":null,"GO:0016240":null,"GO:0016242":null,"GO:0034517":null,"GO:0034727":null,"GO:0035973":null,"GO:0044804":null,"GO:0061709":null,"GO:0061723":null,"GO:0097352":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null,"GO:2000786":null}}


id: SO:0001184
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence composed of peptide nucleic acid (CHEBI:48021), a chemical consisting of nucleobases bound to a backbone composed of repeating N-(2-aminoethyl)-glycine units linked by peptide bonds. The purine and pyrimidine bases are linked to the backbone by methylene carbonyl bonds.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNA","synonyms":[{"name":"peptide nucleic acid","type":"related"}],"termid":"SO:0001184"}


id: GO:0035184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a phosphate group to a threonine residue of a histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone threonine kinase activity (obsolete GO:0035184)","synonyms":[{"name":"histone-threonine kinase activity","type":"exact"}],"termid":"GO:0035184"}


id: FYPO:0006734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins begins later than normal.","definition_xrefs":["PomBase:mah","PMID:22718908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein localization to chromatin at replication origin","synonyms":[{"name":"delayed onset of protein localisation to chromatin at replication origin","type":"exact"},{"name":"delayed onset of protein localization to chromatin at replication origins during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to chromatin at replication origins during vegetative growth","type":"exact"},{"name":"delayed protein localization to chromatin at replication origin","type":"exact"}],"termid":"FYPO:0006734"}


id: MONDO:1012675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary osteochondrodysplasia that occurs in dogs due to a mutation in the SLC13A1 gene.","definition_xrefs":["PMID:23300579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, dog","termid":"MONDO:1011194"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrodysplasia, SLC13A1-related, dog","secondary_identifiers":["OMIA:001400-9615"],"synonyms":[{"name":"chondrodysplasia, SLC13A1-related in Canis lupus familiaris (dog)","type":"exact"},{"name":"osteochondrodysplasia, dog","type":"related"},{"name":"pseudoachondroplastic dysplasia, dog","type":"related"}],"termid":"MONDO:1012675","xrefs":{"Monarch":{"xref_id":"1012675"}}}


id: PR:Q9P6P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp36 gene.","definition_xrefs":["UniProtKB:Q9P6P2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA biogenesis protein rrp36 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.04","synonyms":[{"name":"Spom972h-rrp36","type":"exact"},{"name":"ribosomal RNA-processing protein 36 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P2"}


id: GO:1990429
data:
  {"annotated_genes":["SJAG_02693","SJAG_00891","SJAG_03324","SJAG_05315"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70363,75646,96262,96751],"is_not":false,"summary":null,"term":"GO:1990429"}]},"cv_name":"cellular_component","definition":"A protein complex responsible for transporting proteins into the peroxisomal matrix. An example of this complex is Pex14 found in S. cerevisae which has 9 core components and 12 transient interaction partners.","definition_xrefs":["PMID:20154681","PMID:22375831","PMID:12667447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00891":null,"SJAG_02693":null,"SJAG_03324":null,"SJAG_05315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"peroxisomal importomer complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1990415"],"synonyms":[{"name":"Pex14 complex","type":"narrow"},{"name":"Pex17p-Pex14p docking complex","type":"related"},{"name":"peroxisomal import pore","type":"exact"},{"name":"peroxisomal protein import machinery","type":"exact"}],"termid":"GO:1990429","terms_by_termid":{"GO:1990429":null}}


id: PBO:0045637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 49 (pseudogene)","termid":"PBO:0045637"}


id: PBO:0067847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 149","termid":"PBO:0067847"}


id: PR:O13905
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSD domain-containing protein C22A12.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.14c","synonyms":[{"name":"Spom972h-SPAC22A12.14c","type":"exact"}],"termid":"PR:O13905"}


id: PBO:0071016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 18","termid":"PBO:0071016"}


id: GO:0038091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a platelet-derived growth factor receptor (PDGFR) on the surface of a cell, which activates or increases the frequency, rate or extent of cell proliferation.","definition_xrefs":["GOC:signaling","PMID:17470632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","termid":"GO:0038086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway","synonyms":[{"name":"VEGF-A-induced cell proliferation","type":"narrow"},{"name":"positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signalling pathway","type":"exact"},{"name":"positive regulation of cell proliferation by VEGF/PDGFR signaling pathway","type":"exact"}],"termid":"GO:0038091"}


id: GO:0042407
data:
  {"annotated_genes":["SJAG_02002","SJAG_03282","SJAG_04237","SJAG_05241","SJAG_02501","SJAG_02028"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74802,78317,78506,89282,101500,107115],"is_not":false,"summary":null,"term":"GO:0042407"}]},"cv_name":"biological_process","definition":"The assembly of cristae, the inwards folds of the inner mitochondrial membrane.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane organization","termid":"GO:0007007"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02002":null,"SJAG_02028":null,"SJAG_02501":null,"SJAG_03282":null,"SJAG_04237":null,"SJAG_05241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005","GO:0061024"],"is_obsolete":false,"name":"cristae formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8949613"],"termid":"GO:0042407","terms_by_termid":{"GO:0042407":null}}


id: GO:0003079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of natriuresis.","definition_xrefs":["GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of natriuresis (obsolete GO:0003079)","synonyms":[{"name":"positive regulation of natriuresis","type":"exact"}],"termid":"GO:0003079"}


id: PBO:0045274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 25","termid":"PBO:0045274"}


id: PBO:0066695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability 1","termid":"PBO:0066695"}


id: GO:0052366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of xylan within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of xylan in other organism involved in symbiotic interaction (obsolete GO:0052366)","synonyms":[{"name":"catabolism by organism of xylan in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052366"}


id: PBO:0043389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLYBL antisense RNA 3","termid":"PBO:0043389"}


id: MONDO:1010529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, pig","secondary_identifiers":["OMIA:000197-9823"],"termid":"MONDO:1010529","xrefs":{"Monarch":{"xref_id":"1010529"}}}


id: GO:1903089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of 5-amino-1-ribofuranosylimidazole-4-carboxamide from one side of a membrane to the other.","definition_xrefs":["GO_REF:0000066","GOC:TermGenie","PMID:24778186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"5-amino-1-ribofuranosylimidazole-4-carboxamide transmembrane transporter activity","synonyms":[{"name":"acadesine transporter activity","type":"exact"}],"termid":"GO:1903089"}


id: GO:0010037
data:
  {"annotated_genes":["SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071244"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon dioxide (CO2) stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbon dioxide","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0010037","terms_by_termid":{"GO:0071244":null}}


id: GO:1900090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inositol biosynthetic process.","definition_xrefs":["PMID:22307851","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol biosynthetic process","termid":"GO:1900088"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"inositol biosynthetic process","termid":"GO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of inositol biosynthetic process","synonyms":[{"name":"activation of inositol anabolism","type":"exact"},{"name":"activation of inositol biosynthesis","type":"exact"},{"name":"activation of inositol biosynthetic process","type":"narrow"},{"name":"activation of inositol formation","type":"exact"},{"name":"activation of inositol synthesis","type":"exact"},{"name":"activation of myo-inositol biosynthesis","type":"narrow"},{"name":"activation of myo-inositol biosynthetic process","type":"narrow"},{"name":"activation of vitamin Bh biosynthesis","type":"exact"},{"name":"activation of vitamin Bh biosynthetic process","type":"exact"},{"name":"positive regulation of inositol anabolism","type":"exact"},{"name":"positive regulation of inositol biosynthesis","type":"exact"},{"name":"positive regulation of inositol formation","type":"exact"},{"name":"positive regulation of inositol synthesis","type":"exact"},{"name":"positive regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"positive regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"positive regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"positive regulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"up regulation of inositol anabolism","type":"exact"},{"name":"up regulation of inositol biosynthesis","type":"exact"},{"name":"up regulation of inositol biosynthetic process","type":"exact"},{"name":"up regulation of inositol formation","type":"exact"},{"name":"up regulation of inositol synthesis","type":"exact"},{"name":"up regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"up regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"up regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"up regulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"up-regulation of inositol anabolism","type":"exact"},{"name":"up-regulation of inositol biosynthesis","type":"exact"},{"name":"up-regulation of inositol biosynthetic process","type":"exact"},{"name":"up-regulation of inositol formation","type":"exact"},{"name":"up-regulation of inositol synthesis","type":"exact"},{"name":"up-regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"up-regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"up-regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"up-regulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"upregulation of inositol anabolism","type":"exact"},{"name":"upregulation of inositol biosynthesis","type":"exact"},{"name":"upregulation of inositol biosynthetic process","type":"exact"},{"name":"upregulation of inositol formation","type":"exact"},{"name":"upregulation of inositol synthesis","type":"exact"},{"name":"upregulation of myo-inositol biosynthesis","type":"narrow"},{"name":"upregulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"upregulation of vitamin Bh biosynthesis","type":"exact"},{"name":"upregulation of vitamin Bh biosynthetic process","type":"exact"}],"termid":"GO:1900090"}


id: MONDO:0968987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare closed lipomatous, dysraphic malformation of the lower spinal cord characterized by extramedullary lipomatous mass attached to the conus region. The conus is dysplastic and poorly delineated. Various morphological subtypes are recognized. Possible symptoms include bowel and bladder dysfunction and neuro-orthopedic deformity of the lower limbs.","definition_xrefs":["Orphanet:645297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conus spinal cord lipoma","termid":"MONDO:0958350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"extramedullary conus spinal cord lipoma","secondary_identifiers":["UMLS:C5816726","MEDGEN:1853155"],"termid":"MONDO:0968987","xrefs":{"Monarch":{"xref_id":"0968987"}}}


id: GO:0035181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Digging into the substrate by non-feeding larvae in search for food-free sites suitable for pupation.","definition_xrefs":["PMID:12848939","PMID:12848927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval locomotory behavior","termid":"GO:0008345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval burrowing behavior","synonyms":[{"name":"larval burrowing behaviour","type":"exact"}],"termid":"GO:0035181"}


id: MOD:01731
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01731"}


id: GO:0018518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6-dihydroxy-3-methyl-5,6-dihydroquinolin-2(1H)-one + NAD+ = 5,6-dihydroxy-3-methyl-2-oxo-1,2-dihydroquinoline + H+ + NADH.","definition_xrefs":["EC:1.3.1.65","RHEA:24556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"5,6-dihydroxy-3-methyl-2-oxo-1,2,5,6-tetrahydroquinoline dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-643","UM-BBD_reactionID:r0053","KEGG_REACTION:R05312"],"synonyms":[{"name":"5,6-dihydrodiol-3-methyl-2-oxo-1,2-dihydroquinoline dehydrogenase","type":"related"},{"name":"5,6-dihydroxy-3-methyl-2-oxo-1,2,5,6-tetrahydroquinoline:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018518"}


id: PBO:0080860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 1","termid":"PBO:0080860"}


id: GO:0045145
data:
  {"annotated_genes":["SJAG_01648","SJAG_05280"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72356,96927],"is_not":false,"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of nucleotides (such as mononucleotides or dinucleotides) from a free 5' terminus of a single-stranded DNA molecule.","definition_xrefs":["GOC:ai","GOC:elh","PMID:20086101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA exodeoxyribonuclease activity","termid":"GO:0008297"},{"relation_name":"is_a","term_name":"5'-3' DNA exonuclease activity","termid":"GO:0035312"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01648":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824","GO:0004527","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"single-stranded DNA 5'-3' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.11.4"],"synonyms":[{"name":"single-stranded DNA specific 5'-3' exodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific 5'-3' exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0045145","terms_by_termid":{"GO:0045145":null}}


id: PBO:0031506
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_leptomycin_B","termid":"PBO:0031506"}


id: SO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methylaminomethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methylaminomethyluridine","secondary_identifiers":["RNAMOD:072"],"synonyms":[{"name":"5-methylaminomethyluridine","type":"exact"},{"name":"five methylaminomethyluridine","type":"exact"},{"name":"mnm5U","type":"exact"}],"termid":"SO:0001364"}


id: PBO:0054102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1461","termid":"PBO:0054102"}


id: PBO:0050962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 4 (gene/pseudogene)","termid":"PBO:0050962"}


id: PBO:0044612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 13 pseudogene 3","termid":"PBO:0044612"}


id: GO:0008913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a fatty acyl-[ACP] + an alpha-Kdo-(2->4)-alpha-Kdo-(2->6)-lipid IVA = an alpha-Kdo-(2->4)-alpha-Kdo-(2->6)-(acyl)-lipid IVA + holo-[ACP].","definition_xrefs":["PMID:18656959","EC:2.3.1.241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"Kdo2-lipid IVA acyltransferase activity","synonyms":[{"name":"(Kdo)2-lipid IVA lauroyltransferase","type":"related"},{"name":"Kdo2-lipid IVA lauroyltransferase","type":"related"},{"name":"alpha-Kdo-(2->4)-alpha-(2->6)-lipid IVA lauroyltransferase","type":"related"},{"name":"lauroyl transferase activity","type":"related"},{"name":"lauroyltransferase activity","type":"related"}],"termid":"GO:0008913"}


id: PBO:0080815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6 pseudogene 5","termid":"PBO:0080815"}


id: MOD:01747
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01747"}


id: MONDO:0003587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm arising from adipocytes, that occurs in children. The tumor maybe one of several histologic types including well-differentiated, dedifferentiated, myxoid/round cell, and pleomorphic liposarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric liposarcoma","secondary_identifiers":["NCIT:C8091","DOID:5695","UMLS:C0279984","MEDGEN:83580","NANDO:2200065"],"synonyms":[{"name":"childhood liposarcoma","type":"exact"},{"name":"liposarcoma","type":"broad"},{"name":"pediatric liposarcoma","type":"exact"}],"termid":"MONDO:0003587","xrefs":{"Monarch":{"xref_id":"0003587"}}}


id: PBO:0075490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily E member 3, pseudogene","termid":"PBO:0075490"}


id: PBO:0065557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTGES2 antisense RNA 1 (head to head)","termid":"PBO:0065557"}


id: PR:Q76PC3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mme1 gene.","definition_xrefs":["UniProtKB:Q76PC3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C1442.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.03","synonyms":[{"name":"Spom972h-mme1","type":"exact"}],"termid":"PR:Q76PC3"}


id: PBO:0063686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pepsinogen B, pseudogene","termid":"PBO:0063686"}


id: FYPO:0006928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which one or both nuclear membrane(s) form blebs. Membrane blebbing usually leads to decreases in nuclear size and the nucleus:cytoplasm volume ratio.","definition_xrefs":["PMID:31015410","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"nuclear membrane blebbing","synonyms":[{"name":"nuclear envelope blebbing","type":"related"},{"name":"nuclear membrane blebbing during mitotic cell cycle","type":"related"},{"name":"nuclear membrane blebbing during vegetative growth","type":"exact"}],"termid":"FYPO:0006928"}


id: GO:1900860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of brevianamide F biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of brevianamide F biosynthetic process (obsolete GO:1900860)","synonyms":[{"name":"up regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"up-regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"upregulation of brevianamide F biosynthetic process","type":"exact"}],"termid":"GO:1900860"}


id: GO:0034144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 4 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 4 signaling pathway","termid":"GO:0034143"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 4 signaling pathway","synonyms":[{"name":"negative regulation of TLR4 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034144"}


id: GO:0141204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dipeptide from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["PMID:38507452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"},{"relation_name":"is_a","term_name":"transmembrane transport from lysosomal lumen to cytosol","termid":"GO:0170063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"dipeptide transmembrane transport from lysosomal lumen to cytosol","synonyms":[{"name":"dipeptide export from lysosomal lumen","type":"exact"},{"name":"dipeptide export from lysosome","type":"exact"},{"name":"transmembrane dipeptide transport from lysosomal lumen to cytosol","type":"exact"}],"termid":"GO:0141204"}


id: FYPO:0006621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which deacetylation of lysine at position 4 of histone H3 is normal (i.e. indistinguishable from wild type) when the cell is returned to glucose-rich medium following glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal H3-K4 deacetylation during recovery from glucose starvation","synonyms":[{"name":"normal H3-K4 deacetylation during recovery from glucose depletion","type":"exact"},{"name":"normal H3-K4 deacetylation during recovery from glucose deprivation","type":"exact"},{"name":"normal H3-K4 deacetylation during recovery from glucose limitation","type":"related"},{"name":"normal H3-K4 deacetylation following glucose starvation","type":"exact"},{"name":"normal H3K4 deacetylation during recovery from glucose starvation","type":"exact"}],"termid":"FYPO:0006621"}


id: GO:0005955
data:
  {"annotated_genes":["SJAG_03631","SJAG_03793"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72751,79343],"is_not":false,"summary":null,"term":"GO:0005955"}]},"cv_name":"cellular_component","definition":"A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin.","definition_xrefs":["PMID:26794871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03631":null,"SJAG_03793":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"calcineurin complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"calcium-dependent protein serine/threonine phosphatase complex","type":"narrow"},{"name":"protein phosphatase type 2B complex","type":"exact"}],"termid":"GO:0005955","terms_by_termid":{"GO:0005955":null}}


id: PBO:0052096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 13","termid":"PBO:0052096"}


id: MONDO:0957112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic chloride channel defect","secondary_identifiers":["Orphanet:98739","MEDGEN:1843259","UMLS:C5681687","GARD:19564"],"termid":"MONDO:0957112","xrefs":{"Monarch":{"xref_id":"0957112"}}}


id: PBO:0001290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rik1/ddb1 subfamily","termid":"PBO:0001290"}


id: PBO:0088831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph1","termid":"PBO:0088831"}


id: GO:0008861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + formate = CoA + pyruvate.","definition_xrefs":["RHEA:11844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acetyltransferase activity","termid":"GO:0016453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"formate C-acetyltransferase activity","secondary_identifiers":["EC:2.3.1.54","MetaCyc:PYRUVFORMLY-RXN"],"synonyms":[{"name":"PFL","type":"exact"},{"name":"formate acetyltransferase activity","type":"related"}],"termid":"GO:0008861"}


id: GO:2000736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"stem cell differentiation","termid":"GO:0048863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stem cell differentiation","termid":"GO:2000736"}


id: PBO:0030778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_mercaptoethanol","termid":"PBO:0030778"}


id: PBO:0055861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 8","termid":"PBO:0055861"}


id: PBO:0083089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA binding protein with possible chromatin-reorganizing activity; involved in transcriptional activation, gene silencing, and DNA replication and repair","termid":"PBO:0083089"}


id: GO:0061824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an axoneme is exposed entirely or partially to the cytoplasm or by which the cytoplasmic portion is assembled or extended. Cytosolic ciliogenesis can occur following compartmentalized ciliogenesis, in which the cilium is formed within a compartment separated from the cytoplasm.","definition_xrefs":["PMID:25447994","PMID:26654377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cytosolic ciliogenesis","synonyms":[{"name":"intracellular ciliogenesis","type":"related"}],"termid":"GO:0061824"}


id: FYPO:0002100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an 3'-5' DNA helicase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000652","FYPO:0000661","FYPO:0000641","FYPO:0001985","FYPO:0000654","FYPO:0000002","FYPO:0000707"],"is_obsolete":false,"name":"abnormal 3'-5' DNA helicase activity","termid":"FYPO:0002100"}


id: PBO:0057751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1910","termid":"PBO:0057751"}


id: FYPO:0005851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the biotinylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein biotinylation during vegetative growth","synonyms":[{"name":"abnormal protein biotinylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005851"}


id: GO:1905497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of triplex DNA binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:26503245"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of triplex DNA binding (obsolete GO:1905497)","synonyms":[{"name":"down regulation of triplex DNA binding","type":"exact"},{"name":"down-regulation of triplex DNA binding","type":"exact"},{"name":"downregulation of triplex DNA binding","type":"exact"},{"name":"inhibition of triplex DNA binding","type":"narrow"}],"termid":"GO:1905497"}


id: PBO:0052266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4A","termid":"PBO:0052266"}


id: MONDO:1040035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by variants in the LRIT3 gene.","definition_xrefs":["PMID:31189098","PMID:23246293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"LRIT3-related retinopathy","synonyms":[{"name":"LRIT3-related retinopathy","type":"exact"}],"termid":"MONDO:1040035","xrefs":{"Monarch":{"xref_id":"1040035"}}}


id: PBO:0076683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 2","termid":"PBO:0076683"}


id: PATO:0001607
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tangled quality inhering in a bearer by virtue of the bearer's being not possible to unravel.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tangled","termid":"PATO:0001846"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matted","termid":"PATO:0001607"}


id: MOD:00117
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-glutamine residue by a thioester bond with the formation of S-(L-isoglutamyl)-L-cysteine and the release of ammonia.","definition_xrefs":["PubMed:6838833","ChEBI:22021","DeltaMass:0","RESID:AA0108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"crosslinked L-glutamine residue","termid":"MOD:02046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-isoglutamyl)-L-cysteine","synonyms":[{"name":"(2S)-2-amino-5-[(2R)-2-amino-2-carboxyethyl]sulfanyl-5-oxopentanoic acid","type":"exact"},{"name":"(S,R)-2-amino-4-[S-(2-amino-2-carboxyethyl)thiocarboxy]butanoic acid","type":"exact"},{"name":"2-amino-5-(2-amino-2-carboxyethyl)thio-5-oxopentanoic acid","type":"exact"},{"name":"CROSSLNK Isoglutamyl cysteine thioester (Cys-Gln)","type":"exact"},{"name":"S-(L-isoglutamyl)-L-cysteine","type":"exact"},{"name":"S-gamma-glutamyl (crosslinked to cysteine)","type":"exact"},{"name":"XLNK-SCys-5Glu(Gln)","type":"exact"},{"name":"gamma-(S-cysteinyl)glutamic acid","type":"exact"}],"termid":"MOD:00117"}


id: GO:0070264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIE contains a specific subset of ribosomal proteins.","definition_xrefs":["GOC:jp","PMID:19116144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIIE complex","termid":"GO:0070264"}


id: GO:0006856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of eye pigment precursors, the inactive forms of visual pigments, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"part_of","term_name":"developmental pigmentation","termid":"GO:0048066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"eye pigment precursor transport","termid":"GO:0006856"}


id: GO:0007367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of the 14 parasegments of the embryo into anterior and posterior compartments; exemplified by the actions of the segment polarity gene products.","definition_xrefs":["ISBN:0632030488","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodic partitioning","termid":"GO:0007365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"segment polarity determination","termid":"GO:0007367"}


id: PBO:0113169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein required for efficient mating; may participate in or regulate the low affinity Ca2+ influx system, which affects intracellular signaling and cell-cell fusion during mating; targeted to vacuole via AP-3 pathway","termid":"PBO:0113169"}


id: GO:0034465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon monoxide (CO) stimulus.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbon monoxide","termid":"GO:0034465"}


id: FYPO:0003371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:18256290","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to actomyosin contractile ring","termid":"FYPO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000032","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to cytokinetic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to mitotic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein recruitment to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"related"},{"name":"protein localization to actomyosin contractile ring abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003371"}


id: FYPO:0001060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutamate into the cell occurs to a lower extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutamate import during vegetative growth","termid":"FYPO:0001059"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"decreased glutamate import","termid":"FYPO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased glutamate import during vegetative growth","synonyms":[{"name":"decreased L-glutamate import across plasma membrane during vegetative growth","type":"exact"},{"name":"decreased L-glutamate import during vegetative growth","type":"exact"},{"name":"decreased glutamate import during mitotic cell cycle","type":"related"},{"name":"decreased glutamate import into cell during vegetative growth","type":"exact"},{"name":"decreased glutamate uptake during vegetative growth","type":"exact"},{"name":"reduced glutamate import during vegetative growth","type":"exact"}],"termid":"FYPO:0001060"}


id: GO:0045625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 1 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T-helper 1 type immune response","termid":"GO:0002825"},{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"regulates","term_name":"T-helper 1 cell differentiation","termid":"GO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 1 cell differentiation","synonyms":[{"name":"regulation of T-helper 1 cell development","type":"related"}],"termid":"GO:0045625"}


id: PBO:0086117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for degradation of unstable forms of cytochrome c; located in the mitochondria","termid":"PBO:0086117"}


id: PBO:0082708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; Mic26p is a non-essential component of the complex; orthologous to human APOO and APOOL","termid":"PBO:0082708"}


id: PBO:0049773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9","termid":"PBO:0049773"}


id: MONDO:0000629
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007154"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the cardiovascular system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"cardiovascular neoplasm","termid":"MONDO:0024757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"cardiovascular organ benign neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843462","UMLS:C0848083","DOID:0060091"],"synonyms":[{"name":"cardiovascular system benign neoplasm","type":"exact"}],"termid":"MONDO:0000629","terms_by_termid":{"MONDO:0007154":null},"xrefs":{"Monarch":{"xref_id":"0000629"}}}


id: GO:0051437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the rate of ubiquitin ligase activity that contributes to the regulation of the mitotic cell cycle phase transition.","definition_xrefs":["GOC:tb","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition (obsolete GO:0051437)","synonyms":[{"name":"activation of ubiquitin ligase activity during mitotic cell cycle","type":"narrow"},{"name":"mitotic SCF complex activator","type":"narrow"},{"name":"mitotic ubiquitin ligase activator","type":"narrow"},{"name":"positive regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle","type":"related"},{"name":"stimulation of ubiquitin ligase activity during mitotic cell cycle","type":"narrow"},{"name":"up regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"up-regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"upregulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"}],"termid":"GO:0051437"}


id: GO:0031591
data:
  {"annotated_genes":["SJAG_04265","SJAG_01261","SJAG_04735","SJAG_05334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72042,73613,74822,94495],"is_not":false,"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.","definition_xrefs":["RNAmods:037","GOC:hjd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"wybutosine metabolic process","termid":"GO:0031590"},{"relation_name":"is_a","term_name":"glycosyl compound biosynthetic process","termid":"GO:1901659"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01261":null,"SJAG_04265":null,"SJAG_04735":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"wybutosine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"yW biosynthesis","type":"exact"},{"name":"yW biosynthetic process","type":"exact"}],"termid":"GO:0031591","terms_by_termid":{"GO:0031591":null}}


id: MONDO:0005113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute infectious disorder that is caused by gram positive or gram negative bacteria; representative examples include pneumococcal, streptococcal, salmonella, and meningeal infections.","definition_xrefs":["NCIT:C2890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial infectious disease","secondary_identifiers":["MESH:D001424","UMLS:C0004623","SCTID:87628006","MEDGEN:14012","ICD9:041.89","EFO:0000771","ICD9:041.9","DOID:104","ICD9:040.89"],"synonyms":[{"name":"Bacteria caused disease or disorder","type":"exact"},{"name":"Bacteria disease or disorder","type":"exact"},{"name":"Bacteria infectious disease","type":"exact"},{"name":"bacterial disease","type":"exact"},{"name":"bacterial disorder","type":"exact"},{"name":"bacterial infection","type":"exact"},{"name":"bacterial infectious disease","type":"exact"},{"name":"infection, bacterial","type":"exact"},{"name":"infections, bacterial","type":"related"}],"termid":"MONDO:0005113","xrefs":{"Monarch":{"xref_id":"0005113"}}}


id: PBO:0085064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and translocation into the ER; other members are Sec63p, Sec62p, and Sec72p","termid":"PBO:0085064"}


id: FYPO:0007113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects the organization of the microtubule cytoskeleton during all or part of the meiotic cell cycle. Microtubule cytoskeleton organization is a cellular process that results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["PomBase:mah","GO:0000226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton organization during meiotic cell cycle","synonyms":[{"name":"abnormal microtubule cytoskeleton organisation during meiotic cell cycle","type":"exact"},{"name":"abnormal microtubule organisation during meiotic cell cycle","type":"related"},{"name":"abnormal microtubule organization during meiotic cell cycle","type":"related"},{"name":"disorganized microtubule cytoskeleton during meiotic cell cycle","type":"related"},{"name":"microtubule cytoskeleton defects during meiotic cell cycle","type":"exact"},{"name":"microtubule organization defects during meiotic cell cycle","type":"related"}],"termid":"FYPO:0007113"}


id: PBO:0055526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2960","termid":"PBO:0055526"}


id: GO:0033730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arogenate + NADP+ = L-tyrosine + NADPH + CO2.","definition_xrefs":["EC:1.3.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arogenate dehydrogenase [NAD(P)+] activity","termid":"GO:0033731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arogenate dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:RXN-5682","RHEA:15417"],"synonyms":[{"name":"L-arogenate:NADP+ oxidoreductase (decarboxylating) activity","type":"related"},{"name":"TyrAAT1","type":"related"},{"name":"TyrAAT2","type":"related"},{"name":"TyrAa","type":"related"},{"name":"arogenic dehydrogenase activity","type":"broad"},{"name":"pretyrosine dehydrogenase activity","type":"broad"}],"termid":"GO:0033730"}


id: MONDO:0016002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Ehlers-Danlos syndrome characterized by severe hypotonia and kyphoscoliosis at birth, generalized joint hyperextensibility and ocular globe fragility.","definition_xrefs":["Orphanet:1900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, kyphoscoliotic type 1","secondary_identifiers":["MESH:C536198","NANDO:1200649","DOID:0080734","GARD:22216","NCIT:C125700","MEDGEN:75672","UMLS:C0268342","OMIM:225400","NANDO:2201259","SCTID:718211004"],"synonyms":[{"name":"EDS 6","type":"exact"},{"name":"EDS 6 (formerly)","type":"related"},{"name":"EDS VI","type":"related"},{"name":"EDS VIA","type":"narrow"},{"name":"EDS, kyphoscoliotic type","type":"exact"},{"name":"EDS, oculoscoliotic type","type":"exact"},{"name":"EDS6","type":"exact"},{"name":"EDS6A, formerly","type":"related"},{"name":"EDSKSCL1","type":"related"},{"name":"Ehlers-Danlos syndrome kyphoscoliotic type","type":"exact"},{"name":"Ehlers-Danlos syndrome oculoscoliotic type","type":"related"},{"name":"Ehlers-Danlos syndrome type 6 (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome type 6A","type":"narrow"},{"name":"Ehlers-Danlos syndrome type 6A (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, kyphoscoliosis type","type":"related"},{"name":"Ehlers-Danlos syndrome, kyphoscoliotic type","type":"exact"},{"name":"Ehlers-Danlos syndrome, kyphoscoliotic type 1","type":"exact"},{"name":"Ehlers-Danlos syndrome, kyphoscoliotic type, 1","type":"related"},{"name":"Ehlers-Danlos syndrome, ocular-scoliotic type","type":"related"},{"name":"Ehlers-Danlos syndrome, oculoscoliotic type","type":"exact"},{"name":"Ehlers-Danlos syndrome, type 6","type":"exact"},{"name":"Ehlers-Danlos syndrome, type 6 A","type":"related"},{"name":"Ehlers-Danlos syndrome, type VI","type":"related"},{"name":"Ehlers-Danlos syndrome, type VIA","type":"narrow"},{"name":"Ehlers-Danlos syndrome, type VIA, formerly","type":"narrow"},{"name":"Ehlers-Danlos syndrome, type Via","type":"narrow"},{"name":"Ehlers-Danlos syndrome, type Via, formerly","type":"narrow"},{"name":"kEDS","type":"related"},{"name":"kyphoscoliotic EDS","type":"related"},{"name":"kyphoscoliotic Ehlers-Danlos syndrome","type":"related"},{"name":"kyphoscoliotic Ehlers-Danlos syndrome due to lysyl hydroxylase 1 deficiency","type":"exact"},{"name":"nevo syndrome","type":"exact"}],"termid":"MONDO:0016002","xrefs":{"Monarch":{"xref_id":"0016002"}}}


id: GO:0003919
data:
  {"annotated_genes":["SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78381],"is_not":false,"summary":null,"term":"GO:0003919"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + FMN = diphosphate + FAD.","definition_xrefs":["EC:2.7.7.2","RHEA:17237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01937":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"FMN adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-196929","KEGG_REACTION:R00161","MetaCyc:FADSYN-RXN"],"synonyms":[{"name":"ATP:FMN adenylyltransferase activity","type":"exact"},{"name":"FAD diphosphorylase activity","type":"related"},{"name":"FAD pyrophosphorylase activity","type":"related"},{"name":"FAD synthetase activity","type":"related"},{"name":"adenosine triphosphate-riboflavin mononucleotide transadenylase activity","type":"related"},{"name":"adenosine triphosphate-riboflavine mononucleotide transadenylase activity","type":"related"},{"name":"flavin adenine dinucleotide synthetase activity","type":"related"},{"name":"riboflavin adenine dinucleotide pyrophosphorylase activity","type":"related"},{"name":"riboflavin mononucleotide adenylyltransferase activity","type":"related"},{"name":"riboflavine adenine dinucleotide adenylyltransferase activity","type":"related"}],"termid":"GO:0003919","terms_by_termid":{"GO:0003919":null}}


id: PBO:0041239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1orf100 pseudogene 1","termid":"PBO:0041239"}


id: PBO:0030604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-coflocculating_cells","termid":"PBO:0030604"}


id: PBO:0054136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1502","termid":"PBO:0054136"}


id: PBO:0002662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase Pik3","termid":"PBO:0002662"}


id: MONDO:0800421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy, familial hypertrophic, 4, susceptibility to","secondary_identifiers":["MEDGEN:414013","UMLS:C2751427"],"termid":"MONDO:0800421","xrefs":{"Monarch":{"xref_id":"0800421"}}}


id: PBO:0075062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-25","termid":"PBO:0075062"}


id: PBO:0090476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar calcium transmembrane transporter","termid":"PBO:0090476"}


id: MONDO:0002023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cystic echinococcosis (obsolete MONDO:0002023)","termid":"MONDO:0002023","xrefs":{"Monarch":{"xref_id":"0002023"}}}


id: FYPO:0001250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the probability that a DNA replication will initiate at a particular replication origin is lower than in wild type. In cells with decreased origin firing efficiency, genomic DNA replication initiates from fewer origins than wild type, and is completed in fewer, larger segments, than wild type.","definition_xrefs":["PomBase:mah","PMID:18799612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased origin firing efficiency","synonyms":[{"name":"decreased origin firing efficiency during mitotic cell cycle","type":"related"},{"name":"decreased origin firing efficiency during vegetative growth","type":"exact"},{"name":"reduced origin firing efficiency","type":"exact"}],"termid":"FYPO:0001250"}


id: GO:0045456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"ecdysteroid biosynthetic process","synonyms":[{"name":"ecdysteroid anabolism","type":"exact"},{"name":"ecdysteroid biosynthesis","type":"exact"},{"name":"ecdysteroid formation","type":"exact"},{"name":"ecdysteroid synthesis","type":"exact"}],"termid":"GO:0045456"}


id: PATO:0001220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001220 angle_unit (obsolete PATO:0001220)","termid":"PATO:0001220"}


id: MONDO:0005575
data:
  {"annotated_genes":["SJAG_01837","SJAG_00980","SJAG_01082","SJAG_04206","SJAG_01620","SJAG_02426","SJAG_02187","SJAG_03453","SJAG_02226","SJAG_02231","SJAG_02748","SJAG_04394","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86277,86278,86279,86280,86281,86282,86283,86284,87129],"is_not":false,"summary":null,"term":"MONDO:0005575"},{"annotations":[86169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[84991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[85440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[85442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[85453,85452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the colon or rectum. Representative examples include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:C4978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neoplasm","termid":"MONDO:0005335"},{"relation_name":"is_a","term_name":"intestinal cancer","termid":"MONDO:0005814"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colorectal cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:5672","MEDGEN:83428","OMIM:114500","SCTID:363510005","DOID:9256","UMLS:C0346629","Orphanet:466667"],"synonyms":[{"name":"CRC","type":"related"},{"name":"cancer of colorectum","type":"exact"},{"name":"cancer of large bowel","type":"exact"},{"name":"cancer of large intestine","type":"exact"},{"name":"cancer of the large bowel","type":"exact"},{"name":"colon cancer","type":"related"},{"name":"colon cancer, advanced, somatic","type":"exact"},{"name":"colon cancer, somatic","type":"exact"},{"name":"colon cancer, susceptibility to, autosomal dominant, somatic mutation","type":"related"},{"name":"colorectal cancer","type":"exact"},{"name":"colorectal cancer with chromosomal instability, somatic","type":"exact"},{"name":"colorectal cancer, autosomal dominant, somatic mutation","type":"exact"},{"name":"colorectal cancer, somatic","type":"exact"},{"name":"colorectal cancer, susceptibility to, autosomal dominant, somatic mutation","type":"exact"},{"name":"colorectum cancer","type":"exact"},{"name":"large intestine cancer","type":"related"},{"name":"malignant colorectal neoplasm","type":"exact"},{"name":"malignant colorectal tumor","type":"exact"},{"name":"malignant colorectal tumour","type":"exact"},{"name":"malignant colorectum neoplasm","type":"exact"},{"name":"malignant large bowel neoplasm","type":"exact"},{"name":"malignant large bowel tumor","type":"exact"},{"name":"malignant large bowel tumour","type":"exact"},{"name":"malignant large intestine neoplasm","type":"exact"},{"name":"malignant large intestine tumor","type":"exact"},{"name":"malignant large intestine tumour","type":"exact"},{"name":"malignant neoplasm of colorectum","type":"exact"},{"name":"malignant neoplasm of large bowel","type":"exact"},{"name":"malignant neoplasm of large intestine","type":"exact"},{"name":"malignant neoplasm of the large bowel","type":"exact"},{"name":"malignant neoplasm of the large intestine","type":"exact"},{"name":"malignant tumor of large bowel","type":"exact"},{"name":"malignant tumor of large intestine","type":"exact"},{"name":"malignant tumor of the large bowel","type":"exact"},{"name":"malignant tumor of the large intestine","type":"exact"},{"name":"malignant tumour of large bowel","type":"exact"},{"name":"malignant tumour of large intestine","type":"exact"},{"name":"malignant tumour of the large bowel","type":"exact"},{"name":"malignant tumour of the large intestine","type":"exact"}],"termid":"MONDO:0005575","terms_by_termid":{"MONDO:0005575":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0005575"}}}


id: MONDO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ring corneal ulcer","secondary_identifiers":["DOID:10444","ICD9:370.02","MEDGEN:509766","icd11.foundation:1877531217","SCTID:111520007","UMLS:C0155068"],"termid":"MONDO:0001037","xrefs":{"Monarch":{"xref_id":"0001037"}}}


id: PBO:0042335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD63 antisense RNA 1","termid":"PBO:0042335"}


id: GO:0071432
data:
  {"annotated_genes":["SJAG_04398","SJAG_05016"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87627,92979],"is_not":false,"summary":null,"term":"GO:0071432"}]},"cv_name":"biological_process","definition":"The formation of a mature peptide mating pheromone by proteolysis and/or modification of a peptide precursor, occurring in the context of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide pheromone maturation","termid":"GO:0007323"},{"relation_name":"positively_regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04398":null,"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"peptide mating pheromone maturation involved in positive regulation of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"a-factor processing (proteolytic)","type":"narrow"},{"name":"alpha-factor maturation","type":"narrow"},{"name":"mating-type peptide pheromone maturation involved in conjugation with cellular fusion","type":"exact"},{"name":"peptide mating pheromone formation involved in conjugation with cellular fusion","type":"exact"},{"name":"peptide mating pheromone processing involved in conjugation with cellular fusion","type":"exact"}],"termid":"GO:0071432","terms_by_termid":{"GO:0071432":null}}


id: GO:0039657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts expression of genes in its host. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["VZ:1582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host gene expression","synonyms":[{"name":"host gene expression shutoff","type":"exact"},{"name":"host gene expression shutoff by virus","type":"narrow"},{"name":"suppression by virus of host gene expression","type":"narrow"}],"termid":"GO:0039657"}


id: RO:0001018
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contained_in","termid":"RO:0001018"}


id: GO:0000243
data:
  {"annotated_genes":["SJAG_00058","SJAG_00147","SJAG_01301","SJAG_05009","SJAG_03995","SJAG_01654","SJAG_00249","SJAG_03983","SJAG_00225"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72114,76811,79171,79348,91355,97628,101042,113063,118508],"is_not":false,"summary":null,"term":"GO:0000243"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by association of the U1 snRNP with the 5' splice site of an unspliced intron in an RNA transcript.","definition_xrefs":["PMID:9150140","ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_01301":null,"SJAG_01654":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"commitment complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mammalian spliceosomal E complex","type":"narrow"},{"name":"mammalian spliceosomal complex E","type":"narrow"},{"name":"yeast spliceosomal complex CC","type":"narrow"}],"termid":"GO:0000243","terms_by_termid":{"GO:0000243":null}}


id: GO:0021812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The changes in adhesion between neuronal cells and glial cells as a component of the process of cerebral cortex glial-mediated radial cell migration.","definition_xrefs":["PMID:12626695","GOC:cls","GOC:jid","GOC:dgh","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"neuronal-glial interaction involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"neuronal-glial interaction involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021812"}


id: GO:0098686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the giant synapses that form between the mossy fiber axons of dentate gyrus granule cells and the large complex spines of CA3 pyramidal cells. It consists of a giant bouton known as the mossy fiber expansion, synapsed to the complex, multiheaded spine (thorny excresence) of a CA3 pyramidal cell.","definition_xrefs":["PMID:13869693","DOI:10.1002/1096-9861","PMID:23264762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron to neuron synapse","termid":"GO:0098984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hippocampal mossy fiber to CA3 synapse","termid":"GO:0098686"}


id: PATO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000887 relative litter size value (obsolete PATO:0000887)","termid":"PATO:0000887"}


id: PBO:0067760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 60","termid":"PBO:0067760"}


id: GO:0035849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nephric duct grows along its axis. A nephric duct is a tube that drains a primitive kidney.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","PMID:16216236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"nephric duct morphogenesis","termid":"GO:0072178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephric duct elongation","termid":"GO:0035849"}


id: PBO:0113454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterodimeric guanine nucleotide exchange factor (GEF); subunit of Mon1-Ccz1 GEF complex which stimulates nucleotide exchange and activation of Ypt7p, a Rab family GTPase involved in membrane tethering and fusion events at late endosome and vacuole; GEF activity is stimulated by membrane association and anionic phospholipids; role in localizing Ypt7p to vacuolar membrane; required for autophagy, CVT pathway, and mitophagy; targeted to vacuole via AP-3 pathway","termid":"PBO:0113454"}


id: PBO:0036107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell-cell_adhesion","termid":"PBO:0036107"}


id: GO:0098985
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuron to neuron synapse with a postsynaptic density, that uses glutamate as a neurotransmitter and whose activity results in excitatory postsynaptic potentials.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric synapse","termid":"GO:0032279"},{"relation_name":"is_a","term_name":"excitatory synapse","termid":"GO:0060076"},{"relation_name":"is_a","term_name":"glutamatergic synapse","termid":"GO:0098978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"asymmetric, glutamatergic, excitatory synapse","termid":"GO:0098985"}


id: PBO:0001480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are1 (predicted)","termid":"PBO:0001480"}


id: GO:0071746
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds, sometimes complexed with J chain or J chain and secretory component, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["PMID:16362985","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex, circulating","termid":"GO:0042571"},{"relation_name":"is_a","term_name":"IgA immunoglobulin complex","termid":"GO:0071745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"IgA immunoglobulin complex, circulating","synonyms":[{"name":"IgA antibody","type":"exact"},{"name":"IgA1 antibody","type":"narrow"},{"name":"IgA2 antibody","type":"narrow"}],"termid":"GO:0071746"}


id: PBO:0078334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-6","termid":"PBO:0078334"}


id: GO:0052210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with a second organism mediated by a substance secreted by the first organism by a type III secretion system, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with other organism via protein secreted by type III secretion system involved in symbiotic interaction (obsolete GO:0052210)","synonyms":[{"name":"interaction with other organism via protein secreted by type III secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052210"}


id: PBO:0036206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K4_methylation_during_vegetative_growth","termid":"PBO:0036206"}


id: MONDO:0006645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease affecting more than one nerve.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and toxic neuropathy (obsolete MONDO:0002336)","termid":"MONDO:0002336"},{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"alcoholic polyneuropathy","secondary_identifiers":["icd11.foundation:597341977","MEDGEN:39087","ICD10CM:G62.1","UMLS:C0085677","NCIT:C26926","SCTID:7916009","EFO:1000803","DOID:14183","ICD9:357.5","MESH:D020269"],"synonyms":[{"name":"alcohol-related polyneuropathy","type":"exact"},{"name":"alcoholic neuropathy","type":"exact"}],"termid":"MONDO:0006645","xrefs":{"Monarch":{"xref_id":"0006645"}}}


id: PBO:0000966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Meu34 (predicted)","termid":"PBO:0000966"}


id: GO:0051663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the nucleus to a specific location within a cell during the establishment and maintenance of the dorsal/ventral axis of the oocyte.","definition_xrefs":["GOC:ai","GOC:dph","GOC:mtg_sensu","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus localization","termid":"GO:0051647"},{"relation_name":"part_of","term_name":"oocyte dorsal/ventral axis specification","termid":"GO:0007310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"oocyte nucleus localization involved in oocyte dorsal/ventral axis specification","secondary_identifiers":["GO:0051662"],"synonyms":[{"name":"establishment and maintenance of oocyte nucleus localization during oocyte axis determination","type":"exact"},{"name":"oocyte axis determination, oocyte nucleus localization","type":"exact"},{"name":"oocyte nucleus localisation involved in oocyte dorsal/ventral axis specification","type":"exact"},{"name":"oocyte nucleus localization during oocyte axis determination","type":"related"},{"name":"oocyte nucleus localization involved in oocyte dorsal-ventral axis specification","type":"exact"},{"name":"oocyte nucleus localization involved in oocyte dorsal/ventral axis determination","type":"exact"},{"name":"oocyte nucleus localization involved in oocyte dorsoventral axis specification","type":"exact"}],"termid":"GO:0051663"}


id: PBO:0028338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_DNA_level_during_vegetative_growth","termid":"PBO:0028338"}


id: MONDO:0004312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the suprasellar region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suprasellar meningioma","secondary_identifiers":["MEDGEN:234911","DOID:7634","UMLS:C1336535","NCIT:C6776"],"synonyms":[{"name":"meningioma (disease) of sella turcica","type":"exact"},{"name":"sella turcica meningioma (disease)","type":"exact"}],"termid":"MONDO:0004312","xrefs":{"Monarch":{"xref_id":"0004312"}}}


id: PR:P40387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha,alpha-trehalose-phosphate synthase [UDP-forming] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01450","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.03","secondary_identifiers":["UniProtKB:P40387"],"synonyms":[{"name":"Spom972h-otsA","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40387"}


id: _global:existence_ends_during_or_before
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x existence ends during or before y if and only if the time point at which x ends is before or equivalent to the time point at which y ends.","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_physical_entity_and_a_process_or_stage","termid":"_global:relation_between_physical_entity_and_a_process_or_stage"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_during_or_before","secondary_identifiers":["RO:0002497"],"termid":"_global:existence_ends_during_or_before"}


id: GO:1901774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lincomycin.","definition_xrefs":["GOC:TermGenie","MetaCyc:PWY-6955","PMID:8577249","GOC:yaf","UniPathway:UPA00161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside biosynthetic process","termid":"GO:0016144"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"lincomycin metabolic process","termid":"GO:1901772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"lincomycin biosynthetic process","synonyms":[{"name":"lincomycin anabolism","type":"exact"},{"name":"lincomycin biosynthesis","type":"exact"},{"name":"lincomycin formation","type":"exact"},{"name":"lincomycin synthesis","type":"exact"}],"termid":"GO:1901774"}


id: PBO:0078206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-8","termid":"PBO:0078206"}


id: GO:1990899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process following clipping in double-strand break processing of SPO11 induced breaks, where long-tract single-stranded 3'-end DNA is generated from naked (SPO11 has been removed) 5' ends.","definition_xrefs":["PMID:26130711"],"gene_count":0,"genotype_count":0,"name":"obsolete meiotic DNA double-strand break resectioning (obsolete GO:1990899)","termid":"GO:1990899"}


id: PBO:0073445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFR1 pseudogene 1","termid":"PBO:0073445"}


id: PBO:0113147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor for Gpa1p; amplifies G-protein signaling; subunit of the GET complex involved in ATP-dependent Golgi-to-ER trafficking; binds as a dimer to the transmembrane domain of tail-anchored proteins in the cytosol, shielding them from aqueous solvent until the Get1p/Get2p heterodimer releases the substrate and inserts it into the ER membrane; acts as a chaperone under ATP-depleted oxidative stress conditions; protein abundance increases under DNA replication stress","termid":"PBO:0113147"}


id: PBO:0031781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_endocytosis_during_vegetative_growth","termid":"PBO:0031781"}


id: GO:0098656
data:
  {"annotated_genes":["SJAG_03401","SJAG_02463","SJAG_00048","SJAG_01168","SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59167],"is_not":false,"summary":null,"term":"GO:0098656"},{"annotations":[76887,73280,70177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902476"},{"annotations":[113531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140116"}]},"cv_name":"biological_process","definition":"The process in which a monoatomic anion is transported across a membrane. Monatomic anions (also called simple anions) are negatively charged ions consisting of exactly one atom.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transport","termid":"GO:0006820"},{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_01168":null,"SJAG_01973":null,"SJAG_02463":null,"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"monoatomic anion transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0099133"],"synonyms":[{"name":"ATP hydrolysis coupled anion transmembrane transport","type":"narrow"},{"name":"anion transmembrane transport","type":"exact"}],"termid":"GO:0098656","terms_by_termid":{"GO:0098656":null,"GO:0140116":null,"GO:1902476":null}}


id: MOD:00030
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an N-formyl-L-methionine, a natural pretranslational modification.","definition_xrefs":["RESID:AA0021#FMET","PubMed:11152118","Unimod:107#N-term","PubMed:2165784","ChEBI:33718","OMSSA:22","PubMed:8758896","PubMed:10825024","PubMed:3042771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"natural, non-standard encoded residue","termid":"MOD:00868"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formyl-L-methionine residue","synonyms":[{"name":"(2S)-2-formylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formamido-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-formylazanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"Addition of N-formyl met","type":"related"},{"name":"FormylMet","type":"related"},{"name":"MOD_RES N-formylmethionine","type":"exact"},{"name":"N-formyl-L-methionine","type":"exact"},{"name":"N-formylated L-methionine","type":"exact"},{"name":"fMet","type":"exact"},{"name":"nformylmet","type":"exact"}],"termid":"MOD:00030"}


id: PBO:0081752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 681","termid":"PBO:0081752"}


id: GO:1901047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of the insulin receptor binding to insulin that controls viability and duration in the adult phase of the life-cycle.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:9360933"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin receptor signaling pathway involved in determination of adult lifespan (obsolete GO:1901047)","synonyms":[{"name":"daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"insulin receptor signalling pathway of determination of adult lifespan","type":"exact"}],"termid":"GO:1901047"}


id: PR:O94267
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A FACT complex subunit SPT16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit spt16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.19","secondary_identifiers":["UniProtKB:O94267"],"synonyms":[{"name":"Spom972h-SUPT16H","type":"exact"},{"name":"facilitates chromatin transcription complex subunit spt16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94267"}


id: PBO:0080977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB11 antisense RNA 1","termid":"PBO:0080977"}


id: MONDO:0014145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the GDF6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Leber congenital amaurosis 17","secondary_identifiers":["GARD:15950","DOID:0110217","ICD10CM:H35.5","OMIM:615360","UMLS:C3715164","MEDGEN:811616"],"synonyms":[{"name":"GDF6 Leber congenital amaurosis","type":"exact"},{"name":"LCA17","type":"exact"},{"name":"Leber congenital amaurosis 17","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in GDF6","type":"exact"},{"name":"Leber congenital amaurosis type 17","type":"exact"}],"termid":"MONDO:0014145","xrefs":{"Monarch":{"xref_id":"0014145"}}}


id: PBO:0027501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_FR901464","termid":"PBO:0027501"}


id: PBO:0060049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 37","termid":"PBO:0060049"}


id: MONDO:0005600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian adenocarcinoma (obsolete MONDO:0005600)","termid":"MONDO:0005600","xrefs":{"Monarch":{"xref_id":"0005600"}}}


id: PBO:0088797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphospho-oligosaccharide-protein glycosyltransferase Ost1","termid":"PBO:0088797"}


id: MONDO:0015436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 20 syndrome is marked by a characteristic seizure phenotype. Depending on the amount of chromosomal loss and associated mosaicism, ring(20) can be associated with macrocephaly, mild to moderate intellectual deficit, or behavioral problems. In rare cases, brain, kidney or heart malformations may be present.","definition_xrefs":["Orphanet:1444"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 20","secondary_identifiers":["MESH:C580424","MEDGEN:489853","SCTID:23686004","GARD:1334","ICD9:758.89","NCIT:C169001","UMLS:C0265482","NANDO:1200597"],"synonyms":[{"name":"R20","type":"related"},{"name":"chromosome 20 ring","type":"related"},{"name":"ring 20","type":"related"},{"name":"ring chromosome 20 syndrome","type":"exact"},{"name":"ring chromosome type 20","type":"exact"}],"termid":"MONDO:0015436","xrefs":{"Monarch":{"xref_id":"0015436"}}}


id: MONDO:0017684
data:
  {"annotated_genes":["SJAG_03434"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013166"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of beta and omega amino acid metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:308407","SCTID:237940008","GARD:21303","UMLS:C0342707","icd11.foundation:446569334","MEDGEN:575186","ICD9:270.8"],"termid":"MONDO:0017684","terms_by_termid":{"MONDO:0013166":null},"xrefs":{"Monarch":{"xref_id":"0017684"}}}


id: PBO:0059153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 7","termid":"PBO:0059153"}


id: PBO:0067540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 685, pseudogene","termid":"PBO:0067540"}


id: MONDO:0042498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"excluded_subClassOf","term_name":"ichthyosis","termid":"MONDO:0019269"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ruzicka-Goerz-Anton syndrome","secondary_identifiers":["UMLS:C2931438","MESH:C537192","MEDGEN:444055"],"synonyms":[{"name":"Ruzicka Goerz Anton syndrome","type":"exact"},{"name":"ichthyosis congenita, neurosensory deafness, oligophrenia, dental aplasia, brachydactyly, clinodactyly, accessory cervical ribs and thyroid carcinoma","type":"related"},{"name":"ichthyosis deafness intellectual disability skeletal anomalies","type":"related"},{"name":"ichthyosis deafness mental retardation skeletal anomalies","type":"related"}],"termid":"MONDO:0042498","xrefs":{"Monarch":{"xref_id":"0042498"}}}


id: PBO:0083341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene APM2/YHL019C","termid":"PBO:0083341"}


id: FYPO:0003788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nuclear envelope has one or more extensions that protrude into the cytoplasm during mitosis.","definition_xrefs":["PMID:25103238","PMID:17486116","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during mitosis","termid":"FYPO:0003779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002403","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"nuclear envelope protrusion present during mitosis","synonyms":[{"name":"nuclear envelope deformation during mitosis","type":"related"},{"name":"nuclear envelope protrusion present during mitotic M phase","type":"related"},{"name":"nuclear envelope protrusion present during mitotic cell cycle","type":"related"},{"name":"nuclear envelope protrusion present during mitotic nuclear division","type":"exact"},{"name":"nuclear envelope protrusion present during vegetative growth","type":"exact"},{"name":"protruding nuclear envelope during mitosis","type":"exact"}],"termid":"FYPO:0003788"}


id: MONDO:0001962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"abnormality of glucagon secretion","secondary_identifiers":["MEDGEN:509540","SCTID:11178005","ICD9:251.4","UMLS:C0154191","DOID:14427"],"synonyms":[{"name":"glucagon secretion abnormality","type":"exact"}],"termid":"MONDO:0001962","xrefs":{"Monarch":{"xref_id":"0001962"}}}


id: GO:1900784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of fumiquinazoline F.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline F biosynthetic process (obsolete GO:1900784)","synonyms":[{"name":"fumiquinazoline F anabolism","type":"exact"},{"name":"fumiquinazoline F biosynthesis","type":"exact"},{"name":"fumiquinazoline F formation","type":"exact"},{"name":"fumiquinazoline F synthesis","type":"exact"}],"termid":"GO:1900784"}


id: MONDO:0013268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Frontonasal dysplasia with alopecia and genital anomaly is a new phenotype of frontonasal dysplasia associated with total alopecia and hypogonadism.","definition_xrefs":["Orphanet:228390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"frontonasal dysplasia","termid":"MONDO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"frontonasal dysplasia with alopecia and genital anomaly","secondary_identifiers":["UMLS:C3150703","SCTID:725029001","DOID:0081046","OMIM:613451","GARD:12641","MEDGEN:462053"],"synonyms":[{"name":"ALX4-related FNDAG","type":"exact"},{"name":"FND2","type":"related"},{"name":"craniofrontonasal dysplasia with alopecia and hypogonadism","type":"exact"},{"name":"frontonasal dysplasia 2","type":"related"},{"name":"frontonasal dysplasia type 2","type":"exact"},{"name":"frontonasal dysplasia with alopecia and genital abnomality","type":"exact"}],"termid":"MONDO:0013268","xrefs":{"Monarch":{"xref_id":"0013268"}}}


id: MONDO:0001980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Wolman disease (obsolete MONDO:0001980)","termid":"MONDO:0001980","xrefs":{"Monarch":{"xref_id":"0001980"}}}


id: PBO:0042867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP97 domain containing 2","termid":"PBO:0042867"}


id: SO:0000590
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The signal recognition particle (SRP) is a universally conserved ribonucleoprotein. It is involved in the co-translational targeting of proteins to membranes. The eukaryotic SRP consists of a 300-nucleotide 7S RNA and six proteins: SRPs 72, 68, 54, 19, 14, and 9. Archaeal SRP consists of a 7S RNA and homologues of the eukaryotic SRP19 and SRP54 proteins. In most eubacteria, the SRP consists of a 4.5S RNA and the Ffh protein (a homologue of the eukaryotic SRP54 protein). Eukaryotic and archaeal 7S RNAs have very similar secondary structures, with eight helical elements. These fold into the Alu and S domains, separated by a long linker region. Eubacterial SRP is generally a simpler structure, with the M domain of Ffh bound to a region of the 4.5S RNA that corresponds to helix 8 of the eukaryotic and archaeal SRP S domain. Some Gram-positive bacteria (e.g. Bacillus subtilis), however, have a larger SRP RNA that also has an Alu domain. The Alu domain is thought to mediate the peptide chain elongation retardation function of the SRP. The universally conserved helix which interacts with the SRP54/Ffh M domain mediates signal sequence recognition. In eukaryotes and archaea, the SRP19-helix 6 complex is thought to be involved in SRP assembly and stabilizes helix 8 for SRP54 binding.","direct_ancestors":[{"relation_name":"derives_from","term_name":"SRP_RNA_primary_transcript","termid":"SO:0000589"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA","synonyms":[{"name":"7S RNA","type":"related"},{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:SRP_RNA","type":"exact"},{"name":"SRP RNA","type":"exact"},{"name":"signal recognition particle RNA","type":"related"}],"termid":"SO:0000590"}


id: GO:0060071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of non-canonical Wnt signaling pathway in which Wnt binding to its receptor on the surface of a target cell results in the activation small G proteins such as Rho, Rac, and Cdc42 which, in turn activate effectors, including C-Jun N-terminal kinase (JNK) and Rho kinase (Rok). The signaling ends with change in the transcription of target genes and/or reorganisation of the cytoskeleton.","definition_xrefs":["PMID:11532397","PMID:28293032","PMID:37804416","PMID:25349257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Wnt signaling pathway, planar cell polarity pathway","secondary_identifiers":["Reactome:R-HSA-4086400"],"synonyms":[{"name":"PCP pathway","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"Wnt-JNK signaling pathway","type":"related"},{"name":"Wnt-PCP signaling pathway","type":"related"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"non-canonical Wnt signaling pathway","type":"related"},{"name":"planar cell polarity pathway","type":"exact"}],"termid":"GO:0060071"}


id: PBO:0040527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azurocidin 1 pseudogene 1","termid":"PBO:0040527"}


id: GO:0003152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelial sheet bends along a linear axis, contributing to embryonic heart tube formation.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"embryonic heart tube formation via epithelial folding","termid":"GO:0003145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelial fold involved in embryonic heart tube formation","termid":"GO:0003152"}


id: GO:1901747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of prephenate(2-).","definition_xrefs":["GOC:yaf","UniPathway:UPA00120","PMID:16752890","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"prephenate(2-) metabolic process","termid":"GO:1901745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"prephenate(2-) biosynthetic process","synonyms":[{"name":"prephenate anabolism","type":"exact"},{"name":"prephenate biosynthesis","type":"exact"},{"name":"prephenate formation","type":"exact"},{"name":"prephenate synthesis","type":"exact"},{"name":"prephenate(2-) anabolism","type":"exact"},{"name":"prephenate(2-) biosynthesis","type":"exact"},{"name":"prephenate(2-) formation","type":"exact"},{"name":"prephenate(2-) synthesis","type":"exact"}],"termid":"GO:1901747"}


id: PBO:0090855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase Uck2","termid":"PBO:0090855"}


id: PBO:0091331
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. nidulans PpzA","termid":"PBO:0091331"}


id: GO:0097017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which proteins are taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures (e.g. protein absorption is observed in nephrocytes in Drosophila, see PMID:23264686).","definition_xrefs":["PMID:18431508","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal protein absorption","termid":"GO:0097017"}


id: PBO:0000669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Alanine","termid":"PBO:0000669"}


id: FYPO:0004864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is curved along the long axis, and contains interphase cytoplasmic microtubules that are longer than normal and curved. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"long curved interphase microtubules","termid":"FYPO:0004511"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"},{"relation_name":"is_a","term_name":"long curved interphase microtubules","termid":"FYPO:0004511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"viable curved vegetative cell with long curved interphase microtubules","synonyms":[{"name":"curved viable cell with elongated curved interphase microtubules","type":"exact"},{"name":"viable curved cell with long curved interphase microtubules during vegetative growth","type":"exact"},{"name":"viable curved vegetative cell with long curved cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"viable curved vegetative cell with long curved interphase cytoplasmic microtubules","type":"exact"},{"name":"viable curved vegetative cell with long curved interphase microtubules during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004864"}


id: GO:0050523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which phosphorus or arsenic acts as a hydrogen or electron donor and reduces an acceptor other than disulfide, NAD or NADP.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors (obsolete GO:0050523)","synonyms":[{"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors","type":"exact"}],"termid":"GO:0050523"}


id: PBO:0057022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR122 host gene","termid":"PBO:0057022"}


id: GO:0018265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-asparagine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a asparaginyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0158"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI anchor biosynthetic process via N-asparaginyl-glycosylphosphatidylinositolethanolamine (obsolete GO:0018265)","termid":"GO:0018265"}


id: PBO:0073732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 1 member 2","termid":"PBO:0073732"}


id: FYPO:0004940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing chloroacetaldehyde.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on chloroacetaldehyde","synonyms":[{"name":"normal cell population growth in presence of chloroacetaldehyde","type":"exact"},{"name":"normal cell population growth on CAA","type":"exact"},{"name":"normal cell population growth on chloroacetaldehyde","type":"exact"},{"name":"normal cellular response to chloroacetaldehyde","type":"related"},{"name":"normal vegetative cell population growth on chloroacetaldehyde","type":"exact"}],"termid":"FYPO:0004940"}


id: GO:0031170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ferricrocin, a cyclic hexapeptide siderophore with the structure Gly-Ser-Gly-(N5-acetyl-N5-hydroxyornithine)3.","definition_xrefs":["GOC:mah","PMID:12828635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferrichrome metabolic process","termid":"GO:0031168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ferricrocin metabolic process","synonyms":[{"name":"ferricrocin metabolism","type":"exact"}],"termid":"GO:0031170"}


id: MONDO:0009793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oral-facial-digital syndrome, type 3 is characterized by anomalies of the mouth, eyes and digits, associated with severe intellectual deficit.","definition_xrefs":["Orphanet:2752"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome III","secondary_identifiers":["GARD:10518","MEDGEN:96069","OMIM:258850","SCTID:239030004","DOID:0060373","UMLS:C0406726","MESH:C557817"],"synonyms":[{"name":"OFD syndrome 3","type":"related"},{"name":"OFD3","type":"exact"},{"name":"Ofds 3","type":"related"},{"name":"Sugarman syndrome","type":"exact"},{"name":"oral facial digital syndrome 3","type":"related"},{"name":"oral facial digital syndrome type 3","type":"related"},{"name":"oral-Facial-digital syndrome, type 3","type":"related"},{"name":"oral-facial-digital syndrome type 3","type":"exact"},{"name":"orofaciodigital syndrome 3","type":"related"},{"name":"orofaciodigital syndrome III","type":"exact"},{"name":"orofaciodigital syndrome type 3","type":"related"},{"name":"orofaciodigital syndrome type III","type":"exact"}],"termid":"MONDO:0009793","xrefs":{"Monarch":{"xref_id":"0009793"}}}


id: PBO:0044224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortexin domain containing 1","termid":"PBO:0044224"}


id: GO:0090682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor activity that is responsible for the sense of bitter taste.","definition_xrefs":["GOC:hat","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bitter taste receptor activity","termid":"GO:0033038"},{"relation_name":"is_a","term_name":"GPCR taste receptor activity","termid":"GO:0090681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"GPCR bitter taste receptor activity","synonyms":[{"name":"G protein-coupled receptor bitter taste receptor activity","type":"exact"},{"name":"G-protein coupled receptor bitter taste receptor activity","type":"exact"}],"termid":"GO:0090682"}


id: PBO:0049015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6B","termid":"PBO:0049015"}


id: GO:1990244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2A-threonine (position 120) + ATP = histone H2A-phosphothreonine (position 120) + ADP. This reaction is the addition of a phosphate group to the threonine residue at position 120 of histone H2A.","definition_xrefs":["PMID:24140421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H2A kinase activity","termid":"GO:0140995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004672","GO:0016740","GO:0140096","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H2AT120 kinase activity","synonyms":[{"name":"histone H2A-T120 kinase activity","type":"exact"},{"name":"histone kinase activity (H2A-T120 specific)","type":"exact"},{"name":"histone threonine kinase activity (H2A-T120 specific)","type":"exact"}],"termid":"GO:1990244"}


id: PBO:0004603
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP-Like Protein","termid":"PBO:0004603"}


id: PBO:0024475
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human USB1","termid":"PBO:0024475"}


id: PBO:0045053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLEU1 antisense RNA 1","termid":"PBO:0045053"}


id: GO:0046595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the directed movement of mRNA to the oocyte pole plasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of RNA localization","termid":"GO:0051236"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"pole plasm mRNA localization","termid":"GO:0019094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0044085"],"is_obsolete":false,"name":"establishment of pole plasm mRNA localization","secondary_identifiers":["GO:0048121"],"synonyms":[{"name":"establishment of oocyte pole plasm mRNA localization","type":"exact"},{"name":"establishment of pole plasm mRNA localisation","type":"exact"}],"termid":"GO:0046595"}


id: GO:0018626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-chlorobenzoate + NADH + H+ + O2 = catechol + chloride + NAD+ + CO2.","definition_xrefs":["EC:1.14.12.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-chlorobenzoate 1,2-dioxygenase activity","secondary_identifiers":["MetaCyc:2-CHLOROBENZOATE-12-DIOXYGENASE-RXN","RHEA:21652","UM-BBD_reactionID:r0632"],"synonyms":[{"name":"2-chlorobenzoate,NADH:oxygen oxidoreductase (1,2-hydroxylating, dechlorinating, decarboxylating)","type":"related"},{"name":"2-halobenzoate 1,2-dioxygenase activity","type":"exact"}],"termid":"GO:0018626"}


id: MONDO:1011823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiosarcoma, non-human animal","secondary_identifiers":["OMIA:001813"],"termid":"MONDO:1011823","xrefs":{"Monarch":{"xref_id":"1011823"}}}


id: GO:0061379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior colliculus over time, from its formation to the mature structure. The inferior colliculus (IC) (Latin, lower hill) is the principal midbrain nucleus of the auditory pathway and receives input from several more peripheral brainstem nuclei in the auditory pathway, as well as inputs from the auditory cortex. The inferior colliculus has three subdivisions: the central nucleus (CIC), a dorsal cortex (DCIC) by which it is surrounded, and an external cortex (ICX) which is located laterally.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"corpora quadrigemina development","termid":"GO:0061378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior colliculus development","termid":"GO:0061379"}


id: PBO:0068731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 2, pseudogene","termid":"PBO:0068731"}


id: PBO:0055215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2641","termid":"PBO:0055215"}


id: MONDO:0005183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign ovarian surface epithelial-stromal tumor characterized by the presence of cystic structures lined by serous epithelial cells, mucinous columnar epithelial cells, or endometrial-type well-differentiated cells.","definition_xrefs":["NCIT:C4060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenoma","termid":"MONDO:0002369"},{"relation_name":"is_a","term_name":"ovarian adenoma benign","termid":"MONDO:0005179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian cystadenoma","secondary_identifiers":["ICD9:620.2","EFO:0002511","SCTID:198297004","UMLS:C0346169","DOID:3269","MEDGEN:138041"],"synonyms":[{"name":"benign cystadenoma of ovary","type":"exact"},{"name":"benign cystadenoma of the ovary","type":"exact"},{"name":"benign ovarian cystadenoma","type":"exact"},{"name":"cystadenoma of ovary","type":"exact"},{"name":"cystadenoma of the ovary","type":"exact"},{"name":"cystoma serosum simplex","type":"exact"},{"name":"ovarian cystadenoma","type":"exact"},{"name":"ovary cystadenoma","type":"exact"},{"name":"simple cystoma of ovary","type":"exact"},{"name":"simple cystoma of the ovary","type":"exact"},{"name":"simple ovarian cystoma","type":"exact"}],"termid":"MONDO:0005183","xrefs":{"Monarch":{"xref_id":"0005183"}}}


id: GO:1900024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of substrate adhesion-dependent cell spreading.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"regulates","term_name":"substrate adhesion-dependent cell spreading","termid":"GO:0034446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of substrate adhesion-dependent cell spreading","synonyms":[{"name":"regulation of cell spreading during cell substrate adhesion","type":"exact"},{"name":"regulation of substrate adhesion dependent cell spreading","type":"exact"}],"termid":"GO:1900024"}


id: PBO:0038595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase medium chain","termid":"PBO:0038595"}


id: PBO:0085456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potassium transporter that mediates K+ influx; activates high-affinity Ca2+ influx system (HACS) during mating pheromone response; expression up-regulated in response to alpha factor; regulated by Ste12p during mating; localized to sites of polarized growth; member of a fungal-specific gene family; PRM6 has a paralog, KCH1, that arose from the whole genome duplication","termid":"PBO:0085456"}


id: PBO:0029957
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cerulenin","termid":"PBO:0029957"}


id: PBO:0076514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 15 pseudogene","termid":"PBO:0076514"}


id: PBO:0082517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins; forms a subcomplex with Ost3p and Ost4p","termid":"PBO:0082517"}


id: GO:0032682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of chemokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"negatively_regulates","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of chemokine production","secondary_identifiers":["GO:0045079","GO:0090198"],"synonyms":[{"name":"down regulation of chemokine production","type":"exact"},{"name":"down-regulation of chemokine production","type":"exact"},{"name":"downregulation of chemokine production","type":"exact"},{"name":"inhibition of chemokine production","type":"narrow"},{"name":"negative regulation of chemokine biosynthetic process","type":"narrow"},{"name":"negative regulation of chemokine secretion","type":"narrow"}],"termid":"GO:0032682"}


id: GO:0016256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of high-mannose N-glycans by UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase and the subsequent removal of the N-acetylglucosamine residues yielding mannose-6-P that occurs in the ER-Golgi apparatus to N-glycans destined for the lysosome.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycan processing","termid":"GO:0006491"},{"relation_name":"part_of","term_name":"protein targeting to lysosome","termid":"GO:0006622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006605"],"is_obsolete":false,"name":"N-glycan processing to lysosome","termid":"GO:0016256"}


id: PBO:0051874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISM1 antisense RNA 1","termid":"PBO:0051874"}


id: PBO:0029736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphatase_activity","termid":"PBO:0029736"}


id: GO:0140240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuron to neuron synapse of a pyramidal neuron in the entorhinal cortex onto a granule cell in the dentate gyrus of the hippocampus.","definition_xrefs":["PMID:29199135","PMID:22727665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"perforant pathway to dendrate granule cell synapse","synonyms":[{"name":"perforant pathway to DG granule cell synapse","type":"exact"}],"termid":"GO:0140240"}


id: GO:0042075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of nickel into a nickel-iron-sulfur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide, found in carbon monoxide dehydrogenase.","definition_xrefs":["RESID:AA0310"],"gene_count":0,"genotype_count":0,"name":"obsolete nickel incorporation into nickel-iron-sulfur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide (obsolete GO:0042075)","synonyms":[{"name":"nickel incorporation into nickel-iron-sulphur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulphide","type":"exact"}],"termid":"GO:0042075"}


id: MONDO:0013849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the CEP135 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 8, primary, autosomal recessive","secondary_identifiers":["MEDGEN:766328","OMIM:614673","GARD:15833","UMLS:C3553414","DOID:0070282"],"synonyms":[{"name":"CEP135 autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH8","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in CEP135","type":"exact"},{"name":"microcephaly 8, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0013849","xrefs":{"Monarch":{"xref_id":"0013849"}}}


id: PR:O94461
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.21 gene.","definition_xrefs":["UniProtKB:O94461","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase C1687.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.21","synonyms":[{"name":"Spom972h-SPAC1687.21","type":"exact"}],"termid":"PR:O94461"}


id: PR:O59852
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- inv1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invertase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.11","synonyms":[{"name":"Saccharase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-inv1","type":"exact"},{"name":"beta-fructofuranosidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59852"}


id: GO:0036271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylphenidate stimulus.","definition_xrefs":["GOC:hp","Wikipedia:Methylphenidate"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methylphenidate","synonyms":[{"name":"response to MPD","type":"exact"},{"name":"response to MPH","type":"exact"},{"name":"response to ritalin","type":"exact"}],"termid":"GO:0036271"}


id: PBO:0079009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon TGT) 3-1","termid":"PBO:0079009"}


id: GO:0047597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-oxocineole + H+ + NADPH + O2 = 1,6,6-trimethyl-2,7-dioxabicyclo[3.2.2]nonan-3-one + H2O + NADP+.","definition_xrefs":["RHEA:24324","EC:1.14.13.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"6-oxocineole dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02995","MetaCyc:6-OXOCINEOLE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"6-oxocineole oxygenase activity","type":"related"},{"name":"6-oxocineole,NADPH:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047597"}


id: FYECO:0000413
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which valproic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ valproic acid","synonyms":[{"name":"valproic acid added","type":"exact"}],"termid":"FYECO:0000413"}


id: MONDO:0013929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the TSPEAR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 98","secondary_identifiers":["GARD:22644","UMLS:C3553932","MEDGEN:766846","DOID:0110540","OMIM:614861"],"synonyms":[{"name":"DFNB98","type":"narrow"},{"name":"TSPEAR autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 98","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 98","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in TSPEAR","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 98","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 98","type":"exact"},{"name":"deafness, autosomal recessive 98","type":"narrow"},{"name":"deafness, autosomal recessive type 98","type":"narrow"}],"termid":"MONDO:0013929","xrefs":{"Monarch":{"xref_id":"0013929"}}}


id: PR:Q9P7S8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23G3.05c gene.","definition_xrefs":["UniProtKB:Q9P7S8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rax1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.05c","synonyms":[{"name":"Spom972h-SPAC23G3.05c","type":"exact"}],"termid":"PR:Q9P7S8"}


id: MONDO:0017048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudomyxoma peritonei is characterized by disseminated intra-peritoneal mucinous tumors and mucinous ascites in the abdomen and pelvis.","definition_xrefs":["Orphanet:26790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous adenocarcinoma of the appendix","termid":"MONDO:0018330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pseudomyxoma peritonei","secondary_identifiers":["GARD:7488","ICDO:8480/6","NORD:1628","MESH:D011553","DOID:3559","NCIT:C3345","MedDRA:10037138","SCTID:307601000","UMLS:C0033822","MEDGEN:18726"],"synonyms":[{"name":"Adenomucinosis","type":"exact"},{"name":"Myxoma peritonei","type":"exact"},{"name":"PMP","type":"exact"},{"name":"gelatinous ascites","type":"exact"},{"name":"mucinous ascites","type":"exact"},{"name":"peritoneal cavity pseudomyxoma peritonei","type":"exact"},{"name":"pseudomyxoma peritonei","type":"exact"},{"name":"pseudomyxoma peritonei (morphologic abnormality)","type":"exact"},{"name":"syndrome of pseudomyxoma peritonei","type":"related"},{"name":"well differentiated peritoneal mucinous adenocarcinoma","type":"exact"}],"termid":"MONDO:0017048","xrefs":{"Monarch":{"xref_id":"0017048"}}}


id: FYPO:0003671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal ATP binding","termid":"FYPO:0003671"}


id: GO:0014008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of microglia differentiation, the process in which a relatively unspecialized cell acquires specialized features of a microglial cell.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microglia differentiation","termid":"GO:0014006"},{"relation_name":"is_a","term_name":"positive regulation of macrophage differentiation","termid":"GO:0045651"},{"relation_name":"is_a","term_name":"positive regulation of glial cell differentiation","termid":"GO:0045687"},{"relation_name":"positively_regulates","term_name":"microglia differentiation","termid":"GO:0014004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microglia differentiation","synonyms":[{"name":"activation of microglia differentiation","type":"narrow"},{"name":"positive regulation of microglial cell differentiation","type":"exact"},{"name":"stimulation of microglia differentiation","type":"narrow"},{"name":"up regulation of microglia differentiation","type":"exact"},{"name":"up-regulation of microglia differentiation","type":"exact"},{"name":"upregulation of microglia differentiation","type":"exact"}],"termid":"GO:0014008"}


id: PBO:0067025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 38, pseudogene","termid":"PBO:0067025"}


id: MOD:00775
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"An artifactual protein modification that converts an L-histidine residue to L-asparagine by oxidative degradation.","definition_xrefs":["OMSSA:54","PubMed:9252331","Unimod:348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-asparagine residue","termid":"MOD:00012"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine (His)","synonyms":[{"name":"His->Asn","type":"related"},{"name":"his2asnh","type":"exact"},{"name":"histidine oxidation to aspargine","type":"related"}],"termid":"MOD:00775"}


id: PBO:0076711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCF12 divergent transcript","termid":"PBO:0076711"}


id: PBO:0005906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino-acid permease, unknown","termid":"PBO:0005906"}


id: GO:0043477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pigment, any general or particular coloring matter in living organisms, resulting in pigment accumulation.","definition_xrefs":["GOC:jl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process involved in pigment accumulation","termid":"GO:0043475"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment biosynthetic process involved in pigment accumulation","synonyms":[{"name":"pigment biosynthetic process during pigment accumulation","type":"related"}],"termid":"GO:0043477"}


id: GO:0009343
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the formation of carboxybiotin-carboxyl-carrier protein from biotin-carboxyl-carrier protein and carbon dioxide (CO2).","definition_xrefs":["EC:6.3.4.14"],"gene_count":0,"genotype_count":0,"name":"obsolete biotin carboxylase complex (obsolete GO:0009343)","termid":"GO:0009343"}


id: PR:O14199
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-N-acetylglucosamine transferase subunit ALG14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12154:SF0","PRO:DNx","OMA:SCHPO00606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine transferase subunit alg14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.06c","secondary_identifiers":["UniProtKB:O14199"],"synonyms":[{"name":"Spom972h-ALG14","type":"exact"},{"name":"asparagine-linked glycosylation protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14199"}


id: PBO:0113410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L24A; forms two bridges within ribosome, stimulates translation initiation and elongation; homologous to mammalian ribosomal protein L24, no bacterial homolog; RPL24A has a paralog, RPL24B, that arose from the whole genome duplication","termid":"PBO:0113410"}


id: GO:0043181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting a substance into, and confining within, a vacuole.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"vacuolar sequestering","synonyms":[{"name":"retention in vacuole","type":"exact"},{"name":"sequestering in vacuole","type":"exact"},{"name":"sequestration in vacuole","type":"exact"},{"name":"storage in vacuole","type":"exact"},{"name":"vacuolar retention","type":"exact"},{"name":"vacuolar sequestration","type":"exact"},{"name":"vacuolar storage","type":"exact"}],"termid":"GO:0043181"}


id: GO:0034513
data:
  {"annotated_genes":["SJAG_01234","SJAG_00083","SJAG_04754","SJAG_00566"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74265,89803,95148,100966],"is_not":false,"summary":null,"term":"GO:0034513"}]},"cv_name":"molecular_function","definition":"Binding to a box H/ACA small nucleolar RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA binding","termid":"GO:0030515"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"box H/ACA snoRNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034513","terms_by_termid":{"GO:0034513":null}}


id: MONDO:0006623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune pancreatitis type 1 (obsolete MONDO:0006623)","termid":"MONDO:0006623","xrefs":{"Monarch":{"xref_id":"0006623"}}}


id: MOD:00745
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a selenium atom or a cluster containing selenium for hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenium containing residue","synonyms":[{"name":"SeRes","type":"exact"}],"termid":"MOD:00745"}


id: PBO:0088566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A catalytic subunit Ppa1/Ppa2","termid":"PBO:0088566"}


id: PBO:0116831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Msr1","termid":"PBO:0116831"}


id: GO:0031800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 3 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 3 metabotropic glutamate receptor binding","synonyms":[{"name":"type 3 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031800"}


id: PATO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is increased by a high degree.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased temperature","termid":"PATO:0001305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe increased temperature","termid":"PATO:0001317"}


id: MONDO:0033363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 54","secondary_identifiers":["MEDGEN:1392637","DOID:0080418","NORD:146101","OMIM:617391","GARD:16225","UMLS:C4479319"],"synonyms":[{"name":"DEE54","type":"exact"},{"name":"EIEE54","type":"exact"},{"name":"HNRNPU-Related Disorder","type":"exact"},{"name":"developmental and epileptic encephalopathy 54","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 54","type":"exact"}],"termid":"MONDO:0033363","xrefs":{"Monarch":{"xref_id":"0033363"}}}


id: RO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"RO:0002013"},{"relation_name":"is_a","term_name":"negatively_regulated_by","termid":"RO:0002335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_negative_regulatory_component_activity","termid":"RO:0002014"}


id: GO:0160018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of platelet rolling.","definition_xrefs":["GO_REF:0000058","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterotypic cell-cell adhesion","termid":"GO:0034116"},{"relation_name":"is_a","term_name":"regulation of platelet rolling","termid":"GO:0160017"},{"relation_name":"positively_regulates","term_name":"platelet rolling","termid":"GO:0160015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of platelet rolling","termid":"GO:0160018"}


id: GO:0004794
data:
  {"annotated_genes":["SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77339],"is_not":false,"summary":null,"term":"GO:0004794"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine = 2-oxobutanoate + NH4.","definition_xrefs":["EC:4.3.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"threonine deaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:THREDEHYD-RXN","UM-BBD_reactionID:r0433","RHEA:22108"],"synonyms":[{"name":"L-serine dehydratase activity","type":"related"},{"name":"L-threonine ammonia-lyase (2-oxobutanoate-forming)","type":"exact"},{"name":"L-threonine ammonia-lyase activity","type":"exact"},{"name":"L-threonine deaminase activity","type":"exact"},{"name":"L-threonine dehydratase activity","type":"exact"},{"name":"L-threonine hydro-lyase (deaminating) activity","type":"related"},{"name":"serine deaminase activity","type":"related"},{"name":"threonine ammonia-lyase activity","type":"broad"},{"name":"threonine dehydrase activity","type":"exact"},{"name":"threonine dehydratase activity","type":"broad"}],"termid":"GO:0004794","terms_by_termid":{"GO:0004794":null}}


id: MOD:01969
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(gamma-glutamyl-cysteinyl-glycyl)-cysteine.","definition_xrefs":["RESID:AA0611","PubMed:9398217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(gamma-glutamyl-cysteinyl-glycyl)-cysteine","synonyms":[{"name":"(2S)-2-amino-5-([(2R)-1-([2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-2-oxoethyl]amino)-1-oxo-3-sulfanylpropan-2-yl]amino)-5-oxopentanoic acid","type":"exact"},{"name":"ACT_SITE S-(gamma-glutamyl-cysteinyl-glycyl)-cysteine intermediate","type":"exact"},{"name":"S-(gamma-glutamyl-cysteinyl-glycyl)-cysteine","type":"exact"},{"name":"S-(glutathion-1-yl)-L-cysteine","type":"exact"}],"termid":"MOD:01969"}


id: SO:1001264
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoded_mRNA where translation was suspended at a particular codon and resumed at a particular non-overlapping downstream codon.","direct_ancestors":[{"relation_name":"has_quality","term_name":"recoded_by_translational_bypass","termid":"SO:0000886"},{"relation_name":"is_a","term_name":"recoded_mRNA","termid":"SO:1001261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_recoded_by_translational_bypass","synonyms":[{"name":"mRNA recoded by translational bypass","type":"exact"}],"termid":"SO:1001264"}


id: FYPO:0001419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grows at the same rate as wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell population","termid":"FYPO:0002058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"normal cell population growth rate","synonyms":[{"name":"normal cell population proliferation","type":"related"},{"name":"normal cell proliferation","type":"related"},{"name":"normal growth rate","type":"broad"}],"termid":"FYPO:0001419"}


id: MONDO:0032724
data:
  {"annotated_genes":["SJAG_03864"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85934],"is_not":false,"summary":null,"term":"MONDO:0032724"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia with joint laxity","termid":"MONDO:0019675"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03864":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia with joint laxity, type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112200","UMLS:C5193073","OMIM:618395","GARD:16348","MEDGEN:1677378","Orphanet:642085"],"synonyms":[{"name":"SEMDJL3","type":"exact"},{"name":"SPONDYLOEPIMETAPHYSEAL DYSPLASIA WITH JOINT LAXITY, TYPE 3","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, EXOC6b type","type":"exact"}],"termid":"MONDO:0032724","terms_by_termid":{"MONDO:0032724":null},"xrefs":{"Monarch":{"xref_id":"0032724"}}}


id: MONDO:0018561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precocious puberty that involves the female organism.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"precocious puberty","termid":"MONDO:0000088"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"precocious puberty in female","secondary_identifiers":["Orphanet:435561","GARD:21807","HP:0010465","UMLS:C0271616","MEDGEN:543449"],"synonyms":[{"name":"female organism precocious puberty","type":"exact"},{"name":"precocious puberty of female organism","type":"exact"}],"termid":"MONDO:0018561","xrefs":{"Monarch":{"xref_id":"0018561"}}}


id: GO:0097518
data:
  {"annotated_genes":["SJAG_02864","SJAG_00938","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107920,119370,98084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070648"}]},"cv_name":"cellular_component","definition":"An actin filament bundle in which the filaments are tightly packed (approximately 10-20 nm apart) and oriented with the same polarity.","definition_xrefs":["ISBN:0815316194","GOC:cjm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle","termid":"GO:0032432"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"parallel actin filament bundle","references_by_uniquename":{"GO_REF:0000107":null,"PMID:36148799":null},"termid":"GO:0097518","terms_by_termid":{"GO:0070648":null}}


id: PBO:0029220
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_glucose_stimulus","termid":"PBO:0029220"}


id: PBO:0070828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 7","termid":"PBO:0070828"}


id: PBO:0063846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase inhibitor 16","termid":"PBO:0063846"}


id: PBO:0000532
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Catastrophe Suppressor","termid":"PBO:0000532"}


id: PBO:0005623
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.9","termid":"PBO:0005623"}


id: MOD:00899
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-palmitoyl-S-diacylglycerol-L-cysteine.","definition_xrefs":["RESID:AA0107#var","RESID:AA0069#var"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"N-palmitoyl-L-cysteine","termid":"MOD:00069"},{"relation_name":"has_functional_parent","term_name":"S-diacylglycerol-L-cysteine","termid":"MOD:00116"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-palmitoyl-S-diacylglycerol-L-cysteine","termid":"MOD:00899"}


id: GO:0120112
data:
  {"annotated_genes":["SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112166],"is_not":false,"summary":null,"term":"GO:0120112"}]},"cv_name":"biological_process","definition":"The directed movement of UDP-glucose from cytosol to endoplasmic reticulum.","definition_xrefs":["PMID:27587357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucose transmembrane transport","termid":"GO:0015786"},{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"UDP-glucose transmembrane transport into endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120112","terms_by_termid":{"GO:0120112":null}}


id: GO:0070867
data:
  {"annotated_genes":["SJAG_02924","SJAG_02351"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96160,109988],"is_not":false,"summary":null,"term":"GO:0070867"}]},"cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a mating projection tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane of cell tip","termid":"GO:0031520"},{"relation_name":"part_of","term_name":"mating projection tip","termid":"GO:0043332"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02351":null,"SJAG_02924":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"mating projection tip membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mating projection membrane fusion domain","type":"exact"},{"name":"shmoo tip membrane","type":"narrow"}],"termid":"GO:0070867","terms_by_termid":{"GO:0070867":null}}


id: FYPO:0009089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of sodium chloride and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to sodium chloride and sodium dodecyl sulfate","synonyms":[{"name":"resistance to sodium chloride and SDS","type":"exact"},{"name":"resistance to sodium chloride and SDS during vegetative growth","type":"exact"},{"name":"resistance to sodium chloride and SDS in combination","type":"exact"},{"name":"resistance to sodium chloride and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to sodium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to sodium chloride and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to sodium chloride and SDS","type":"exact"},{"name":"resistant to sodium chloride and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009089"}


id: GO:0050513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + UDP-alpha-D-xylose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-[beta-D-xylosyl-(1->2)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + H+ + UDP.","definition_xrefs":["EC:2.4.2.38","RHEA:10612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycoprotein 2-beta-D-xylosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.2.38-RXN","KEGG_REACTION:R06016"],"synonyms":[{"name":"1,2-beta-xylosyltransferase activity","type":"related"},{"name":"beta-1,2-xylosyltransferase activity","type":"related"},{"name":"glycoprotein 2-b-D-xylosyltransferase activity","type":"exact"}],"termid":"GO:0050513"}


id: FYPO:0000070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of amphotericin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to amphotericin B","synonyms":[{"name":"resistance to amphotericin B during mitotic cell cycle","type":"related"},{"name":"resistance to amphotericin B during vegetative growth","type":"exact"},{"name":"resistant to amphotericin","type":"exact"}],"termid":"FYPO:0000070"}


id: PR:Q09188
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- anc1 gene.","definition_xrefs":["UniProtKB:Q09188","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP,ATP carrier protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.10c","synonyms":[{"name":"ADP/ATP translocase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ANT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-anc1","type":"exact"},{"name":"adenine nucleotide translocator (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09188"}


id: PBO:0082320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase involved in protein folding and the response to stress; plays a role in SRP-dependent cotranslational protein-membrane targeting and translocation; member of the heat shock protein 70 (HSP70) family; localized to the cytoplasm; SSA3 has a paralog, SSA4, that arose from the whole genome duplication","termid":"PBO:0082320"}


id: PBO:0017005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu25","termid":"PBO:0017005"}


id: GO:0043793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + 5-phospho-alpha-D-ribose 1-diphosphate + H+ = 4-(beta-D-ribofuranosyl)phenol 5'-phosphate + CO2 + diphosphate. Both 4-hydroxybenzoate and 4-aminobenzoate may be used as substrates, but only the former is known to be produced by methanogenic archaea.","definition_xrefs":["EC:2.4.2.54","PMID:12142414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"beta-ribofuranosylaminobenzene 5'-phosphate synthase activity","synonyms":[{"name":"beta-RFAP synthase activity","type":"exact"}],"termid":"GO:0043793"}


id: PBO:0077089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 4","termid":"PBO:0077089"}


id: GO:0071995
data:
  {"annotated_genes":["SJAG_05213","SJAG_03497","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95863,118000,96849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"}]},"cv_name":"biological_process","definition":"The directed movement of phytochelatins into the vacuole. Phytochelatins are a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"phytochelatin transmembrane transport","termid":"GO:0071994"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03497":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"phytochelatin import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadystin import into vacuole","type":"related"},{"name":"phytochelatin transport into vacuole","type":"exact"}],"termid":"GO:0071995","terms_by_termid":{"GO:0036246":null}}


id: PBO:0002302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin fold protein Plp1 (predicted)","termid":"PBO:0002302"}


id: PBO:0080169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 4","termid":"PBO:0080169"}


id: PBO:0052489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 3","termid":"PBO:0052489"}


id: PBO:0059641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 7","termid":"PBO:0059641"}


id: PBO:0066720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 17","termid":"PBO:0066720"}


id: GO:0034022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxyaminophenol = aminohydroquinone.","definition_xrefs":["EC:5.4.4.3","RHEA:20577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-(hydroxyamino)phenol mutase activity","secondary_identifiers":["UM-BBD_enzymeID:r1496","MetaCyc:5.4.4.3-RXN","KEGG_REACTION:R06988"],"synonyms":[{"name":"3-(hydroxyamino)phenol hydroxymutase activity","type":"related"},{"name":"3-hydroxylaminophenol mutase activity","type":"related"},{"name":"3HAP mutase activity","type":"related"}],"termid":"GO:0034022"}


id: GO:0010384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cell wall peptidoglycan, a group of glycoproteins that consist of a core-protein backbone O-glycosylated by one or more complex carbohydrates.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"},{"relation_name":"is_a","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall proteoglycan metabolic process","synonyms":[{"name":"cell wall proteoglycan metabolism","type":"exact"}],"termid":"GO:0010384"}


id: GO:0004133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of branch points in branched glycogen polymers.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity","termid":"GO:0003824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycogen debranching enzyme activity","termid":"GO:0004133"}


id: PBO:0070637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 8","termid":"PBO:0070637"}


id: GO:0006605
data:
  {"annotated_genes":["SJAG_02693","SJAG_01879","SJAG_01615","SJAG_02524","SJAG_02354","SJAG_02867","SJAG_02320","SJAG_03737","SJAG_03396","SJAG_01299","SJAG_02330","SJAG_01780","SJAG_01733","SJAG_04996","SJAG_01004","SJAG_04533","SJAG_03315","SJAG_04451","SJAG_01112","SJAG_02809","SJAG_01496","SJAG_07010","SJAG_01951","SJAG_00373","SJAG_04763","SJAG_03781","SJAG_00895","SJAG_01597","SJAG_01949","SJAG_03955","SJAG_00564","SJAG_00175","SJAG_03358","SJAG_03416","SJAG_00603","SJAG_00204","SJAG_01750","SJAG_01367","SJAG_16459","SJAG_03976","SJAG_04432","SJAG_05259","SJAG_04208","SJAG_01488","SJAG_01229","SJAG_00108","SJAG_04552","SJAG_03560","SJAG_01442","SJAG_01647","SJAG_02917","SJAG_02016","SJAG_03515","SJAG_03970","SJAG_00569","SJAG_03411","SJAG_02456","SJAG_00326","SJAG_01759","SJAG_04129","SJAG_00360","SJAG_01349","SJAG_00380","SJAG_00208","SJAG_01840","SJAG_04014","SJAG_01560","SJAG_01282","SJAG_00891","SJAG_04336","SJAG_01120","SJAG_01782","SJAG_03250","SJAG_02397","SJAG_01527","SJAG_05210","SJAG_03385","SJAG_01641","SJAG_01281","SJAG_01640","SJAG_02355","SJAG_02361","SJAG_02208","SJAG_02034","SJAG_04641","SJAG_04218","SJAG_01684","SJAG_00687","SJAG_01981","SJAG_00181","SJAG_00064","SJAG_02077","SJAG_03648","SJAG_01088","SJAG_02398","SJAG_01558","SJAG_02588","SJAG_03415","SJAG_00404","SJAG_03684","SJAG_04072","SJAG_01360","SJAG_02797","SJAG_00959","SJAG_00196","SJAG_03502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006613"},{"annotations":[90861,87877,91431,105559,114240,113099,87799,91296,87912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[96931,94843,98290],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"},{"annotations":[69693,95527,79207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[73016,80169,73328,72973,97848,97131,108105],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[76944,77407],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045041"},{"annotations":[90689,111591,99046,96680,94311,100119,117044,104989,99344,102491,116575,89327,88119,109671,115022,107385,99230,103076,107306,107363,105975],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030150"},{"annotations":[116059,75419,102717,90182,107386,88445,73296,77620,107364,73784,112987],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045039"},{"annotations":[109842,98031,76363,58881,110193,98382,111585,69744,107365],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045040"},{"annotations":[80041,69614,102005,76654,77872,79767],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[98215,69324,68957,87434,98166,112352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045047"},{"annotations":[60173,70873,72652,74748,74820,75890,95691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006612"},{"annotations":[98196,102255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"},{"annotations":[95220,96754,90228,102888,90220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006625"},{"annotations":[90797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[71003,77426,73846,80073,96343,77864,75422,77037,76993,72593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[68702,94074,72763,69692,66165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[114155,114923,91424],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[108107,102379,75234,73326,73014,97850],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The process of targeting specific proteins to particular regions of the cell, typically membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization","termid":"GO:0045184"}],"gene_count":106,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00108":null,"SJAG_00175":null,"SJAG_00181":null,"SJAG_00196":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00326":null,"SJAG_00360":null,"SJAG_00373":null,"SJAG_00380":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00603":null,"SJAG_00687":null,"SJAG_00891":null,"SJAG_00895":null,"SJAG_00959":null,"SJAG_01004":null,"SJAG_01088":null,"SJAG_01112":null,"SJAG_01120":null,"SJAG_01229":null,"SJAG_01281":null,"SJAG_01282":null,"SJAG_01299":null,"SJAG_01349":null,"SJAG_01360":null,"SJAG_01367":null,"SJAG_01442":null,"SJAG_01488":null,"SJAG_01496":null,"SJAG_01527":null,"SJAG_01558":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01641":null,"SJAG_01647":null,"SJAG_01684":null,"SJAG_01733":null,"SJAG_01750":null,"SJAG_01759":null,"SJAG_01780":null,"SJAG_01782":null,"SJAG_01840":null,"SJAG_01879":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_01981":null,"SJAG_02016":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02320":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02456":null,"SJAG_02524":null,"SJAG_02588":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02867":null,"SJAG_02917":null,"SJAG_03250":null,"SJAG_03315":null,"SJAG_03358":null,"SJAG_03385":null,"SJAG_03396":null,"SJAG_03411":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03648":null,"SJAG_03684":null,"SJAG_03737":null,"SJAG_03781":null,"SJAG_03955":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04014":null,"SJAG_04072":null,"SJAG_04129":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04451":null,"SJAG_04533":null,"SJAG_04552":null,"SJAG_04641":null,"SJAG_04763":null,"SJAG_04996":null,"SJAG_05210":null,"SJAG_05259":null,"SJAG_07010":null,"SJAG_16459":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein targeting","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Protein_targeting"],"synonyms":[{"name":"nascent polypeptide association","type":"related"},{"name":"protein sorting along secretory pathway","type":"narrow"}],"termid":"GO:0006605","terms_by_termid":{"GO:0006612":null,"GO:0006613":null,"GO:0006614":null,"GO:0006616":null,"GO:0006617":null,"GO:0006620":null,"GO:0006623":null,"GO:0006625":null,"GO:0006626":null,"GO:0006627":null,"GO:0030150":null,"GO:0031204":null,"GO:0044395":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0045047":null,"GO:0120113":null,"GO:0160203":null}}


id: GO:0098811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II activating transcription factor and also with the RNA polymerase II basal transcription machinery in order to stop, prevent, or reduce the frequency, rate or extent of transcription.","definition_xrefs":["GOC:txnOH","GOC:dos","GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional repressor activity, RNA polymerase II activating transcription factor binding (obsolete GO:0098811)","synonyms":[{"name":"RNA polymerase II activating transcription factor binding transcription factor activity involved in negative regulation of transcription","type":"exact"},{"name":"RNA polymerase II activating transcription factor binding transcription repressor activity","type":"exact"},{"name":"RNA polymerase II transcription repressor activity","type":"broad"}],"termid":"GO:0098811"}


id: PBO:0025418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluoride channel Fex1","termid":"PBO:0025418"}


id: GO:0034072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: squalene = triterpene.","definition_xrefs":["PMID:18033581","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0009975","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"squalene cyclase activity","termid":"GO:0034072"}


id: PBO:0089702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycoside Hydrolase family protein Gls1","termid":"PBO:0089702"}


id: GO:0120292
data:
  {"annotated_genes":["SJAG_03300","SJAG_02214","SJAG_01584"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88787,105931,116211],"is_not":false,"summary":null,"term":"GO:0120292"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic recombination-dependent replication fork processing. Regulation of mitotic recombination prevents recombination between inappropriate homologous sequences. Proteins involved in homologous recombination are required for replication restart.","definition_xrefs":["GOC:krc","PMID:23093942","PMID:28586299","GOC:mah","PMID:31149897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of mitotic recombination-dependent replication fork processing","termid":"GO:1903221"},{"relation_name":"positively_regulates","term_name":"mitotic recombination-dependent replication fork processing","termid":"GO:1990426"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01584":null,"SJAG_02214":null,"SJAG_03300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic recombination-dependent replication fork processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of homologous recombination dependent replication fork recovery","type":"related"},{"name":"positive regulation of mitotic recombination involved in replication fork processing","type":"related"},{"name":"positive regulation of recombination-dependent DNA replication","type":"exact"}],"termid":"GO:0120292","terms_by_termid":{"GO:0120292":null}}


id: MOD:01690
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-[(12R)-12-hydroxymyristoyl]-L-cysteine.","definition_xrefs":["RESID:AA0516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-[(12R)-12-hydroxymyristoyl]-L-cysteine","synonyms":[{"name":"2-[(12R)-12-hydroxytetradecanoyl]amino-3-sulfanylpropanoic acid","type":"exact"},{"name":"LIPID N-[(12R)-12-hydroxymyristoyl]cysteine","type":"exact"},{"name":"N-[(12R)-12-hydroxymyristoyl]-L-cysteine","type":"exact"},{"name":"N-[(12R)-12-hydroxytetradecanoyl]cysteine","type":"exact"}],"termid":"MOD:01690"}


id: PBO:0073300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 22","termid":"PBO:0073300"}


id: GO:0046553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-malate + NAD+ = CO2 + NADH + pyruvate.","definition_xrefs":["RHEA:18365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-malate dehydrogenase (decarboxylating) (NAD+) activity","secondary_identifiers":["MetaCyc:1.1.1.83-RXN","KEGG_REACTION:R00215","EC:1.1.1.83"],"synonyms":[{"name":"(R)-malate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"D-malate dehydrogenase activity","type":"related"},{"name":"D-malic enzyme","type":"related"},{"name":"bifunctional L(+)-tartrate dehydrogenase-D(+)-malate (decarboxylating)","type":"related"}],"termid":"GO:0046553"}


id: MONDO:1011354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reproductive system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354","xrefs":{"Monarch":{"xref_id":"1011354"}}}


id: SO:0000510
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in partially rearranged genomic DNA including L-part1, V-intron and V-D-exon, with the 5' UTR (SO:0000204) and 3' UTR (SO:0000205).","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VD_gene_segment","synonyms":[{"name":"VD gene","type":"exact"},{"name":"V_D_GENE","type":"exact"}],"termid":"SO:0000510"}


id: PBO:0057806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3128","termid":"PBO:0057806"}


id: MONDO:0019119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A channelopathy that involves the muscle tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular disease","termid":"MONDO:0019056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular channelopathy","secondary_identifiers":["UMLS:C5681306","Orphanet:71864","GARD:18917","MEDGEN:1842600"],"synonyms":[{"name":"channelopathy of muscle tissue","type":"exact"},{"name":"muscle tissue channelopathy","type":"exact"}],"termid":"MONDO:0019119","xrefs":{"Monarch":{"xref_id":"0019119"}}}


id: MONDO:0004704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal disease (obsolete MONDO:0004704)","termid":"MONDO:0004704","xrefs":{"Monarch":{"xref_id":"0004704"}}}


id: MONDO:0021465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the vermiform appendix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendiceal neoplasm","termid":"MONDO:0001236"},{"relation_name":"is_a","term_name":"benign neoplasm of cecum","termid":"MONDO:0021464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of appendix","secondary_identifiers":["icd11.foundation:7146014","NCIT:C4773","ICD10CM:D12.1","MEDGEN:99221","SCTID:91981009","UMLS:C0496860"],"synonyms":[{"name":"benign appendix neoplasm","type":"exact"},{"name":"benign appendix tumor","type":"exact"},{"name":"benign appendix tumour","type":"exact"},{"name":"benign neoplasm of the appendix","type":"exact"},{"name":"benign tumor of appendix","type":"exact"},{"name":"benign tumor of the appendix","type":"exact"},{"name":"benign tumour of appendix","type":"exact"},{"name":"benign tumour of the appendix","type":"exact"},{"name":"vermiform appendix benign neoplasm","type":"exact"}],"termid":"MONDO:0021465","xrefs":{"Monarch":{"xref_id":"0021465"}}}


id: PBO:0005393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set9","termid":"PBO:0005393"}


id: PBO:0075018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-29","termid":"PBO:0075018"}


id: PBO:0071194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 35","termid":"PBO:0071194"}


id: MONDO:1040026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that has spread to the brain from another anatomic site.","definition_xrefs":["PMID:29262201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"},{"relation_name":"is_a","term_name":"metastatic malignant neoplasm","termid":"MONDO:0024880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic malignant neoplasm in the brain","secondary_identifiers":["MEDGEN:113095","UMLS:C0220650"],"termid":"MONDO:1040026","xrefs":{"Monarch":{"xref_id":"1040026"}}}


id: GO:0009079
data:
  {"annotated_genes":["SJAG_06635","SJAG_03562","SJAG_03985","SJAG_04149","SJAG_03243","SJAG_00396","SJAG_04098","SJAG_02841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74483,103089,59224,113045,90479,76917,79762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"},{"annotations":[79763,63848,76627,58595,75911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009099"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any amino acid that requires pyruvate for its synthesis, e.g. alanine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyruvate family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyruvate family amino acid anabolism","type":"exact"},{"name":"pyruvate family amino acid biosynthesis","type":"exact"},{"name":"pyruvate family amino acid formation","type":"exact"},{"name":"pyruvate family amino acid synthesis","type":"exact"}],"termid":"GO:0009079","terms_by_termid":{"GO:0009098":null,"GO:0009099":null}}


id: PBO:0044542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino acid oxidase activator","termid":"PBO:0044542"}


id: PBO:0029600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sodium:hydrogen_antiporter_activity","termid":"PBO:0029600"}


id: MONDO:0001147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality in which the meninges protrude through a defect in the spinal column or the cranium.","definition_xrefs":["NCIT:C105595"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spina bifida","termid":"MONDO:0008449"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"meningocele","secondary_identifiers":["MESH:D008588","NCIT:C101209","DOID:1088","HP:0002435","MEDGEN:44356","SCTID:171131006","Orphanet:93968","UMLS:C0025299"],"synonyms":[{"name":"central nervous system meningocele","type":"exact"},{"name":"meningocele","type":"exact"},{"name":"meningocele (disease)","type":"exact"},{"name":"spinal meningocele","type":"narrow"}],"termid":"MONDO:0001147","xrefs":{"Monarch":{"xref_id":"0001147"}}}


id: PBO:0055842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRIG2 divergent transcript","termid":"PBO:0055842"}


id: PBO:0057624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1197","termid":"PBO:0057624"}


id: FYPO:0004958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in the mitochondrion differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"altered level of substance in mitochondrion","termid":"FYPO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered RNA level in mitochondrion","synonyms":[{"name":"abnormal RNA level in mitochondrion","type":"exact"},{"name":"abnormal RNA level in mitochondrion during vegetative growth","type":"exact"},{"name":"abnormal mitochondrial RNA level","type":"exact"},{"name":"abnormal mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"altered RNA level in mitochondrion during mitotic cell cycle","type":"related"},{"name":"altered mitochondrial RNA level","type":"exact"},{"name":"altered transcript level in mitochondrion","type":"exact"}],"termid":"FYPO:0004958"}


id: PBO:0045429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like C-mannosyltransferase 1","termid":"PBO:0045429"}


id: PBO:0001282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein","termid":"PBO:0001282"}


id: PBO:0039296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG10 alpha-1,2-glucosyltransferase B","termid":"PBO:0039296"}


id: PBO:0090670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial CH-OH group oxidoreductase, human RTN4IP1 ortholog, implicated in mitochondrial organization or tethering","termid":"PBO:0090670"}


id: FYPO:0003598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is decreased.","definition_xrefs":["GO:0034472","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal snRNA 3'-end processing","termid":"FYPO:0003596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased snRNA 3'-end processing","synonyms":[{"name":"decreased snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"decreased snRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"reduced snRNA 3'-end processing","type":"exact"}],"termid":"FYPO:0003598"}


id: MONDO:0100296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Olmsted syndrome in which the cause of the disease is a variation in the TRPV3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Olmsted syndrome","termid":"MONDO:0031421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Olmsted syndrome 1","secondary_identifiers":["DOID:0112013","GARD:15818","UMLS:C5542829","OMIM:614594","MEDGEN:1778121"],"synonyms":[{"name":"Olmsted syndrome","type":"broad"},{"name":"palmoplantar keratoderma, mutilating, with periorificial keratotic plaques 1","type":"exact"}],"termid":"MONDO:0100296","xrefs":{"Monarch":{"xref_id":"0100296"}}}


id: MONDO:0859290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoalphalipoproteinemia","termid":"MONDO:0017773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial apolipoprotein gene cluster deletion syndrome","secondary_identifiers":["MEDGEN:1824091","OMIM:620058","UMLS:C5774318"],"termid":"MONDO:0859290","xrefs":{"Monarch":{"xref_id":"0859290"}}}


id: PBO:0034418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_indirect_input_(obsolete_has_indirect_input)","termid":"PBO:0034418"}


id: FYPO:0006917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the metaphase/anaphase transition of mitosis begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cell cycle phase transition","termid":"FYPO:0006916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal onset of mitotic metaphase/anaphase transition","synonyms":[{"name":"normal duration of metaphase during mitosis","type":"related"},{"name":"normal duration of mitotic metaphase","type":"related"},{"name":"normal onset of metaphase/anaphase transition of mitotic nuclear division","type":"exact"},{"name":"normal timing of mitotic metaphase/anaphase transition","type":"related"}],"termid":"FYPO:0006917"}


id: MONDO:0030029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, mild, with joint laxity and advanced bone age","secondary_identifiers":["MEDGEN:1711043","OMIM:618870","UMLS:C5394341"],"synonyms":[{"name":"SDJLABA","type":"exact"},{"name":"SKELETAL DYSPLASIA, MILD, WITH JOINT LAXITY AND ADVANCED BONE AGE","type":"exact"},{"name":"skeletal dysplasia, mild, with joint laxity and advanced bone age","type":"exact"}],"termid":"MONDO:0030029","xrefs":{"Monarch":{"xref_id":"0030029"}}}


id: GO:0051545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of elastin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of elastin biosynthetic process","termid":"GO:0051543"},{"relation_name":"negatively_regulates","term_name":"elastin biosynthetic process","termid":"GO:0051542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of elastin biosynthetic process","synonyms":[{"name":"down regulation of elastin biosynthetic process","type":"exact"},{"name":"down-regulation of elastin biosynthetic process","type":"exact"},{"name":"downregulation of elastin biosynthetic process","type":"exact"},{"name":"inhibition of elastin biosynthetic process","type":"narrow"}],"termid":"GO:0051545"}


id: GO:0038123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding of a heterodimeric TLR1:TLR2 complex, followed by transmission of the signal by the activated receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:17318230","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor TLR1:TLR2 signaling pathway","secondary_identifiers":["Reactome:R-HSA-168179"],"synonyms":[{"name":"TLR2:TLR1 signaling pathway","type":"exact"},{"name":"toll-like receptor TLR1:TLR2 signalling pathway","type":"exact"}],"termid":"GO:0038123"}


id: GO:1902161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cyclic nucleotide-gated ion channel activity.","definition_xrefs":["GOC:TermGenie","PMID:11420311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"regulation of cyclic nucleotide-gated ion channel activity","termid":"GO:1902159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of cyclic nucleotide-gated ion channel activity","synonyms":[{"name":"activation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"activation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"activation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"activation of cyclic nucleotide-gated ion channel activity","type":"narrow"},{"name":"positive regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"positive regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"positive regulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"up regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"up regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"up regulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"up regulation of cyclic nucleotide-gated ion channel activity","type":"exact"},{"name":"up-regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"up-regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"up-regulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"up-regulation of cyclic nucleotide-gated ion channel activity","type":"exact"},{"name":"upregulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"upregulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"upregulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"upregulation of cyclic nucleotide-gated ion channel activity","type":"exact"}],"termid":"GO:1902161"}


