# terms

id: GO:0061299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the vasculature of the retina is generated and organized.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"retina vasculature development in camera-type eye","termid":"GO:0061298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina vasculature morphogenesis in camera-type eye","synonyms":[{"name":"retinal vasculature morphogenesis","type":"exact"}],"termid":"GO:0061299"}


id: GO:0008985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyruvate + ferricytochrome b1 + H2O = CO2 + acetate + ferrocytochrome b1.","definition_xrefs":["EC:1.2.2.2"],"gene_count":0,"genotype_count":0,"name":"obsolete pyruvate dehydrogenase (cytochrome) activity (obsolete GO:0008985)","synonyms":[{"name":"pyruvate dehydrogenase (cytochrome) activity","type":"exact"},{"name":"pyruvate:ferricytochrome-b1 oxidoreductase activity","type":"related"},{"name":"pyruvate:ubiquinone-8-oxidoreductase activity","type":"related"},{"name":"pyruvic (cytochrome b1) dehydrogenase activity","type":"related"}],"termid":"GO:0008985"}


id: PBO:0079273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39D, pseudogene","termid":"PBO:0079273"}


id: PBO:0079922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urate (hydroxyiso-) hydrolase, pseudogene","termid":"PBO:0079922"}


id: GO:1902730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23212449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"positively_regulates","term_name":"proteoglycan biosynthetic process","termid":"GO:0030166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of proteoglycan biosynthetic process","synonyms":[{"name":"activation of proteoglycan anabolism","type":"narrow"},{"name":"activation of proteoglycan biosynthesis","type":"narrow"},{"name":"activation of proteoglycan biosynthetic process","type":"narrow"},{"name":"activation of proteoglycan formation","type":"narrow"},{"name":"activation of proteoglycan synthesis","type":"narrow"},{"name":"positive regulation of proteoglycan anabolism","type":"exact"},{"name":"positive regulation of proteoglycan biosynthesis","type":"exact"},{"name":"positive regulation of proteoglycan formation","type":"exact"},{"name":"positive regulation of proteoglycan synthesis","type":"exact"},{"name":"up regulation of proteoglycan anabolism","type":"exact"},{"name":"up regulation of proteoglycan biosynthesis","type":"exact"},{"name":"up regulation of proteoglycan biosynthetic process","type":"exact"},{"name":"up regulation of proteoglycan formation","type":"exact"},{"name":"up regulation of proteoglycan synthesis","type":"exact"},{"name":"up-regulation of proteoglycan anabolism","type":"exact"},{"name":"up-regulation of proteoglycan biosynthesis","type":"exact"},{"name":"up-regulation of proteoglycan biosynthetic process","type":"exact"},{"name":"up-regulation of proteoglycan formation","type":"exact"},{"name":"up-regulation of proteoglycan synthesis","type":"exact"},{"name":"upregulation of proteoglycan anabolism","type":"exact"},{"name":"upregulation of proteoglycan biosynthesis","type":"exact"},{"name":"upregulation of proteoglycan biosynthetic process","type":"exact"},{"name":"upregulation of proteoglycan formation","type":"exact"},{"name":"upregulation of proteoglycan synthesis","type":"exact"}],"termid":"GO:1902730"}


id: MONDO:0013191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the INF2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 5","secondary_identifiers":["MESH:C567687","UMLS:C2750475","DOID:0111130","GARD:15636","MEDGEN:413315","OMIM:613237"],"synonyms":[{"name":"FSGS5","type":"exact"},{"name":"INF2 focal segmental glomerulosclerosis","type":"exact"},{"name":"focal segmental glomerulosclerosis 5","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in INF2","type":"exact"},{"name":"focal segmental glomerulosclerosis type 5","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 5","type":"related"}],"termid":"MONDO:0013191","xrefs":{"Monarch":{"xref_id":"0013191"}}}


id: GO:0003130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to heart induction.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in heart induction (obsolete GO:0003130)","synonyms":[{"name":"BMP signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0003130"}


id: PBO:0109369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 4C","termid":"PBO:0109369"}


id: GO:0047294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + sn-glycerol 1-phosphate = diphosphate + sn-3-O-(geranylgeranyl)glycerol 1-phosphate.","definition_xrefs":["PMID:12801917","PMID:17253090","PMID:8408023","RHEA:23404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphoglycerol geranylgeranyltransferase activity","secondary_identifiers":["MetaCyc:2.5.1.41-RXN","KEGG_REACTION:R04158","EC:2.5.1.41"],"synonyms":[{"name":"(S)-3-O-geranylgeranylglyceryl phosphate synthase activity","type":"exact"},{"name":"GGGP synthase activity","type":"exact"},{"name":"GGGPS activity","type":"exact"},{"name":"geranylgeranyl diphosphate:sn-glyceryl phosphate geranylgeranyltransferase activity","type":"related"},{"name":"geranylgeranyl-transferase activity","type":"related"},{"name":"glycerol phosphate geranylgeranyltransferase activity","type":"related"}],"termid":"GO:0047294"}


id: GO:0120215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of histidine biosynthetic process.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of histidine biosynthetic process","termid":"GO:0120213"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"L-histidine biosynthetic process","termid":"GO:0000105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"positive regulation of histidine biosynthetic process","synonyms":[{"name":"activation of histidine anabolism","type":"narrow"},{"name":"activation of histidine biosynthesis","type":"narrow"},{"name":"activation of histidine biosynthetic process","type":"narrow"},{"name":"activation of histidine formation","type":"narrow"},{"name":"activation of histidine synthesis","type":"narrow"},{"name":"positive regulation of histidine anabolism","type":"exact"},{"name":"positive regulation of histidine biosynthesis","type":"exact"},{"name":"positive regulation of histidine formation","type":"exact"},{"name":"positive regulation of histidine synthesis","type":"exact"},{"name":"up regulation of histidine anabolism","type":"exact"},{"name":"up regulation of histidine biosynthesis","type":"exact"},{"name":"up regulation of histidine biosynthetic process","type":"exact"},{"name":"up regulation of histidine formation","type":"exact"},{"name":"up regulation of histidine synthesis","type":"exact"},{"name":"up-regulation of histidine anabolism","type":"exact"},{"name":"up-regulation of histidine biosynthesis","type":"exact"},{"name":"up-regulation of histidine biosynthetic process","type":"exact"},{"name":"up-regulation of histidine formation","type":"exact"},{"name":"up-regulation of histidine synthesis","type":"exact"},{"name":"upregulation of histidine anabolism","type":"exact"},{"name":"upregulation of histidine biosynthesis","type":"exact"},{"name":"upregulation of histidine biosynthetic process","type":"exact"},{"name":"upregulation of histidine formation","type":"exact"},{"name":"upregulation of histidine synthesis","type":"exact"}],"termid":"GO:0120215"}


id: GO:0035933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any glucocorticoid hormone into the circulatory system. Glucocorticoids are a class of steroid hormones that regulate a variety of physiological processes, in particular control of the concentration of glucose in blood.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"glucocorticoid secretion","termid":"GO:0035933"}


id: SO:0000393
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U4 small nuclear RNA (U4 snRNA) is a component of the major U2-dependent spliceosome. It forms a duplex with U6, and with each splicing round, it is displaced from U6 (and the spliceosome) in an ATP-dependent manner, allowing U6 to refold and create the active site for splicing catalysis. A recycling process involving protein Prp24 re-anneals U4 and U6.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U4_snRNA"],"synonyms":[{"name":"U4 small nuclear RNA","type":"exact"},{"name":"U4 snRNA","type":"exact"},{"name":"small nuclear RNA U4","type":"exact"},{"name":"snRNA U4","type":"exact"}],"termid":"SO:0000393"}


id: PR:O94580
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- udp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin and WLM domain-containing metalloprotease SPCC1442.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.07c","synonyms":[{"name":"Spom972h-udp7","type":"exact"}],"termid":"PR:O94580"}


id: PBO:0086934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication; localizes to the transitional and late Golgi","termid":"PBO:0086934"}


id: MONDO:0018238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare bone disease related to a common gene or pathway defect (obsolete MONDO:0018238)","termid":"MONDO:0018238","xrefs":{"Monarch":{"xref_id":"0018238"}}}


id: PBO:0064050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 84","termid":"PBO:0064050"}


id: GO:0004707
data:
  {"annotated_genes":["SJAG_02923","SJAG_04551","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63099,65347,74382],"is_not":false,"summary":null,"term":"GO:0004707"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein + ATP = protein phosphate + ADP. This reaction is the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli.","definition_xrefs":["ISBN:0198547684","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02923":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016301","GO:0140096","GO:0016740","GO:0004672","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"MAP kinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9626832","Reactome:R-HSA-111898","Reactome:R-HSA-198733","Reactome:R-HSA-5654566","KEGG_REACTION:R00162","MetaCyc:2.7.11.24-RXN","Reactome:R-HSA-5654560","Reactome:R-HSA-73722","Reactome:R-HSA-5654565","Reactome:R-HSA-5654562","GO:0008339","GO:0008338","Reactome:R-HSA-9825759","GO:0016908","GO:0016909","EC:2.7.11.24","Reactome:R-HSA-445079"],"synonyms":[{"name":"ATP:protein phosphotransferase (MAPKK-activated) activity","type":"related"},{"name":"ERK","type":"related"},{"name":"ERK1","type":"exact"},{"name":"ERK2","type":"related"},{"name":"MAP kinase 1 activity","type":"narrow"},{"name":"MAP kinase 2 activity","type":"narrow"},{"name":"MAPK","type":"related"},{"name":"MBP kinase I activity","type":"narrow"},{"name":"MBP kinase II activity","type":"narrow"},{"name":"SAP kinase activity","type":"narrow"},{"name":"SAPK","type":"narrow"},{"name":"extracellular signal-regulated kinase activity","type":"narrow"},{"name":"mitogen activated kinase activity","type":"exact"},{"name":"mitogen-activated protein kinase activity","type":"related"},{"name":"myelin basic protein kinase activity","type":"narrow"},{"name":"stress-activated kinase activity","type":"narrow"},{"name":"stress-activated protein kinase activity","type":"narrow"}],"termid":"GO:0004707","terms_by_termid":{"GO:0004707":null}}


id: GO:0099529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Neurotransmitter receptor activity occurring in the postsynaptic membrane that is involved in regulating postsynaptic membrane potential, either directly (ionotropic receptors) or indirectly (e.g. via GPCR activation of an ion channel).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic neurotransmitter receptor activity","termid":"GO:0098960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099529"}


id: GO:0002415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting polymeric IgA and polymeric IgM immunoglobulin, via transcytosis mediated by the polymeric immunoglobulin receptor (pIgR), from the basolateral surface to apical surface of an epithelial cell. At the apical surface the immunoglobulin binding portion of the pIgRis cleaved and remains bound to the transported immunoglobulin as secretory component (SC). The same process is used for the transport and excretion of IgA immune complexes to the luminal surface of the mucosa.","definition_xrefs":["ISBN:0781735149","PMID:16048543","ISBN:081533642X","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin transcytosis in epithelial cells","termid":"GO:0002414"},{"relation_name":"part_of","term_name":"mucosal immune response","termid":"GO:0002385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor","synonyms":[{"name":"antibody transcytosis mediated by pIgR","type":"exact"},{"name":"immunoglobulin transcytosis mediated by pIgR","type":"exact"}],"termid":"GO:0002415"}


id: PBO:0081281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 56, pseudogene","termid":"PBO:0081281"}


id: MONDO:0022496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by severe intrauterine growth retardation, psychomotor delay and recurrent infections, craniofacial dysostosis, a progeroid appearance, arthrogryposis and camptodactylia.","definition_xrefs":["PMID:196478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis IUGR thoracic dystrophy","synonyms":[{"name":"Van Bervliet syndrome","type":"related"}],"termid":"MONDO:0022496","xrefs":{"Monarch":{"xref_id":"0022496"}}}


id: PBO:0069912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1204, pseudogene","termid":"PBO:0069912"}


id: PBO:0091863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog Cbh2, domesticated transposable element","termid":"PBO:0091863"}


id: PBO:0002078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxoadipate and 2-oxoglutarate transporter (predicted)","termid":"PBO:0002078"}


id: PBO:0042515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing p53 target 1","termid":"PBO:0042515"}


id: FYPO:0008098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the oscillations of homologous chromosomes which occurs at meiotic metaphase I is reduced.","definition_xrefs":["PMID:33529549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal chromosome oscillation at meiotic metaphase I","synonyms":[{"name":"aberrant chromosome oscillation at meiotic metaphase I","type":"exact"}],"termid":"FYPO:0008098"}


id: PBO:0055093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2511","termid":"PBO:0055093"}


id: MONDO:0014821
data:
  {"annotated_genes":["SJAG_00893"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85628],"is_not":false,"summary":null,"term":"MONDO:0014821"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00893":null},"genotype_count":0,"is_obsolete":false,"name":"complex lethal osteochondrodysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:457378","UMLS:C4225162","OMIM:616897","MEDGEN:900688","GARD:17807"],"synonyms":[{"name":"Complex lethal osteochondrodysplasia, Symoens-Barnes-Gistelinck type","type":"exact"},{"name":"OCLSBG","type":"related"},{"name":"osteochondrodysplasia, COMPLEX lethal, Symoens-Barnes-Gistelinck type","type":"related"},{"name":"osteochondrodysplasia, Complex lethal, Symoens-Barnes-Gistelinck type","type":"related"}],"termid":"MONDO:0014821","terms_by_termid":{"MONDO:0014821":null},"xrefs":{"Monarch":{"xref_id":"0014821"}}}


id: PBO:0063512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit 1 pseudogene 1","termid":"PBO:0063512"}


id: GO:0004552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-octanol + NAD+ = 1-octanal + H+ + NADH.","definition_xrefs":["RHEA:24620","EC:1.1.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"octanol dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:OCTANOL-DEHYDROGENASE-RXN","KEGG_REACTION:R02878"],"synonyms":[{"name":"1-octanol dehydrogenase activity","type":"related"},{"name":"octanol dehydrogenase activity","type":"broad"},{"name":"octanol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0004552"}


id: GO:1904386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-phenylalanine derivative stimulus.","definition_xrefs":["PMID:12112407","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-phenylalanine derivative","termid":"GO:1904386"}


id: PBO:0055006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2421","termid":"PBO:0055006"}


id: PBO:0089270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane i-AAA protease complex subunit Yme1","termid":"PBO:0089270"}


id: PBO:0056618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MECOM antisense RNA 1","termid":"PBO:0056618"}


id: GO:0031739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cholecystokinin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"cholecystokinin receptor binding","synonyms":[{"name":"cholecystokinin receptor ligand","type":"narrow"}],"termid":"GO:0031739"}


id: PBO:0052288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kell metallo-endopeptidase (Kell blood group)","termid":"PBO:0052288"}


id: SO:0001284
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2-thiocytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_thiocytidine","secondary_identifiers":["RNAMOD:023"],"synonyms":[{"name":"2-thiocytidine","type":"exact"},{"name":"s2C","type":"exact"},{"name":"two thiocytidine","type":"exact"}],"termid":"SO:0001284"}


id: PBO:0075541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E21","termid":"PBO:0075541"}


id: PBO:0056665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 3","termid":"PBO:0056665"}


id: GO:0043974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 27 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 acetylation (obsolete GO:0043974)","synonyms":[{"name":"histone H3 acetylation at K27","type":"exact"},{"name":"histone H3K27 acetylation","type":"exact"}],"termid":"GO:0043974"}


id: PR:G2TRR7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13G1.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G1.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.16","synonyms":[{"name":"Spom972h-SPBC13G1.16","type":"exact"}],"termid":"PR:G2TRR7"}


id: GO:1902978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication termination involved in meiotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication termination","termid":"GO:1902317"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"premeiotic DNA replication termination","synonyms":[{"name":"DNA replication termination involved in meiotic DNA replication","type":"exact"},{"name":"DNA replication termination involved in meiotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902978"}


id: PBO:0064214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C beta 1","termid":"PBO:0064214"}


id: PBO:0049670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 2","termid":"PBO:0049670"}


id: MONDO:0011468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary motor and sensory neuropathy, Okinawa type is a rare, genetic, axonal hereditary motor and sensory neuropathy characterized by the adult-onset of slowly progressive, symmetric, proximal dominant muscle weakness and atrophy, painful muscle cramps, fasciculations and distal sensory impairment, mostly (but not exclusively) in individuals (and their descendents) from the Okinawa region in Japan. Absent deep tendon reflexes, elevated creatine kinase levels and autosomal dominant inheritance are also characteristic.","definition_xrefs":["Orphanet:90117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary motor and sensory neuropathy, Okinawa type","secondary_identifiers":["OMIM:604484","UMLS:C1858338","MESH:C535717","MEDGEN:346886","GARD:10131"],"synonyms":[{"name":"HMSNO","type":"related"},{"name":"HMSNP","type":"exact"},{"name":"hereditary motor and sensory neuropathy, proximal type","type":"exact"},{"name":"hereditary motor and sensory neuropathy, proximal type, formerly","type":"related"},{"name":"neuropathy, hereditary motor and sensory, Okinawa type","type":"related"}],"termid":"MONDO:0011468","xrefs":{"Monarch":{"xref_id":"0011468"}}}


id: GO:0060444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the mammary gland duct is generated and organized. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching morphogenesis of an epithelial tube","termid":"GO:0048754"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in mammary gland duct morphogenesis","synonyms":[{"name":"mammary gland branching morphogenesis","type":"exact"}],"termid":"GO:0060444"}


id: MONDO:0005331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrocephalosyndactylia (obsolete MONDO:0005331)","termid":"MONDO:0005331","xrefs":{"Monarch":{"xref_id":"0005331"}}}


id: PBO:0075322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 2","termid":"PBO:0075322"}


id: MONDO:0957115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic ryanodine receptor defect","secondary_identifiers":["Orphanet:98742","GARD:19567","UMLS:C5681684","MEDGEN:1842742"],"termid":"MONDO:0957115","xrefs":{"Monarch":{"xref_id":"0957115"}}}


id: GO:0140887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled breakdown of nucleosomes, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.","definition_xrefs":["PMID:35308047","PMID:34471130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"positive regulation of chromatin organization","termid":"GO:1905269"},{"relation_name":"positively_regulates","term_name":"nucleosome assembly","termid":"GO:0006334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003","GO:0006325"],"is_obsolete":false,"name":"positive regulation of nucleosome disassembly","termid":"GO:0140887"}


id: PBO:0075127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRK antisense RNA 1","termid":"PBO:0075127"}


id: GO:0050953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of light stimulus","termid":"GO:0050953"}


id: PBO:0070448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 5","termid":"PBO:0070448"}


id: PBO:0052436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLC2 antisense RNA 1","termid":"PBO:0052436"}


id: PBO:0080763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked inhibitor of apoptosis pseudogene 2","termid":"PBO:0080763"}


id: FYPO:0000265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to DNA damage","synonyms":[{"name":"decreased growth during cellular response to DNA damage","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to DNA damage","type":"exact"},{"name":"hypersensitive to DNA damage","type":"exact"},{"name":"sensitive to DNA damage during mitotic cell cycle","type":"related"},{"name":"sensitive to DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0000265"}


id: GO:0033274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B2 stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B2","synonyms":[{"name":"response to riboflavin","type":"exact"}],"termid":"GO:0033274"}


id: PBO:0013827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin pho85 family Psl1 (predicted)","termid":"PBO:0013827"}


id: PBO:0055371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2800","termid":"PBO:0055371"}


id: PBO:0071267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L24","termid":"PBO:0071267"}


id: GO:0006060
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving sorbitol (D-glucitol), one of the ten stereoisomeric hexitols. It can be derived from glucose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"sorbitol metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:P461-PWY"],"synonyms":[{"name":"sorbitol metabolism","type":"exact"}],"termid":"GO:0006060","terms_by_termid":{"GO:0006062":null}}


id: PBO:0108623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme E2 Hus5/Ubc9","termid":"PBO:0108623"}


id: PBO:0070632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 3","termid":"PBO:0070632"}


id: GO:1903945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hepatocyte apoptotic process.","definition_xrefs":["PMID:8649852","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hepatocyte apoptotic process","termid":"GO:1903943"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"positively_regulates","term_name":"hepatocyte apoptotic process","termid":"GO:0097284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatocyte apoptotic process","synonyms":[{"name":"activation of hepatocyte apoptosis","type":"narrow"},{"name":"activation of hepatocyte apoptotic process","type":"narrow"},{"name":"positive regulation of hepatocyte apoptosis","type":"narrow"},{"name":"up regulation of hepatocyte apoptosis","type":"narrow"},{"name":"up regulation of hepatocyte apoptotic process","type":"exact"},{"name":"up-regulation of hepatocyte apoptosis","type":"narrow"},{"name":"up-regulation of hepatocyte apoptotic process","type":"exact"},{"name":"upregulation of hepatocyte apoptosis","type":"narrow"},{"name":"upregulation of hepatocyte apoptotic process","type":"exact"}],"termid":"GO:1903945"}


id: GO:0033386
data:
  {"annotated_genes":["SJAG_03352","SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99400,109276],"is_not":false,"summary":null,"term":"GO:0033386"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of geranylgeranyl diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"geranylgeranyl diphosphate metabolic process","termid":"GO:0033385"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"geranylgeranyl diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"geranylgeranyl diphosphate anabolism","type":"exact"},{"name":"geranylgeranyl diphosphate biosynthesis","type":"exact"},{"name":"geranylgeranyl diphosphate formation","type":"exact"},{"name":"geranylgeranyl diphosphate synthesis","type":"exact"}],"termid":"GO:0033386","terms_by_termid":{"GO:0033386":null}}


id: GO:0051964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nervous system development","termid":"GO:0051961"},{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"is_a","term_name":"negative regulation of cell junction assembly","termid":"GO:1901889"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of synapse assembly","synonyms":[{"name":"down regulation of synapse assembly","type":"exact"},{"name":"down-regulation of synapse assembly","type":"exact"},{"name":"downregulation of synapse assembly","type":"exact"},{"name":"inhibition of synapse assembly","type":"narrow"},{"name":"negative regulation of synapse biogenesis","type":"exact"},{"name":"negative regulation of synaptogenesis","type":"exact"}],"termid":"GO:0051964"}


id: GO:0019068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A late phase of the viral life cycle during which all the components necessary for the formation of a mature virion collect at a particular site in the cell and the basic structure of the virus particle is formed.","definition_xrefs":["ISBN:0121585336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virion assembly","secondary_identifiers":["Reactome:R-HSA-168302","Reactome:R-HSA-175474","Reactome:R-HSA-168316","GO:0042963"],"synonyms":[{"name":"bacteriophage assembly","type":"narrow"},{"name":"phage assembly","type":"narrow"},{"name":"viral assembly","type":"exact"},{"name":"viral particle assembly","type":"exact"},{"name":"virion assembly and maintenance","type":"exact"},{"name":"virion organization","type":"exact"},{"name":"virus assembly","type":"exact"},{"name":"virus particle assembly","type":"exact"}],"termid":"GO:0019068"}


id: PBO:0088632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc4","termid":"PBO:0088632"}


id: PBO:0042892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, FRL-1, cryptic family 1","termid":"PBO:0042892"}


id: GO:1905464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA duplex unwinding.","definition_xrefs":["PMID:26503245","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA duplex unwinding (obsolete GO:1905464)","synonyms":[{"name":"activation of DNA duplex unwinding","type":"narrow"},{"name":"activation of DNA unwinding","type":"narrow"},{"name":"activation of duplex DNA melting","type":"narrow"},{"name":"positive regulation of DNA unwinding","type":"exact"},{"name":"positive regulation of duplex DNA melting","type":"exact"},{"name":"up regulation of DNA duplex unwinding","type":"exact"},{"name":"up regulation of DNA unwinding","type":"exact"},{"name":"up regulation of duplex DNA melting","type":"exact"},{"name":"up-regulation of DNA duplex unwinding","type":"exact"},{"name":"up-regulation of DNA unwinding","type":"exact"},{"name":"up-regulation of duplex DNA melting","type":"exact"},{"name":"upregulation of DNA duplex unwinding","type":"exact"},{"name":"upregulation of DNA unwinding","type":"exact"},{"name":"upregulation of duplex DNA melting","type":"exact"}],"termid":"GO:1905464"}


id: GO:0018751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,5-dichlorophenylcarboximide + OH- = (3,5-dichlorophenylurea)acetate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,5-dichlorophenylcarboximide hydrolase activity (obsolete GO:0018751)","termid":"GO:0018751"}


id: PBO:0048638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 8","termid":"PBO:0048638"}


id: PBO:0043537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 5","termid":"PBO:0043537"}


id: PBO:0013815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige protein homolog Lvs1 (predicted)","termid":"PBO:0013815"}


id: FYPO:0006616
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119186,119187],"is_not":false,"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable and has a diameter greater than normal. Cell volume may or may not be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased cell diameter","termid":"FYPO:0006615"},{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"increased cell diameter","termid":"FYPO:0006615"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"viable vegetative cell with increased cell diameter","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04522","SJAG_00028"],"single_locus_genotype_uniquenames":["rga4delta","rga6delta"],"synonyms":[{"name":"viable cell with increased cell diameter during vegetative growth","type":"exact"},{"name":"viable vegetative cell with increased cell diameter during mitotic cell cycle","type":"related"},{"name":"viable vegetative cell with increased cell thickness","type":"exact"},{"name":"viable vegetative cell with increased cell width","type":"exact"}],"termid":"FYPO:0006616","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0006616":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0005794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the herpesviridae.","definition_xrefs":["MESH:D006566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Herpesviridae infectious disease","secondary_identifiers":["SCTID:23513009","EFO:0007309"],"synonyms":[{"name":"Herpesviridae caused disease or disorder","type":"exact"},{"name":"Herpesviridae disease or disorder","type":"exact"},{"name":"Herpesviridae infection","type":"related"},{"name":"Herpesviridae infections","type":"exact"},{"name":"Herpesvirus infection","type":"related"},{"name":"Herpesvirus infections","type":"related"},{"name":"herpes infection","type":"related"},{"name":"herpesvirus infection","type":"exact"},{"name":"infection, Herpesviridae","type":"related"},{"name":"infection, Herpesvirus","type":"related"},{"name":"infections, Herpesviridae","type":"related"},{"name":"infections, Herpesvirus","type":"related"}],"termid":"MONDO:0005794","xrefs":{"Monarch":{"xref_id":"0005794"}}}


id: GO:0031288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the sorocarp is generated and organized. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:kp","GOC:mtg_sensu","PMID:4332228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"sorocarp development","termid":"GO:0030587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp morphogenesis","synonyms":[{"name":"fruiting body morphogenesis","type":"broad"}],"termid":"GO:0031288"}


id: MONDO:0003076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinoblastoma that only involves a single eye.","definition_xrefs":["NCIT:C8714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"unilateral retinoblastoma","secondary_identifiers":["MEDGEN:208929","UMLS:C0854915","DOID:4651"],"termid":"MONDO:0003076","xrefs":{"Monarch":{"xref_id":"0003076"}}}


id: PR:Q9UUN5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prenylated Rab acceptor protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19317:SF0","OMA:SCHPO04300","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRA1-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.02c","secondary_identifiers":["UniProtKB:Q9UUN5"],"synonyms":[{"name":"Spom972h-RABAC1","type":"exact"}],"termid":"PR:Q9UUN5"}


id: GO:0052747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: sinapaldehyde + NADPH + H+ = sinapyl-alcohol + NADP+.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sinapyl alcohol dehydrogenase activity (obsolete GO:0052747)","synonyms":[{"name":"sinapyl-alcohol dehydrogenase activity","type":"related"},{"name":"sinapyl-alcohol:NADP+ oxidoreductase activity","type":"exact"}],"termid":"GO:0052747"}


id: PBO:0058255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4633","termid":"PBO:0058255"}


id: PBO:0112955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnacentral_2d_structure_id","termid":"PBO:0112955"}


id: PBO:0066514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X associated protein","termid":"PBO:0066514"}


id: PR:Q9P6K0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1527.03 gene.","definition_xrefs":["UniProtKB:Q9P6K0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized HTH La-type RNA-binding protein C1527.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1527.03","synonyms":[{"name":"Spom972h-SPAC1527.03","type":"exact"}],"termid":"PR:Q9P6K0"}


id: GO:0090082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency or extent of canonical Wnt signaling pathway that positively regulates heart induction. Canonical Wnt signaling pathway involved in heart induction is the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:mtg_heart","PMID:16860783"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway (obsolete GO:0090082)","synonyms":[{"name":"positive regulation of heart induction by negative regulation of canonical Wnt receptor signaling pathway","type":"exact"},{"name":"positive regulation of heart induction by negative regulation of canonical Wnt receptor signalling pathway","type":"exact"},{"name":"positive regulation of heart induction by negative regulation of canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0090082"}


id: GO:0032164
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A faint structure formed of septins found at the leading edge of growth in hyphae of fungal cells growing filamentously. This cap of septins colocalizes with a region of the plasma membrane that is rich in ergosterol.","definition_xrefs":["PMID:16151244","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cap","termid":"GO:0032159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyphal septin cap","termid":"GO:0032164"}


id: MONDO:0004871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhoid","termid":"MONDO:0004872"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perianal hematoma","secondary_identifiers":["DOID:9745","UMLS:C0155784","ICD9:455.4","MEDGEN:510079","SCTID:26373009"],"synonyms":[{"name":"Thrombosed external haemorrhoids","type":"exact"},{"name":"Thrombosed external hemorrhoids","type":"exact"},{"name":"external thrombosed haemorrhoids","type":"exact"},{"name":"external thrombosed hemorrhoids","type":"exact"}],"termid":"MONDO:0004871","xrefs":{"Monarch":{"xref_id":"0004871"}}}


id: GO:0039717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic viral factory which is a 50-400nm diameter membrane invagination. Spherules can appear on several enveloped cellular components depending on the virus.","definition_xrefs":["VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic viral factory","termid":"GO:0039714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spherule viral factory","secondary_identifiers":["Wikipedia:Viroplasm"],"termid":"GO:0039717"}


id: RO:0002448
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between molecular entities A and B where A can physically interact with B and in doing so regulates a process that B is capable of.  For example, A and B may be gene products and binding of B by A regulates the kinase activity of B.","direct_ancestors":[{"relation_name":"is_a","term_name":"molecularly_interacts_with","termid":"RO:0002436"},{"relation_name":"is_a","term_name":"causally_influences","termid":"RO:0002566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activity_directly_regulates_activity_of","synonyms":[{"name":"molecularly controls","type":"exact"}],"termid":"RO:0002448"}


id: PBO:0057704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1291","termid":"PBO:0057704"}


id: PBO:0074981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-23","termid":"PBO:0074981"}


id: MONDO:0012271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesoaxial synostotic syndactyly (MSSD) with phalangeal reduction is a novel and distinct form of non-syndromic syndactyly including complete syndactyly of the 3rd and 4th fingers with synostoses of the corresponding metacarpals and associated single phalanges, syndactyly of the 2nd and 3rd toes and 5th finger clinodactyly.","definition_xrefs":["Orphanet:157801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic syndactyly","termid":"MONDO:0019530"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoaxial synostotic syndactyly with phalangeal reduction","secondary_identifiers":["SCTID:724170007","OMIM:609432","MEDGEN:324459","MESH:C563721","UMLS:C1836206","GARD:10590"],"synonyms":[{"name":"MSSD","type":"exact"},{"name":"syndactyly Malik-Percin type","type":"related"},{"name":"syndactyly mesoaxial synostotic with phalangeal reduction","type":"related"},{"name":"syndactyly type 9","type":"exact"},{"name":"syndactyly, Malik-Percin type","type":"exact"},{"name":"syndactyly, mesoaxial synostotic, with phalangeal reduction","type":"related"},{"name":"syndactyly, type 9","type":"related"}],"termid":"MONDO:0012271","xrefs":{"Monarch":{"xref_id":"0012271"}}}


id: PBO:0058088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4305","termid":"PBO:0058088"}


id: MONDO:0019733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial visceral amyloidosis","termid":"MONDO:0007099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"AFib amyloidosis","secondary_identifiers":["GARD:19226","icd11.foundation:141110588","Orphanet:93562","MEDGEN:1826152","UMLS:C5680267"],"synonyms":[{"name":"familial amyloid nephropathy due to fibrinogen A alpha-chain variant","type":"exact"},{"name":"fibrinogen A alpha-chain amyloidosis","type":"exact"},{"name":"hereditary amyloid nephropathy due to fibrinogen A alpha-chain variant","type":"exact"},{"name":"hereditary renal amyloidosis due to fibrinogen A alpha-chain variant","type":"exact"}],"termid":"MONDO:0019733","xrefs":{"Monarch":{"xref_id":"0019733"}}}


id: PBO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleocytoplasmic shuttling protein","termid":"PBO:0000205"}


id: PBO:0026652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_zinc_ion","termid":"PBO:0026652"}


id: PR:O14190
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00502","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine transferase subunit alg13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.02c","secondary_identifiers":["UniProtKB:O14190"],"synonyms":[{"name":"Spom972h-ALG13","type":"exact"},{"name":"asparagine-linked glycosylation protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14190"}


id: FYPO:0001656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of asparagine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal asparagine import","synonyms":[{"name":"abnormal L-asparagine import","type":"exact"},{"name":"abnormal L-asparagine import across plasma membrane","type":"exact"},{"name":"abnormal asparagine import during mitotic cell cycle","type":"related"},{"name":"abnormal asparagine import during vegetative growth","type":"exact"},{"name":"abnormal asparagine import into cell","type":"exact"},{"name":"abnormal asparagine uptake","type":"exact"}],"termid":"FYPO:0001656"}


id: GO:0097221
data:
  {"annotated_genes":["SJAG_02218","SJAG_04813","SJAG_03143"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104236,105911,110514],"is_not":false,"summary":null,"term":"GO:0097221"}]},"cv_name":"cellular_component","definition":"A protein complex that contains a MADS-box protein and two forkhead domain proteins, and binds to and regulates transcription from promoters of genes transcribed during the M/G1 transition of the cell cycle. In Schizosaccharomyces pombe, the complex contains the MADS-box protein Mbx1 and two forkhead proteins, Sep1 and Fkh2.","definition_xrefs":["PMID:18057023","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02218":null,"SJAG_03143":null,"SJAG_04813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"M/G1 phase-specific MADS box-forkhead transcription factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PBF complex","type":"narrow"},{"name":"PBF transcription complex","type":"narrow"},{"name":"PCB binding factor complex","type":"narrow"},{"name":"pombe cell cycle box binding factor complex","type":"narrow"}],"termid":"GO:0097221","terms_by_termid":{"GO:0097221":null}}


id: MONDO:0015147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other syndrome with lissencephaly as a major feature (obsolete MONDO:0015147)","secondary_identifiers":["icd11.foundation:805385297","Orphanet:102010"],"termid":"MONDO:0015147","xrefs":{"Monarch":{"xref_id":"0015147"}}}


id: GO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the kinin cascade.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinin cascade","termid":"GO:0002256"},{"relation_name":"is_a","term_name":"positive regulation of acute inflammatory response","termid":"GO:0002675"},{"relation_name":"is_a","term_name":"positive regulation of protein activation cascade","termid":"GO:2000259"},{"relation_name":"positively_regulates","term_name":"kinin cascade","termid":"GO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"positive regulation of kinin cascade","synonyms":[{"name":"activation of kinin cascade","type":"narrow"},{"name":"stimulation of kinin cascade","type":"narrow"},{"name":"up regulation of kinin cascade","type":"exact"},{"name":"up-regulation of kinin cascade","type":"exact"},{"name":"upregulation of kinin cascade","type":"exact"}],"termid":"GO:0002258"}


id: PBO:0076957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta induced","termid":"PBO:0076957"}


id: PBO:0089405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational activator, zf-CCHC type zinc finger protein","termid":"PBO:0089405"}


id: GO:0098856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which lipids are taken up from the contents of the intestine.","definition_xrefs":["GOC:sl","GOC:dos","PMID:18768481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal lipid absorption","secondary_identifiers":["Reactome:R-HSA-8963678"],"termid":"GO:0098856"}


id: PBO:0034618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiosis_II_metaphase/anaphase_transition_delay","termid":"PBO:0034618"}


id: PBO:0050487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXB cluster antisense RNA 2","termid":"PBO:0050487"}


id: FYPO:0004277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of uracil DNA N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA N-glycosylase activity","termid":"FYPO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal uracil DNA N-glycosylase activity","termid":"FYPO:0004277"}


id: FYPO:0002305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to non-ionic osmotic stress is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to osmotic stress","termid":"FYPO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to non-ionic osmotic stress","synonyms":[{"name":"decreased RNA level during cellular response to non-ionic osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to non-ionic osmotic stress during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to non-ionic osmotic stress","type":"narrow"},{"name":"decreased transcript level during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"reduced RNA level during cellular response to non-ionic osmotic stress","type":"exact"}],"termid":"FYPO:0002305"}


id: PBO:0067740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 39","termid":"PBO:0067740"}


id: GO:0034745
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the tumor suppressor protein adenomatous polyposis coli (APC), the small GTPase Rac1, and the Rac1 and Cdc42 effector IQGAP1; may play a role in cytoskeleton organization and cell migration.","definition_xrefs":["PMID:15572129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"APC-IQGAP1-Rac1 complex","termid":"GO:0034745"}


id: PBO:0047937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(13)(q13.2)","termid":"PBO:0047937"}


id: PBO:0011457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc2","termid":"PBO:0011457"}


id: GO:0009314
data:
  {"annotated_genes":["SJAG_04150","SJAG_02818","SJAG_00863","SJAG_04190","SJAG_01648","SJAG_02199","SJAG_04877","SJAG_00208","SJAG_02200","SJAG_00814","SJAG_03898","SJAG_02860","SJAG_00272","SJAG_04791","SJAG_01262","SJAG_01010","SJAG_00729","SJAG_02334","SJAG_05242","SJAG_02182","SJAG_02828","SJAG_05197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77773],"is_not":false,"summary":null,"term":"GO:0009314"},{"annotations":[65961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[119173,119174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[76749,102620,95028,108902],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[112621,96921,65572,75513,93463,68495,105745,67363,69901,60141,87801,64624,104023,95809,66228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.","definition_xrefs":["Wikipedia:Electromagnetic_radiation","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to radiation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:23873862":null},"synonyms":[{"name":"response to electromagnetic radiation stimulus","type":"exact"},{"name":"response to radiation stimulus","type":"exact"}],"termid":"GO:0009314","terms_by_termid":{"GO:0009314":null,"GO:0009785":null,"GO:0070914":null,"GO:0071483":null,"GO:1904161":null}}


id: MONDO:0018053
data:
  {"annotated_genes":["SJAG_01797","SJAG_00995","SJAG_01207","SJAG_01235","SJAG_03206","SJAG_03112","SJAG_00159","SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011125"},{"annotations":[85093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014615"},{"annotations":[85094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014619"},{"annotations":[85107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010495"},{"annotations":[85425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014841"},{"annotations":[86776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032806"},{"annotations":[85899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030517"},{"annotations":[85904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030518"}]},"cv_name":"mondo","definition":"Trichothiodystrophy or TTD is a heterogeneous group disorders characterized by short, brittle hair with low-sulphur content (due to an abnormal synthesis of the sulfur containing keratins).","definition_xrefs":["Orphanet:33364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00159":null,"SJAG_00995":null,"SJAG_01159":null,"SJAG_01207":null,"SJAG_01235":null,"SJAG_01797":null,"SJAG_03112":null,"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:723551003","NCIT:C4924","MEDGEN:363064","UMLS:C1955934","NANDO:1200627","MedDRA:10044628","OMIMPS:601675","icd11.foundation:1366758649","NORD:1292","DOID:0111866","GARD:12109"],"synonyms":[{"name":"trichothiodystrophy syndrome","type":"exact"}],"termid":"MONDO:0018053","terms_by_termid":{"MONDO:0010495":null,"MONDO:0011125":null,"MONDO:0014615":null,"MONDO:0014619":null,"MONDO:0014841":null,"MONDO:0030517":null,"MONDO:0030518":null,"MONDO:0032806":null},"xrefs":{"Monarch":{"xref_id":"0018053"}}}


id: PBO:0077278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 17","termid":"PBO:0077278"}


id: PBO:0061600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUBP iron-sulfur cluster assembly factor 1, cytosolic","termid":"PBO:0061600"}


id: PBO:0085936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; SWAT-GFP fusion protein localizes to the endoplasmic reticulum","termid":"PBO:0085936"}


id: GO:0070282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyridoxine, 4,5-bis(hydroxymethyl)-2-methylpyridin-3-ol, a form of vitamin B6.","definition_xrefs":["CHEBI:16709","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyridoxine binding","termid":"GO:0070282"}


id: MONDO:0015141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease that involves the medulla oblongata.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete disorder of medulla oblongata (obsolete MONDO:0015141)","secondary_identifiers":["Orphanet:102000"],"synonyms":[{"name":"disease of medulla oblongata","type":"exact"},{"name":"disease or disorder of medulla oblongata","type":"exact"},{"name":"disorder of medulla oblongata","type":"exact"},{"name":"medulla oblongata disease","type":"exact"},{"name":"medulla oblongata disease or disorder","type":"exact"},{"name":"medullar disease","type":"related"}],"termid":"MONDO:0015141","xrefs":{"Monarch":{"xref_id":"0015141"}}}


id: PBO:0067278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 357, pseudogene","termid":"PBO:0067278"}


id: PBO:0062672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily Z member 3 pseudogene","termid":"PBO:0062672"}


id: GO:0002536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases following a stimulus as part of an inflammatory response; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals, resulting in an increase in their intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"},{"relation_name":"is_a","term_name":"respiratory burst involved in defense response","termid":"GO:0002679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst involved in inflammatory response","synonyms":[{"name":"oxidative burst during acute inflammatory response","type":"broad"},{"name":"production of reactive oxygen species during acute inflammatory response","type":"broad"},{"name":"respiratory burst involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002536"}


id: PBO:0068798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 35, pseudogene","termid":"PBO:0068798"}


id: PBO:0011481
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defect of the gene silencing at centromeric heterochromatin","termid":"PBO:0011481"}


id: FYPO:0002391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at ribosomal DNA repeat regions is decreased.","definition_xrefs":["PMID:24945319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at ncRNA genes","termid":"FYPO:0004346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin at rDNA","secondary_identifiers":["FYPO:0006350"],"synonyms":[{"name":"decreased protein localisation to chromatin at rDNA","type":"exact"},{"name":"decreased protein localization to chromatin at rDNA during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at rDNA during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at rRNA genes","type":"exact"},{"name":"decreased protein localization to chromatin at ribosomal DNA","type":"exact"},{"name":"decreased protein localization to rDNA","type":"exact"},{"name":"reduced protein localization to chromatin at rDNA","type":"exact"}],"termid":"FYPO:0002391"}


id: GO:1901596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reversine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to reversine","termid":"GO:1901596"}


id: GO:0034838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (-)-(2S,5R)-menthone + NAD+ = (5R)-menth-2-enone + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete menthone dehydrogenase activity (obsolete GO:0034838)","termid":"GO:0034838"}


id: PBO:0067872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 174","termid":"PBO:0067872"}


id: GO:0072187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a metanephric cap from unspecified parts. The metanephric cap is formed by the condensation of metanephric mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"metanephric cap morphogenesis","termid":"GO:0072186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap formation","termid":"GO:0072187"}


id: PBO:0075308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5","termid":"PBO:0075308"}


id: PBO:0060425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGFI-A binding protein 1","termid":"PBO:0060425"}


id: GO:0009713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound biosynthetic process","synonyms":[{"name":"catechol anabolism","type":"related"},{"name":"catechol biosynthesis","type":"related"},{"name":"catechol biosynthetic process","type":"related"},{"name":"catechol formation","type":"related"},{"name":"catechol synthesis","type":"related"}],"termid":"GO:0009713"}


id: PBO:0083564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF AAC1","termid":"PBO:0083564"}


id: PBO:0040414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit b","termid":"PBO:0040414"}


id: GO:0071971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an extracellular vesicular exosome, a membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Exosomes are defined by their size, which generally ranges from 30 nm to 100 nm.","definition_xrefs":["GOC:mah","PMID:27462458","PMID:19442504","GOC:tfm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"extracellular exosome biogenesis","termid":"GO:0097734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"extracellular exosome assembly","synonyms":[{"name":"extracellular vesicular exosome assembly","type":"exact"}],"termid":"GO:0071971"}


id: MONDO:0014013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ariboflavinosis","termid":"MONDO:0004573"},{"relation_name":"is_a","term_name":"disorder of metabolite absorption and transport","termid":"MONDO:0017757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"maternal riboflavin deficiency","secondary_identifiers":["Orphanet:411712","MEDGEN:1657395","GARD:17686","UMLS:C4750953"],"synonyms":[{"name":"RBFVD","type":"broad"},{"name":"maternal riboflavin deficiency","type":"exact"},{"name":"riboflavin deficiency","type":"broad"}],"termid":"MONDO:0014013","xrefs":{"Monarch":{"xref_id":"0014013"}}}


id: PBO:0111738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 19 member 4, pseudogene","termid":"PBO:0111738"}


id: PBO:0070543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 9","termid":"PBO:0070543"}


id: MONDO:0003802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the cornea.","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"cornea neoplasm","termid":"MONDO:0021238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"cornea cancer","secondary_identifiers":["ICD9:190.4","MEDGEN:102282","DOID:6199","SCTID:363464006","NCIT:C3565","UMLS:C0153629"],"synonyms":[{"name":"cancer of cornea","type":"exact"},{"name":"cornea cancer","type":"exact"},{"name":"corneal tumor","type":"broad"},{"name":"corneal tumour","type":"broad"},{"name":"malignant cornea neoplasm","type":"exact"},{"name":"malignant cornea tumor","type":"exact"},{"name":"malignant cornea tumour","type":"exact"},{"name":"malignant corneal neoplasm","type":"exact"},{"name":"malignant corneal tumor","type":"exact"},{"name":"malignant corneal tumour","type":"exact"},{"name":"malignant neoplasm of cornea","type":"exact"},{"name":"malignant neoplasm of cornea (primary)","type":"exact"},{"name":"malignant neoplasm of the cornea","type":"exact"},{"name":"malignant tumor of cornea","type":"exact"},{"name":"malignant tumor of the cornea","type":"exact"},{"name":"malignant tumour of cornea","type":"exact"},{"name":"malignant tumour of the cornea","type":"exact"}],"termid":"MONDO:0003802","xrefs":{"Monarch":{"xref_id":"0003802"}}}


id: PBO:0053470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 434","termid":"PBO:0053470"}


id: PBO:0046075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1","termid":"PBO:0046075"}


id: GO:1990273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which a 2,2,7-trimethylguanosine cap structure is added to the 5' end of an snRNA. The snRNA capping process includes the formation of 7-methyl-G caps found on all RNA polymerase II transcripts, followed by hypermethylation at the 2' position of the guanosine residue to convert a mono-methylated cap to a 2,2,7-trimethylguanosine cap structure. Note that the pol III transcribed U6 snRNA is also TMG capped.","definition_xrefs":["PMID:15590684","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA processing","termid":"GO:0016180"},{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016073","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"snRNA 2,2,7-trimethylguanosine (TMG) capping","synonyms":[{"name":"snRNA 2,2,7-trimethylguanosine (TMG) cap formation","type":"exact"},{"name":"snRNA 5'-end processing","type":"broad"},{"name":"snRNA capping","type":"exact"}],"termid":"GO:1990273"}


id: MONDO:0017989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"His bundle tachycardia is a very rare congenital genetic tachyarrhythmia characterized by incessant tachycardia and high morbidity and mortality.","definition_xrefs":["Orphanet:3283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"His bundle tachycardia","secondary_identifiers":["UMLS:C0039235","GARD:2706","icd11.foundation:962827983","MESH:D013613","ICD9:427.89","NCIT:C111646","SCTID:233901002","MEDGEN:21066"],"synonyms":[{"name":"JET","type":"exact"},{"name":"junctional ectopic tachycardia","type":"exact"}],"termid":"MONDO:0017989","xrefs":{"Monarch":{"xref_id":"0017989"}}}


id: PBO:0082013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger containing ubiquitin peptidase 1","termid":"PBO:0082013"}


id: MONDO:0018886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete listeriosis (obsolete MONDO:0018886)","termid":"MONDO:0018886","xrefs":{"Monarch":{"xref_id":"0018886"}}}


id: PBO:0077756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 20","termid":"PBO:0077756"}


id: FYPO:0006397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubules become detached from the nuclear envelope (NE). Normally, some cytoplasmic microtubules are nucleated at the NE and remain attached.","definition_xrefs":["PomBase:mah","PMID:16481403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"cytoplasmic microtubules detached from nuclear envelope","synonyms":[{"name":"cytoplasmic microtubules detached from nuclear envelope during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubules detached from nuclear envelope during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules dissociated from nuclear envelope","type":"exact"}],"termid":"FYPO:0006397"}


id: MONDO:0005418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Left ventricular non-compaction (LVNC) is characterized by prominent left ventricular trabeculae and deep inter-trabecular recesses. The myocardial wall is often thickened with a thin, compacted epicardial layer and a thickened endocardial layer. In some patients, LVNC is associated with left ventricular dilatation and systolic dysfunction, which can be transient in neonates.","definition_xrefs":["EFO:0004686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"non-compaction cardiomyopathy","secondary_identifiers":["MEDGEN:1843481","UMLS:C4324548"],"termid":"MONDO:0005418","xrefs":{"Monarch":{"xref_id":"0005418"}}}


id: PBO:0003199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Histidine","termid":"PBO:0003199"}


id: GO:0140332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a lipopolysaccharide (LPS) from the outer leaflet of a donor membrane, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to the outer leaflet of an acceptor membrane.","definition_xrefs":["PMID:24639492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0120013","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"lipopolysaccharide transfer activity","synonyms":[{"name":"intermembrane LPS transporter activity","type":"exact"},{"name":"intermembrane lipopolysaccharide transfer activity","type":"exact"},{"name":"intermembrane lipopolysaccharide transporter activity","type":"exact"},{"name":"lipopolysaccharide carrier activity","type":"exact"}],"termid":"GO:0140332"}


id: GO:0030695
data:
  {"annotated_genes":["SJAG_04733","SJAG_02307","SJAG_04910","SJAG_01114","SJAG_03002","SJAG_01319","SJAG_04765","SJAG_02666","SJAG_06588","SJAG_02231","SJAG_01699","SJAG_04837","SJAG_00143","SJAG_01415","SJAG_01184","SJAG_01025","SJAG_02765","SJAG_00864","SJAG_00028","SJAG_02390","SJAG_05210","SJAG_02012","SJAG_02539","SJAG_01386","SJAG_02160","SJAG_02278","SJAG_03268","SJAG_01526","SJAG_00990","SJAG_04391","SJAG_03089","SJAG_05184","SJAG_00289","SJAG_02379","SJAG_03085","SJAG_02277","SJAG_04771","SJAG_01367","SJAG_02471","SJAG_04982","SJAG_04464","SJAG_03600","SJAG_00338","SJAG_01600","SJAG_02520","SJAG_03021","SJAG_04080","SJAG_04462","SJAG_03153","SJAG_01309","SJAG_04203","SJAG_03338","SJAG_00216","SJAG_02486","SJAG_04943","SJAG_03488","SJAG_00801","SJAG_00858","SJAG_00514","SJAG_03678","SJAG_01048","SJAG_03246","SJAG_03705","SJAG_02368","SJAG_04724","SJAG_02831","SJAG_03581","SJAG_03655","SJAG_04653","SJAG_04938","SJAG_04522","SJAG_00467","SJAG_01659","SJAG_00551","SJAG_00824","SJAG_01695","SJAG_00092","SJAG_05346","SJAG_01576","SJAG_03142","SJAG_00807","SJAG_02027","SJAG_02833","SJAG_04491","SJAG_03748","SJAG_01011","SJAG_02529","SJAG_02248","SJAG_00064","SJAG_04400","SJAG_03704","SJAG_02063","SJAG_04013","SJAG_03361","SJAG_02422","SJAG_04010","SJAG_04776","SJAG_04548","SJAG_04283","SJAG_04074","SJAG_00991","SJAG_02493","SJAG_02819","SJAG_01030","SJAG_04615","SJAG_02004","SJAG_04498","SJAG_02645"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70374,75818,90888,106477,115828],"is_not":false,"summary":null,"term":"GO:0030695"},{"annotations":[71699,68216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005092"},{"annotations":[68293,71350,60067,74804,69847,65391,72929,65757,72461,74701,76603,67660,70137,58724,75358,77229,69880,70762,77288,79398,78084,110752,68974,72577,72017,73401,93769,76558,65981,66317,76857,77459,87329,96350,70924,65299,79070,105092,69751,114792,93134,95662,95891,71416,73291,71639,70337,77984,93126,70571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005096"},{"annotations":[116099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005095"},{"annotations":[74510,94117,69065,63233,90991,97107,98911,77284,57030,66386,57725,69650,78393,78732,80212,92570,65158,61132,90798,106797,116294,71669,106214,71728,73719,93843,57429,58093,64518,72209,73989,78031,77999,91914,97522,97769,71186,72025,115326,68247,56954,57542,79192,108108,62075,69355,73696,75210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005085"},{"annotations":[76015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005093"},{"annotations":[110595,75141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005094"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a GTPase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside-triphosphatase regulator 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regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0005083"],"synonyms":[{"name":"small GTPase regulator activity","type":"related"},{"name":"small GTPase regulatory/interacting protein activity","type":"related"}],"termid":"GO:0030695","terms_by_termid":{"GO:0005085":null,"GO:0005092":null,"GO:0005093":null,"GO:0005094":null,"GO:0005095":null,"GO:0005096":null,"GO:0030695":null}}


id: PBO:0002571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex subunit Tpr1","termid":"PBO:0002571"}


id: PR:O13730
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A muskelin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15526:SF5","OMA:SCHPO01545","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei4-dependent protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.10","secondary_identifiers":["UniProtKB:O13730"],"synonyms":[{"name":"Spom972h-MKLN1","type":"exact"}],"termid":"PR:O13730"}


id: GO:1903534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lactose biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:12018418","GOC:mr","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"regulates","term_name":"lactose biosynthetic process","termid":"GO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of lactose biosynthetic process","synonyms":[{"name":"regulation of lactose anabolism","type":"exact"},{"name":"regulation of lactose biosynthesis","type":"exact"},{"name":"regulation of lactose formation","type":"exact"},{"name":"regulation of lactose synthesis","type":"exact"}],"termid":"GO:1903534"}


id: PBO:0079220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tau tubulin kinase 2","termid":"PBO:0079220"}


id: MONDO:0019632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lyme disease (named after the towns in the USA where the disease was first identified) is a bacterial infection caused by Borrelia burgdorferi.","definition_xrefs":["Orphanet:91546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"spirochaetales infections","termid":"MONDO:0021839"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lyme disease","secondary_identifiers":["MESH:D008193","ICD10CM:A69.2","DOID:11729","icd11.foundation:1600014919","MEDGEN:44213","SCTID:48982009","EFO:0008510","MedDRA:10025169","UMLS:C0024198","ICD9:088.81","NCIT:C45161"],"synonyms":[{"name":"Bannwarth syndrome","type":"exact"},{"name":"Bannworth's syndrome","type":"exact"},{"name":"Borrelia","type":"exact"},{"name":"Borrelia burgdorferi infection","type":"exact"},{"name":"Borreliella burgdorferi caused disease or disorder","type":"exact"},{"name":"Borreliella burgdorferi disease or disorder","type":"exact"},{"name":"Borreliella burgdorferi infectious disease","type":"exact"},{"name":"Lyme borreliosis","type":"exact"},{"name":"Lyme disease","type":"exact"},{"name":"Lyme neuroborreliosis","type":"exact"},{"name":"neuroborreliosis","type":"exact"},{"name":"neurological Lyme disease","type":"exact"}],"termid":"MONDO:0019632","xrefs":{"Monarch":{"xref_id":"0019632"}}}


id: MONDO:0011626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromegaloid features, overgrowth, cleft palate, and hernia","secondary_identifiers":["MEDGEN:340050","UMLS:C1853757","OMIM:606049","MESH:C535656"],"synonyms":[{"name":"Aoch","type":"related"},{"name":"acromegaloid features, overgrowth, cleft palate and hernia","type":"related"},{"name":"acromegaloid features, overgrowth, cleft palate, and hernia","type":"exact"}],"termid":"MONDO:0011626","xrefs":{"Monarch":{"xref_id":"0011626"}}}


id: RO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p 'results in commitment to' c if and only if p is a developmental process and c is a cell and p results in the state of c changing such that is can only develop into a single cell type.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_commitment_to","termid":"RO:0002348"}


id: PBO:0085987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for normal growth rate at 15 degrees C; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; mtc4 is synthetically sick with cdc13-1","termid":"PBO:0085987"}


id: FYPO:0003206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal during a cellular response to salt stress. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein-protein interaction during cellular response to salt stress","synonyms":[{"name":"decreased protein binding during cellular response to salt stress","type":"exact"},{"name":"decreased protein-protein interaction during salt stress","type":"exact"},{"name":"decreased protein-protein interaction in response to salt stress","type":"related"},{"name":"reduced protein-protein interaction during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003206"}


id: FYPO:0000316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore germinates but fails to produce dividing cells that can survive under normal conditions.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination","synonyms":[{"name":"inviable germinated spore","type":"exact"},{"name":"inviable germinating spore","type":"related"},{"name":"lethal after spore germination","type":"exact"}],"termid":"FYPO:0000316"}


id: PR:Q10474
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys7 gene.","definition_xrefs":["UniProtKB:Q10474","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.02c","synonyms":[{"name":"AASD-PPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lys7","type":"exact"}],"termid":"PR:Q10474"}


id: PBO:0038344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-co-occurs","termid":"PBO:0038344"}


id: MONDO:0024888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm of the female reproductive system arising from mesonephric remnants.","definition_xrefs":["NCIT:C4295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"mesonephric neoplasm","secondary_identifiers":["ICDO:9110/1","UMLS:C0334531","MEDGEN:137779"],"synonyms":[{"name":"Wolffian duct neoplasm","type":"exact"},{"name":"Wolffian duct tumor","type":"exact"},{"name":"Wolffian duct tumour","type":"exact"},{"name":"mesonephric duct neoplasm","type":"exact"},{"name":"mesonephric duct tumor","type":"exact"},{"name":"mesonephric duct tumour","type":"exact"},{"name":"mesonephric neoplasm","type":"exact"},{"name":"mesonephric tumor","type":"exact"},{"name":"mesonephric tumour","type":"exact"},{"name":"mesonephroma","type":"exact"},{"name":"neoplasm of mesonephric duct","type":"exact"},{"name":"tumor of mesonephric duct","type":"exact"},{"name":"tumour of mesonephric duct","type":"exact"}],"termid":"MONDO:0024888","xrefs":{"Monarch":{"xref_id":"0024888"}}}


id: GO:0075297
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110993],"is_not":false,"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ascospore formation, a process in which a sexual spore, named ascospore, from Ascomycete fungi was produced inside an ascus.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of ascospore formation","termid":"GO:0034307"},{"relation_name":"is_a","term_name":"negative regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043942"},{"relation_name":"negatively_regulates","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0030437"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0030437"],"is_obsolete":false,"name":"negative regulation of ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0075297","terms_by_termid":{"GO:0075297":null}}


id: PBO:0084493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein involved in forming DSBs; involved in double-strand break (DSBs) formation during meiotic recombination; required for chromosome synapsis and production of viable spores","termid":"PBO:0084493"}


id: PBO:0028320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028320"}


id: PBO:0087666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the inner nuclear membrane Asi ubiquitin ligase complex; the Asi complex targets both misfolded proteins of the inner nuclear membrane-associated degradation (INMAD) pathway and regulators of sterol biosynthesis for ubiquitin-mediated degradation; acts with Asi2p and Asi3p to ensure the fidelity of SPS-sensor signaling by targeting latent unprocessed forms of Stp1p and Stp2p, maintaining the repressed state of gene expression in the absence of inducing amino acids","termid":"PBO:0087666"}


id: PBO:0001492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial CHCH domain protein (predicted)","termid":"PBO:0001492"}


id: PBO:0046333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecto-NOX disulfide-thiol exchanger 2","termid":"PBO:0046333"}


id: GO:0008316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the vitelline membrane of an egg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of vitelline membrane","termid":"GO:0008316"}


id: GO:0003937
data:
  {"annotated_genes":["SJAG_04681"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69583],"is_not":false,"summary":null,"term":"GO:0003937"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: IMP + H2O = 5-formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide.","definition_xrefs":["EC:3.5.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclohydrolase activity","termid":"GO:0019238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"IMP cyclohydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:18445","Reactome:R-HSA-73797","MetaCyc:IMPCYCLOHYDROLASE-RXN"],"synonyms":[{"name":"IMP 1,2-hydrolase (decyclizing)","type":"related"},{"name":"IMP synthetase activity","type":"related"},{"name":"inosinate cyclohydrolase activity","type":"related"},{"name":"inosinicase activity","type":"related"}],"termid":"GO:0003937","terms_by_termid":{"GO:0003937":null}}


id: PR:O14187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing-splicing factor 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01110","PANTHER:PTHR11140:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor spp42 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.12c","secondary_identifiers":["UniProtKB:O14187"],"synonyms":[{"name":"Spom972h-PRPF8","type":"exact"},{"name":"complexed with cdc5 protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14187"}


id: MONDO:1011356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sensory ganglionopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ganglionopathy, non-human animal","termid":"MONDO:1011356","xrefs":{"Monarch":{"xref_id":"1011356"}}}


id: GO:0018848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pinocarveol = carveol.","definition_xrefs":["UM-BBD_reactionID:r0715"],"gene_count":0,"genotype_count":0,"name":"obsolete pinocarveol isomerase activity (obsolete GO:0018848)","termid":"GO:0018848"}


id: MONDO:0014058
data:
  {"annotated_genes":["SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84924],"is_not":false,"summary":null,"term":"MONDO:0014058"}]},"cv_name":"mondo","definition":"A rare genetic disease characterized by facial dysmorphism with malar hypoplasia and high forehead, immunodeficiency resulting in recurrent infections, impaired growth (with normal growth hormone production and response) resulting in short stature, and livedo affecting face and extremities. Immunological analyzes show low memory B-cell and naïve T cell counts, decreased T cell proliferation, and reduced IgM, IgG2 and IgG4 titers. Patients do not exhibit increased susceptibility to cancer.","definition_xrefs":["Orphanet:352712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02908":null},"genotype_count":0,"is_obsolete":false,"name":"facial dysmorphism-immunodeficiency-livedo-short stature syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3554576","OMIM:615139","GARD:17528","MEDGEN:767490"],"synonyms":[{"name":"facial dysmorphism, immunodeficiency, livedo, and short stature","type":"related"},{"name":"fils","type":"related"},{"name":"fils syndrome","type":"exact"}],"termid":"MONDO:0014058","terms_by_termid":{"MONDO:0014058":null},"xrefs":{"Monarch":{"xref_id":"0014058"}}}


id: PBO:0088796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone and CENP-A amino terminus domain (NTD) isomerase Ani2","termid":"PBO:0088796"}


id: GO:0015653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycine betaine(out) + H+(out) = glycine betaine(in) + H+(in).","definition_xrefs":["TC:2.A.15.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine transmembrane transporter activity","termid":"GO:0015199"},{"relation_name":"is_a","term_name":"quaternary ammonium group:proton symporter activity","termid":"GO:0015652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glycine betaine:proton symporter activity","synonyms":[{"name":"glycine betaine:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015653"}


id: MONDO:1010477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arrhythmogenic right ventricular cardiomyopathy that occurs in chimpanzee.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arrhythmogenic right ventricular cardiomyopathy, non-human animal","termid":"MONDO:1010019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmogenic right ventricular cardiomyopathy, chimpanzee","secondary_identifiers":["OMIA:000878-9598"],"termid":"MONDO:1010477","xrefs":{"Monarch":{"xref_id":"1010477"}}}


id: GO:0034386
data:
  {"annotated_genes":["SJAG_03434"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56990],"is_not":false,"summary":null,"term":"GO:0034386"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 4-aminobutanoate = L-glutamate + succinate semialdehyde.","definition_xrefs":["RHEA:23352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"4-aminobutyrate:2-oxoglutarate transaminase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:GABATRANSAM-RXN","EC:2.6.1.19"],"synonyms":[{"name":"4-aminobutanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"4-aminobutyrate-2-ketoglutarate aminotransferase activity","type":"related"},{"name":"4-aminobutyrate-2-oxoglutarate aminotransferase activity","type":"related"},{"name":"4-aminobutyrate-2-oxoglutarate transaminase activity","type":"related"},{"name":"4-aminobutyric acid 2-ketoglutaric acid aminotransferase activity","type":"related"},{"name":"GABA-2-oxoglutarate aminotransferase activity","type":"related"},{"name":"GABA-2-oxoglutarate transaminase activity","type":"related"},{"name":"GABA-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"GABA-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"GABA-alpha-ketoglutaric acid transaminase activity","type":"related"},{"name":"GABA-alpha-oxoglutarate aminotransferase activity","type":"related"},{"name":"GABA-oxoglutarate aminotransferase activity","type":"related"},{"name":"GABA-oxoglutarate transaminase activity","type":"related"},{"name":"gamma-aminobutyrate-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"gamma-aminobutyrate-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"gamma-aminobutyrate:alpha-oxoglutarate aminotransferase activity","type":"related"},{"name":"gamma-aminobutyric acid-2-oxoglutarate transaminase activity","type":"related"},{"name":"gamma-aminobutyric acid-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"gamma-aminobutyric acid-alpha-ketoglutaric acid aminotransferase activity","type":"related"}],"termid":"GO:0034386","terms_by_termid":{"GO:0034386":null}}


id: GO:0047380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a medium-chain acyl-CoA = a medium-chain carboxylate + CoA. Requires ADP.","definition_xrefs":["EC:3.1.2.19","MetaCyc:3.1.2.19-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP-dependent medium-chain-acyl-CoA hydrolase activity (obsolete GO:0047380)","synonyms":[{"name":"ADP-dependent medium-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain acyl-CoA hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain acyl-thioester hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain hydrolase activity","type":"related"},{"name":"ADP-dependent myristoyl-CoA thioesterase activity","type":"narrow"},{"name":"ADP-dependent-medium-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0047380"}


id: PBO:0066148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 4","termid":"PBO:0066148"}


id: PBO:0050335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 37","termid":"PBO:0050335"}


id: PBO:0034702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Gup1 (predicted)","termid":"PBO:0034702"}


id: GO:0036319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the mating-type peptide pheromone M-factor and transmitting the signal across the membrane to initiate a change in cell activity. M-factor is a nine-membered oligopeptide that consists of tyrosyl, threonyl, prolyl, lysyl, valyl, prolyl, tyrosyl, methionyl and methyl S-farnesylcysteinate residues joined in sequence, and is a peptide pheromone released by Schizosaccharomyces pombe cells of the cellular mating type Minus.","definition_xrefs":["GOC:al","PMID:7941744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating-type factor pheromone receptor activity","termid":"GO:0004932"},{"relation_name":"is_a","term_name":"peptide pheromone receptor activity","termid":"GO:0036318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"mating-type M-factor pheromone receptor activity","synonyms":[{"name":"M-factor mating pheromone receptor activity","type":"exact"},{"name":"M-factor receptor activity","type":"exact"}],"termid":"GO:0036319"}


id: PBO:0066444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REV1 DNA directed polymerase","termid":"PBO:0066444"}


id: MONDO:0020399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoplasia of the mitral valve annulus is a rare, congenital, mitral valve malformation characterized by hypoplastic annulus which usually appears within a complete mitral valve hypoplasia, causing mitral valve stenosis. Association with other cardiac malformation is common, including coarctation of the aorta, aortic valve stenosis, Shone complex and hypoplastic left heart syndrome.","definition_xrefs":["Orphanet:99058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypoplasia of the mitral valve annulus","secondary_identifiers":["MEDGEN:757607","ICD10CM:Q23.2","ICD9:746.89","SCTID:449270002","GARD:19625","UMLS:C3165203"],"termid":"MONDO:0020399","xrefs":{"Monarch":{"xref_id":"0020399"}}}


id: MONDO:0030354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facioscapulohumeral muscular dystrophy","termid":"MONDO:0001347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005336"],"is_obsolete":false,"name":"facioscapulohumeral muscular dystrophy 3, digenic","secondary_identifiers":["DOID:0060917","UMLS:C5561959","OMIM:619477","MEDGEN:1794169"],"synonyms":[{"name":"FSHD3","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy 3, digenic","type":"exact"}],"termid":"MONDO:0030354","xrefs":{"Monarch":{"xref_id":"0030354"}}}


id: PBO:0030288
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_sulfide_level","termid":"PBO:0030288"}


id: MONDO:0018758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Familial patent arterial duct is a rare, genetic, non-syndromic, congenital anomaly of the great arteries characterized by the presence of an isolated patent arterial duct (PDA) (i.e. failure of closure of ductus arteriosis after birth) in several members of the same family. Clinical presentation is similar to the sporadic form and may range from neonatal-onset tachypnea, diaphoresis and failure to thrive to adult-onset atrial arrhythmia, signs and symptoms of heart failure and cyanosis limited to the lower extremities.","definition_xrefs":["Orphanet:466729"],"gene_count":0,"genotype_count":0,"name":"obsolete familial patent arterial duct (obsolete MONDO:0018758)","termid":"MONDO:0018758","xrefs":{"Monarch":{"xref_id":"0018758"}}}


id: GO:0070665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of leukocyte proliferation","termid":"GO:0070663"},{"relation_name":"positively_regulates","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte proliferation","synonyms":[{"name":"activation of leukocyte proliferation","type":"narrow"},{"name":"stimulation of leukocyte proliferation","type":"narrow"},{"name":"up regulation of leukocyte proliferation","type":"exact"},{"name":"up-regulation of leukocyte proliferation","type":"exact"},{"name":"upregulation of leukocyte proliferation","type":"exact"}],"termid":"GO:0070665"}


id: PBO:0071253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 94","termid":"PBO:0071253"}


id: CHEBI:15422
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP","termid":"CHEBI:15422"}


id: MONDO:0016797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A mitochondrial oxidative phosphorylation disorder in which mitochondrial DNA (mtDNA) level is lower than normal.","definition_xrefs":["PMID:24266892"],"gene_count":0,"genotype_count":0,"name":"obsolete multiple mitochondrial DNA deletion syndrome (obsolete MONDO:0016797)","secondary_identifiers":["icd11.foundation:194083556","Orphanet:254807"],"synonyms":[{"name":"multiple mtDNA deletion syndrome","type":"exact"}],"termid":"MONDO:0016797","xrefs":{"Monarch":{"xref_id":"0016797"}}}


id: GO:1903908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plasma membrane raft polarization.","definition_xrefs":["GO_REF:0000058","PMID:23575248","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of plasma membrane raft polarization","termid":"GO:1903906"},{"relation_name":"positively_regulates","term_name":"plasma membrane raft polarization","termid":"GO:0044858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of plasma membrane raft polarization","synonyms":[{"name":"activation of plasma membrane raft polarization","type":"narrow"},{"name":"up regulation of plasma membrane raft polarization","type":"exact"},{"name":"up-regulation of plasma membrane raft polarization","type":"exact"},{"name":"upregulation of plasma membrane raft polarization","type":"exact"}],"termid":"GO:1903908"}


id: GO:0061763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organelle membrane fusion process in which the membrane of a multivesicular body fuses with a lysosome to create a hybrid organelle.","definition_xrefs":["PMID:21118109","GOC:dph","GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"lysosomal membrane organization","termid":"GO:0097212"},{"relation_name":"part_of","term_name":"endosome to lysosome transport via multivesicular body sorting pathway","termid":"GO:0032510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"multivesicular body-lysosome fusion","synonyms":[{"name":"MVB-lysosome fusion","type":"exact"},{"name":"endosome-lysosome fusion","type":"related"},{"name":"fusion of MVB to lysosome","type":"exact"},{"name":"fusion of multivesicular body to lysosome","type":"exact"},{"name":"late endosome-lysosome fusion","type":"related"}],"termid":"GO:0061763"}


id: PATO:0001142
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001142 ig d concentration value (obsolete PATO:0001142)","termid":"PATO:0001142"}


id: MONDO:0016987
data:
  {"annotated_genes":["SJAG_16459","SJAG_01229"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85258,85257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008695"}]},"cv_name":"mondo","definition":"Neuroacanthocytosis (NA) syndromes are a group of genetic diseases characterized by the association of red blood cell acanthocytosis (deformed erythrocytes with spike-like protrusions) and progressive degeneration of the basal ganglia.","definition_xrefs":["Orphanet:263440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01229":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"neuroacanthocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1501","GARD:10902","NANDO:1200013","MESH:D054546","icd11.foundation:1012724153","DOID:0050765","NCIT:C84926"],"synonyms":[{"name":"neuroacanthocytosis syndrome","type":"related"}],"termid":"MONDO:0016987","terms_by_termid":{"MONDO:0008695":null},"xrefs":{"Monarch":{"xref_id":"0016987"}}}


id: GO:0070301
data:
  {"annotated_genes":["SJAG_01199","SJAG_00141","SJAG_04953","SJAG_04823","SJAG_01216","SJAG_02515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94987,99802,108630,118085,104846,117163],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.","definition_xrefs":["GOC:mah","CHEBI:16240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to reactive oxygen species","termid":"GO:0034614"},{"relation_name":"is_a","term_name":"response to hydrogen peroxide","termid":"GO:0042542"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_04823":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hydrogen peroxide","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070301","terms_by_termid":{"GO:0061692":null}}


id: GO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process in which immunoglobulin genes are diversified through the mechanism of gene conversion following the induction of and contributing to an immune response.","definition_xrefs":["GOC:add","PMID:14991701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion of immunoglobulin genes","termid":"GO:0002206"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0010467","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"gene conversion of immunoglobulin genes involved in immune response","synonyms":[{"name":"gene conversion of antibody genes during immune response","type":"related"},{"name":"gene conversion of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002207"}


id: GO:0005138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-6 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-6 receptor binding","synonyms":[{"name":"IL-6","type":"narrow"},{"name":"interleukin-6 receptor ligand","type":"narrow"}],"termid":"GO:0005138"}


id: PBO:0030935
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_nuclear_RNA_level_during_vegetative_growth","termid":"PBO:0030935"}


id: PATO:0000881
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000881 gestational period value (obsolete PATO:0000881)","termid":"PATO:0000881"}


id: GO:0034437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a glycoprotein from one side of a membrane to the other.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete glycoprotein transmembrane transporter activity (obsolete GO:0034437)","synonyms":[{"name":"glycoprotein transporter activity","type":"related"}],"termid":"GO:0034437"}


id: PBO:0001818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b2 (L-lactate cytochrome-c oxidoreductase) (predicted)","termid":"PBO:0001818"}


id: PBO:0051357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-10 (pseudogene)","termid":"PBO:0051357"}


id: MONDO:0019759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epispadias is a congenital genitourinary malformation belonging to the spectrum of the exstrophy-epispadias complex (EEC) and is characterized in males by an ectopic meatus or a mucosal strip in place of the urethra on the penile dorsum and in females by bifid clitoris and a variable cleft of the urethra.","definition_xrefs":["Orphanet:93928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exstrophy-epispadias complex","termid":"MONDO:0017919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"epispadias","secondary_identifiers":["UMLS:C0014588","MedDRA:10015088","SCTID:406476007","HP:0000039","icd11.foundation:397402420","MEDGEN:41839","ICD9:752.62","MESH:D004842","NCIT:C98923","GARD:19235"],"synonyms":[{"name":"epispadias","type":"exact"},{"name":"epispadias (disease)","type":"exact"}],"termid":"MONDO:0019759","xrefs":{"Monarch":{"xref_id":"0019759"}}}


id: MONDO:0012860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary thrombophilia due to congenital protein C deficiency","termid":"MONDO:0019145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombophilia due to protein C deficiency, autosomal recessive","secondary_identifiers":["DOID:0111904","GARD:13041","MEDGEN:394120","MESH:C567353","OMIM:612304","UMLS:C2676759"],"synonyms":[{"name":"Proc deficiency, autosomal recessive","type":"related"},{"name":"Protein C deficiency, autosomal recessive","type":"related"},{"name":"THPH4","type":"related"},{"name":"autosomal recessive hereditary thrombophilia due to protein C deficiency","type":"related"},{"name":"autosomal recessive protein C deficiency","type":"related"},{"name":"hereditary thrombophilia due to PC deficiency","type":"related"},{"name":"hereditary thrombophilia due to congenital protein C deficiency","type":"related"},{"name":"thrombophilia 3 due to protein C deficiency, autosomal recessive","type":"exact"},{"name":"thrombophilia due to PROTEIN C deficiency, autosomal recessive","type":"related"},{"name":"thrombophilia due to protein C deficiency, autosomal recessive","type":"exact"}],"termid":"MONDO:0012860","xrefs":{"Monarch":{"xref_id":"0012860"}}}


id: GO:0047975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine + phosphate = guanine + D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"guanosine phosphorylase activity","secondary_identifiers":["MetaCyc:RXN0-5199","RHEA:13233"],"synonyms":[{"name":"guanosine:phosphate D-ribosyltransferase activity","type":"related"},{"name":"guanosine:phosphate alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0047975"}


id: GO:0007551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of dosage compensation (obsolete GO:0007551)","synonyms":[{"name":"maintenance of dosage compensation","type":"exact"}],"termid":"GO:0007551"}


id: MONDO:0054550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial avascular necrosis of femoral head","termid":"MONDO:0012126"},{"relation_name":"is_a","term_name":"dysplasia of the proximal femoral epiphyses","termid":"MONDO:1030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avascular necrosis of femoral head, primary, 1","secondary_identifiers":["MEDGEN:1639295","OMIM:608805","UMLS:C4551562"],"synonyms":[{"name":"ANFH1","type":"related"},{"name":"Femoral head, avascular necrosis of","type":"related"},{"name":"avascular necrosis of femoral head, primary, 1","type":"exact"},{"name":"avascular necrosis of the femoral head","type":"exact"},{"name":"femoral head, aseptic necrosis of","type":"related"},{"name":"ischaemic necrosis of femoral head","type":"related"},{"name":"ischemic necrosis of femoral head","type":"related"},{"name":"osteonecrosis of femoral head","type":"related"}],"termid":"MONDO:0054550","xrefs":{"Monarch":{"xref_id":"0054550"}}}


id: MONDO:0012029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the CENPJ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly 6 with or without short stature","termid":"MONDO:0700054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 6, primary, autosomal recessive","secondary_identifiers":["GARD:15431","OMIM:608393","UMLS:C1842109","DOID:0070290","MEDGEN:330770","MESH:C564247"],"synonyms":[{"name":"CENPJ autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH6","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in CENPJ","type":"exact"},{"name":"microcephaly 6, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0012029","xrefs":{"Monarch":{"xref_id":"0012029"}}}


id: PBO:0073333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 9","termid":"PBO:0073333"}


id: GO:0102717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DIBOA-beta-D-glucoside + O2 + 2-oxoglutarate = TRIBOA-beta-D-glucoside + succinate + carbon dioxide.","definition_xrefs":["GOC:pz","EC:1.14.11.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated","termid":"GO:0050498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"DIBOA-glucoside oxygenase activity","secondary_identifiers":["MetaCyc:RXN-6685","RHEA:32115"],"termid":"GO:0102717"}


id: PBO:0050168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 24","termid":"PBO:0050168"}


id: PATO:0000779
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000779 absolute locomotor activity value (obsolete PATO:0000779)","termid":"PATO:0000779"}


id: PBO:0064473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 4, accessory subunit","termid":"PBO:0064473"}


id: GO:0017175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of 5'-ribonucleotides to ribonucleosides and phosphate, with specificity for IMP or GMP 5'-ribonucleotides and H2O as a nucleophile.","definition_xrefs":["EC:3.1.3.5","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete IMP-GMP specific 5'-nucleotidase activity (obsolete GO:0017175)","synonyms":[{"name":"IMP-GMP specific 5'-nucleotidase activity","type":"exact"}],"termid":"GO:0017175"}


id: FYPO:0005747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype","termid":"FYPO:0000149"},{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein transport","termid":"FYPO:0005747"}


id: PBO:0079065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 1-1","termid":"PBO:0079065"}


id: PBO:0039688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC regulator of WNT signaling pathway 2","termid":"PBO:0039688"}


id: PBO:0066935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 237","termid":"PBO:0066935"}


id: MONDO:0018654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired skeletal muscle disease","termid":"MONDO:0016105"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic dropped head syndrome","secondary_identifiers":["Orphanet:447881","EFO:1001987","GARD:21874"],"synonyms":[{"name":"isolated neck extensor myopathy","type":"exact"}],"termid":"MONDO:0018654","xrefs":{"Monarch":{"xref_id":"0018654"}}}


id: PBO:0090140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cdk11","termid":"PBO:0090140"}


id: PATO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000172 relative yield (obsolete PATO:0000172)","termid":"PATO:0000172"}


id: PBO:0029182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_6-phosphate_level_during_heat_shock","termid":"PBO:0029182"}


id: PBO:0110490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ibosomal protein L17 pseudogene 52","termid":"PBO:0110490"}


id: FYPO:0003366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of pyridoxine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pyridoxine import","termid":"FYPO:0003365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased pyridoxine import","synonyms":[{"name":"decreased pyridoxine import across plasma membrane","type":"exact"},{"name":"decreased pyridoxine import during mitotic cell cycle","type":"related"},{"name":"decreased pyridoxine import during vegetative growth","type":"exact"},{"name":"decreased pyridoxine import into cell","type":"exact"},{"name":"decreased pyridoxine uptake","type":"exact"},{"name":"reduced pyridoxine import","type":"exact"}],"termid":"FYPO:0003366"}


id: GO:0052161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of host processes resulting in the thickening of its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of defense-related host cell wall thickening (obsolete GO:0052161)","synonyms":[{"name":"modulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by organism of host defensive cell wall thickening","type":"related"}],"termid":"GO:0052161"}


id: GO:0007020
data:
  {"annotated_genes":["SJAG_03835","SJAG_00856","SJAG_07018","SJAG_02886","SJAG_02761","SJAG_01756","SJAG_02609","SJAG_02737","SJAG_03540","SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70915,71433,78758],"is_not":false,"summary":null,"term":"GO:0007020"},{"annotations":[116735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030954"},{"annotations":[106246,100787,99886,100183,116740,116986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051415"},{"annotations":[100788,118458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The process in which tubulin alpha-beta heterodimers begin aggregation to form an oligomeric tubulin structure (a microtubule seed). Microtubule nucleation is the initiating step in the formation of a microtubule in the absence of any existing microtubules ('de novo' microtubule formation).","definition_xrefs":["ISBN:0815316194","PMID:12517712","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"microtubule polymerization","termid":"GO:0046785"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"microtubule nucleation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Microtubule_nucleation"],"termid":"GO:0007020","terms_by_termid":{"GO:0007020":null,"GO:0030954":null,"GO:0051415":null,"GO:0051417":null}}


id: GO:2000873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H4 acetylation involved in response to DNA damage stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H4 acetylation involved in response to DNA damage stimulus (obsolete GO:2000873)","synonyms":[{"name":"regulation of histone H4 acetylation involved in DNA damage response","type":"exact"},{"name":"regulation of histone H4 acetylation involved in cellular DNA damage response","type":"exact"},{"name":"regulation of histone H4 acetylation involved in cellular response to DNA damage stimulus","type":"exact"},{"name":"regulation of histone H4 acetylation involved in response to DNA damage","type":"exact"},{"name":"regulation of histone H4 acetylation involved in response to genotoxic stress","type":"exact"}],"termid":"GO:2000873"}


id: PBO:0038739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 11, pseudogene","termid":"PBO:0038739"}


id: PBO:0030547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_valine_import","termid":"PBO:0030547"}


id: PBO:0003663
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TArgeting complex Subunit","termid":"PBO:0003663"}


id: PBO:0066289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member O, pseudogene","termid":"PBO:0066289"}


id: FYPO:0001313
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003751"},{"annotations":[119246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount, distribution, or morphology of a cell part is normal (i.e. indistinguishable from wild type) when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03250":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal subcellular component during vegetative growth","references_by_uniquename":{"PMID:26774782":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_03250"],"single_locus_genotype_uniquenames":["sst4delta","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal subcellular component during mitotic cell cycle","type":"related"},{"name":"normal subcellular structure during vegetative growth","type":"related"}],"termid":"FYPO:0001313","terms_by_termid":{"FYPO:0003751":null,"FYPO:0003780":null}}


id: PBO:0073903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 15 member 1","termid":"PBO:0073903"}


id: PBO:0042020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 77","termid":"PBO:0042020"}


id: GO:0030812
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72862,75832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of nucleotide catabolic process","termid":"GO:0030811"},{"relation_name":"is_a","term_name":"negative regulation of nucleotide metabolic process","termid":"GO:0045980"},{"relation_name":"negatively_regulates","term_name":"nucleotide catabolic process","termid":"GO:0009166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of nucleotide catabolic process","type":"exact"},{"name":"down-regulation of nucleotide catabolic process","type":"exact"},{"name":"downregulation of nucleotide catabolic process","type":"exact"},{"name":"inhibition of nucleotide catabolic process","type":"narrow"},{"name":"negative regulation of nucleotide breakdown","type":"exact"},{"name":"negative regulation of nucleotide catabolism","type":"exact"},{"name":"negative regulation of nucleotide degradation","type":"exact"}],"termid":"GO:0030812","terms_by_termid":{"GO:0045820":null}}


id: MONDO:0030476
data:
  {"annotated_genes":["SJAG_04700"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85838],"is_not":false,"summary":null,"term":"MONDO:0030476"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Galloway-Mowat syndrome","termid":"MONDO:0009627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Galloway-Mowat syndrome 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619609","MEDGEN:1794230","UMLS:C5562020"],"synonyms":[{"name":"GAMOS10","type":"exact"}],"termid":"MONDO:0030476","terms_by_termid":{"MONDO:0030476":null},"xrefs":{"Monarch":{"xref_id":"0030476"}}}


id: GO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell activation involved in immune response","synonyms":[{"name":"cell activation during immune response","type":"related"}],"termid":"GO:0002263"}


id: PBO:0004037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein (predicted)","termid":"PBO:0004037"}


id: SO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a dicistronic transcript.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_polycistronic_transcript","termid":"SO:0000690"},{"relation_name":"transcribed_to","term_name":"dicistronic_transcript","termid":"SO:0000079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_dicistronic_transcript","synonyms":[{"name":"gene with dicistronic transcript","type":"exact"}],"termid":"SO:0000692"}


id: PBO:0067332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 424, pseudogene","termid":"PBO:0067332"}


id: PBO:0049497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 4","termid":"PBO:0049497"}


id: GO:0030252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of growth hormone from secretory granules into the blood.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"growth hormone secretion","synonyms":[{"name":"somatotropin secretion","type":"exact"}],"termid":"GO:0030252"}


id: GO:2001191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gamma-delta T cell activation involved in immune response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-delta T cell activation involved in immune response","synonyms":[{"name":"regulation of gamma-delta T cell activation during immune response","type":"related"},{"name":"regulation of gamma-delta T lymphocyte activation during immune response","type":"related"},{"name":"regulation of gamma-delta T-cell activation during immune response","type":"related"},{"name":"regulation of gamma-delta T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:2001191"}


id: PBO:0084616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metalloprotease subunit of 19S regulatory particle; part of 26S proteasome lid; couples the deubiquitination and degradation of proteasome substrates; involved, independent of catalytic activity, in fission of mitochondria and peroxisomes; protein abundance increases in response to DNA replication stress","termid":"PBO:0084616"}


id: GO:0060196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the synthesis of antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis, on a template of DNA.","definition_xrefs":["PMID:18075583","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of antisense RNA transcription","termid":"GO:0060194"},{"relation_name":"positively_regulates","term_name":"antisense RNA transcription","termid":"GO:0009300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"positive regulation of antisense RNA transcription","termid":"GO:0060196"}


id: MONDO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pupil disorder","termid":"MONDO:0002285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"abnormal pupillary function","secondary_identifiers":["DOID:11518","HP:0007686","SCTID:72124005","UMLS:C0917967","ICD9:379.40","ICD9:379.49","MEDGEN:214629"],"synonyms":[{"name":"abnormal pupillary function","type":"exact"},{"name":"abnormal pupillary function (disease)","type":"exact"}],"termid":"MONDO:0001303","xrefs":{"Monarch":{"xref_id":"0001303"}}}


id: PBO:0085738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription initiation; acts at TATA-containing promoters; associates with the basal transcription factor TFIID; contains two bromodomains; corresponds to the C-terminal region of mammalian TAF1; redundant with Bdf1p; protein abundance increases in response to DNA replication stress; BDF2 has a paralog, BDF1, that arose from the whole genome duplication","termid":"PBO:0085738"}


id: MONDO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign form of insulitis which is an inflammation of the islets of Langerhans of the pancreas. The pancreas and in some cases the Pancreatic β-cells become infiltrated by polymorphonuclear leukocytes and infiltrated by mononuclear cells, leading to inflammation.","definition_xrefs":["EFO:0002502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"benign insulitis","secondary_identifiers":["PMID:20545565","Wikipedia:Insulitis"],"termid":"MONDO:0005176","xrefs":{"Monarch":{"xref_id":"0005176"}}}


id: PBO:0053438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 383","termid":"PBO:0053438"}


id: MONDO:0035581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare genetic lethal multiple congenital anomalies/dysmorphic syndrome characterized by early intrauterine growth retardation, generalized edema, craniofacial dysmorphism (such as microcephaly, brachycephaly, frontal bossing, hypertelorism, short palpebral fissures, or absent nasal bone), cerebellar hypoplasia, sex reversal in male fetuses, congenital heart defects (including septal and valve defects and cardiomegaly), and late fetal loss. [Orphanet:580933]","gene_count":0,"genotype_count":0,"name":"obsolete lethal brain and heart developmental defects (obsolete MONDO:0035581)","secondary_identifiers":["Orphanet:580933"],"termid":"MONDO:0035581","xrefs":{"Monarch":{"xref_id":"0035581"}}}


id: PBO:0071127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 129","termid":"PBO:0071127"}


id: FYPO:0005194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein degradation during mitotic S phase","synonyms":[{"name":"decreased protein breakdown during mitotic S phase","type":"exact"},{"name":"decreased protein catabolic process during mitotic S phase","type":"exact"},{"name":"decreased protein catabolism during mitotic S phase","type":"exact"},{"name":"decreased protein degradation during S phase during mitotic cell cycle","type":"related"},{"name":"decreased protein degradation during mitotic S phase during vegetative growth","type":"exact"},{"name":"reduced protein degradation during mitotic S phase","type":"exact"}],"termid":"FYPO:0005194"}


id: GO:0141085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an inflammasome-mediated signaling pathway.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of inflammasome-mediated signaling pathway","synonyms":[{"name":"regulation of inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141085"}


id: FYPO:0000963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on hydroxyurea","synonyms":[{"name":"normal cell population growth in presence of hydroxyurea","type":"exact"},{"name":"normal cell population growth on HU","type":"exact"},{"name":"normal cell population growth on hydroxyurea","type":"exact"},{"name":"normal vegetative cell population growth on hydroxyurea","type":"exact"}],"termid":"FYPO:0000963"}


id: GO:1901753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene A4.","definition_xrefs":["GOC:yaf","PMID:23242647","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"leukotriene A4 metabolic process","termid":"GO:1901751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"leukotriene A4 biosynthetic process","synonyms":[{"name":"LTA4 biosynthesis","type":"exact"},{"name":"eoxin A4 biosynthesis","type":"exact"},{"name":"leukotriene A4 anabolism","type":"exact"},{"name":"leukotriene A4 biosynthesis","type":"exact"},{"name":"leukotriene A4 formation","type":"exact"},{"name":"leukotriene A4 synthesis","type":"exact"}],"termid":"GO:1901753"}


id: GO:1900035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to heat.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to heat","termid":"GO:1900034"},{"relation_name":"negatively_regulates","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to heat","synonyms":[{"name":"down regulation of cellular response to heat","type":"related"},{"name":"down regulation of cellular response to heat stress","type":"exact"},{"name":"down-regulation of cellular response to heat","type":"related"},{"name":"down-regulation of cellular response to heat stress","type":"exact"},{"name":"downregulation of cellular response to heat","type":"related"},{"name":"downregulation of cellular response to heat stress","type":"exact"},{"name":"inhibition of cellular response to heat","type":"related"},{"name":"inhibition of cellular response to heat stress","type":"exact"},{"name":"negative regulation of cellular response to heat stress","type":"exact"}],"termid":"GO:1900035"}


id: PBO:0045750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein Barr virus modification site 1","termid":"PBO:0045750"}


id: PBO:0001183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug99","termid":"PBO:0001183"}


id: GO:2000097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle cell-matrix adhesion.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-matrix adhesion","termid":"GO:0001952"},{"relation_name":"regulates","term_name":"smooth muscle cell-matrix adhesion","termid":"GO:0061302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell-matrix adhesion","termid":"GO:2000097"}


id: GO:0044137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont occurring on or near its host rhizosphere. The host rhizosphere is defined as total below-ground surfaces of a plant as a habitat for its symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete growth of symbiont on or near host rhizosphere (obsolete GO:0044137)","termid":"GO:0044137"}


id: GO:0044064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host respiratory system process (obsolete GO:0044064)","synonyms":[{"name":"regulation by symbiont of host respiratory system process","type":"exact"}],"termid":"GO:0044064"}


id: PBO:0057839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3155a","termid":"PBO:0057839"}


id: PBO:0027375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_with_condensed_chromosomes,_septated_cell_with_1C_DNA_content_per_nucleus","termid":"PBO:0027375"}


id: PBO:0068784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 21, pseudogene","termid":"PBO:0068784"}


id: GO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response resulting from recognition of immune complexes via complement or Fc receptors on effector cells leading to activation of neutrophils and other leukocytes and damage to bystander tissue.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"},{"relation_name":"is_a","term_name":"hypersensitivity","termid":"GO:0002524"},{"relation_name":"is_a","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type III hypersensitivity","secondary_identifiers":["Wikipedia:Type_III_hypersensitivity"],"termid":"GO:0001802"}


id: MONDO:0019897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 12","termid":"MONDO:0016877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 12q","secondary_identifiers":["Orphanet:96149","GARD:19328","UMLS:C5438460","MEDGEN:1761314"],"synonyms":[{"name":"distal deletion 12q","type":"exact"},{"name":"distal monosomy type 12q","type":"exact"},{"name":"monosomy 12qter","type":"exact"},{"name":"telomeric deletion 12q","type":"exact"}],"termid":"MONDO:0019897","xrefs":{"Monarch":{"xref_id":"0019897"}}}


id: PBO:0043084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic beta 4 subunit","termid":"PBO:0043084"}


id: MONDO:0004406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mixed germ cell tumor of central nervous system that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult central nervous system germ cell tumor","termid":"MONDO:0003405"},{"relation_name":"is_a","term_name":"mixed germ cell tumor of central nervous system","termid":"MONDO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult central nervous system mixed germ cell tumor","secondary_identifiers":["MEDGEN:231038","NCIT:C27402","UMLS:C1332195","DOID:7945"],"synonyms":[{"name":"adult central nervous system mixed germ cell tumor","type":"exact"},{"name":"adult mixed germ cell tumor of central nervous system","type":"exact"},{"name":"adult mixed germ cell tumour of central nervous system","type":"exact"},{"name":"central nervous system Mixed germ cell tumor","type":"broad"},{"name":"central nervous system Mixed germ cell tumour","type":"broad"},{"name":"mixed germ cell tumor of central nervous system of adults","type":"exact"},{"name":"mixed germ cell tumour of central nervous system of adults","type":"exact"}],"termid":"MONDO:0004406","xrefs":{"Monarch":{"xref_id":"0004406"}}}


id: GO:0007433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination in a larval organism of where the salivary gland forms, the total number of salivary gland cells and how many cells are allocated to each of the specialised cell types within the salivary gland.","definition_xrefs":["GOC:tb","PMID:11598957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland boundary specification","termid":"GO:0007432"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval salivary gland boundary specification","synonyms":[{"name":"larval salivary gland determination","type":"broad"}],"termid":"GO:0007433"}


id: PBO:0061887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid binding protein/cell adhesion molecule like","termid":"PBO:0061887"}


id: GO:0047062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+-)-trans-acenaphthene-1,2-diol + 2 NADP+ = acenaphthene-1,2-dione + 2 H+ + 2 NADPH.","definition_xrefs":["EC:1.10.1.1","RHEA:22184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, NAD or NADP as acceptor","termid":"GO:0016680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trans-acenaphthene-1,2-diol dehydrogenase activity","secondary_identifiers":["MetaCyc:1.10.1.1-RXN","KEGG_REACTION:R04059"],"synonyms":[{"name":"(+-)-trans-acenaphthene-1,2-diol:NADP+ oxidoreductase activity","type":"related"},{"name":"trans-1,2-acenaphthenediol dehydrogenase activity","type":"related"}],"termid":"GO:0047062"}


id: PBO:0061366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 26","termid":"PBO:0061366"}


id: PBO:0004728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase subunit 3","termid":"PBO:0004728"}


id: PBO:0114834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin and fungal killer toxin kp4-like domain, cysteine-rich, possibly secreted Mug117","termid":"PBO:0114834"}


id: MONDO:0020724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebral cavernous malformation","termid":"MONDO:0000820"},{"relation_name":"is_a","term_name":"famililal cerebral cavernous malformations","termid":"MONDO:0031037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cerebral cavernous malformation 1","secondary_identifiers":["MEDGEN:237128","OMIM:116860","UMLS:C1366911","DOID:0080491"],"synonyms":[{"name":"CCM","type":"related"},{"name":"cavernous angioma, familial","type":"related"},{"name":"cavernous angiomatous malformations","type":"related"},{"name":"cavernous malformations of CNS and retina","type":"related"},{"name":"cerebral capillary malformations","type":"related"},{"name":"cerebral cavernous malformation 1","type":"exact"},{"name":"cerebral cavernous malformations","type":"related"},{"name":"cerebral cavernous malformations 1","type":"related"},{"name":"cerebral cavernous malformations-1","type":"exact"},{"name":"familial cerebral cavernous malformation 1","type":"exact"},{"name":"hyperkeratotic cutaneous capillary-Venous malformations associated with cerebral capillary malformations","type":"related"}],"termid":"MONDO:0020724","xrefs":{"Monarch":{"xref_id":"0020724"}}}


id: FYPO:0002470
data:
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id: PBO:0069457
data:
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id: GO:1903047
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id: GO:0010826
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id: MONDO:0006855
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id: GO:0042139
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id: FYPO:0004817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from antisense transcription of ribosomal DNA measured in a cell is lower than normal.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased antisense RNA level","termid":"FYPO:0004816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased rDNA antisense small RNA level","synonyms":[{"name":"decreased accumulation of rDNA antisense small RNAs","type":"related"},{"name":"decreased antisense small RNA at rDNA","type":"exact"},{"name":"decreased antisense transcription-derived small RNA level at rDNA","type":"exact"},{"name":"decreased rDNA antisense small RNA accumulation","type":"related"},{"name":"decreased rDNA antisense small RNA level during mitotic cell cycle","type":"related"},{"name":"decreased rDNA antisense small RNA level during vegetative growth","type":"exact"},{"name":"reduced rDNA antisense small RNA level","type":"exact"}],"termid":"FYPO:0004817"}


id: MONDO:0007624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Flynn-Aird syndrome is a neuroectodermal disorder involving the nervous, cutaneous, skeletal, and glandular systems. It has been described in 10 members from five generations of one family. Clinical manifestations include eye abnormalities (cataracts, retinitis pigmentosa, and myopia), sensorineural deafness, ataxia, peripheral neuritis, epilepsy, dementia, skin atrophy and striking dental caries. Patients also present with muscle wasting, joint stiffness and bone cysts. Flynn-Aird syndrome is transmitted as an autosomal dominant trait. It shows some similarities to the syndromes of Werner, Refsum and Cockayne.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic nervous system disorder (obsolete MONDO:0019117)","termid":"MONDO:0019117"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"premature aging syndrome","termid":"MONDO:0019303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019303"],"is_obsolete":false,"name":"Flynn-Aird syndrome","secondary_identifiers":["UMLS:C0343108","MESH:C537066","MEDGEN:91009","Orphanet:2047","GARD:2347","OMIM:136300","SCTID:239056006"],"synonyms":[{"name":"Flynn Aird syndrome","type":"related"},{"name":"Flynn-Aird syndrome","type":"exact"},{"name":"cataracts, retinitis pigmentosa, sensorineural hearing loss, ataxia, peripheral neuritis, epilepsy, dementia, skin atrophy, chronic ulceration, dental","type":"related"}],"termid":"MONDO:0007624","xrefs":{"Monarch":{"xref_id":"0007624"}}}


id: PBO:0078185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 2","termid":"PBO:0078185"}


id: MONDO:0008918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carnitine-acylcarnitine translocase (CACT) deficiency is a life-threatening, inherited disorder of fatty acid oxidation which usually presents in the neonatal period with severe hypoketotic hypoglycemia, hyperammonemia, cardiomyopathy and/or arrhythmia, hepatic dysfunction, skeletal muscle weakness, and encephalopathy.","definition_xrefs":["Orphanet:159"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hypertrophic cardiomyopathy","termid":"MONDO:0005045"},{"relation_name":"excluded_subClassOf","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"},{"relation_name":"is_a","term_name":"disorder of carnitine cycle and carnitine transport","termid":"MONDO:0017716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"carnitine-acylcarnitine translocase deficiency","secondary_identifiers":["NCIT:C133086","MEDGEN:91000","SCTID:238003000","OMIM:212138","UMLS:C0342791","icd11.foundation:677949122","MESH:C562812","DOID:0111585","GARD:1123","NANDO:1200972","NANDO:2200511"],"synonyms":[{"name":"CACT deficiency","type":"exact"},{"name":"CACTD","type":"related"},{"name":"CARNITINE-acylcarnitine translocase deficiency","type":"related"},{"name":"Cact deficiency","type":"related"},{"name":"carnitine-acylcarnitine translocase deficiency","type":"exact"}],"termid":"MONDO:0008918","xrefs":{"Monarch":{"xref_id":"0008918"}}}


id: MONDO:0021809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders of the autonomic nervous system occurring as a primary condition. Manifestations can involve any or all body systems but commonly affect the blood pressure and heart rate.","definition_xrefs":["MESH:D054969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysautonomia","termid":"MONDO:0044872"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary dysautonomia","synonyms":[{"name":"Dysautonomias","type":"related"},{"name":"Dysautonomias, primary","type":"related"},{"name":"dysautonomia","type":"related"},{"name":"dysautonomia, primary","type":"related"},{"name":"primary dysautonomia","type":"exact"}],"termid":"MONDO:0021809","xrefs":{"Monarch":{"xref_id":"0021809"}}}


id: GO:0003061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine into the bloodstream or released from nerve endings modulates the force of heart musclecontraction.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by chemical signal","termid":"GO:0003099"},{"relation_name":"part_of","term_name":"positive regulation of the force of heart contraction by epinephrine-norepinephrine","termid":"GO:0001997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by norepinephrine","synonyms":[{"name":"increased force of heart contraction by adrenaline","type":"related"},{"name":"increased force of heart contraction by norepinephrine","type":"exact"},{"name":"noradrenaline cardiac inotropy","type":"exact"},{"name":"noradrenaline regulation of the strength of heart muscle contraction","type":"exact"},{"name":"norepinephrine cardiac inotropy","type":"exact"},{"name":"positive regulation of heart contraction by adrenaline","type":"related"},{"name":"positive regulation of heart contraction by norepinephrine","type":"related"}],"termid":"GO:0003061"}


id: PBO:0062650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily A member 1","termid":"PBO:0062650"}


id: FYPO:0005366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein phosphorylation during mitosis","synonyms":[{"name":"abolished protein phosphorylation during M phase of mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during mitotic M phase","type":"related"},{"name":"protein phosphorylation abolished during mitosis","type":"exact"}],"termid":"FYPO:0005366"}


id: MONDO:0012979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the RSPH9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 12","secondary_identifiers":["GARD:15575","OMIM:612650","DOID:0110601","UMLS:C2675228","MEDGEN:436379","MESH:C567211"],"synonyms":[{"name":"CILD12","type":"exact"},{"name":"RSPH9 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 12","type":"related"},{"name":"ciliary dyskinesia, primary, 12, without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 12","type":"exact"},{"name":"primary ciliary dyskinesia 12 without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in RSPH9","type":"exact"},{"name":"primary ciliary dyskinesia type 12","type":"exact"}],"termid":"MONDO:0012979","xrefs":{"Monarch":{"xref_id":"0012979"}}}


id: MONDO:0019473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon mature T-cell lymphoma of intraepithelial lymphocytes. It usually arises from the small intestine, most commonly the jejunum or ileum. Other less frequent primary anatomic sites include the duodenum, stomach, colon, or outside the gastrointestinal tract. It is seen with increased frequency in regions with a high prevalence of celiac disease.","definition_xrefs":["NCIT:C4737"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare tumor of small intestine (obsolete MONDO:0018505)","termid":"MONDO:0018505"},{"relation_name":"is_a","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"enteropathy-associated T-cell lymphoma","secondary_identifiers":["Orphanet:86880","UMLS:C0456889","ICDO:9717/3","ICD9:202.70","GARD:9809","MedDRA:10022703","MESH:D058527","SCTID:277654008","MEDGEN:96832","ONCOTREE:EATL","icd11.foundation:958629729"],"synonyms":[{"name":"EATCL","type":"related"},{"name":"EATL","type":"exact"},{"name":"EATL, type I","type":"exact"},{"name":"ETTL","type":"exact"},{"name":"enteropathy associated T-cell lymphoma","type":"exact"},{"name":"enteropathy-associated T-cell lymphoma, type I","type":"exact"},{"name":"enteropathy-type T-cell lymphoma","type":"exact"},{"name":"high-grade pleomorphic peripheral T-cell lymphoma","type":"related"},{"name":"intestinal T-cell lymphoma","type":"exact"}],"termid":"MONDO:0019473","xrefs":{"Monarch":{"xref_id":"0019473"}}}


id: PBO:0049460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYG2 antisense RNA 1","termid":"PBO:0049460"}


id: PBO:0038510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 5","termid":"PBO:0038510"}


id: GO:2001188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"regulates","term_name":"T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:0002291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","synonyms":[{"name":"regulation of T lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"regulation of T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"regulation of T-lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"}],"termid":"GO:2001188"}


id: PBO:0051774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and ankyrin repeat containing 1","termid":"PBO:0051774"}


id: PBO:0047306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FARSB pseudogene 1","termid":"PBO:0047306"}


id: MONDO:0016238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solitary fibrous tumor (SFT) represents a diverse group of ubiquitous rare spindle cell neoplasms that may be benign or malignant and that most frequently arises from the pleura and peritoneum and rarely from other sites such as head and neck, liver and skeletal muscle. SFT may be clinically asymptomatic or may present with enlarging mass, compressive effects depending on the site involved and rarely with paraneoplastic manifestations (osteoarthropathy or hypoglycemia).","definition_xrefs":["Orphanet:2126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblastic neoplasm","termid":"MONDO:0006209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solitary fibrous tumor","secondary_identifiers":["MEDGEN:224764","MedDRA:10018825","ICD9:238.1","MESH:D054364","ICDO:8815/1","ICDO:8815/0","ONCOTREE:SFT","ICDO:9051/0","MESH:D006393","NCIT:C7634","UMLS:C1266119","GARD:15014"],"synonyms":[{"name":"SFT","type":"exact"},{"name":"hemangiopericytoma","type":"related"},{"name":"localised fibrous mesothelioma","type":"exact"},{"name":"localised fibrous tumour","type":"exact"},{"name":"localized fibrous mesothelioma","type":"exact"},{"name":"localized fibrous tumor","type":"exact"},{"name":"solitary fibrous tumor","type":"exact"},{"name":"solitary fibrous tumor/hemangiopericytoma","type":"related"},{"name":"submesothelial fibroma","type":"exact"}],"termid":"MONDO:0016238","xrefs":{"Monarch":{"xref_id":"0016238"}}}


id: GO:1904303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maternal process involved in parturition.","definition_xrefs":["GOC:TermGenie","PMID:1849751","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of maternal process involved in parturition","termid":"GO:1904301"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"maternal process involved in parturition","termid":"GO:0060137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of maternal process involved in parturition","synonyms":[{"name":"activation of maternal process involved in parturition","type":"narrow"},{"name":"up regulation of maternal process involved in parturition","type":"exact"},{"name":"up-regulation of maternal process involved in parturition","type":"exact"},{"name":"upregulation of maternal process involved in parturition","type":"exact"}],"termid":"GO:1904303"}


id: GO:0044303
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the smaller branches of an axon that emanate from the main axon cylinder.","definition_xrefs":["NIF_Subcellular:sao1470140754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon collateral","termid":"GO:0044303"}


id: MONDO:1011899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olivopontocerebellar degeneration, non-human animal","secondary_identifiers":["OMIA:002454"],"termid":"MONDO:1011899","xrefs":{"Monarch":{"xref_id":"1011899"}}}


id: GO:0016618
data:
  {"annotated_genes":["SJAG_01432","SJAG_00281"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74934,75080],"is_not":false,"summary":null,"term":"GO:0016618"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-glycerate + NAD(P)+ = 3-hydroxypyruvate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxypyruvate reductase [NAD(P)H] activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:HYDROXYPYRUVATE-REDUCTASE-RXN"],"synonyms":[{"name":"D-glycerate dehydrogenase activity","type":"related"},{"name":"D-glycerate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"NADH:hydroxypyruvate reductase activity","type":"related"},{"name":"beta-hydroxypyruvate reductase activity","type":"related"},{"name":"hydroxypyruvate reductase activity","type":"broad"}],"termid":"GO:0016618","terms_by_termid":{"GO:0016618":null}}


id: SO:0001704
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 14th residue (a lysine), from the start of the H3 histone protein is acetylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K14_acetylation_site","synonyms":[{"name":"H3K14 acetylation site","type":"exact"},{"name":"H3K14ac","type":"exact"}],"termid":"SO:0001704"}


id: GO:0051280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"is_a","term_name":"positive regulation of sequestering of calcium ion","termid":"GO:0051284"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transport","termid":"GO:1903170"},{"relation_name":"negatively_regulates","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of release of sequestered calcium ion into cytosol","synonyms":[{"name":"down regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"down-regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"downregulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"inhibition of release of sequestered calcium ion into cytosol","type":"narrow"},{"name":"negative regulation of calcium ion (Ca2+) mobilization","type":"broad"},{"name":"negative regulation of calcium mobilization","type":"broad"},{"name":"negative regulation of cytoplasmic release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of cytoplasmic release of stored calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of cytosolic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of cytosolic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of release of sequestered calcium ion into cytoplasm","type":"broad"},{"name":"negative regulation of release of stored calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of release of stored calcium ion (Ca2+) into cytoplasm","type":"broad"},{"name":"negative regulation of release of stored calcium ion (Ca2+) into cytosol","type":"exact"}],"termid":"GO:0051280"}


id: PBO:0082085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase; synthesizes PRPP, which is required for nucleotide, histidine, and tryptophan biosynthesis; one of five related enzymes, which are active as heteromultimeric complexes; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0082085"}


id: MONDO:0017777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rat-bite fever (obsolete MONDO:0017777)","termid":"MONDO:0017777","xrefs":{"Monarch":{"xref_id":"0017777"}}}


id: PBO:0004224
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.6.1.1","termid":"PBO:0004224"}


id: PBO:0062025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 7","termid":"PBO:0062025"}


id: PBO:0046719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 5","termid":"PBO:0046719"}


id: MONDO:0957876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 10","secondary_identifiers":["MEDGEN:1846713","DOID:0081429","UMLS:C5882703","OMIM:620542"],"termid":"MONDO:0957876","xrefs":{"Monarch":{"xref_id":"0957876"}}}


id: GO:0072133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric mesenchymal tissue are generated and organized. Metanephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme morphogenesis","termid":"GO:0072131"},{"relation_name":"part_of","term_name":"metanephric mesenchyme development","termid":"GO:0072075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric mesenchyme morphogenesis","termid":"GO:0072133"}


id: GO:0043444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of acetone, propan-2-one.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acetone catabolic process (obsolete GO:0043444)","synonyms":[{"name":"2-propanone catabolic process","type":"exact"},{"name":"2-propanone catabolism","type":"exact"},{"name":"acetone breakdown","type":"exact"},{"name":"acetone catabolism","type":"exact"},{"name":"acetone degradation","type":"exact"},{"name":"dimethyl ketone catabolic process","type":"exact"},{"name":"dimethyl ketone catabolism","type":"exact"},{"name":"propan-2-one catabolic process","type":"exact"},{"name":"propan-2-one catabolism","type":"exact"}],"termid":"GO:0043444"}


id: PATO:0000987
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000987 relative consistency (obsolete PATO:0000987)","termid":"PATO:0000987"}


id: PBO:0060543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 antisense RNA 3","termid":"PBO:0060543"}


id: FYPO:0002368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K4 trimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 trimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K4me3 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002368"}


id: GO:0022821
data:
  {"annotated_genes":["SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"}]},"cv_name":"molecular_function","definition":"Catalysis of the active transport of a potassium ion across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"metal cation:monoatomic cation antiporter activity","termid":"GO:0140828"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"solute:potassium antiporter activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"potassium ion antiporter activity","type":"exact"}],"termid":"GO:0022821","terms_by_termid":{"GO:0015386":null}}


id: GO:0043043
data:
  {"annotated_genes":["SJAG_00988","SJAG_00792","SJAG_04031","SJAG_04032","SJAG_00469","SJAG_02599","SJAG_03494","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93899,93906,105197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[108230,78454,77125,57741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[93854],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide.","definition_xrefs":["GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03494":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9037628"],"synonyms":[{"name":"peptide anabolism","type":"exact"},{"name":"peptide biosynthesis","type":"exact"},{"name":"peptide formation","type":"exact"},{"name":"peptide synthesis","type":"exact"}],"termid":"GO:0043043","terms_by_termid":{"GO:0006750":null,"GO:0031169":null,"GO:1905569":null}}


id: PBO:0090117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L30","termid":"PBO:0090117"}


id: PBO:0054417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1813","termid":"PBO:0054417"}


id: GO:0140426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding of a pattern recognition receptor (PRR) to activate a plant innate immune response. PAMP-triggered immunity PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["PMID:25744358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"pathogen-associated molecular pattern receptor signaling pathway","synonyms":[{"name":"MAMP-triggered immunity signalling","type":"exact"},{"name":"PAMP receptor signaling pathway","type":"exact"},{"name":"PAMP-triggered immunity signalling pathway","type":"exact"},{"name":"PTI signalling","type":"exact"},{"name":"pathogen-associated molecular pattern signalling","type":"exact"}],"termid":"GO:0140426"}


id: MONDO:0018272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A small cell carcinoma that involves the ovary.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete small cell carcinoma of the ovary (obsolete MONDO:0018272)","termid":"MONDO:0018272","xrefs":{"Monarch":{"xref_id":"0018272"}}}


id: PBO:0011484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc1","termid":"PBO:0011484"}


id: PBO:0057791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3117","termid":"PBO:0057791"}


id: PBO:0031360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_amphotericin_B","termid":"PBO:0031360"}


id: GO:0018474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-formylbenzoate + H2O + NAD+ = 2 H+ + NADH + phthalate.","definition_xrefs":["RHEA:27298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-formylbenzoate dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.2.1.78","UM-BBD_reactionID:r0490"],"synonyms":[{"name":"2-carboxybenzaldehyde dehydrogenase activity","type":"exact"}],"termid":"GO:0018474"}


id: MONDO:0005661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Babesiosis refers to a condition caused by microscopic parasites that infect the red blood cells. Many people who are infected with Babesia parasites do not experience any symptoms of the condition. When present, signs and symptoms may include flu-like symptoms such as fever, chills, headache, body aches, nausea and fatigue. In severe cases, babesiosis can be associated with hemolytic anemia. Babesia parasites are primarily spread by infected ticks. Treatment is generally only required in people who develop symptoms of the condition. When necessary, affected people are often prescribed a combination of antimicrobial medications along with supportive care to manage symptoms.","direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"babesiosis","secondary_identifiers":["NORD:832","ICD9:088.82","SCTID:21061004","UMLS:C0004576","MESH:D001404","GARD:5878","icd11.foundation:1947003329","EFO:0007162","ICD10CM:B60.0","MedDRA:10003965","DOID:9643","MEDGEN:2523","NCIT:C84581","Orphanet:108"],"synonyms":[{"name":"Babesia caused disease or disorder","type":"exact"},{"name":"Babesia disease or disorder","type":"exact"},{"name":"Babesia infectious disease","type":"exact"},{"name":"Babesia parasite infection","type":"related"},{"name":"Human babesiosis","type":"related"},{"name":"babesiasis","type":"exact"},{"name":"infection by Babesia","type":"exact"},{"name":"piroplasmosis","type":"exact"}],"termid":"MONDO:0005661","xrefs":{"Monarch":{"xref_id":"0005661"}}}


id: GO:2000514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of CD4-positive, alpha-beta T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000514"}


id: PBO:0091100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S8","termid":"PBO:0091100"}


id: PBO:0051692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit B","termid":"PBO:0051692"}


id: PBO:0058342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4715","termid":"PBO:0058342"}


id: PBO:0109360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L2 adaptor subunit of SYVN1 ubiquitin ligase","termid":"PBO:0109360"}


id: SO:1000093
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The replacement of a single amino acid by another.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000093 sequence_variant_causing_amino_acid_substitution (obsolete SO:1000093)","synonyms":[{"name":"mutation causing amino acid substitution","type":"related"},{"name":"sequence variant causing amino acid substitution","type":"exact"}],"termid":"SO:1000093"}


id: GO:0052689
data:
  {"annotated_genes":["SJAG_04110","SJAG_04323","SJAG_02487","SJAG_00936","SJAG_01824","SJAG_04973","SJAG_02428","SJAG_04105","SJAG_02089","SJAG_04846","SJAG_01259","SJAG_00308","SJAG_00734","SJAG_04311","SJAG_02543","SJAG_05008","SJAG_02100","SJAG_05221","SJAG_02093","SJAG_02268","SJAG_01198","SJAG_03604","SJAG_01628","SJAG_01797","SJAG_01570","SJAG_02091","SJAG_04790","SJAG_02068","SJAG_00443","SJAG_01248","SJAG_03204","SJAG_02907","SJAG_04738","SJAG_01036","SJAG_02015","SJAG_04285","SJAG_03545","SJAG_00158","SJAG_03377"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69757,70565,100737],"is_not":false,"summary":null,"term":"GO:0052689"},{"annotations":[74271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003847"},{"annotations":[72866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017057"},{"annotations":[57325,57061,59046,63344,64063,66613,75622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002161"},{"annotations":[98452,75836,77633,101869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004045"},{"annotations":[105727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043907"},{"annotations":[73247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051500"},{"annotations":[80101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061685"},{"annotations":[70423,65776,113851,67337,93718,64803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004622"},{"annotations":[77076,78630,78181,70743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047372"},{"annotations":[72543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050185"},{"annotations":[70788,78353,76305,77098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004623"},{"annotations":[78316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051722"},{"annotations":[74674,74732,77106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004771"},{"annotations":[71173,59743,58247,93719,69439,98269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004806"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a carboxylic ester bond.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00308":null,"SJAG_00443":null,"SJAG_00734":null,"SJAG_00936":null,"SJAG_01036":null,"SJAG_01198":null,"SJAG_01248":null,"SJAG_01259":null,"SJAG_01570":null,"SJAG_01628":null,"SJAG_01797":null,"SJAG_01824":null,"SJAG_02015":null,"SJAG_02068":null,"SJAG_02089":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02268":null,"SJAG_02428":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02907":null,"SJAG_03204":null,"SJAG_03377":null,"SJAG_03545":null,"SJAG_03604":null,"SJAG_04105":null,"SJAG_04110":null,"SJAG_04285":null,"SJAG_04311":null,"SJAG_04323":null,"SJAG_04738":null,"SJAG_04790":null,"SJAG_04846":null,"SJAG_04973":null,"SJAG_05008":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"carboxylic ester hydrolase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00630","Reactome:R-HSA-5693691","UM-BBD_reactionID:r1025","GO:0004091","Reactome:R-HSA-9749792","GO:0004759","GO:0016789","EC:3.1.1.-","Reactome:R-HSA-8937442","GO:0004302"],"synonyms":[{"name":"carboxylate esterase activity","type":"related"},{"name":"carboxylic esterase activity","type":"related"},{"name":"hydrolase activity acting on ester bonds","type":"related"}],"termid":"GO:0052689","terms_by_termid":{"GO:0002161":null,"GO:0003847":null,"GO:0004045":null,"GO:0004622":null,"GO:0004623":null,"GO:0004771":null,"GO:0004806":null,"GO:0017057":null,"GO:0043907":null,"GO:0047372":null,"GO:0050185":null,"GO:0051500":null,"GO:0051722":null,"GO:0052689":null,"GO:0061685":null}}


id: GO:0018317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of a carbon atom of a peptidyl-tryptophan residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein C-linked glycosylation","termid":"GO:0018103"},{"relation_name":"is_a","term_name":"peptidyl-tryptophan modification","termid":"GO:0018211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein C-linked glycosylation via tryptophan","synonyms":[{"name":"protein amino acid C-linked glycosylation via tryptophan","type":"exact"}],"termid":"GO:0018317"}


id: GO:0140532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of osmosensory signaling MAPK cascade.","definition_xrefs":["PMID:31911490"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of osmosensory signaling MAPK cascade (obsolete GO:0140532)","termid":"GO:0140532"}


id: PBO:0069468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 733, pseudogene","termid":"PBO:0069468"}


id: PBO:0086807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YER039C-A is not an essential gene","termid":"PBO:0086807"}


id: PBO:0045107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA meiotic recombinase 1","termid":"PBO:0045107"}


id: PBO:0072510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 39","termid":"PBO:0072510"}


id: PBO:0054644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2049","termid":"PBO:0054644"}


id: GO:0007347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that modulates the rate or extent of the progression through the preblastoderm mitotic cell cycle.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle, embryonic","termid":"GO:0009794"},{"relation_name":"regulates","term_name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of preblastoderm mitotic cell cycle","synonyms":[{"name":"modulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"preblastoderm mitotic cell cycle modulation","type":"exact"},{"name":"preblastoderm mitotic cell cycle regulation","type":"exact"},{"name":"preblastoderm mitotic cell cycle regulator","type":"related"},{"name":"regulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"regulation of progression through preblastoderm mitotic cell cycle","type":"exact"}],"termid":"GO:0007347"}


id: PBO:0002526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B box","termid":"PBO:0002526"}


id: MONDO:0014628
data:
  {"annotated_genes":["SJAG_00233"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85033],"is_not":false,"summary":null,"term":"MONDO:0014628"}]},"cv_name":"mondo","definition":"Any bilateral striopallidodentate calcinosis in which the cause of the disease is a mutation in the XPR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:901404","OMIM:616413","GARD:16107","UMLS:C4225335"],"synonyms":[{"name":"IBGC6","type":"related"},{"name":"XPR1 bilateral striopallidodentate calcinosis","type":"exact"},{"name":"basal ganglia calcification, idiopathic, 6","type":"exact"},{"name":"basal ganglia calcification, idiopathic, type 6","type":"exact"},{"name":"bilateral striopallidodentate calcinosis caused by mutation in XPR1","type":"exact"}],"termid":"MONDO:0014628","terms_by_termid":{"MONDO:0014628":null},"xrefs":{"Monarch":{"xref_id":"0014628"}}}


id: GO:0033793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 2',4,4',6'-tetrahydroxychalcone 4'-O-beta-D-glucoside + H+ + O2 = aureusidin 6-O-beta-glucoside + H2O, 2 2',3,4,4',6'-pentahydroxychalcone 4'-O-beta-D-glucoside + 2 H+ + O2 = 2 aureusidin 6-O-beta-glucoside + 2 H2O, and 2',3,4,4',6'-pentahydroxychalcone 4'-O-beta-D-glucoside + H+ + O2 = bracteatin 6-O-beta-glucoside + H2O. This activity consists of two separate chemical transformations: 3-hydroxylation and oxidative cyclization (2',-dehydrogenation).","definition_xrefs":["EC:1.21.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aureusidin synthase activity","synonyms":[{"name":"2',4,4',6'-tetrahydroxychalcone:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0033793"}


id: PBO:0001621
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nomencature conflict, prs1 is the primary name for SPBC19C7.06 using unified nomenclature for tRNA ligases","termid":"PBO:0001621"}


id: MONDO:0015230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anophthalmia-megalocornea-cardiopathy-skeletal anomalies syndrome is a multiple congenital anomalies syndrome, reported in the offsprings of a consanguineous couple and characterized by multiple congenital skeletal (dolichocephaly, skull asymmetry, camptodactyly, clubfoot), muscular (muscle hypoplasia), ocular (anophthalmia, buphthalmos, retinal detachment, aniridia) and cardiac (prolapse of tricuspid valves, mitral and tricuspid insufficiency) abnormalities. An autosomal recessive inheritance with variable expressivity was suspected. There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:1101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anophthalmia-megalocornea-cardiopathy-skeletal anomalies syndrome","secondary_identifiers":["UMLS:C4304035","MEDGEN:929704","GARD:717","SCTID:720495005"],"synonyms":[{"name":"Cassia Stocco dos Santos syndrome","type":"exact"},{"name":"anophthalmia megalocornea cardiopathy skeletal anomalies","type":"exact"}],"termid":"MONDO:0015230","xrefs":{"Monarch":{"xref_id":"0015230"}}}


id: PBO:0061964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AD member 1 pseudogene","termid":"PBO:0061964"}


id: PBO:0005189
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds 5'-TA[AG]GCAGNTN[CT]AACG[AC]G-3'","termid":"PBO:0005189"}


id: PR:P87154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase epsilon catalytic subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10670:SF0","PRO:DNx","OMA:SCHPO03630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon catalytic subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.13c","secondary_identifiers":["UniProtKB:P87154"],"synonyms":[{"name":"DNA polymerase II subunit A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLE","type":"exact"}],"termid":"PR:P87154"}


id: GO:1900272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of long-term synaptic potentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of long-term synaptic potentiation","termid":"GO:1900271"},{"relation_name":"negatively_regulates","term_name":"long-term synaptic potentiation","termid":"GO:0060291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of long-term synaptic potentiation","synonyms":[{"name":"down regulation of LTP","type":"related"},{"name":"down regulation of long-term potentiation","type":"broad"},{"name":"down regulation of long-term synaptic potentiation","type":"exact"},{"name":"down-regulation of LTP","type":"related"},{"name":"down-regulation of long-term potentiation","type":"broad"},{"name":"down-regulation of long-term synaptic potentiation","type":"exact"},{"name":"downregulation of LTP","type":"related"},{"name":"downregulation of long-term potentiation","type":"broad"},{"name":"downregulation of long-term synaptic potentiation","type":"exact"},{"name":"inhibition of LTP","type":"related"},{"name":"inhibition of long-term potentiation","type":"broad"},{"name":"inhibition of long-term synaptic potentiation","type":"narrow"},{"name":"negative regulation of LTP","type":"related"},{"name":"negative regulation of long-term potentiation","type":"broad"}],"termid":"GO:1900272"}


id: GO:0033912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (2->6)-beta-D-fructofuranan, to remove successive disaccharide residues as levanbiose, i.e. 6-(beta-D-fructofuranosyl)-D-fructose, from the end of the chain.","definition_xrefs":["EC:3.2.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"2,6-beta-fructan 6-levanbiohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.64-RXN"],"synonyms":[{"name":"2,6-beta-D-fructan 6-beta-D-fructofuranosylfructohydrolase activity","type":"related"},{"name":"2,6-beta-D-fructan 6-levanbiohydrolase activity","type":"related"},{"name":"2,6-beta-D-fructofuranan 6-(beta-D-fructosyl)-D-fructose-hydrolase activity","type":"related"},{"name":"beta-2,6-fructan-6-levanbiohydrolase activity","type":"related"},{"name":"levanbiose-producing levanase activity","type":"related"}],"termid":"GO:0033912"}


id: PBO:0082774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SSU; required for pre-18S rRNA processing, biogenesis of the small ribosomal subunit; interacts with U3 snoRNA, Mpp10p and Bfr2p; contains WD repeats, and has homology to Spb1p","termid":"PBO:0082774"}


id: PBO:0059673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 39","termid":"PBO:0059673"}


id: GO:0001990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hormones modulate the force with which blood passes through the circulatory system. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["GOC:mtg_cardio","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"},{"relation_name":"is_a","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by hormone","synonyms":[{"name":"blood pressure regulation by hormone","type":"exact"},{"name":"hormonal control of blood pressure","type":"related"},{"name":"hormonal regulation of blood pressure","type":"exact"}],"termid":"GO:0001990"}


id: GO:0031326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular biosynthetic process (obsolete GO:0031326)","synonyms":[{"name":"regulation of cellular anabolism","type":"exact"},{"name":"regulation of cellular biosynthesis","type":"exact"},{"name":"regulation of cellular formation","type":"exact"},{"name":"regulation of cellular synthesis","type":"exact"}],"termid":"GO:0031326"}


id: PBO:0067805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 107","termid":"PBO:0067805"}


id: PBO:0066352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 1","termid":"PBO:0066352"}


id: PBO:0076936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking from ER to golgi regulator","termid":"PBO:0076936"}


id: PBO:0086337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudogenic fragment with similarity to flocculins; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YHR212W-A has a paralog, YAR061W, that arose from a segmental duplication","termid":"PBO:0086337"}


id: MONDO:0956983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anaplastic pleomorphic xanthoastrocytoma that has material basis in BRAF mutations.","definition_xrefs":["DOID:0080881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaplastic pleomorphic xanthoastrocytoma","termid":"MONDO:0850312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleomorphic xanthoastrocytoma BRAF mutant","termid":"MONDO:0956983","xrefs":{"Monarch":{"xref_id":"0956983"}}}


id: MONDO:0011579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Late-onset retinal degeneration is an inherited retinal dystrophy characterized by delayed dark adaptation and nyctalopia and drusen deposits presenting in adulthood, followed by cone and rod degeneration that presents in the sixth decade of life, which leads to central vision loss. Anterior segment features such as peripupillary iris transillumination defects and abnormally long anterior zonular insertions are also observed. Choroidal neovascularization and glaucoma may occur in the late stages of the disease.","definition_xrefs":["Orphanet:67042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"late-onset retinal degeneration","secondary_identifiers":["DOID:0060869","MESH:C565309","GARD:4357","UMLS:C1854065","OMIM:605670","MEDGEN:344198","SCTID:719431007"],"synonyms":[{"name":"LORD","type":"exact"},{"name":"autosomal dominant late-onset retinal degeneration","type":"exact"},{"name":"late-onset retinal degeneration","type":"exact"},{"name":"pigmentary retinopathy","type":"related"},{"name":"retinal Degeneration, late-onset, autosomal dominant","type":"related"}],"termid":"MONDO:0011579","xrefs":{"Monarch":{"xref_id":"0011579"}}}


id: GO:0016239
data:
  {"annotated_genes":["SJAG_04496","SJAG_01716","SJAG_03851","SJAG_02433","SJAG_04435","SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75097,106060],"is_not":false,"summary":null,"term":"GO:0016239"},{"annotations":[108451,108361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[97420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[89309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process, such as recognition of nutrient depletion, that activates or increases the rate of macroautophagy to bring cytosolic macromolecules to the vacuole/lysosome for degradation.","definition_xrefs":["GOC:go_curators","PMID:9412464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of autophagy","termid":"GO:0010508"},{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"positively_regulates","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01716":null,"SJAG_02433":null,"SJAG_03851":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of macroautophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of macroautophagy","type":"narrow"},{"name":"positive regulation of starvation-induced autophagy","type":"exact"},{"name":"stimulation of macroautophagy","type":"narrow"},{"name":"up regulation of macroautophagy","type":"exact"},{"name":"up-regulation of macroautophagy","type":"exact"},{"name":"upregulation of macroautophagy","type":"exact"}],"termid":"GO:0016239","terms_by_termid":{"GO:0016239":null,"GO:0140501":null,"GO:1901098":null,"GO:2000786":null}}


id: GO:0052752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced coenzyme F420 + CoB-S-S-CoM = coenzyme F420 + CoM-SH + CoB-SH.","definition_xrefs":["GOC:mengo_curators","PMID:9914308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"reduced coenzyme F420:heterodisulfide oxidoreductase activity","synonyms":[{"name":"F420-dependent heterodisulfide oxidoreductase activity","type":"exact"},{"name":"F420H2:heterodisulfide oxidoreductase activity","type":"exact"},{"name":"coenzyme F420-dependent heterodisulfide oxidoreductase activity","type":"exact"}],"termid":"GO:0052752"}


id: MONDO:0018539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare epithelial tumor of small intestine (obsolete MONDO:0018539)","secondary_identifiers":["Orphanet:425368"],"synonyms":[{"name":"rare epithelial tumor of small bowel","type":"exact"}],"termid":"MONDO:0018539","xrefs":{"Monarch":{"xref_id":"0018539"}}}


id: PR:P48009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septin-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.11c","secondary_identifiers":["UniProtKB:P48009"],"synonyms":[{"name":"SPAC9G1.11c","type":"related"},{"name":"Spom972h-SEPT4","type":"exact"}],"termid":"PR:P48009"}


id: MONDO:0006689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete carcinoid syndrome (obsolete MONDO:0006689)","secondary_identifiers":["NANDO:2200396"],"termid":"MONDO:0006689","xrefs":{"Monarch":{"xref_id":"0006689"}}}


id: PBO:0056796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional ROCO family signaling regulator 1","termid":"PBO:0056796"}


id: GO:0031745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cysteinyl leukotriene receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cysteinyl leukotriene receptor binding","synonyms":[{"name":"cysteinyl leukotriene receptor ligand","type":"narrow"}],"termid":"GO:0031745"}


id: GO:1904080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in neuron fate specification.","definition_xrefs":["PMID:11959845","GO_REF:0000060","GOC:TermGenie","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in neuron fate specification (obsolete GO:1904080)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in neuron fate specification","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in neuron fate specification","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global involved in neuron fate specification","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in neuron fate specification","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in neuron fate specification","type":"exact"}],"termid":"GO:1904080"}


id: GO:0070651
data:
  {"annotated_genes":["SJAG_04153","SJAG_04084","SJAG_03745","SJAG_04006","SJAG_04818","SJAG_01818","SJAG_04283","SJAG_03507","SJAG_04321","SJAG_01521","SJAG_01191","SJAG_04824","SJAG_03728","SJAG_03179","SJAG_00854"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74317,92039,92872,95705,97040,97294,101878,104196,105061,106263,107250,107341,115235,115676,118095],"is_not":false,"summary":null,"term":"GO:0070651"}]},"cv_name":"biological_process","definition":"An rRNA catabolic process that results in the targeted detection and degradation of aberrant rRNAs contained within translationally defective ribosomes, thereby acting as a quality-control system.","definition_xrefs":["GOC:rn","PMID:17188037","GOC:mah","PMID:19390089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA catabolic process","termid":"GO:0016075"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03507":null,"SJAG_03728":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04283":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonfunctional rRNA decay","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NRD","type":"related"}],"termid":"GO:0070651","terms_by_termid":{"GO:0070651":null}}


id: MONDO:0023642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular motility disease","termid":"MONDO:0001584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weber syndrome","secondary_identifiers":["UMLS:C0455717","GARD:8676","ICD9:344.89","SCTID:24654003","icd11.foundation:1609214113","MEDGEN:96812"],"synonyms":[{"name":"Midbrain stroke syndromes","type":"related"},{"name":"Weber Syndrome","type":"related"},{"name":"Weber-Gubler syndrome","type":"exact"}],"termid":"MONDO:0023642","xrefs":{"Monarch":{"xref_id":"0023642"}}}


id: MONDO:0016458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The newly described 8q12 microduplication syndrome is associated with unusual and characteristic multi-organ clinical features, which include hearing loss, congenital heart defects, intellectual disability, hypotonia in infancy, and Duane anomaly.","definition_xrefs":["Orphanet:228399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 8","termid":"MONDO:0016959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8q12 microduplication syndrome","secondary_identifiers":["MEDGEN:930173","UMLS:C4304504","GARD:12816","SCTID:719684000"],"synonyms":[{"name":"chromosome 8q12 microduplication syndrome","type":"related"},{"name":"dup(8)(q12)","type":"exact"},{"name":"trisomy 8q12","type":"exact"}],"termid":"MONDO:0016458","xrefs":{"Monarch":{"xref_id":"0016458"}}}


id: FYPO:0000223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer, and has a greater length:diameter ratio, than normal, and has more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0005447","FYPO:0001985","FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"elongated multiseptate vegetative cell","synonyms":[{"name":"elongated multiseptate cell during mitotic cell cycle","type":"related"},{"name":"elongated multiseptate cells during vegetative growth","type":"exact"},{"name":"long multiseptate cells","type":"exact"}],"termid":"FYPO:0000223"}


id: GO:0043726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-6-(5-phospho-D-ribitylamino)uracil + H2O = 5-amino-6-(D-ribitylamino)uracil + phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"5-amino-6-(5-phosphoribitylamino)uracil phosphatase activity","secondary_identifiers":["RHEA:25197","EC:3.1.3.104","GO:0019173","MetaCyc:RIBOPHOSPHAT-RXN"],"synonyms":[{"name":"pyrimidine phosphatase activity","type":"exact"}],"termid":"GO:0043726"}


id: GO:0005979
data:
  {"annotated_genes":["SJAG_00963","SJAG_01376"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78687,76983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucan biosynthetic process","termid":"GO:0010962"},{"relation_name":"is_a","term_name":"regulation of glycogen metabolic process","termid":"GO:0070873"},{"relation_name":"regulates","term_name":"glycogen biosynthetic process","termid":"GO:0005978"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00963":null,"SJAG_01376":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of glycogen biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of glycogen anabolism","type":"exact"},{"name":"regulation of glycogen biosynthesis","type":"exact"},{"name":"regulation of glycogen formation","type":"exact"},{"name":"regulation of glycogen synthesis","type":"exact"}],"termid":"GO:0005979","terms_by_termid":{"GO:0045719":null}}


id: MOD:00012
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-asparagine.","definition_xrefs":["PubMed:5681232","ChEBI:29956","PubMed:6692818","PubMed:9789001","DeltaMass:0","RESID:AA0003","PubMed:15736973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine residue","synonyms":[{"name":"(2S)-2-amino-4-butanediamic acid","type":"exact"},{"name":"2,4-bis(azanyl)-4-oxobutanoic acid","type":"exact"},{"name":"2,4-diamino-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-3-carbamoylpropanoic acid","type":"exact"},{"name":"2-amino-4-butanediamic acid","type":"exact"},{"name":"2-aminosuccinamic acid","type":"exact"},{"name":"2-aminosuccinic acid 4-amide","type":"exact"},{"name":"Asn","type":"exact"},{"name":"L-asparagine","type":"exact"},{"name":"alpha-amino-beta-carbamylpropionic acid","type":"exact"},{"name":"alpha-aminosuccinamic acid","type":"exact"},{"name":"aspartic acid 4-amide","type":"exact"},{"name":"aspartic acid beta-amide","type":"exact"},{"name":"beta-asparagine","type":"exact"}],"termid":"MOD:00012"}


id: FYPO:0005981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the termination of RNA transcription RNA polymerase I from a DNA template is abnormal.","definition_xrefs":["GO:0006363","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase I transcription","synonyms":[{"name":"abnormal RNA polymerase I transcription termination","type":"exact"},{"name":"abnormal termination of RNA polymerase I transcription during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase I transcription during vegetative growth","type":"exact"},{"name":"abnormal transcription termination from Pol I promoter","type":"exact"},{"name":"abnormal transcription termination from RNA polymerase I promoter","type":"exact"}],"termid":"FYPO:0005981"}


id: PBO:0055718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leishmanolysin like peptidase","termid":"PBO:0055718"}


id: PBO:0080944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger B-box domain containing","termid":"PBO:0080944"}


id: GO:0140752
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id: PBO:0054408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1804","termid":"PBO:0054408"}


id: SO:0002164
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 5th residue (a lysine), from the start of the H2B histone protein is acetylated.","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2B_acetylation_site","termid":"SO:0002143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2BK5_acetylation_site","synonyms":[{"name":"H2BK5 acetylation site","type":"exact"},{"name":"H2BK5ac","type":"exact"}],"termid":"SO:0002164"}


id: PR:P49373
data:
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id: GO:0030983
data:
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id: GO:1905331
data:
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id: PBO:0050997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 140","termid":"PBO:0050997"}


id: FYPO:0000139
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id: PBO:0051814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF1R antisense imprinted non-protein coding RNA","termid":"PBO:0051814"}


id: MONDO:0020611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--kell system (obsolete MONDO:0020611)","secondary_identifiers":["OMIM:110900"],"synonyms":[{"name":"BLOOD GROUP--KELL SYSTEM","type":"related"},{"name":"Blood Group--Kell-Cellano System","type":"related"},{"name":"K(0)","type":"related"},{"name":"KEL","type":"related"},{"name":"Kell-Null","type":"related"},{"name":"Ko","type":"related"},{"name":"blood group, Kell","type":"exact"}],"termid":"MONDO:0020611","xrefs":{"Monarch":{"xref_id":"0020611"}}}


id: MONDO:0014110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the MIP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 15 multiple types","secondary_identifiers":["MEDGEN:815331","OMIM:615274","UMLS:C3809001","DOID:0110251"],"synonyms":[{"name":"CTRCT15","type":"exact"},{"name":"MIP early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 15, multiple types","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in MIP","type":"exact"}],"termid":"MONDO:0014110","xrefs":{"Monarch":{"xref_id":"0014110"}}}


id: MONDO:0019094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital Epstein-Barr virus (EBV) infection causes no clinical manifestations in the majority of infants. Indeed, the occurrence of congenital infection with EBV has never been demonstrated conclusively and must be very rare. One case have been reported to present after birth, multiple congenital anomalies (micrognathia, cryptorchidism, central cataracts), dystrophy, generalized hypotonia, hepatosplenomegaly, diffuse petechiae and hematomas and multiple areas of metaphysitis of the long bones at birth. A low birth weight was also reported. No specific follow-up of the fetus is recommended following maternal EBV primary-infection.","definition_xrefs":["Orphanet:70596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital Epstein-Barr virus infection","secondary_identifiers":["SCTID:716660007","GARD:18903","UMLS:C4274357","icd11.foundation:1861788994","MEDGEN:908580"],"synonyms":[{"name":"antenatal EBV infection","type":"exact"},{"name":"antenatal Epstein-Barr virus infection","type":"exact"},{"name":"congenital EBV infection","type":"exact"},{"name":"mother-to-child transmission of Epstein-Barr virus infection","type":"exact"}],"termid":"MONDO:0019094","xrefs":{"Monarch":{"xref_id":"0019094"}}}


id: MONDO:0014709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Heimler syndrome 2 (obsolete MONDO:0014709)","secondary_identifiers":["OMIM:616617","DOID:0080624"],"synonyms":[{"name":"HEIMLER syndrome 2","type":"related"},{"name":"HMLR2","type":"related"},{"name":"Heimler syndrome 2","type":"exact"},{"name":"Heimler syndrome type 2","type":"exact"},{"name":"peroxisome biogenesis disorder 4C","type":"related"}],"termid":"MONDO:0014709","xrefs":{"Monarch":{"xref_id":"0014709"}}}


id: PBO:0052566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 3","termid":"PBO:0052566"}


id: MONDO:0014477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the KCNB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 26","secondary_identifiers":["MEDGEN:863556","GARD:12391","DOID:0080461","UMLS:C4015119","OMIM:616056"],"synonyms":[{"name":"DEE26","type":"exact"},{"name":"EIEE26","type":"exact"},{"name":"KCNB1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 26","type":"exact"},{"name":"early infantile epileptic encephalopathy 26","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in KCNB1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 26","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 26","type":"exact"}],"termid":"MONDO:0014477","xrefs":{"Monarch":{"xref_id":"0014477"}}}


id: PBO:0054480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1880","termid":"PBO:0054480"}


id: PATO:0000575
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000575 absolute mass value (obsolete PATO:0000575)","termid":"PATO:0000575"}


id: PBO:0058340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4713 host gene","termid":"PBO:0058340"}


id: GO:0015195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-threonine from one side of a membrane to the other. L-threonine is (2R*,3S*)-2-amino-3-hydroxybutanoic acid.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-threonine transmembrane transporter activity","secondary_identifiers":["GO:0015512"],"synonyms":[{"name":"L-threonine permease activity","type":"related"},{"name":"L-threonine transporter activity","type":"broad"},{"name":"threonine/serine:sodium symporter activity","type":"related"}],"termid":"GO:0015195"}


id: GO:1901263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sorocarp spore cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of sorocarp spore cell differentiation","termid":"GO:1901261"},{"relation_name":"positively_regulates","term_name":"sorocarp spore cell differentiation","termid":"GO:0044671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sorocarp spore cell differentiation","synonyms":[{"name":"activation of sorocarp spore cell differentiation","type":"narrow"},{"name":"up regulation of sorocarp spore cell differentiation","type":"exact"},{"name":"up-regulation of sorocarp spore cell differentiation","type":"exact"},{"name":"upregulation of sorocarp spore cell differentiation","type":"exact"}],"termid":"GO:1901263"}


id: PBO:0040816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICRA antisense RNA 1","termid":"PBO:0040816"}


id: GO:0016059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of restoring the photoreceptor cell to its unexcited state after termination of the stimulus (photon).","definition_xrefs":["PMID:8316831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of opsin-mediated signaling pathway","termid":"GO:0022400"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled opsin signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of opsin-mediated signaling pathway","synonyms":[{"name":"deactivation of opsin mediated signaling","type":"narrow"},{"name":"deactivation of rhodopsin mediated signalling","type":"narrow"},{"name":"negative regulation of rhodopsin-mediated signaling pathway","type":"narrow"},{"name":"rod response recovery","type":"broad"}],"termid":"GO:0016059"}


id: PATO:0001340
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hermaphrodite","synonyms":[{"name":"intersex","type":"exact"}],"termid":"PATO:0001340"}


id: PBO:0083856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATP synthase subunit c (ATPase-associated proteolipid); encoded on the mitochondrial genome; mutation confers oligomycin resistance; expression is specifically dependent on the nuclear genes AEP1 and AEP2","termid":"PBO:0083856"}


id: PBO:0004065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR33","termid":"PBO:0004065"}


id: PBO:0086651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole and is induced in response to the DNA-damaging agent MMS; gene expression increases in response to Zymoliase treatment","termid":"PBO:0086651"}


id: PBO:0004564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein Sog2 (predicted)","termid":"PBO:0004564"}


id: PBO:0091516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi1","termid":"PBO:0091516"}


id: PR:O74860
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18.10 gene.","definition_xrefs":["UniProtKB:O74860","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal kinase C18.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.10","synonyms":[{"name":"Spom972h-SPCC18.10","type":"exact"}],"termid":"PR:O74860"}


id: MONDO:0011396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse palmoplantar keratoderma, characterized by honeycomb palmoplantar hyperkeratosis associated with pseudoainhum of the fifth digit of the hand, ichthyosis and deafness. Keratoderma hereditarium mutilans with ichthyosis follows an autosomal dominant mode of transmission.","definition_xrefs":["Orphanet:79395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"loricrin keratoderma","secondary_identifiers":["OMIM:604117","SCTID:717183001","UMLS:C1858805","MEDGEN:395099","GARD:16719","MESH:C565826"],"synonyms":[{"name":"Camisa disease","type":"exact"},{"name":"Vohwinkel syndrome with ichthyosis","type":"exact"},{"name":"Vohwinkel syndrome, variant form","type":"related"},{"name":"keratoderma hereditarium mutilans with ichthyosis","type":"exact"},{"name":"keratoderma-ichthyosiform dermatosis-elevated beta-glucuronidase syndrome","type":"exact"},{"name":"loricrin keratoderma","type":"exact"},{"name":"mutilating keratoderma with ichthyosis","type":"related"}],"termid":"MONDO:0011396","xrefs":{"Monarch":{"xref_id":"0011396"}}}


id: PBO:0039801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis resistant E3 ubiquitin protein ligase 1","termid":"PBO:0039801"}


id: PBO:0084651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor isoform of pyruvate decarboxylase; decarboxylates pyruvate to acetaldehyde, involved in amino acid catabolism; transcription is glucose- and ethanol-dependent, and is strongly induced during sulfur limitation","termid":"PBO:0084651"}


id: FYPO:0009052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing glutamate as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"increased cell population growth on glutamate nitrogen source","synonyms":[{"name":"increased growth on glutamate nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on glutamate nitrogen source","type":"exact"}],"termid":"FYPO:0009052"}


id: GO:2000613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thyroid-stimulating hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"is_a","term_name":"regulation of thyroid-stimulating hormone secretion","termid":"GO:2000612"},{"relation_name":"negatively_regulates","term_name":"thyroid-stimulating hormone secretion","termid":"GO:0070460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of thyroid-stimulating hormone secretion","synonyms":[{"name":"negative regulation of TSH secretion","type":"exact"},{"name":"negative regulation of thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:2000613"}


id: PBO:0055823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRAT domain containing 1","termid":"PBO:0055823"}


id: PR:O14100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zds1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein zds1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31F12.01","synonyms":[{"name":"Spom972h-zds1","type":"exact"},{"name":"meiotically up-regulated gene 88 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14100"}


id: MONDO:0017772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"oral erosive lichen","secondary_identifiers":["Orphanet:31142"],"termid":"MONDO:0017772","xrefs":{"Monarch":{"xref_id":"0017772"}}}


id: MONDO:1012595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in cats due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, domestic cat","secondary_identifiers":["OMIA:000202-9685"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Felis catus (domestic cat)","type":"exact"}],"termid":"MONDO:1012595","xrefs":{"Monarch":{"xref_id":"1012595"}}}


id: SO:0001529
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the endosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"endosomal_localization_signal","synonyms":[{"name":"endosomal localization signal","type":"exact"}],"termid":"SO:0001529"}


id: PBO:0062123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 1","termid":"PBO:0062123"}


id: PBO:0062663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily E member 1 pseudogene","termid":"PBO:0062663"}


id: GO:0010842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the vertebrate retina is organized into three laminae: the outer nuclear layer (ONL), which contains photoreceptor nuclei; the inner nuclear layer (INL), which contains amacrine, bipolar and horizontal cells; and the retinal ganglion cell (RGC) layer. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells. The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells. Spanning all layers of the retina are the radially oriented Mueller glia.","definition_xrefs":["GOC:ascb_2009","PMID:1270266","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina layer formation","synonyms":[{"name":"retinal lamination","type":"exact"},{"name":"retinal layer formation","type":"exact"}],"termid":"GO:0010842"}


id: PBO:0055207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2632","termid":"PBO:0055207"}


id: PBO:0079600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2E3 divergent transcript","termid":"PBO:0079600"}


id: MONDO:0030796
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030634"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy, hereditary diffuse, with spheroids","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:221820","MEDGEN:777989","UMLS:C3711381"],"termid":"MONDO:0030796","terms_by_termid":{"MONDO:0030634":null},"xrefs":{"Monarch":{"xref_id":"0030796"}}}


id: GO:0052884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + all-trans-retinyl palmitate = 11-cis-retinol + H+ + palmitate.","definition_xrefs":["RHEA:31775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinyl-palmitate esterase activity","termid":"GO:0050253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming activity","secondary_identifiers":["Reactome:R-HSA-2453833"],"synonyms":[{"name":"all-trans-retinol isomerase:hydrolase activity","type":"broad"},{"name":"all-trans-retinyl-palmitate hydrolase activity","type":"broad"},{"name":"retinoid isomerohydrolase activity","type":"broad"},{"name":"retinol isomerase activity","type":"broad"}],"termid":"GO:0052884"}


id: GO:1905554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of blood vessel branching.","definition_xrefs":["GOC:BHF","PMID:23201774","GOC:BHF_telomere","GO_REF:0000058","GOC:nc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of angiogenesis","termid":"GO:0016525"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"is_a","term_name":"regulation of blood vessel branching","termid":"GO:1905553"},{"relation_name":"negatively_regulates","term_name":"branching involved in blood vessel morphogenesis","termid":"GO:0001569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel branching","synonyms":[{"name":"down regulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"down regulation of patterning of blood vessels","type":"exact"},{"name":"down-regulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"down-regulation of patterning of blood vessels","type":"exact"},{"name":"downregulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"downregulation of patterning of blood vessels","type":"exact"},{"name":"inhibition of branching involved in blood vessel morphogenesis","type":"narrow"},{"name":"inhibition of patterning of blood vessels","type":"narrow"},{"name":"negative regulation of branching involved in blood vessel morphogenesis","type":"exact"}],"termid":"GO:1905554"}


id: PBO:0040509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin induced 1","termid":"PBO:0040509"}


id: PBO:0113279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; involved in the excretion of excess amino acids; member of the 12-spanner drug:H(+) antiporter DHA1 family; confers resistance to short-chain monocarboxylic acids and quinidine; relocalizes from plasma membrane to cytoplasm upon DNA replication stress; AQR1 has a paralog, QDR1, that arose from the whole genome duplication","termid":"PBO:0113279"}


id: PBO:0083003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Amino acid N-acetyltransferase that detoxifies D-amino acids; catalyzes N-acetylation of D-amino acids through ordered bi-bi mechanism in which acetyl-CoA is first substrate bound and CoA is last product liberated; acetylates histones and polyamines, also autoacetylates","termid":"PBO:0083003"}


id: GO:0060539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the diaphragm over time from its initial formation to the mature structure. The diaphragm is a skeletal muscle that is responsible for contraction and expansion of the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle organ development","termid":"GO:0060538"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diaphragm development","termid":"GO:0060539"}


id: GO:0160232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing Integrator and protein phosphatase 2A core enzyme (PP2A-AC) that stably associates with the C-terminus of RNA polymerase II and promotes premature RNA polymerase II transcription termination.","definition_xrefs":["PMID:33243860","PMID:38570683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"INTAC complex","synonyms":[{"name":"integrator-PP2A complex","type":"exact"}],"termid":"GO:0160232"}


id: GO:0043519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly, arrangement of constituent parts, or disassembly of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"regulation of myosin II filament organization","synonyms":[{"name":"regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"regulation of myosin II filament organisation","type":"exact"}],"termid":"GO:0043519"}


id: GO:0030644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of chloride ions within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic anion homeostasis","termid":"GO:0030002"},{"relation_name":"is_a","term_name":"chloride ion homeostasis","termid":"GO:0055064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular chloride ion homeostasis","synonyms":[{"name":"cellular chloride ion homeostasis","type":"exact"}],"termid":"GO:0030644"}


id: MONDO:0007371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornea guttata with anterior polar cataracts","secondary_identifiers":["UMLS:C1852558","OMIM:121390","MEDGEN:338956","MESH:C535471"],"synonyms":[{"name":"cornea guttata with anterior polar cataract","type":"related"},{"name":"cornea guttata with anterior polar cataracts","type":"exact"},{"name":"familial congenital cornea guttata with anterior polar cataracts (type)","type":"related"}],"termid":"MONDO:0007371","xrefs":{"Monarch":{"xref_id":"0007371"}}}


id: MONDO:0030922
data:
  {"annotated_genes":["SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84895],"is_not":false,"summary":null,"term":"MONDO:0030922"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 56","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617854","MEDGEN:1638835","UMLS:C4693389","DOID:0080226","GARD:13524"],"synonyms":[{"name":"CLTC-related ID","type":"exact"},{"name":"CLTC-related disorder","type":"exact"},{"name":"CLTC-related intellectual disability","type":"exact"},{"name":"MRD56","type":"related"},{"name":"autosomal dominant intellectual disability 56","type":"related"},{"name":"autosomal dominant mental retardation 56","type":"related"},{"name":"intellectual disability, autosomal dominant 56","type":"exact"},{"name":"mental retardation, autosomal dominant 56","type":"related"}],"termid":"MONDO:0030922","terms_by_termid":{"MONDO:0030922":null},"xrefs":{"Monarch":{"xref_id":"0030922"}}}


id: PBO:0077297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM38B pseudogene 1","termid":"PBO:0077297"}


id: PR:P06652
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-phase inducer phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:9774107","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-phase inducer phosphatase","termid":"PR:000027506"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase inducer phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.05","secondary_identifiers":["PR:000027507","UniProtKB:P06652"],"synonyms":[{"name":"SPAC24H6.05","type":"related"},{"name":"Spom972h-cdc25","type":"exact"}],"termid":"PR:P06652"}


id: PBO:0045179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB1 pseudogene 1","termid":"PBO:0045179"}


id: GO:1903791
data:
  {"annotated_genes":["SJAG_03970","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87880],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[95329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The process in which uracil is transported across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:8948441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uracil transport","termid":"GO:0015857"},{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transport","termid":"GO:1904082"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"uracil transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903791","terms_by_termid":{"GO:0098721":null,"GO:1905530":null}}


id: PBO:0060909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurogenin 3","termid":"PBO:0060909"}


id: MONDO:0002736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma with glandular differentiation arising from the ampulla of Vater. Morphologically, it is characterized by the presence of mucoid stroma formation.","definition_xrefs":["NCIT:C27416"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"extrahepatic bile duct mucinous adenocarcinoma","termid":"MONDO:0002739"},{"relation_name":"is_a","term_name":"ampulla of vater adenocarcinoma","termid":"MONDO:0002670"},{"relation_name":"is_a","term_name":"extrahepatic bile duct mucinous adenocarcinoma","termid":"MONDO:0002739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"ampulla of vater mucinous adenocarcinoma","secondary_identifiers":["UMLS:C1332248","MEDGEN:233973","DOID:3693"],"synonyms":[{"name":"ampulla of Vater mucinous adenocarcinoma","type":"exact"},{"name":"hepatopancreatic ampulla mucinous adenocarcinoma","type":"exact"}],"termid":"MONDO:0002736","xrefs":{"Monarch":{"xref_id":"0002736"}}}


id: PBO:0004650
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile cerebral and cerebellar atrophy","termid":"PBO:0004650"}


id: FYPO:0000747
data:
  {"alleles_by_uniquename":{"SJAG_01081:allele-1":{"allele_type":"nonsense_mutation","description":"S427>stop","gene_uniquename":"SJAG_01081","name":"ade6-domE","uniquename":"SJAG_01081:allele-1"},"SJAG_01081:allele-2":{"allele_type":"amino_acid_mutation","description":"Q262A","gene_uniquename":"SJAG_01081","name":"ade6-domK","uniquename":"SJAG_01081:allele-2"},"SJAG_01081:allele-3":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01081","name":"ade6delta","uniquename":"SJAG_01081:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119025,119026,119027,119373],"is_not":false,"summary":null,"term":"FYPO:0000747"}]},"cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize adenine, and therefore requires adenine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01081":null},"genotype_count":3,"genotypes_by_uniquename":{"ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type":{"display_name":"ade6-domE(S427>stop)","display_uniquename":"ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-1","expression":"Not assayed or wild type"}]}]},"ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ade6-domK(Q262A aa)","display_uniquename":"ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-2","expression":"Not assayed or wild type"}]}]},"ade6delta":{"display_name":"ade6delta","display_uniquename":"ade6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-3","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for adenine","references_by_uniquename":{"PMID:19330769":null,"PMID:21905090":null},"single_locus_annotated_genes":["SJAG_01081"],"single_locus_genotype_uniquenames":["ade6delta","ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type","ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"adenine auxotrophy","type":"exact"},{"name":"growth auxotrophic for adenine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for adenine during vegetative growth","type":"exact"}],"termid":"FYPO:0000747","terms_by_termid":{"FYPO:0000747":null}}


id: PBO:0075734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 2","termid":"PBO:0075734"}


id: MONDO:1012718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy associated with β-sarcoglycan deficiency that occurs in cats.","definition_xrefs":["PMID:19203767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, domestic cat","termid":"MONDO:1010912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy with reduced β-sarcoglycan, domestic cat","secondary_identifiers":["OMIA:001620-9685"],"synonyms":[{"name":"LGMDR4","type":"exact"},{"name":"Muscular dystrophy, limb-girdle, type R4 (LGMDR4), cat","type":"related"},{"name":"sarcoglycan deficiency, cat","type":"related"}],"termid":"MONDO:1012718","xrefs":{"Monarch":{"xref_id":"1012718"}}}


id: GO:0042077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of peptidyl-serine through a phosphoester bond forming, for example, GlcNAc-alpha-1-P-Ser residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphate-linked glycosylation","termid":"GO:0042076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein phosphate-linked glycosylation via serine","synonyms":[{"name":"protein amino acid phosphate-linked glycosylation via serine","type":"exact"}],"termid":"GO:0042077"}


id: PBO:0086102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for actin organization and passage through Start; highly conserved nuclear protein; required for actin cytoskeleton organization; plays a critical role in G1 events; binds Nap1p; involved in 60S ribosome biogenesis","termid":"PBO:0086102"}


id: MONDO:0859139
data:
  {"annotated_genes":["SJAG_05313","SJAG_04755"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86379,86380],"is_not":false,"summary":null,"term":"MONDO:0859139"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"is_obsolete":false,"name":"blepharophimosis-impaired intellectual development syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1779966","DOID:0081442","OMIM:619293","UMLS:C5443984","Orphanet:637013"],"synonyms":[{"name":"SMARCA2-related blepharophimosis-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0859139","terms_by_termid":{"MONDO:0859139":null},"xrefs":{"Monarch":{"xref_id":"0859139"}}}


id: GO:1905599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of low-density lipoprotein receptor activity.","definition_xrefs":["GOC:nc","GOC:TermGenie","GOC:BHF","GO_REF:0000059","PMID:22848640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of low-density lipoprotein receptor activity","synonyms":[{"name":"activation of LDL receptor","type":"narrow"},{"name":"activation of LDLR activity","type":"narrow"},{"name":"activation of low-density lipoprotein receptor activity","type":"narrow"},{"name":"positive regulation of LDL receptor","type":"exact"},{"name":"positive regulation of LDLR activity","type":"exact"},{"name":"up regulation of LDL receptor","type":"exact"},{"name":"up regulation of LDLR activity","type":"exact"},{"name":"up regulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"up-regulation of LDL receptor","type":"exact"},{"name":"up-regulation of LDLR activity","type":"exact"},{"name":"up-regulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"upregulation of LDL receptor","type":"exact"},{"name":"upregulation of LDLR activity","type":"exact"},{"name":"upregulation of low-density lipoprotein receptor activity","type":"exact"}],"termid":"GO:1905599"}


