# terms

id: PBO:0080198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 6","termid":"PBO:0080198"}


id: MOD:00591
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15549660","Unimod:271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:00591"}


id: GO:0090577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase IV.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase IV transcription regulator complex","synonyms":[{"name":"RNA polymerase IV transcription factor complex","type":"narrow"}],"termid":"GO:0090577"}


id: PATO:0000509
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000509 stress sensitivity value (obsolete PATO:0000509)","termid":"PATO:0000509"}


id: PBO:0039326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 15-lipoxygenase","termid":"PBO:0039326"}


id: PBO:0074453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC related modular calcium binding 1","termid":"PBO:0074453"}


id: GO:0060333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interferon-gamma binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Interferon gamma is the only member of the type II interferon found so far.","definition_xrefs":["GOC:dph","GOC:add","GOC:signaling","PMID:28901902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon-mediated signaling pathway","termid":"GO:0140888"},{"relation_name":"part_of","term_name":"cellular response to type II interferon","termid":"GO:0071346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"type II interferon-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-877300"],"synonyms":[{"name":"gamma-interferon-mediated signaling pathway","type":"exact"},{"name":"immune interferon signaling pathway","type":"exact"},{"name":"interferon-gamma-mediated signaling pathway","type":"exact"},{"name":"interferon-gamma-mediated signalling pathway","type":"exact"},{"name":"type II IFN-mediated signaling pathway","type":"exact"}],"termid":"GO:0060333"}


id: PBO:0044865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 1C","termid":"PBO:0044865"}


id: PBO:0049643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 46","termid":"PBO:0049643"}


id: PBO:0044880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND6A antisense RNA 1","termid":"PBO:0044880"}


id: GO:0099612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to or maintained in a location within an axon.","definition_xrefs":["PMID:26157139","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to axon","termid":"GO:0099612"}


id: PBO:0064310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteolipid protein 2","termid":"PBO:0064310"}


id: GO:0016447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via germline recombination within a single locus","termid":"GO:0002562"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"somatic recombination of immunoglobulin gene segments","synonyms":[{"name":"somatic recombination of antibody gene segments","type":"exact"}],"termid":"GO:0016447"}


id: PBO:0075368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 6","termid":"PBO:0075368"}


id: PBO:0089033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Rieske ISP assembly ATPase Bcs1","termid":"PBO:0089033"}


id: GO:0001981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which the change in diameter of an artery is detected and converted to a molecular signal.","definition_xrefs":["GOC:mtg_cardio","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus","termid":"GO:0050982"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by carotid sinus baroreceptor feedback","termid":"GO:0001978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor detection of arterial stretch","termid":"GO:0001981"}


id: PBO:0091418
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ELOVL3","termid":"PBO:0091418"}


id: PBO:0074597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 9B","termid":"PBO:0074597"}


id: MONDO:0015929
data:
  {"annotated_genes":["SJAG_03847","SJAG_01065","SJAG_01370"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100104"},{"annotations":[85981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009670"},{"annotations":[86618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory or thoracic malformation","termid":"MONDO:0020001"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01065":null,"SJAG_01370":null,"SJAG_03847":null},"genotype_count":0,"is_obsolete":false,"name":"thoracic malformation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:182108","UMLS:C5680597","MEDGEN:1842414","GARD:20248","NANDO:2201008"],"termid":"MONDO:0015929","terms_by_termid":{"MONDO:0009670":null,"MONDO:0054565":null,"MONDO:0100104":null},"xrefs":{"Monarch":{"xref_id":"0015929"}}}


id: PR:P40376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pka1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.10","synonyms":[{"name":"Spom972h-pka1","type":"exact"}],"termid":"PR:P40376"}


id: MONDO:0017909
data:
  {"annotated_genes":["SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[86011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"}]},"cv_name":"mondo","definition":"Glutathione synthetase deficiency is characterized by hemolytic anemia, associated with metabolic acidosis and 5-oxoprolinuria in moderate forms, and with progressive neurological symptoms and recurrent bacterial infections in the most severe forms.","definition_xrefs":["Orphanet:32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defective phagocytic cell engulfment","termid":"MONDO:0024626"},{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019241"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005046","MONDO:0019241"],"is_obsolete":false,"name":"inherited glutathione synthetase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C128193","SCTID:234589002","MESH:C536835","DOID:0080699","GARD:10047"],"synonyms":[{"name":"5-oxoprolinuria","type":"exact"},{"name":"GSSD","type":"exact"},{"name":"glutathione synthetase deficiency","type":"exact"},{"name":"inborn error of glutathione synthase activity","type":"exact"},{"name":"inborn glutathione synthase activity disorder","type":"exact"},{"name":"inherited glutathione synthetase deficiency","type":"exact"},{"name":"oxoprolinase deficiency","type":"related"},{"name":"pyroglutamic aciduria","type":"exact"},{"name":"pyroglutamicaciduria","type":"exact"},{"name":"rare inborn error of glutathione synthase activity","type":"exact"}],"termid":"MONDO:0017909","terms_by_termid":{"MONDO:0009284":null,"MONDO:0009947":null},"xrefs":{"Monarch":{"xref_id":"0017909"}}}


id: MONDO:1012239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central retinal degeneration, non-human animal","termid":"MONDO:1011978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central retinal degeneration, cheetah","secondary_identifiers":["OMIA:000867-32536"],"termid":"MONDO:1012239","xrefs":{"Monarch":{"xref_id":"1012239"}}}


id: PBO:0063901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class X","termid":"PBO:0063901"}


id: PATO:0000986
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000986 absolute consistency (obsolete PATO:0000986)","termid":"PATO:0000986"}


id: PBO:0080885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yrdC N(6)-threonylcarbamoyltransferase domain containing pseudogene 1","termid":"PBO:0080885"}


id: MONDO:0009871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pili torti-developmental delay-neurological abnormalities syndrome is characterized by growth and developmental delay, mild to moderate neurologic abnormalities, and pili torti. It has been described in a brother and his sister born to consanguineous Puerto Rican parents.","definition_xrefs":["Orphanet:2891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pili torti-developmental delay-neurological abnormalities syndrome","secondary_identifiers":["MESH:C537398","OMIM:261990","MEDGEN:342358","GARD:4362","UMLS:C1849811"],"synonyms":[{"name":"abnormal hair, joint laxity, and developmental delay","type":"exact"},{"name":"pili torti and developmental delay","type":"related"},{"name":"pili torti developmental delay neurological abnormalities","type":"related"}],"termid":"MONDO:0009871","xrefs":{"Monarch":{"xref_id":"0009871"}}}


id: MONDO:0003764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from leptomeningeal melanocytes and occurs in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pediatric meningioma","termid":"MONDO:0003057"},{"relation_name":"is_a","term_name":"leptomeningeal melanoma","termid":"MONDO:0003761"},{"relation_name":"is_a","term_name":"childhood malignant melanoma","termid":"MONDO:0042494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric leptomeningeal melanoma","secondary_identifiers":["DOID:6089","UMLS:C1332976","MEDGEN:232061","NCIT:C5318"],"synonyms":[{"name":"childhood leptomeningeal melanoma","type":"exact"},{"name":"childhood meningeal melanoma","type":"exact"},{"name":"paediatric meningeal melanoma","type":"exact"},{"name":"pediatric meningeal melanoma","type":"exact"}],"termid":"MONDO:0003764","xrefs":{"Monarch":{"xref_id":"0003764"}}}


id: PBO:0077893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53RK binding protein pseudogene 2","termid":"PBO:0077893"}


id: MONDO:0800088
data:
  {"annotated_genes":["SJAG_05182","SJAG_04706","SJAG_04819","SJAG_04295","SJAG_05194","SJAG_05175","SJAG_02139","SJAG_01868"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85175,85179,85176,85177,85178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010027"},{"annotations":[85273,85274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009737"},{"annotations":[86632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015012"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01868":null,"SJAG_02139":null,"SJAG_04295":null,"SJAG_04706":null,"SJAG_04819":null,"SJAG_05175":null,"SJAG_05182":null,"SJAG_05194":null},"genotype_count":0,"is_obsolete":false,"name":"lysosomal storage disease with skeletal involvement","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:254069004","SCTID:279081001","ICD9:756.9","GARD:19203","Orphanet:93448"],"synonyms":[{"name":"dysostosis multiplex","type":"exact"}],"termid":"MONDO:0800088","terms_by_termid":{"MONDO:0009737":null,"MONDO:0010027":null,"MONDO:0015012":null},"xrefs":{"Monarch":{"xref_id":"0800088"}}}


id: GO:0016738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which reduced flavodoxin acts as a hydrogen or electron donor and reduces dinitrogen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on reduced flavodoxin as donor","termid":"GO:0016737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on reduced flavodoxin as donor, dinitrogen as acceptor","secondary_identifiers":["EC:1.19.6.-"],"termid":"GO:0016738"}


id: PBO:0085539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9A has a paralog, RPS9B, that arose from the whole genome duplication","termid":"PBO:0085539"}


id: PBO:0085332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol transfer protein (PITP); downregulates Plb1p-mediated turnover of phosphatidylcholine; forms a complex with Psd2p which appears essential for maintenance of vacuolar PE levels; found in the cytosol and microsomes; homologous to Pdr16p; deletion affects phospholipid composition","termid":"PBO:0085332"}


id: PBO:0076976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 7","termid":"PBO:0076976"}


id: PBO:0065734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX domain containing 1","termid":"PBO:0065734"}


id: MONDO:0040732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Pseudomonas infection","termid":"MONDO:0005141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudomonas aeruginosa infectious disease","secondary_identifiers":["MEDGEN:547066","SCTID:11218009","UMLS:C0276075"],"synonyms":[{"name":"infection caused by Pseudomonas aeruginosa","type":"related"},{"name":"infection due to Pseudomonas aeruginosa","type":"exact"}],"termid":"MONDO:0040732","xrefs":{"Monarch":{"xref_id":"0040732"}}}


id: FYPO:0000097
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119043,119055,119276,119412],"is_not":false,"summary":null,"term":"FYPO:0000097"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to caffeine. Cells stop growing (and may die) at a concentration of caffeine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02527":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":4,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to caffeine during vegetative growth","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527","SJAG_02592","SJAG_00266","SJAG_04312"],"single_locus_genotype_uniquenames":["sty1delta","pka1delta","atf1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"hypersensitive to caffeine during vegetative growth","type":"exact"},{"name":"sensitive to caffeine during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000097","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000097":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000003":null}}


id: MONDO:0011627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 5","secondary_identifiers":["OMIM:606053","UMLS:C1853755","MEDGEN:340048"],"synonyms":[{"name":"AUTS5","type":"exact"},{"name":"autism, susceptibility to, 5","type":"exact"},{"name":"autism-related speech delay","type":"related"},{"name":"intellectual developmental disorder with autism and speech delay","type":"exact"},{"name":"phrase speech delay, autism-related","type":"related"}],"termid":"MONDO:0011627","xrefs":{"Monarch":{"xref_id":"0011627"}}}


id: RO:0002006
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_synaptic_terminal_of","termid":"RO:0002006"}


id: PBO:0039322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALOX12 antisense RNA 1","termid":"PBO:0039322"}


id: PBO:0030415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_spindle_pole_body_duplication","termid":"PBO:0030415"}


id: GO:0016081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial (indirect) attachment of a synaptic vesicle membrane to the presynaptic active zone membrane, mediated by proteins protruding from the membrane and proteins of the presynaptic active zone cytoplasmic component. Synaptic vesicle tethering is the first step in this process.","definition_xrefs":["PMID:15217342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0140056","GO:0016192","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle docking","synonyms":[{"name":"synaptic vesicle docking during exocytosis","type":"related"},{"name":"synaptic vesicle docking involved in exocytosis","type":"exact"}],"termid":"GO:0016081"}


id: PBO:0013767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase ipp1 (predicted)","termid":"PBO:0013767"}


id: PBO:0061494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural retina leucine zipper","termid":"PBO:0061494"}


id: PBO:0027766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytosolic_calcium_level","termid":"PBO:0027766"}


id: PBO:0113332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified by fungal homology and RT-PCR;  localizes to cytosol and peroxisomes","termid":"PBO:0113332"}


id: GO:0102703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (-)-camphene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.117","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"camphene synthase activity","secondary_identifiers":["MetaCyc:RXN-5142","RHEA:25484"],"termid":"GO:0102703"}


id: GO:1900372
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of purine nucleotide biosynthetic processes.","definition_xrefs":["GOC:go_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide biosynthetic process","termid":"GO:0030809"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"negatively_regulates","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of purine nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of purine nucleotide anabolism","type":"exact"},{"name":"down regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"down regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"down regulation of purine nucleotide formation","type":"exact"},{"name":"down regulation of purine nucleotide synthesis","type":"exact"},{"name":"down-regulation of purine nucleotide anabolism","type":"exact"},{"name":"down-regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"down-regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of purine nucleotide formation","type":"exact"},{"name":"down-regulation of purine nucleotide synthesis","type":"exact"},{"name":"downregulation of purine nucleotide anabolism","type":"exact"},{"name":"downregulation of purine nucleotide biosynthesis","type":"exact"},{"name":"downregulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of purine nucleotide formation","type":"exact"},{"name":"downregulation of purine nucleotide synthesis","type":"exact"},{"name":"inhibition of purine nucleotide anabolism","type":"exact"},{"name":"inhibition of purine nucleotide biosynthesis","type":"exact"},{"name":"inhibition of purine nucleotide biosynthetic process","type":"narrow"},{"name":"inhibition of purine nucleotide formation","type":"exact"},{"name":"inhibition of purine nucleotide synthesis","type":"exact"},{"name":"negative regulation of purine nucleotide anabolism","type":"exact"},{"name":"negative regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of purine nucleotide formation","type":"exact"},{"name":"negative regulation of purine nucleotide synthesis","type":"exact"}],"termid":"GO:1900372","terms_by_termid":{"GO:1905707":null}}


id: PBO:0060153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 1 (pseudogene)","termid":"PBO:0060153"}


id: PBO:0073405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 8","termid":"PBO:0073405"}


id: PBO:0060962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFS1 cysteine desulfurase","termid":"PBO:0060962"}


id: PBO:0034043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-allelopath_of","termid":"PBO:0034043"}


id: PBO:0078830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon CGG) 1-1","termid":"PBO:0078830"}


id: PBO:0064390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 12","termid":"PBO:0064390"}


id: FYPO:0008066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is no longer arrested during G1 phase when phosphate is removed. Arrest may either occur under conditions where arrest is not a normal occurrence, or may progress differently from normal under conditions where arrest normally does take place.","definition_xrefs":["PMID:36779416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic G1 phase","termid":"FYPO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished cell cycle arrest in mitotic G1 phase in response to phosphate starvation","termid":"FYPO:0008066"}


id: FYPO:0005354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which site-specific DNA replication termination at the RTS1 barrier in the mating type region is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal site-specific DNA replication termination at RTS1 barrier","synonyms":[{"name":"normal site-specific DNA replication termination at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"normal site-specific DNA replication termination at RTS1 barrier during vegetative growth","type":"exact"}],"termid":"FYPO:0005354"}


id: PBO:0082050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' DNA helicase involved in error-free bypass of DNA lesions; binds flap DNA, stimulates activity of Rad27p and Dna2p; prevents crossovers between ectopic sequences by removing substrates for Mus81-Mms4 or Rad1-Rad10 cleavage; homolog of human FANCM Fanconi anemia protein that is involved in stabilizing and remodeling blocked replication forks; member of SF2 DExD/H superfamily of helicases; nonsense or missense mutations in FANCM can make people more likely to get cancer","termid":"PBO:0082050"}


id: MONDO:0019966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thoracic outlet syndrome (obsolete MONDO:0019966)","termid":"MONDO:0019966","xrefs":{"Monarch":{"xref_id":"0019966"}}}


id: MONDO:0015354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by a sensory and autonomic axonal neuropathy, sensorineural hearing loss and persistent global developmental delay.","definition_xrefs":["Orphanet:139573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy with deafness and global delay","secondary_identifiers":["SCTID:717826009","UMLS:C4303566","MEDGEN:929235","GARD:19920"],"synonyms":[{"name":"HSAN with deafness and global delay","type":"exact"}],"termid":"MONDO:0015354","xrefs":{"Monarch":{"xref_id":"0015354"}}}


id: _global:directly_positively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulated_by","termid":"_global:directly_regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulated_by","secondary_identifiers":["RO:0002024"],"termid":"_global:directly_positively_regulated_by"}


id: PBO:0029033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubule_bundles_present_in_decreased_numbers","termid":"PBO:0029033"}


id: FYPO:0003301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ubiquitin-dependent protein degradation via the N-end rule pathway begins later than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein degradation during meiosis","termid":"FYPO:0006531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of protein degradation via N-end rule pathway during meiosis","synonyms":[{"name":"delayed onset of protein degradation via N-end rule pathway during meiotic nuclear division","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein breakdown via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein catabolic process via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein catabolism via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein degradation via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed protein degradation via N-end rule pathway during meiosis","type":"exact"}],"termid":"FYPO:0003301"}


id: GO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by polyamination.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein polyamination","synonyms":[{"name":"protein amino acid polyamination","type":"exact"}],"termid":"GO:0018184"}


id: PBO:0017029
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human MARK3","termid":"PBO:0017029"}


id: GO:0002780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antibacterial peptide.","definition_xrefs":["ISBN:0781735149","PMID:11807545","PMID:15638771","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"},{"relation_name":"part_of","term_name":"antibacterial peptide production","termid":"GO:0002778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"}


id: MONDO:1011667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lundehund syndrome, non-human animal","secondary_identifiers":["OMIA:002031"],"termid":"MONDO:1011667","xrefs":{"Monarch":{"xref_id":"1011667"}}}


id: GO:0046785
data:
  {"annotated_genes":["SJAG_02624","SJAG_02737","SJAG_03835","SJAG_03540","SJAG_02886","SJAG_02609","SJAG_00856","SJAG_01756","SJAG_07018","SJAG_02761","SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79300],"is_not":false,"summary":null,"term":"GO:0046785"},{"annotations":[116735],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[70915,78758,71433],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[116740,100183,106246,99886,116986,100787],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[100788,118458],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The addition of tubulin heterodimers to one or both ends of a microtubule.","definition_xrefs":["GOC:go_curators","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule polymerization or depolymerization","termid":"GO:0031109"},{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0044085","GO:0007010","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"microtubule polymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"microtubule assembly","type":"exact"},{"name":"microtubule formation","type":"related"}],"termid":"GO:0046785","terms_by_termid":{"GO:0007020":null,"GO:0030954":null,"GO:0046785":null,"GO:0051415":null,"GO:0051417":null}}


id: GO:0160148
data:
  {"annotated_genes":["SJAG_04065"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102290],"is_not":false,"summary":null,"term":"GO:0160148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(55) in tRNA = pseudouridine(55) in tRNA.","definition_xrefs":["EC:5.4.99.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04065":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0003824","GO:0016853","GO:0140101"],"is_obsolete":false,"name":"tRNA pseudouridine(55) synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:42532"],"termid":"GO:0160148","terms_by_termid":{"GO:0160148":null}}


id: MONDO:0020334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mast cell leukemia is a malignant form of systemic mastocytosis (SM) characterized, most of the time, by the presence of circulating mast cells.","definition_xrefs":["Orphanet:98851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"},{"relation_name":"is_a","term_name":"systemic mastocytosis","termid":"MONDO:0016586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"mast cell leukemia","secondary_identifiers":["Orphanet:158799","MedDRA:10056450","GARD:19598","UMLS:C0023461","DOID:9254","ONCOTREE:SMMCL","MESH:D007946","SCTID:110002002","ICDO:9742/3","EFO:0007359","icd11.foundation:1359806843","MEDGEN:44123","NCIT:C3169"],"synonyms":[{"name":"Mast cell leukaemia","type":"exact"},{"name":"Mast cell leukemia","type":"exact"},{"name":"SMMCL","type":"related"},{"name":"aleukemic mast cell leukaemia","type":"exact"},{"name":"aleukemic mast cell leukemia","type":"exact"},{"name":"mast-cell leukaemia","type":"exact"},{"name":"mast-cell leukemia","type":"exact"}],"termid":"MONDO:0020334","xrefs":{"Monarch":{"xref_id":"0020334"}}}


id: MONDO:1040019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial disease caused by infection with Enterococcus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent","PMID:33620836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enterococcus infectious disease","synonyms":[{"name":"Enterococcus caused disease or disorder","type":"exact"}],"termid":"MONDO:1040019","xrefs":{"Monarch":{"xref_id":"1040019"}}}


id: GO:0050042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate + oxaloacetate = malate + pyruvate.","definition_xrefs":["EC:1.1.99.7","RHEA:10984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"lactate-malate transhydrogenase activity","secondary_identifiers":["MetaCyc:LACTATE-MALATE-TRANSHYDROGENASE-RXN","KEGG_REACTION:R01447"],"synonyms":[{"name":"(S)-lactate:oxaloacetate oxidoreductase activity","type":"related"},{"name":"malate-lactate transhydrogenase activity","type":"related"}],"termid":"GO:0050042"}


id: MONDO:0001812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharitis","termid":"MONDO:0004785"},{"relation_name":"is_a","term_name":"parasitic eye infection","termid":"MONDO:0020947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"parasitic eyelid infestation","secondary_identifiers":["ICD9:373.6","SCTID:193922006","DOID:13823","MEDGEN:509836","UMLS:C0155183"],"synonyms":[{"name":"parasitic eyelid infestation","type":"exact"},{"name":"parasitic infestation of eyelid","type":"exact"}],"termid":"MONDO:0001812","xrefs":{"Monarch":{"xref_id":"0001812"}}}


id: GO:0030893
data:
  {"annotated_genes":["SJAG_01831","SJAG_05019","SJAG_03698","SJAG_03926"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87597,107530,107611,116853],"is_not":false,"summary":null,"term":"GO:0030893"}]},"cv_name":"cellular_component","definition":"A cohesin complex that mediates sister chromatid cohesion during meiosis; has a subunit composition distinct from that of the mitotic cohesin complex.","definition_xrefs":["GOC:mah","PMID:12750522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cohesin complex","termid":"GO:0008278"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01831":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"meiotic cohesin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034991"],"synonyms":[{"name":"nuclear meiotic cohesin complex","type":"related"}],"termid":"GO:0030893","terms_by_termid":{"GO:0030893":null}}


id: PBO:0029812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cable_organization_during_mitosis","termid":"PBO:0029812"}


id: GO:1990344
data:
  {"annotated_genes":["SJAG_05285"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115613],"is_not":false,"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a secondary cell septum following nuclear division.","definition_xrefs":["PMID:22891259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"},{"relation_name":"part_of","term_name":"mitotic division septum assembly","termid":"GO:0140278"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007049","GO:0000281"],"is_obsolete":false,"name":"secondary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990344","terms_by_termid":{"GO:1990344":null}}


id: MONDO:0014623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the SASS6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 14, primary, autosomal recessive","secondary_identifiers":["MEDGEN:906798","DOID:0070279","OMIM:616402","GARD:16105","UMLS:C4225338"],"synonyms":[{"name":"MCPH14","type":"related"},{"name":"SASS6 autosomal recessive primary microcephaly","type":"exact"},{"name":"autosomal recessive primary microcephaly caused by mutation in SASS6","type":"exact"},{"name":"microcephaly 14, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0014623","xrefs":{"Monarch":{"xref_id":"0014623"}}}


id: PBO:0055734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMO7DN intronic transcript 1","termid":"PBO:0055734"}


id: GO:0009198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine deoxynucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate catabolic process","termid":"GO:0009140"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009192"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside diphosphate breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009198"}


id: PBO:0066665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHO family interacting cell polarization regulator 2","termid":"PBO:0066665"}


id: MONDO:1011761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"naked foal syndrome, non-human animal","secondary_identifiers":["OMIA:002096"],"termid":"MONDO:1011761","xrefs":{"Monarch":{"xref_id":"1011761"}}}


id: GO:0033335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anal fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin development","termid":"GO:0033338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anal fin development","termid":"GO:0033335"}


id: PBO:0077372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM109 divergent transcript","termid":"PBO:0077372"}


id: PBO:0085419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; exports copper; has broad substrate specificity and can transport many mono- and divalent cations; transports a variety of drugs and is required for resistance to quinidine, barban, cisplatin, and bleomycin; contributes to potassium homeostasis; expression is regulated by copper","termid":"PBO:0085419"}


id: MONDO:1011248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Strabismus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"strabismus, non-human animal","termid":"MONDO:1010327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strabismus, domestic cat","secondary_identifiers":["OMIA:000949-9685"],"termid":"MONDO:1011248","xrefs":{"Monarch":{"xref_id":"1011248"}}}


id: PATO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the state of bearer's mechanical, physical, and biochemical processes.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physiological state","termid":"PATO:0001912"}


id: PBO:0087648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; required for assembly and DNA binding activity of the complex","termid":"PBO:0087648"}


id: PBO:0035971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_premeiotic_DNA_replication_during_azygotic_meiotic_cell_cycle","termid":"PBO:0035971"}


id: GO:0010218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of far red light stimulus. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:tb","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to far red light","synonyms":[{"name":"response to far red light stimulus","type":"exact"}],"termid":"GO:0010218"}


id: PBO:0049548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 11","termid":"PBO:0049548"}


id: PBO:0072216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19","termid":"PBO:0072216"}


id: GO:0097106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of a postsynaptic density, a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse.","definition_xrefs":["GOC:sjp","GOC:BHF","PMID:21525273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization organization","termid":"GO:0099084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"postsynaptic density organization","synonyms":[{"name":"PSD organization","type":"exact"},{"name":"post synaptic density organization","type":"exact"},{"name":"post-synaptic density organization","type":"exact"},{"name":"postsynaptic density organisation","type":"exact"}],"termid":"GO:0097106"}


id: MONDO:0017236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the glomeruli that is characterized by a rapid loss in renal function with glomerular crescent formation observed on biopsy; it is often seen in patients with concomitant autoimmune disease, like Goodpasture's syndrome or systemic lupus erythematosus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"rapidly progressive glomerulonephritis","secondary_identifiers":["Orphanet:280569","MedDRA:10018378","ICD9:583.4","NANDO:1200723","SCTID:236392004","UMLS:C0221239","DOID:4776","NCIT:C35264","ICD9:580.4","NANDO:1200714","MEDGEN:113155","ICD9:582.4"],"synonyms":[{"name":"RPGN","type":"exact"},{"name":"crescentic glomerulonephritis","type":"related"}],"termid":"MONDO:0017236","xrefs":{"Monarch":{"xref_id":"0017236"}}}


id: GO:0009791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic development","termid":"GO:0009791"}


id: PR:Q8TF80
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf5 gene.","definition_xrefs":["UniProtKB:Q8TF80","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.02","synonyms":[{"name":"Spom972h-wtf5","type":"exact"}],"termid":"PR:Q8TF80"}


id: MONDO:0014508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vitelliform macular dystrophy in which the cause of the disease is a mutation in the IMPG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult-onset foveomacular vitelliform dystrophy","termid":"MONDO:0011979"},{"relation_name":"is_a","term_name":"IMPG1-related recessive retinopathy","termid":"MONDO:1040037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"vitelliform macular dystrophy 4","secondary_identifiers":["MEDGEN:863779","OMIM:616151","GARD:16064","UMLS:C4015342"],"synonyms":[{"name":"IMPG1 vitelliform macular dystrophy","type":"exact"},{"name":"VMD4","type":"related"},{"name":"macular dystrophy, vitelliform, 4","type":"exact"},{"name":"macular dystrophy, vitelliform, type 4","type":"exact"},{"name":"vitelliform macular dystrophy caused by mutation in IMPG1","type":"exact"}],"termid":"MONDO:0014508","xrefs":{"Monarch":{"xref_id":"0014508"}}}


id: PBO:0030373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_thiamine_starvation","termid":"PBO:0030373"}


id: GO:0036074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Direct ossification in which bone formation occurs as result of the direct transformation of non-bone cells into bone cells without cell division.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direct ossification","termid":"GO:0036072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metaplastic ossification","synonyms":[{"name":"metaplasia","type":"related"}],"termid":"GO:0036074"}


id: PBO:0076857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tet methylcytosine dioxygenase 3","termid":"PBO:0076857"}


id: GO:1900884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tridecane biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tridecane metabolic process","termid":"GO:1900893"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"tridecane biosynthetic process","termid":"GO:1900632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tridecane biosynthetic process","synonyms":[{"name":"regulation of tridecane anabolism","type":"exact"},{"name":"regulation of tridecane biosynthesis","type":"exact"},{"name":"regulation of tridecane formation","type":"exact"},{"name":"regulation of tridecane synthesis","type":"exact"}],"termid":"GO:1900884"}


id: PR:O14194
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ggt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.06c","synonyms":[{"name":"Spom972h-ggt2","type":"exact"},{"name":"gamma-glutamyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutathione hydrolase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14194"}


id: GO:0140702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cyclic GMP-AMP (cGAMP) nucleotide.","definition_xrefs":["PMID:23258412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide binding","termid":"GO:0030551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cyclic GMP-AMP binding","termid":"GO:0140702"}


id: PBO:0047404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 42","termid":"PBO:0047404"}


id: GO:0010504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cell cycle arrest in response to nitrogen starvation.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell cycle arrest in response to nitrogen starvation (obsolete GO:0010504)","termid":"GO:0010504"}


id: PBO:0091461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi3","termid":"PBO:0091461"}


id: GO:0006963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antibacterial peptide biosynthesis.","definition_xrefs":["PMID:10973475","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antibacterial peptide production","termid":"GO:0002803"},{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002807"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"},{"relation_name":"positively_regulates","term_name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of antibacterial peptide biosynthetic process","synonyms":[{"name":"activation of antibacterial peptide biosynthetic process","type":"narrow"},{"name":"antibacterial peptide induction","type":"exact"},{"name":"antibacterial polypeptide induction","type":"exact"},{"name":"stimulation of antibacterial peptide biosynthetic process","type":"narrow"},{"name":"up regulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"up-regulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"upregulation of antibacterial peptide biosynthetic process","type":"exact"}],"termid":"GO:0006963"}


id: GO:0030979
data:
  {"annotated_genes":["SJAG_02916","SJAG_01028","SJAG_03057","SJAG_04184","SJAG_00610","SJAG_00424","SJAG_02278","SJAG_04236","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70325,73176,71279,73038,78490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[92222,89227,94732,102641],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-glucans, compounds composed of glucose residues linked by alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"alpha-glucan metabolic process","termid":"GO:0030978"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glucan anabolism","type":"exact"},{"name":"alpha-glucan biosynthesis","type":"exact"},{"name":"alpha-glucan formation","type":"exact"},{"name":"alpha-glucan synthesis","type":"exact"}],"termid":"GO:0030979","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: MONDO:0022762
data:
  {"annotated_genes":["SJAG_01806"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008684"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 4","termid":"MONDO:0016869"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01806":null},"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 short arm deletion","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20808","ICD10CM:Q93.3","MESH:C537637","icd11.foundation:1460916074","Orphanet:261884","MEDGEN:419441","UMLS:C2931557"],"synonyms":[{"name":"4p deletion","type":"exact"},{"name":"4p monosomy","type":"exact"},{"name":"chromosome 4p deletion","type":"exact"},{"name":"deletion 4p","type":"exact"},{"name":"monosomy 4p","type":"exact"},{"name":"partial deletion of chromosome 4p","type":"exact"},{"name":"partial deletion of the short arm of chromosome 4","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 4","type":"exact"},{"name":"partial monosomy 4p","type":"exact"},{"name":"partial monosomy of chromosome 4p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 4","type":"exact"}],"termid":"MONDO:0022762","terms_by_termid":{"MONDO:0008684":null},"xrefs":{"Monarch":{"xref_id":"0022762"}}}


id: MONDO:0013524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bleeding diathesis due to thromboxane synthesis deficiency (obsolete MONDO:0013524)","termid":"MONDO:0013524","xrefs":{"Monarch":{"xref_id":"0013524"}}}


id: GO:0000815
data:
  {"annotated_genes":["SJAG_05207","SJAG_03783","SJAG_00900","SJAG_00416","SJAG_04489","SJAG_01242"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69811,70569,70804,75525,76174,77560],"is_not":false,"summary":null,"term":"GO:0000815"}]},"cv_name":"cellular_component","definition":"A complex with membrane scission activity that plays a major role in many processes where membranes are remodelled - including endosomal transport (vesicle budding), nuclear envelope organisation (membrane closure, mitotic bridge cleavage), and cytokinesis (abscission).","definition_xrefs":["PMID:31132588","PMID:17556548","PMID:22361144","PMID:28242692","PMID:34449766","PMID:32243490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex","termid":"GO:0036452"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00900":null,"SJAG_01242":null,"SJAG_03783":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0031410","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"ESCRT III complex","references_by_uniquename":{"GO_REF:0000033":null,"PMID:32243490":null},"synonyms":[{"name":"endosomal sorting complex required for transport","type":"broad"}],"termid":"GO:0000815","terms_by_termid":{"GO:0000815":null}}


id: PBO:0086243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may act as a chaperone for cytochrome c oxidase subunits; conserved protein; may act as a chaperone in the degradation of misfolded or unassembled cytochrome c oxidase subunits; localized to matrix face of the mitochondrial inner membrane; member of the AAA family but lacks a protease domain","termid":"PBO:0086243"}


id: GO:0004099
data:
  {"annotated_genes":["SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91567],"is_not":false,"summary":null,"term":"GO:0004099"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: chitin + H2O = chitosan + acetate.","definition_xrefs":["EC:3.5.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0019213","GO:0003824"],"is_obsolete":false,"name":"chitin deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CHITIN-DEACETYLASE-RXN","RHEA:10464"],"synonyms":[{"name":"chitin amidohydrolase activity","type":"related"}],"termid":"GO:0004099","terms_by_termid":{"GO:0004099":null}}


id: MONDO:0019490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary cardiac conduction disorder that may progress to complete atrioventricular (AV) block. The disease is either asymptomatic or manifests as dyspnea, dizziness, syncope, abdominal pain, heart failure or sudden death.","definition_xrefs":["Orphanet:871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"progressive familial heart block","secondary_identifiers":["ICD9:426.6","OMIMPS:113900","DOID:0111073","GARD:10005","SCTID:698249005","SCTID:93130009"],"synonyms":[{"name":"PFHB","type":"exact"},{"name":"familial Lenegre disease","type":"exact"},{"name":"familial Lenègre disease","type":"exact"},{"name":"familial Lev disease","type":"exact"},{"name":"familial Lev-Lenegre disease","type":"exact"},{"name":"familial Lev-Lenègre disease","type":"exact"},{"name":"familial PCCD","type":"exact"},{"name":"familial progressive cardiac conduction defect","type":"related"},{"name":"familial progressive heart block","type":"exact"},{"name":"hereditary bundle branch defect","type":"narrow"}],"termid":"MONDO:0019490","xrefs":{"Monarch":{"xref_id":"0019490"}}}


id: MONDO:0011070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any van Maldergem syndrome in which the cause of the disease is a mutation in the DCHS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"van Maldergem syndrome","termid":"MONDO:0017813"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van Maldergem syndrome 1","secondary_identifiers":["MEDGEN:1644627","DOID:0080585","OMIM:601390","UMLS:C4551950"],"synonyms":[{"name":"Cerebrofacioarticular syndrome","type":"related"},{"name":"DCHS1 van Maldergem syndrome","type":"exact"},{"name":"VAN Maldergem syndrome 1","type":"related"},{"name":"VMLDS1","type":"related"},{"name":"Van Maldergem syndrome type 1","type":"exact"},{"name":"van Maldergem syndrome 1","type":"exact"},{"name":"van Maldergem syndrome caused by mutation in DCHS1","type":"exact"}],"termid":"MONDO:0011070","xrefs":{"Monarch":{"xref_id":"0011070"}}}


id: PBO:0024872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex bromodomain subunit Bdf1","termid":"PBO:0024872"}


id: GO:0103056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A53 + O2 + 2-oxoglutarate = gibberellin A44 diacid + carbon dioxide + succinate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A53, 2-oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0103056)","termid":"GO:0103056"}


id: MONDO:0008633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermediate form of cryopyrin-associated periodic syndrome (CAPS) and is characterized by recurrent fever (with malaise and chills), recurrent urticaria-like skin rash, sensorineural deafness, general signs of inflammation (eye redness, headaches, arthralgia/myalgia) and potentially life-threatening secondary amyloidosis (AA type).","definition_xrefs":["Orphanet:575"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"cryopyrin-associated periodic syndrome","termid":"MONDO:0016168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005046"],"is_obsolete":false,"name":"Muckle-Wells syndrome","secondary_identifiers":["UMLS:C0268390","SCTID:402417009","ICD9:708.8","GARD:8472","NCIT:C119054","DOID:0050854","MedDRA:10064569","NORD:1459","MEDGEN:120634","NANDO:1200467","icd11.foundation:1983358487","NANDO:2201067","OMIM:191900"],"synonyms":[{"name":"Cryopyrin-associated periodic syndrome 2","type":"related"},{"name":"MUCKLE-Wells syndrome","type":"related"},{"name":"MWS","type":"related"},{"name":"Muckle Wells syndrome","type":"related"},{"name":"Muckle-Wells syndrome","type":"exact"},{"name":"Uda syndrome","type":"related"},{"name":"neutrophilic urticaria","type":"exact"},{"name":"urticaria, deafness and amyloidosis","type":"related"},{"name":"urticaria-deafness-amyloidosis syndrome","type":"related"}],"termid":"MONDO:0008633","xrefs":{"Monarch":{"xref_id":"0008633"}}}


id: MONDO:0002462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A renal disorder characterized by damage in the glomeruli. It may be acute or chronic, focal or diffuse, and it may lead to renal failure. Causes include autoimmune disorders, infections, diabetes, and malignancies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephritis","termid":"MONDO:0001166"},{"relation_name":"is_a","term_name":"glomerular disorder","termid":"MONDO:0019722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"glomerulonephritis","secondary_identifiers":["SCTID:36171008","HP:0000099","GARD:6516","NCIT:C26784","DOID:2921","UMLS:C0017658","MEDGEN:6616","MESH:D005921","ICD9:583.9"],"synonyms":[{"name":"bright's disease","type":"related"},{"name":"glomerular nephritis","type":"exact"},{"name":"glomerulonephritis","type":"exact"},{"name":"glomerulonephritis (disease)","type":"exact"},{"name":"nephritis of renal glomerulus","type":"exact"},{"name":"renal glomerulus nephritis","type":"exact"}],"termid":"MONDO:0002462","xrefs":{"Monarch":{"xref_id":"0002462"}}}


id: MONDO:0006424
data:
  {"annotated_genes":["SJAG_05346","SJAG_00289","SJAG_04213","SJAG_04755","SJAG_05313","SJAG_03689","SJAG_00490","SJAG_01111","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[86730,86731,86732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011705"},{"annotations":[84986,84985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[87123,87124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[86737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"}]},"cv_name":"mondo","definition":"A benign, intermediate, or malignant neoplasm that arises from the soft tissue. The most common types are lipomatous (fatty), vascular, smooth muscle, fibrous, and fibrohistiocytic neoplasms.","definition_xrefs":["NCIT:C3377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective and soft tissue neoplasm","termid":"MONDO:0044334"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00490":null,"SJAG_00991":null,"SJAG_01111":null,"SJAG_03689":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"soft tissue neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:SOFTTISSUE","UMLS:C0037579","SCTID:387837005","EFO:1000541","MEDGEN:11495"],"synonyms":[{"name":"SOFTTISSUE","type":"related"},{"name":"neoplasm of soft tissue","type":"exact"},{"name":"neoplasm of the soft tissue","type":"exact"},{"name":"soft tissue neoplasm","type":"exact"},{"name":"soft tissue tumor","type":"exact"},{"name":"soft tissue tumors","type":"exact"},{"name":"soft tissue tumour","type":"exact"},{"name":"soft tissue tumours","type":"exact"},{"name":"tumor of soft tissue","type":"exact"},{"name":"tumor of the soft tissue","type":"exact"},{"name":"tumour of soft tissue","type":"exact"},{"name":"tumour of the soft tissue","type":"exact"}],"termid":"MONDO:0006424","terms_by_termid":{"MONDO:0011655":null,"MONDO:0011705":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0006424"}}}


id: GO:1905661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of telomerase RNA reverse transcriptase activity.","definition_xrefs":["GOC:BHF_telomere","GOC:BHF","GOC:nc","GO_REF:0000059","GOC:TermGenie","PMID:22633954"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of telomerase RNA reverse transcriptase activity (obsolete GO:1905661)","synonyms":[{"name":"regulation of telomerase, catalyst","type":"exact"}],"termid":"GO:1905661"}


id: PBO:0036043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036043"}


id: MONDO:0000649
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the sensory system","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system cancer","termid":"MONDO:0005872"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sensory system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060116"],"synonyms":[{"name":"cancer of sensory system","type":"exact"},{"name":"malignant neoplasm of sensory system","type":"exact"},{"name":"malignant sensory system neoplasm","type":"exact"},{"name":"sensory system cancer","type":"exact"}],"termid":"MONDO:0000649","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0000649"}}}


id: PBO:0034527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_synthase_(NADH)_activity","termid":"PBO:0034527"}


id: PBO:0012221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 3 (predicted)","termid":"PBO:0012221"}


id: GO:1902663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-L-cysteine S-palmitoylation.","definition_xrefs":["PMID:23444136","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidyl-L-cysteine S-palmitoylation","termid":"GO:1902662"},{"relation_name":"is_a","term_name":"negative regulation of protein lipidation","termid":"GO:1903060"},{"relation_name":"negatively_regulates","term_name":"peptidyl-L-cysteine S-palmitoylation","termid":"GO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-L-cysteine S-palmitoylation","synonyms":[{"name":"down regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"down-regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"downregulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"inhibition of peptidyl-L-cysteine S-palmitoylation","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-cysteine S-palmitoylation","type":"narrow"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-cysteine S-palmitoylation","type":"exact"}],"termid":"GO:1902663"}


id: GO:0016517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-12 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-12 receptor activity","synonyms":[{"name":"IL-12 receptor activity","type":"exact"},{"name":"IL-12R","type":"exact"}],"termid":"GO:0016517"}


id: PBO:0080544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 3","termid":"PBO:0080544"}


id: _global:term_tracker_item
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"term_tracker_item","secondary_identifiers":["IAO:0000233"],"termid":"_global:term_tracker_item"}


id: MONDO:0030941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"erythrokeratodermia variabilis","termid":"MONDO:0017851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratodermia variabilis et progressiva 7","secondary_identifiers":["GARD:18674","OMIM:619209","UMLS:C5543106","MEDGEN:1780408"],"synonyms":[{"name":"EKVP7","type":"exact"},{"name":"erythrokeratodermia variabilis et progressiva 7","type":"exact"}],"termid":"MONDO:0030941","xrefs":{"Monarch":{"xref_id":"0030941"}}}


id: PBO:0029917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_squalene_level","termid":"PBO:0029917"}


id: GO:0030759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',4',5,6-tetrahydroxy-3,7-dimethoxyflavone + S-adenosyl-L-methionine(1+) = 3',4',5-trihydroxy-3,6,7-trimethoxyflavone + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:18717","EC:2.1.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"methylquercetagetin 6-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.84-RXN","KEGG_REACTION:R04505"],"synonyms":[{"name":"6-OMT","type":"related"},{"name":"S-adenosyl-L-methionine:3',4',5,6-tetrahydroxy-3,7-dimethoxyflavone 6-O-methyltransferase activity","type":"related"},{"name":"flavonol 6-O-methyltransferase activity","type":"related"},{"name":"flavonol 6-methyltransferase activity","type":"related"}],"termid":"GO:0030759"}


id: GO:0015446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + arsenite(in) = ADP + phosphate + arsenite(out).","definition_xrefs":["PMID:10970874","RHEA:11348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"},{"relation_name":"is_a","term_name":"arsenate ion transmembrane transporter activity","termid":"GO:1901683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ATPase-coupled arsenite transmembrane transporter activity","secondary_identifiers":["MetaCyc:3.6.3.16-RXN","EC:7.3.2.7","TC:3.A.4.1.1"],"synonyms":[{"name":"arsenical pump-driving ATPase activity","type":"related"},{"name":"arsenical resistance ATPase activity","type":"related"},{"name":"arsenical resistance efflux pump","type":"related"},{"name":"arsenite ABC transporter","type":"narrow"},{"name":"arsenite transporting ATPase activity","type":"exact"},{"name":"arsenite-translocating ATPase activity","type":"related"},{"name":"arsenite-transmembrane transporting ATPase activity","type":"related"},{"name":"arsenite-transporting ATPase activity","type":"related"}],"termid":"GO:0015446"}


id: GO:0031047
data:
  {"annotated_genes":["SJAG_03883","SJAG_02908","SJAG_04061","SJAG_04030","SJAG_01008","SJAG_03916","SJAG_01836","SJAG_03193","SJAG_04369","SJAG_04574","SJAG_00414","SJAG_03745","SJAG_00756","SJAG_02594","SJAG_01331","SJAG_01601","SJAG_02409","SJAG_04253","SJAG_02817","SJAG_02725","SJAG_02119","SJAG_02621","SJAG_01867","SJAG_01540","SJAG_03042","SJAG_03680","SJAG_01176","SJAG_01579","SJAG_03689","SJAG_04141","SJAG_02622","SJAG_03635","SJAG_00701","SJAG_04768","SJAG_00058","SJAG_04407","SJAG_03356","SJAG_03664","SJAG_00087","SJAG_04942"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87286,89575,92048,115452],"is_not":false,"summary":null,"term":"GO:0031047"},{"annotations":[117886,115775,98921,99364,110278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033562"},{"annotations":[108288],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060906"},{"annotations":[117888,88164,117776,71055],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990431"},{"annotations":[117551],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010964"},{"annotations":[117914,92624,91660],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043628"},{"annotations":[112847,108912,103886,107150,107577,111651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031048"},{"annotations":[117891,71056],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990432"},{"annotations":[71415,71734,115779],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030422"},{"annotations":[106109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"},{"annotations":[113781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141194"},{"annotations":[111004,98932,106349,99370,110282,110448,113462,114362,117495,95130,115780,118612,88622,88567,115216,117778,114095,91068,96527,112004,117892,93889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"}]},"cv_name":"biological_process","definition":"A process in which an regulatory non-coding RNA molecule reduces expression of target genes. This can occur pre-transcriptionally by assembly of heterochromatin and prevention of transcription or co- or post-transcriptionally by targeting RNAs for degradation or by interfering with splicing or translation. This process starts once the inhibitory RNA molecule has been transcribed, and includes processing of the RNA such as cleavage, modifications, transport from the nucleus to the cytoplasm, loading onto the RISC complex, and the effect on transcription or translation.","definition_xrefs":["PMID:15020054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00087":null,"SJAG_00414":null,"SJAG_00701":null,"SJAG_00756":null,"SJAG_01008":null,"SJAG_01176":null,"SJAG_01331":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_01836":null,"SJAG_01867":null,"SJAG_02119":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02725":null,"SJAG_02817":null,"SJAG_02908":null,"SJAG_03042":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03745":null,"SJAG_03883":null,"SJAG_03916":null,"SJAG_04030":null,"SJAG_04061":null,"SJAG_04141":null,"SJAG_04253":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04574":null,"SJAG_04768":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulatory ncRNA-mediated gene silencing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-211000"],"synonyms":[{"name":"RNA-dependent gene silencing","type":"exact"},{"name":"RNA-mediated gene silencing","type":"related"},{"name":"gene silencing by RNA","type":"related"}],"termid":"GO:0031047","terms_by_termid":{"GO:0010964":null,"GO:0030422":null,"GO:0031047":null,"GO:0031048":null,"GO:0033562":null,"GO:0043628":null,"GO:0060906":null,"GO:0140727":null,"GO:0141194":null,"GO:1902795":null,"GO:1990431":null,"GO:1990432":null}}


id: PBO:0055499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2933","termid":"PBO:0055499"}


id: PBO:0003881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin-A, F-box protein Pof4 (predicted)","termid":"PBO:0003881"}


id: GO:0050741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via O3-riboflavin phosphoryl-L-serine.","definition_xrefs":["RESID:AA0350"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via O3-riboflavin phosphoryl-L-serine (obsolete GO:0050741)","termid":"GO:0050741"}


id: PBO:0090888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-3 peroxisome-plasma membrane adaptor Pex3","termid":"PBO:0090888"}


id: MONDO:0018031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Granulomatous slack skin (GSS) is a variant of mycosis fungoides (MF), a form of cutaneous T-cell lymphoma, and is characterized by the presence of circumscribed areas of pendulous lax skin.","definition_xrefs":["Orphanet:33111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycosis fungoides variant","termid":"MONDO:0045071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005093"],"is_obsolete":false,"name":"granulomatous slack skin disease","secondary_identifiers":["UMLS:C0457002","ICD10CM:C84.0","MEDGEN:99139","SCTID:277796003","NCIT:C35464","GARD:10986"],"synonyms":[{"name":"granulomatous slack skin","type":"exact"}],"termid":"MONDO:0018031","xrefs":{"Monarch":{"xref_id":"0018031"}}}


id: PBO:0075245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 15","termid":"PBO:0075245"}


id: PBO:0043791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPEB2 divergent transcript","termid":"PBO:0043791"}


id: MONDO:0016472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dracunculiasis (Guinea worm disease) is a neglected tropical disease (NTD) characterized by a painful burning skin lesion from which the Dracunculus medinensis parasite emerges approximately 1 year after infection resulting from consumption of unsafe drinking water containing parasite-infected copepods (Cyclops spp., microcrustacea also called water fleas).","definition_xrefs":["Orphanet:231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"},{"relation_name":"is_a","term_name":"filariasis","termid":"MONDO:0016075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dracunculiasis","secondary_identifiers":["SCTID:396334002","MESH:D004320","EFO:0007241","GARD:6286","icd11.foundation:1662537619","NORD:1060","MedDRA:10013618","ICD10CM:B72","DOID:14418","ICD9:125.7","MEDGEN:41653","NCIT:C84677","UMLS:C0013100"],"synonyms":[{"name":"Dracunculosis","type":"exact"},{"name":"Dracunculus medinensis caused disease or disorder","type":"exact"},{"name":"Dracunculus medinensis disease or disorder","type":"exact"},{"name":"Dracunculus medinensis infectious disease","type":"exact"},{"name":"GWD","type":"related"},{"name":"Guinea worm disease","type":"exact"},{"name":"Guinea worm infection","type":"related"},{"name":"Medina worm disease","type":"exact"},{"name":"dracontiasis","type":"exact"},{"name":"infection by Dracunculus medinensis","type":"exact"},{"name":"medinensis","type":"exact"},{"name":"parasitic infection caused by Dracunculus medinensis","type":"related"}],"termid":"MONDO:0016472","xrefs":{"Monarch":{"xref_id":"0016472"}}}


id: GO:1903423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle recycling.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:PARL","PMID:22745285","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle recycling","termid":"GO:0036465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle recycling","synonyms":[{"name":"activation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"activation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"activation of synaptic vesicle recycling","type":"narrow"},{"name":"positive regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"positive regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"up regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"up regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"up regulation of synaptic vesicle recycling","type":"exact"},{"name":"up-regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"up-regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"up-regulation of synaptic vesicle recycling","type":"exact"},{"name":"upregulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"upregulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"upregulation of synaptic vesicle recycling","type":"exact"}],"termid":"GO:1903423"}


id: PBO:0048764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMDS divergent transcript","termid":"PBO:0048764"}


id: PBO:0047688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fms related receptor tyrosine kinase 1","termid":"PBO:0047688"}


id: PBO:0052854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-11","termid":"PBO:0052854"}


id: FYPO:0005758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the initiation of mitotic DNA replication from late-firing origins is abnormal.","definition_xrefs":["GO:0101017","PMID:22987637","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of mitotic DNA replication initiation from late origin","synonyms":[{"name":"abnormal regulation of DNA replication initiation from late origin during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of late origin firing timing","type":"related"},{"name":"abnormal regulation of mitotic DNA replication initiation at late origin","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from late origin during vegetative growth","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from late replication origin","type":"exact"}],"termid":"FYPO:0005758"}


id: MONDO:0859288
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85545],"is_not":false,"summary":null,"term":"MONDO:0859288"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"is_obsolete":false,"name":"bone marrow failure and diabetes mellitus syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774218","OMIM:620044","MEDGEN:1823991"],"termid":"MONDO:0859288","terms_by_termid":{"MONDO:0859288":null},"xrefs":{"Monarch":{"xref_id":"0859288"}}}


id: PBO:0027985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_normal_septum_morphology","termid":"PBO:0027985"}


id: GO:0048255
data:
  {"annotated_genes":["SJAG_04825","SJAG_03283","SJAG_04946","SJAG_00797","SJAG_03696","SJAG_02573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70479,89273],"is_not":false,"summary":null,"term":"GO:0048255"},{"annotations":[89982,78562,99895,78628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"}]},"cv_name":"biological_process","definition":"Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"is_a","term_name":"RNA stabilization","termid":"GO:0043489"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03696":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"mRNA stabilization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0048255","terms_by_termid":{"GO:0048255":null,"GO:0070935":null}}


id: GO:0004819
data:
  {"annotated_genes":["SJAG_04482"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79867],"is_not":false,"summary":null,"term":"GO:0004819"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-glutamine + tRNA(Gln) = AMP + diphosphate + L-glutaminyl-tRNA(Gln).","definition_xrefs":["EC:6.1.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04482":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0016874","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"glutamine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-379982","MetaCyc:GLUTAMINE--TRNA-LIGASE-RXN","RHEA:20121","Reactome:R-HSA-380241"],"synonyms":[{"name":"GlnRS","type":"related"},{"name":"L-glutamine:tRNAGln ligase (AMP-forming)","type":"related"},{"name":"glutamine translase activity","type":"related"},{"name":"glutamine-tRNA synthetase activity","type":"related"},{"name":"glutaminyl ribonucleic acid","type":"related"},{"name":"glutaminyl-tRNA synthetase activity","type":"exact"},{"name":"glutaminyl-transfer RNA synthetase activity","type":"related"},{"name":"glutaminyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004819","terms_by_termid":{"GO:0004819":null}}


id: PBO:0073345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 7","termid":"PBO:0073345"}


id: FYPO:0008090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic anaphase begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal onset of mitotic anaphase B","termid":"FYPO:0008090"}


id: PBO:0059872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 9 like, pseudogene","termid":"PBO:0059872"}


id: PBO:0005869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide Mi","termid":"PBO:0005869"}


id: GO:2000055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:2000055)","synonyms":[{"name":"positive regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000055"}


id: PBO:0001326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase Set8 (predicted)","termid":"PBO:0001326"}


id: GO:0018117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an adenylyl group (adenosine 5'-monophosphate; AMP) to a protein amino acid.","definition_xrefs":["GOC:sart","PMID:21607083","GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein nucleotidylation","termid":"GO:0018175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein adenylylation","secondary_identifiers":["GO:0018176"],"synonyms":[{"name":"protein AMPylation","type":"exact"},{"name":"protein adenylation","type":"exact"},{"name":"protein amino acid adenylylation","type":"exact"}],"termid":"GO:0018117"}


id: PBO:0084997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Na+/H+ antiporter; involved in sodium and potassium efflux through the plasma membrane; required for alkali cation tolerance at acidic pH","termid":"PBO:0084997"}


id: FYPO:0008100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated 5S rRNA measured in a cell is higher than normal during phosphate starvation.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased polyadenylated 5S rRNA level during cellular response to phosphate starvation","termid":"FYPO:0008100"}


id: MONDO:0007810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis vulgaris is a common skin disorder passed down through families that leads to dry, scaly skin. It often begins in early childhood. Treatment may include heavy duty moisturizers which contain chemicals that help the skin to shed normally, including lactic acid, salicylic acid, and urea. Ichthyosis vulgaris can be a nuisance, but it rarely affects overall health. The condition usually disappears during adulthood, but may return in later years. This condition is inherited in an autosomal dominant pattern.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"ichthyosis vulgaris","termid":"MONDO:0024304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"autosomal dominant ichthyosis vulgaris","secondary_identifiers":["SCTID:254157005","ICD10CM:Q80.0","NCIT:C84778","OMIM:146700","Orphanet:462","DOID:1702","UMLS:C0432300","MEDGEN:609440"],"synonyms":[{"name":"autosomal dominant ichthyosis vulgaris","type":"exact"},{"name":"dominant congenital ichthyosiform erythroderma","type":"exact"},{"name":"dominant ichthyosis vulgaris","type":"related"},{"name":"ichthyosis simplex","type":"related"},{"name":"ichthyosis vulgaris","type":"related"},{"name":"ichthyosis vulgaris, autosomal dominant","type":"exact"}],"termid":"MONDO:0007810","xrefs":{"Monarch":{"xref_id":"0007810"}}}


id: PBO:0002273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Dlc2 (predicted)","termid":"PBO:0002273"}


id: PBO:0080134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAMP associated protein B and C","termid":"PBO:0080134"}


id: PBO:0084016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycoprotein involved in cell wall beta-glucan assembly; null mutation leads to severe growth defects, aberrant multibudded morphology, and mating defects","termid":"PBO:0084016"}


id: SO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of genomic sequence known to undergo mutational events with greater frequency than expected by chance.","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutational_hotspot","synonyms":[{"name":"mutational hotspot","type":"exact"}],"termid":"SO:0002186"}


id: GO:0051966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"synaptic transmission, glutamatergic","termid":"GO:0035249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of synaptic transmission, glutamatergic","termid":"GO:0051966"}


id: MONDO:0018353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Refractory celiac disease (RCD) is a complex autoimmune disorder much like the more common celiac disease but, unlike celiac disease, it is resistant or unresponsive to at least 12 months of treatment with a strict gluten-free diet. Gliadin, a component of the wheat storage protein gluten, together with similar proteins in barley and rye, are the villains that trigger the immune reaction in celiac disease. The diagnosis of RCD is made by exclusion, especially of any other disorder that can affect the huge number of thread-like projections that line the interior of the intestine (intestinal villi), such as intestinal lymphoma, Crohn's disease, small intestinal bacterial overgrowth or hypogammaglobulinemia.","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"refractory celiac disease","secondary_identifiers":["GARD:21640","UMLS:C4749333","Orphanet:398063","NORD:1653","EFO:0009266","MEDGEN:1670595","ICD10CM:K90.0"],"synonyms":[{"name":"intractable celiac sprue","type":"exact"},{"name":"intractable coeliac sprue","type":"exact"},{"name":"refractory CD","type":"exact"},{"name":"refractory sprue","type":"exact"},{"name":"type I refractory sprue","type":"narrow"},{"name":"type II refractory sprue","type":"narrow"}],"termid":"MONDO:0018353","xrefs":{"Monarch":{"xref_id":"0018353"}}}


id: MONDO:0010785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternally inherited diabetes and deafness (MIDD) is a mitochondrial disorder characterized by maternally transmitted diabetes and sensorineural deafness.","definition_xrefs":["Orphanet:225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic diabetes","termid":"MONDO:0015967"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005015","MONDO:0004069","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"maternally-inherited diabetes and deafness","secondary_identifiers":["MESH:C536246","ICD9:250.80","MEDGEN:90979","NCIT:C131859","UMLS:C0342289","GARD:4003","SCTID:237619009","OMIM:520000"],"synonyms":[{"name":"Ballinger Wallace syndrome","type":"related"},{"name":"Ballinger-Wallace syndrome","type":"related"},{"name":"MIDD","type":"exact"},{"name":"Niddm with deafness","type":"related"},{"name":"diabetes and deafness, maternally inherited","type":"related"},{"name":"diabetes mellitus type II with deafness","type":"related"},{"name":"diabetes mellitus, type II, with deafness","type":"related"},{"name":"diabetes-deafness syndrome, maternally Transmitted","type":"related"},{"name":"maternally inherited diabetes and deafness","type":"related"},{"name":"mitochondrial diabetes","type":"exact"},{"name":"noninsulin-dependent diabetes mellitus with deafness","type":"related"}],"termid":"MONDO:0010785","xrefs":{"Monarch":{"xref_id":"0010785"}}}


id: PBO:0041425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C8orf44-SGK3 readthrough","termid":"PBO:0041425"}


id: PBO:0016060
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae XRN1","termid":"PBO:0016060"}


id: PBO:0073606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shootin 1","termid":"PBO:0073606"}


id: GO:0009440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyanate, NCO-, the anion of cyanic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"cyanate metabolic process","termid":"GO:0009439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cyanate catabolic process","synonyms":[{"name":"cyanate breakdown","type":"exact"},{"name":"cyanate catabolism","type":"exact"},{"name":"cyanate degradation","type":"exact"}],"termid":"GO:0009440"}


id: PBO:0042414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 26","termid":"PBO:0042414"}


id: MONDO:0007924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bannayan-Riley-Ruvalcaba syndrome (BRRS) is a rare congenital disorder characterized by hamartomatous intestinal polyposis, lipomas, macrocephaly and genital lentiginosis.","definition_xrefs":["Orphanet:109"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"},{"relation_name":"is_a","term_name":"PTEN hamartoma tumor syndrome","termid":"MONDO:0017623"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Bannayan-Riley-Ruvalcaba syndrome","secondary_identifiers":["DOID:0050657","UMLS:C0265326","MEDGEN:78554","NORD:1684","SCTID:21984008","NCIT:C3939","icd11.foundation:357383447","GARD:5887","ICD9:759.6","OMIM:153480"],"synonyms":[{"name":"BRRS","type":"exact"},{"name":"BZS","type":"related"},{"name":"Bannayan syndrome","type":"exact"},{"name":"Bannayan-Riley-Ruvalcaba syndrome","type":"exact"},{"name":"Bannayan-Zonana syndrome","type":"exact"},{"name":"Myhre-Riley-Smith syndrome","type":"exact"},{"name":"RILEY-SMITH syndrome","type":"exact"},{"name":"RMSS","type":"related"},{"name":"Riley-Smith syndrome","type":"related"},{"name":"Ruvalcaba -Myhre-Smith syndrome","type":"related"},{"name":"Ruvalcaba-MYHRE-SMITH syndrome","type":"exact"},{"name":"Ruvalcaba-Myhre-Smith syndrome","type":"related"},{"name":"macrocephaly multiple lipomas and hemangiomata","type":"related"},{"name":"macrocephaly pseudopapilledema and multiple hemangiomas","type":"related"},{"name":"macrocephaly with multiple lipomas and hemangiomas","type":"exact"},{"name":"macrocephaly, multiple lipomas, and hemangiomata","type":"related"},{"name":"macrocephaly, pseudopapilledema, and multiple hemangiomata","type":"related"}],"termid":"MONDO:0007924","xrefs":{"Monarch":{"xref_id":"0007924"}}}


id: PR:O14355
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30D10.09c gene.","definition_xrefs":["UniProtKB:O14355","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C30D10.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.09c","synonyms":[{"name":"Spom972h-SPBC30D10.09c","type":"exact"}],"termid":"PR:O14355"}


id: PBO:0049784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 19 pseudogene","termid":"PBO:0049784"}


id: MONDO:0013120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 5","secondary_identifiers":["DOID:0111776","MEDGEN:414349","OMIM:613080","UMLS:C2751317","MESH:C567766","GARD:15611"],"synonyms":[{"name":"46,XY SEX reversal 5","type":"related"},{"name":"46,XY Sex reversal type 5","type":"exact"},{"name":"46,XY Sex reversal, Cbx2-related","type":"related"},{"name":"46,XY gonadal dysgenesis, complete, Cbx2-related","type":"related"},{"name":"46,XY sex reversal 5","type":"exact"},{"name":"46XY sex reversal 5","type":"exact"},{"name":"SRXY5","type":"related"},{"name":"Sex reversal, XY, Cbx2-related","type":"related"},{"name":"disorder of Sex development, 46,XY, Cbx2-related","type":"related"}],"termid":"MONDO:0013120","xrefs":{"Monarch":{"xref_id":"0013120"}}}


id: MONDO:0022985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of rectum","termid":"MONDO:0021462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diffuse cavernous hemangioma of the rectum","synonyms":[{"name":"cavernous haemangioma of the rectum","type":"related"}],"termid":"MONDO:0022985","xrefs":{"Monarch":{"xref_id":"0022985"}}}


id: PBO:0080385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 13 homolog C","termid":"PBO:0080385"}


id: MONDO:0011738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A descriptive term reflecting increased gyral folding in the frontoparietal regions as determined by magnetic resonance imaging. It has subsequently been shown to represent a cobblestone malformation on histopathology. BFPP typically presents with hypotonia, developmental delay, moderate to severe intellectual disability, pyramidal signs, epileptic seizures, non-progressive cerebellar ataxia, deconjugate gaze, and/or strabismus.","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral polymicrogyria","termid":"MONDO:0017091"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"bilateral frontoparietal polymicrogyria","secondary_identifiers":["icd11.foundation:1119484699","Orphanet:101070","GARD:10784","NCIT:C148367","UMLS:C1847352","DOID:0080922","MEDGEN:376107","OMIM:606854","MESH:C564652"],"synonyms":[{"name":"BFPP","type":"related"},{"name":"bilateral frontoparietal polymicrogyria","type":"exact"},{"name":"cerebellar ataxia with neuronal migration defect","type":"related"},{"name":"polymicrogyria, bilateral frontoparietal","type":"related"}],"termid":"MONDO:0011738","xrefs":{"Monarch":{"xref_id":"0011738"}}}


id: GO:0009819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of prolonged deprivation of water that restores that organism to a normal (non-stressed) condition.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"drought recovery","synonyms":[{"name":"drought tolerance","type":"related"}],"termid":"GO:0009819"}


id: MONDO:0009284
data:
  {"annotated_genes":["SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86011],"is_not":false,"summary":null,"term":"MONDO:0009284"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited glutathione synthetase deficiency","termid":"MONDO:0017909"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019241"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005046","MONDO:0019241"],"is_obsolete":false,"name":"glutathione synthetase deficiency without 5-oxoprolinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565545","DOID:0112252","UMLS:C1856399","MEDGEN:343541","Orphanet:289849","OMIM:231900","icd11.foundation:178842925","GARD:17331"],"synonyms":[{"name":"GSSDE","type":"related"},{"name":"glutathione synthetase deficiency of erythrocytes, hemolytic anaemia due to","type":"related"},{"name":"glutathione synthetase deficiency of erythrocytes, hemolytic anemia due to","type":"related"},{"name":"hemolytic anaemia due to glutathione synthetase deficiency","type":"exact"},{"name":"hemolytic anemia due to glutathione synthetase deficiency","type":"exact"}],"termid":"MONDO:0009284","terms_by_termid":{"MONDO:0009284":null},"xrefs":{"Monarch":{"xref_id":"0009284"}}}


id: GO:0000486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage between the 5.8S rRNA and the 2S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:768488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000483"},{"relation_name":"part_of","term_name":"maturation of 2S rRNA","termid":"GO:0000475"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"cleavage between 5.8S rRNA and 2S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000486"}


id: PBO:0085870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; highly induced in zinc-depleted conditions and has increased expression in NAP1 deletion mutants; VEL1 has a paralog, YOR387C, that arose from a single-locus duplication","termid":"PBO:0085870"}


id: MONDO:0009967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive osteopetrosis 3","termid":"MONDO:0009818"},{"relation_name":"is_a","term_name":"renal tubular acidosis","termid":"MONDO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"renal tubular acidosis 3","secondary_identifiers":["OMIM:267200","UMLS:C1849435","GARD:15228","MESH:C537759","MEDGEN:336601"],"synonyms":[{"name":"RTA, bicarbonate-wasting type","type":"exact"},{"name":"RTA, dislocation type","type":"exact"},{"name":"bicarbonate-wasting RTA","type":"related"},{"name":"renal tubular acidosis 3","type":"exact"},{"name":"renal tubular acidosis III","type":"exact"},{"name":"renal tubular acidosis, distal, type 3","type":"related"}],"termid":"MONDO:0009967","xrefs":{"Monarch":{"xref_id":"0009967"}}}


id: PBO:0086554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL149W is not an essential gene","termid":"PBO:0086554"}


id: PBO:0050897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate filament family orphan 2","termid":"PBO:0050897"}


id: GO:0051831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of a second organism, where the two organisms are in a symbiotic interaction. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down the tissue of the second organism.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development in other organism during symbiotic interaction (obsolete GO:0051831)","synonyms":[{"name":"growth or development in other organism during symbiotic interaction","type":"exact"},{"name":"growth or development within other organism during symbiotic interaction","type":"exact"},{"name":"invasive growth","type":"broad"}],"termid":"GO:0051831"}


id: GO:0048387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of retinoic acid receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinoic acid receptor signaling pathway","termid":"GO:0048385"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinoic acid receptor signaling pathway","synonyms":[{"name":"down regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"down-regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"downregulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"inhibition of retinoic acid receptor signaling pathway","type":"narrow"},{"name":"negative regulation of RAR signaling pathway","type":"exact"},{"name":"negative regulation of RAR signalling pathway","type":"exact"},{"name":"negative regulation of retinoic acid receptor signalling pathway","type":"exact"}],"termid":"GO:0048387"}


id: PBO:0045598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 9 (pseudogene)","termid":"PBO:0045598"}


id: MONDO:0022998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"arthrogryposis","termid":"MONDO:0008779"},{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"distal arthrogryposis Moore weaver type","secondary_identifiers":["MEDGEN:419054","MESH:C536814","UMLS:C2931342","GARD:1884"],"synonyms":[{"name":"Moore Weaver syndrome","type":"related"}],"termid":"MONDO:0022998","xrefs":{"Monarch":{"xref_id":"0022998"}}}


id: PBO:0079391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 4A class IVa","termid":"PBO:0079391"}


id: PBO:0113744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSRC1 pseudogene 1","termid":"PBO:0113744"}


id: MONDO:1010970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysautonomia that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysautonomia, non-human animal","termid":"MONDO:1010229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia, horse","secondary_identifiers":["OMIA:000312-9796"],"termid":"MONDO:1010970","xrefs":{"Monarch":{"xref_id":"1010970"}}}


id: PBO:0080121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAC14 antisense RNA 1","termid":"PBO:0080121"}


id: PBO:0061217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 8 pseudogene 1","termid":"PBO:0061217"}


id: PBO:0054124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1490","termid":"PBO:0054124"}


id: GO:0061429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving oleic acid that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:20395639","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription from RNA polymerase II promoter","termid":"GO:0000436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"positive regulation of transcription from RNA polymerase II promoter by oleic acid","termid":"GO:0061429"}


id: PBO:0041366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 36","termid":"PBO:0041366"}


id: PBO:0113446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit III of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; one of three mitochondrially-encoded subunits; ubiquinone-binding protein","termid":"PBO:0113446"}


id: MONDO:0019610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Zollinger-Ellison syndrome (ZES) is characterized by severe peptic disease (ulcers/esophageal disease) caused by hypergastrinemia secondary to a gastrinoma resulting in increased gastric acid secretion.","definition_xrefs":["Orphanet:913"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"gastrin secretion abnormality","termid":"MONDO:0001770"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Zollinger-Ellison syndrome","secondary_identifiers":["EFO:0007549","NCIT:C3453","icd11.foundation:375645550","SCTID:53132006","MESH:D015408","ICD10CM:C25.4","GARD:7918","MedDRA:10017852","UMLS:C0043515","DOID:0050782","MESH:D015043","SCTID:302824004","HP:0002044","NORD:1877","MEDGEN:53129"],"synonyms":[{"name":"Z E syndrome","type":"related"},{"name":"Z-E syndrome","type":"related"},{"name":"ZES","type":"related"},{"name":"Zollinger Ellison syndrome","type":"exact"},{"name":"Zollinger-Ellison syndrome","type":"exact"},{"name":"Zollinger-Ellison syndrome (disease)","type":"exact"},{"name":"gastrinoma","type":"related"},{"name":"pancreatic ulcerogenic tumor syndrome","type":"related"},{"name":"pancreatic ulcerogenic tumour syndrome","type":"related"}],"termid":"MONDO:0019610","xrefs":{"Monarch":{"xref_id":"0019610"}}}


id: GO:0140084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fusion of haploid amoebae cells with matching mating types to form a larger cell, which ingests additional amoebae and forms a cellulose wall. The resulting macrocyst undergoes recombination and meiosis followed by release of haploid amoebae. An example of this process can be found in Dictyostelium discoideum.","definition_xrefs":["PMID:16592095","PMID:20089169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sexual macrocyst formation","synonyms":[{"name":"macrocyst formation","type":"related"},{"name":"sexual fusion","type":"related"}],"termid":"GO:0140084"}


id: PBO:0052583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 1","termid":"PBO:0052583"}


id: PBO:0046053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F pseudogene 1","termid":"PBO:0046053"}


id: GO:0051191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a prosthetic group, the non-amino acid portion of certain protein molecules. Prosthetic groups may be inorganic or organic and are usually required for the biological activity of the protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"},{"relation_name":"part_of","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prosthetic group biosynthetic process","synonyms":[{"name":"coenzyme and prosthetic group biosynthesis","type":"broad"},{"name":"coenzyme and prosthetic group biosynthetic process","type":"broad"},{"name":"prosthetic group anabolism","type":"exact"},{"name":"prosthetic group biosynthesis","type":"exact"},{"name":"prosthetic group formation","type":"exact"},{"name":"prosthetic group synthesis","type":"exact"}],"termid":"GO:0051191"}


id: MONDO:0013974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pure hair and nail ectodermal dysplasia","termid":"MONDO:0019071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 6, hair/nail type","secondary_identifiers":["OMIM:614928","MEDGEN:767025","DOID:0111659","GARD:18064","UMLS:C3554111"],"synonyms":[{"name":"ECTD6","type":"exact"},{"name":"ectodermal dysplasia 6, hair/nail type","type":"exact"}],"termid":"MONDO:0013974","xrefs":{"Monarch":{"xref_id":"0013974"}}}


id: MONDO:0031199
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"inherited interstitial lung disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:619611"],"termid":"MONDO:0031199","terms_by_termid":{"MONDO:0800029":null},"xrefs":{"Monarch":{"xref_id":"0031199"}}}


id: MONDO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mycosis that involves the integument and its appendages, including hair and nails. Infection may involve the stratum corneum or deeper layers of the epidermis.","direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous mycosis","secondary_identifiers":["SCTID:14560005","DOID:0050134"],"termid":"MONDO:0000254","xrefs":{"Monarch":{"xref_id":"0000254"}}}


id: MONDO:0958344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare closed dysraphism with stalk characterized by a dorsal midline dermal sinus tract lined by keratinizing stratified squamous epithelium extending to the the intrathecal space. Other components such as hair follicles and shafts, mesenchymal derivatives (blood vessels and fibrous tissue) and occasionally nerve fibers can be observed. Inflamed granulation tissue containing mixed neutrophils, plasma cells, lymphocytes, and histiocytes is consistently found in the tract. It can also be associated with an intradural dermoid cyst. This malformation is at risk to cause intrathecal infections (meningitis, empyema) that justify a prophylactic surgery.","definition_xrefs":["Orphanet:645188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysraphism with stalk","termid":"MONDO:0958259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"spinal dermal sinus","termid":"MONDO:0958344","xrefs":{"Monarch":{"xref_id":"0958344"}}}


id: PBO:0000987
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.49","termid":"PBO:0000987"}


id: PBO:0073727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 8","termid":"PBO:0073727"}


id: GO:2001151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of renal water transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renal water transport","termid":"GO:0003097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of renal water transport","termid":"GO:2001151"}


id: PBO:0027416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_during_glucose_starvation","termid":"PBO:0027416"}


id: GO:0031868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prostaglandin F2-alpha receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"prostaglandin F2-alpha receptor binding","synonyms":[{"name":"prostaglandin F2-alpha receptor ligand","type":"narrow"},{"name":"prostanoid FP receptor binding","type":"exact"}],"termid":"GO:0031868"}


id: MONDO:0041535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An mesenteric lymphadenitis caused by infection with Yersinia pseudotuberculosis.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenteric lymphadenitis","termid":"MONDO:0001116"},{"relation_name":"is_a","term_name":"Yersinia pseudotuberculosis infectious disease","termid":"MONDO:0007024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"mesenteric lymphadenitis due to Yersinia infection","secondary_identifiers":["UMLS:C0275758","MEDGEN:546804","SCTID:13272007"],"synonyms":[{"name":"Masshoff's syndrome","type":"exact"},{"name":"Yersinia pseudotuberculosis caused mesenteric lymphadenitis","type":"exact"},{"name":"Yersinia pseudotuberculosis mesenteric lymphadenitis","type":"exact"},{"name":"lymphadenitis mesenterialis Masshoff","type":"exact"},{"name":"mesenteric lymphadenitis due to Yersinia pseudotuberculosis","type":"exact"}],"termid":"MONDO:0041535","xrefs":{"Monarch":{"xref_id":"0041535"}}}


id: PBO:0056039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent transforming growth factor beta binding protein 4","termid":"PBO:0056039"}


id: PBO:0049099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 156","termid":"PBO:0049099"}


id: PBO:0041838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 18","termid":"PBO:0041838"}


id: MONDO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cavernous hemangioma arising from the orbit.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cavernous hemangioma","termid":"MONDO:0003155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"cavernous hemangioma of orbit","secondary_identifiers":["MEDGEN:138059","DOID:14463","NCIT:C4546","SCTID:254998002","UMLS:C0346352","ICD9:228.09"],"synonyms":[{"name":"cavernous angioma of orbit","type":"exact"},{"name":"cavernous angioma of the orbit","type":"exact"},{"name":"cavernous hemangioma of the orbit","type":"exact"},{"name":"orbit cavernous angioma","type":"exact"},{"name":"orbit cavernous hemangioma","type":"exact"}],"termid":"MONDO:0001975","xrefs":{"Monarch":{"xref_id":"0001975"}}}


id: GO:0019441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-tryptophan into other compounds, including kynurenine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan catabolic process","termid":"GO:0006569"},{"relation_name":"is_a","term_name":"kynurenine metabolic process","termid":"GO:0070189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-tryptophan catabolic process to kynurenine","secondary_identifiers":["MetaCyc:TRPKYNCAT-PWY"],"synonyms":[{"name":"tryptophan breakdown to kynurenine","type":"exact"},{"name":"tryptophan catabolic process to kynurenine","type":"exact"},{"name":"tryptophan degradation to kynurenine","type":"exact"}],"termid":"GO:0019441"}


id: PBO:0088666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndc80 complex subunit Nuf2","termid":"PBO:0088666"}


id: GO:1990811
data:
  {"annotated_genes":["SJAG_03062","SJAG_03116","SJAG_01546"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73813,96563,102841],"is_not":false,"summary":null,"term":"GO:1990811"}]},"cv_name":"cellular_component","definition":"A protein ternary complex that anchors microtubule minus ends to mitotic spindle pole bodies. The founding complex contains a microtubule anchoring protein (Msd1 in fission yeast), A WD-repeat Wdr8 family protein and and a minus end-directed kinesin.","definition_xrefs":["PMID:25987607","PMID:29021344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_03062":null,"SJAG_03116":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MWP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Msd1-Wdr8-Pkl1 complex","type":"exact"}],"termid":"GO:1990811","terms_by_termid":{"GO:1990811":null}}


id: PBO:0067899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 201","termid":"PBO:0067899"}


id: MONDO:0011954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial melanoma","termid":"MONDO:0018961"},{"relation_name":"excluded_subClassOf","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 4","secondary_identifiers":["UMLS:C1842643","MEDGEN:334129","OMIM:608035"],"synonyms":[{"name":"CMM4","type":"exact"},{"name":"melanoma, cutaneous malignant, 4","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0011954","xrefs":{"Monarch":{"xref_id":"0011954"}}}


id: PBO:0074091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 6","termid":"PBO:0074091"}


id: GO:0016274
data:
  {"annotated_genes":["SJAG_03548","SJAG_02756","SJAG_00596","SJAG_02271"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008469"},{"annotations":[80064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019702"},{"annotations":[100223,112458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035242"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (protein)-arginine = S-adenosyl-L-homocysteine + (protein)-N-methyl-arginine.","definition_xrefs":["GOC:mah","PMID:12351636","PMID:31284549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"arginine N-methyltransferase activity","termid":"GO:0016273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_02271":null,"SJAG_02756":null,"SJAG_03548":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0140096","GO:0016740","GO:0008276","GO:0003824"],"is_obsolete":false,"name":"protein-arginine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5205822","Reactome:R-HSA-8934735","Reactome:R-HSA-5205820","Reactome:R-HSA-191790","Reactome:R-HSA-5205798","Reactome:R-HSA-5229010","Reactome:R-HSA-5218952","Reactome:R-HSA-5229203","Reactome:R-HSA-8879123","Reactome:R-HSA-5205824","Reactome:R-HSA-5205867","Reactome:R-HSA-5661126"],"synonyms":[{"name":"PRMT activity","type":"exact"}],"termid":"GO:0016274","terms_by_termid":{"GO:0008469":null,"GO:0019702":null,"GO:0035242":null}}


id: PR:O74416
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome maturation protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12828:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome maturation factor ump1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC14G10.03c","secondary_identifiers":["UniProtKB:O74416"],"synonyms":[{"name":"SPCC14G10.03c","type":"related"},{"name":"Spom972h-POMP","type":"exact"}],"termid":"PR:O74416"}


id: PR:P04551
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal-type cyclin-dependent kinase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA","UniProtKB:P04551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","termid":"PR:000036301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"CDK1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cdc2","type":"exact"},{"name":"cdk1","type":"related"},{"name":"cell division control protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cell division protein kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p34 protein kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pi002, SPBC11B10.09","type":"related"},{"name":"swo2","type":"related"}],"termid":"PR:P04551"}


id: PR:O13875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.10c gene.","definition_xrefs":["UniProtKB:O13875","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Sel1-like repeat-containing protein C1B3.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.10c","synonyms":[{"name":"Spom972h-SPAC1B3.10c","type":"exact"}],"termid":"PR:O13875"}


id: PBO:0044840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 128","termid":"PBO:0044840"}


id: PBO:0042745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPS-CORT readthrough","termid":"PBO:0042745"}


id: FYPO:0003551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which an RNA catabolic process is abnormal.","definition_xrefs":["PomBase:mah","GO:0006401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal RNA catabolic process","synonyms":[{"name":"abnormal RNA breakdown","type":"exact"},{"name":"abnormal RNA catabolism","type":"exact"},{"name":"abnormal RNA degradation","type":"exact"}],"termid":"FYPO:0003551"}


id: GO:0030535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Feeding behavior in a fully developed and mature organism, as described in insects.","definition_xrefs":["GOC:jid","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete adult feeding behavior (sensu Insecta) (obsolete GO:0030535)","synonyms":[{"name":"adult feeding behavior (sensu Insecta)","type":"exact"}],"termid":"GO:0030535"}


id: MONDO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prolapse of female genital organ","termid":"MONDO:0001592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midline cystocele","secondary_identifiers":["DOID:14131","ICD10CM:N81.11","UMLS:C1456248","SCTID:423633003","MEDGEN:733480","ICD9:618.01"],"termid":"MONDO:0001886","xrefs":{"Monarch":{"xref_id":"0001886"}}}


id: GO:0001891
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An invagination of the cell membrane formed by an actin dependent process during phagocytosis. Following internalization it is converted into a phagosome.","definition_xrefs":["PMID:10358769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"phagocytic cup","termid":"GO:0001891"}


id: PBO:0047962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAT regulator of WNT signaling pathway 2","termid":"PBO:0047962"}


id: FYPO:0007574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle pole body for a shorter time than normal.","definition_xrefs":["PMID:25501814","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of protein localization to mitotic spindle pole body","synonyms":[{"name":"decreased duration of protein localisation to mitotic spindle pole body","type":"exact"},{"name":"decreased duration of protein localization to mitotic SPB","type":"exact"},{"name":"decreased duration of protein localization to mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased duration of protein localization to spindle pole body during vegetative growth","type":"exact"},{"name":"reduced duration protein localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0007574"}


id: MOD:01319
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:11510821","Unimod:176#H","PubMed:9448752","PubMed:12422359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of BHT quinone methide to histidine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01319"}


id: PBO:0065863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB20, member RAS oncogene family","termid":"PBO:0065863"}


id: MONDO:0020636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mendelian susceptibility to mycobacterial diseases due to a complete deficiency","termid":"MONDO:0020636","xrefs":{"Monarch":{"xref_id":"0020636"}}}


id: GO:0071523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a TIR domain interaction.","definition_xrefs":["GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete TIR domain-mediated complex assembly (obsolete GO:0071523)","termid":"GO:0071523"}


id: PBO:0005209
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae PET127","termid":"PBO:0005209"}


id: PBO:0049673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1","termid":"PBO:0049673"}


id: FYPO:0003293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UDP-galactose transmembrane transport occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal UDP-galactose transmembrane transport","termid":"FYPO:0003292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased UDP-galactose transmembrane transport","synonyms":[{"name":"increased UDP-galactose transmembrane transport during mitotic cell cycle","type":"related"},{"name":"increased UDP-galactose transmembrane transport during vegetative growth","type":"exact"}],"termid":"FYPO:0003293"}


id: GO:0120158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of collagen catabolic process","termid":"GO:0010710"},{"relation_name":"is_a","term_name":"positive regulation of collagen metabolic process","termid":"GO:0010714"},{"relation_name":"positively_regulates","term_name":"collagen catabolic process","termid":"GO:0030574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collagen catabolic process","synonyms":[{"name":"activation of collagen catabolic process","type":"narrow"},{"name":"positive regulation of collagen breakdown","type":"exact"},{"name":"positive regulation of collagen catabolism","type":"exact"},{"name":"positive regulation of collagen degradation","type":"exact"},{"name":"up regulation of collagen catabolic process","type":"exact"},{"name":"up-regulation of collagen catabolic process","type":"exact"},{"name":"upregulation of collagen catabolic process","type":"exact"}],"termid":"GO:0120158"}


id: PBO:0049138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein signaling modulator 2","termid":"PBO:0049138"}


id: PBO:0051960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPRID2 divergent transcript","termid":"PBO:0051960"}


id: GO:2001255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K36 trimethylation.","definition_xrefs":["PMID:17948059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K36 trimethylation (obsolete GO:2001255)","termid":"GO:2001255"}


id: MONDO:0030332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 46","secondary_identifiers":["MEDGEN:1780196","UMLS:C5543646","OMIM:619436"],"synonyms":[{"name":"CILD46","type":"exact"},{"name":"ciliary dyskinesia, primary, 46","type":"exact"}],"termid":"MONDO:0030332","xrefs":{"Monarch":{"xref_id":"0030332"}}}


id: PBO:0076191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ubiquitin like modifier 2","termid":"PBO:0076191"}


id: PBO:0029372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0029372"}


id: MONDO:0018212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of cervical artery dissection that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"cervical artery dissection","termid":"MONDO:0006061"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial cervical artery dissection","secondary_identifiers":["Orphanet:36382","GARD:18823","UMLS:C4755308","MEDGEN:1659372"],"synonyms":[{"name":"familial CAD","type":"exact"},{"name":"hereditary CAD","type":"exact"},{"name":"hereditary cervical artery dissection","type":"exact"}],"termid":"MONDO:0018212","xrefs":{"Monarch":{"xref_id":"0018212"}}}


id: MONDO:0044887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-Hodgkin lymphoma that arises from the central nervous system.","definition_xrefs":["NCIT:C114779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary central nervous system lymphoma","termid":"MONDO:0002571"},{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"central nervous system non-hodgkin lymphoma","secondary_identifiers":["MEDGEN:745669","SCTID:448254007","UMLS:C2213246"],"synonyms":[{"name":"Central nervous system non-Hodgkin lymphoma","type":"exact"},{"name":"Primary Central nervous system non-Hodgkin lymphoma","type":"exact"},{"name":"central nervous system non-Hodgkin lymphoma","type":"exact"},{"name":"non-Hodgkin lymphoma of central nervous system","type":"exact"}],"termid":"MONDO:0044887","xrefs":{"Monarch":{"xref_id":"0044887"}}}


id: MONDO:0044689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory optic neuropathy characterized by recurrent episodes of idiopathic inflammation of the optic nerve head with optic disk edema associated with macular exudate in a star-shaped pattern. Patients present with acute visual loss, most typically in the form of a large central scotoma. Pain is mild or absent. Bilateral involvement is frequent and usually sequential. The interval between attacks is highly variable, ranging from months to several years. Visual loss is cumulative with each attack and often severe.","definition_xrefs":["Orphanet:499103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune/inflammatory optic neuropathy","termid":"MONDO:0044685"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"recurrent idiopathic neuroretinitis","secondary_identifiers":["UMLS:C5680094","GARD:22040","MEDGEN:1814450"],"synonyms":[{"name":"RINR","type":"exact"}],"termid":"MONDO:0044689","xrefs":{"Monarch":{"xref_id":"0044689"}}}


id: MONDO:0006737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Slow or difficult obstetric labor or childbirth.","definition_xrefs":["MESH:D004420"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystocia","secondary_identifiers":["UMLS:C0013418","EFO:1000911","MEDGEN:3939"],"termid":"MONDO:0006737","xrefs":{"Monarch":{"xref_id":"0006737"}}}


id: GO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP = pppA(2'p5'A)n oligomers. This reaction requires the binding of double-stranded RNA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase activity","secondary_identifiers":["MetaCyc:RXN-13648","EC:2.7.7.84","Reactome:R-HSA-8985104","RHEA:34407","Reactome:R-HSA-8985091","Reactome:R-HSA-8983680"],"synonyms":[{"name":"(2-5')oligo(A) synthetase activity","type":"exact"},{"name":"2'-5' oligoadenylate synthetase activity","type":"exact"},{"name":"2-5A synthetase activity","type":"exact"},{"name":"oligo-2',5'-adenylate synthetase activity","type":"exact"}],"termid":"GO:0001730"}


id: MONDO:0006198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary carcinoma of the endometrium characterized by the presence of malignant squamous cells.","definition_xrefs":["NCIT:C8719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial carcinoma","termid":"MONDO:0002447"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial squamous cell carcinoma","secondary_identifiers":["icd11.foundation:1130568776","UMLS:C1333396","EFO:1000240","MEDGEN:234217","DOID:5533"],"synonyms":[{"name":"endometrial squamous cell carcinoma","type":"exact"},{"name":"endometrium squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of endometrium","type":"exact"},{"name":"squamous cell carcinoma of the endometrium","type":"exact"}],"termid":"MONDO:0006198","xrefs":{"Monarch":{"xref_id":"0006198"}}}


id: MONDO:0022576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilirubin induced brain injury in the newborn","termid":"MONDO:0022576","xrefs":{"Monarch":{"xref_id":"0022576"}}}


id: PR:O43001
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syj1 gene.","definition_xrefs":["UniProtKB:O43001","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 5-phosphatase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.02","synonyms":[{"name":"Spom972h-syj1","type":"exact"},{"name":"synaptojanin-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43001"}


id: PBO:0064666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 1","termid":"PBO:0064666"}


id: MONDO:0004934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the periosteum. The condition is generally chronic, and is marked by tenderness and swelling of the bone and an aching pain. Acute periostitis is due to infection, is characterized by diffuse suppuration, severe pain, and constitutional symptoms, and usually results in necrosis. (Dorland, 27th ed)","definition_xrefs":["MESH:D010522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periostitis","secondary_identifiers":["NCIT:C13184","HP:0040165","SCTID:41910004","UMLS:C0031111","MEDGEN:45816","icd11.foundation:505688542","DOID:9957"],"synonyms":[{"name":"inflammation of periosteum","type":"exact"},{"name":"periosteum","type":"exact"},{"name":"periosteum inflammation","type":"exact"},{"name":"periostitis","type":"exact"},{"name":"periostitis (disease)","type":"exact"}],"termid":"MONDO:0004934","xrefs":{"Monarch":{"xref_id":"0004934"}}}


id: GO:0019855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a calcium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel regulator activity","termid":"GO:0005246"},{"relation_name":"is_a","term_name":"ion channel inhibitor activity","termid":"GO:0008200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"calcium channel inhibitor activity","termid":"GO:0019855"}


id: PBO:0064308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"procollagen-lysine,2-oxoglutarate 5-dioxygenase 3","termid":"PBO:0064308"}


id: MONDO:0001190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Brucella suis.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brucellosis","termid":"MONDO:0005683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brucella suis brucellosis","secondary_identifiers":["UMLS:C0275594","DOID:11076","MEDGEN:546685"],"synonyms":[{"name":"Brucella suis caused disease or disorder","type":"exact"},{"name":"Brucella suis disease or disorder","type":"exact"},{"name":"Brucella suis infectious disease","type":"exact"}],"termid":"MONDO:0001190","xrefs":{"Monarch":{"xref_id":"0001190"}}}


id: FYPO:0004151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of pyridoxine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular pyridoxine level","synonyms":[{"name":"decreased cellular pyridoxine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular pyridoxine level during vegetative growth","type":"exact"},{"name":"decreased pyridoxine accumulation","type":"related"},{"name":"reduced cellular pyridoxine level","type":"exact"}],"termid":"FYPO:0004151"}


id: PBO:0040409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G3","termid":"PBO:0040409"}


id: FYPO:0000180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which a cellular response to oxidative stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress","termid":"FYPO:0000162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cellular response to oxidative stress","synonyms":[{"name":"abnormal oxidative stress response","type":"exact"}],"termid":"FYPO:0000180"}


id: GO:0009305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of biotin (vitamin B7 / vitamin H) to a protein amino acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein biotinylation (obsolete GO:0009305)","synonyms":[{"name":"protein amino acid biotinylation","type":"exact"}],"termid":"GO:0009305"}


id: GO:2001067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pullulan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pullulan binding","termid":"GO:2001067"}


id: PBO:0059916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 2","termid":"PBO:0059916"}


id: GO:0090582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + D-fructose(out) = protein cysteine + D-fructose-1-phosphate(in).","definition_xrefs":["PMID:8626640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0003824","GO:0016740","GO:0022857"],"is_obsolete":false,"name":"protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity","termid":"GO:0090582"}


id: RO:0002384
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has developmental potential involving y iff x is capable of a developmental process with output y. y may be the successor of x, or may be a different structure in the vicinity (as for example in the case of developmental induction).","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_related_to","termid":"RO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_developmental_potential_involving","termid":"RO:0002384"}


id: PBO:0054915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2329","termid":"PBO:0054915"}


id: MONDO:0003140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the glomeruli characterized by the accumulation of antibody-antigen immune complexes, resulting in glomerular damage and impaired kidney function.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"immune-complex glomerulonephritis","secondary_identifiers":["ICD9:583.89","NCIT:C35800","SCTID:123752003","MEDGEN:148168","DOID:4784","UMLS:C0744421"],"synonyms":[{"name":"immune Complex glomerulonephritis","type":"exact"}],"termid":"MONDO:0003140","xrefs":{"Monarch":{"xref_id":"0003140"}}}


id: GO:0047573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-acetamidobutanoate + H2O = acetate + 4-aminobutanoate.","definition_xrefs":["EC:3.5.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0019213","GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"4-acetamidobutyrate deacetylase activity","secondary_identifiers":["RHEA:15897","MetaCyc:RXN-36"],"synonyms":[{"name":"4-acetamidobutanoate amidohydrolase activity","type":"related"}],"termid":"GO:0047573"}


id: PBO:0070591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 57","termid":"PBO:0070591"}


id: GO:1900152
data:
  {"annotated_genes":["SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.","definition_xrefs":["GOC:mcc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:1900151"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"negatively_regulates","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:0000288"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"down regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"down regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"down regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"down regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"down regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"down regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"down regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"down regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"down-regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"down-regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"down-regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"down-regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"down-regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"down-regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"down-regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"down-regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"down-regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"downregulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"downregulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"downregulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"downregulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"downregulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"downregulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"downregulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"downregulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"downregulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"inhibition of deadenylation-dependent mRNA decay","type":"narrow"},{"name":"inhibition of mRNA breakdown, deadenylation-dependent decay","type":"narrow"},{"name":"inhibition of mRNA catabolic process, deadenylation-dependent","type":"narrow"},{"name":"inhibition of mRNA catabolic process, deadenylylation-dependent","type":"narrow"},{"name":"inhibition of mRNA catabolism, deadenylation-dependent","type":"narrow"},{"name":"inhibition of mRNA catabolism, deadenylylation-dependent","type":"narrow"},{"name":"inhibition of mRNA degradation, deadenylation-dependent decay","type":"narrow"},{"name":"inhibition of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"narrow"},{"name":"inhibition of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"narrow"},{"name":"negative regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"negative regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"negative regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"negative regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"negative regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"negative regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"negative regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"negative regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"}],"termid":"GO:1900152","terms_by_termid":{"GO:0060212":null}}


id: MONDO:0016645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare neoplastic disease (obsolete MONDO:0016645)","secondary_identifiers":["Orphanet:250908"],"termid":"MONDO:0016645","xrefs":{"Monarch":{"xref_id":"0016645"}}}


id: PR:Q9P6I3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1198.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6I3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase C1198.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.07c","synonyms":[{"name":"Spom972h-SPBC1198.07c","type":"exact"},{"name":"endo-alpha-1->6-D-mannanase C1198.07c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I3"}


id: GO:0050052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + leukotriene E(4) + NADPH + O2 = 20-hydroxy-leukotriene E(4) + H2O + NADP+.","definition_xrefs":["EC:1.14.13.34","RHEA:24120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"leukotriene-E4 20-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04256","MetaCyc:LEUKOTRIENE-E4-20-MONOOXYGENASE-RXN"],"synonyms":[{"name":"(7E,9E,11Z,14Z)-(5S,6R)-6-(cystein-S-yl)-5-hydroxyicosa-7,9,11,14-tetraenoate,NADPH:oxygen oxidoreductase (20-hydroxylating)","type":"related"},{"name":"leukotriene-E(4) omega-hydroxylase activity","type":"related"},{"name":"leukotriene-E4 omega-hydroxylase activity","type":"related"},{"name":"leukotriene-E4 w-hydroxylase activity","type":"exact"}],"termid":"GO:0050052"}


id: PBO:0090890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA exonuclease Rrp17","termid":"PBO:0090890"}


id: PBO:0016517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M17 cytoplasmic leucyl aminopeptidase yspII (LAP yspII)","termid":"PBO:0016517"}


id: GO:0090703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which a three-stranded D-loop DNA is unwound or 'melted'.","definition_xrefs":["PMID:26503245"],"gene_count":0,"genotype_count":0,"name":"obsolete triplex DNA unwinding (obsolete GO:0090703)","termid":"GO:0090703"}


id: PBO:0056328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K9 divergent transcript","termid":"PBO:0056328"}


id: GO:0062132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of L-glutamine biosynthesis.","definition_xrefs":["GOC:ha","PMID:19755423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamine family amino acid metabolic process","termid":"GO:0000820"},{"relation_name":"is_a","term_name":"regulation of amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"L-glutamine biosynthetic process","termid":"GO:1901704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of L-glutamine biosynthetic process","termid":"GO:0062132"}


id: FYPO:0006590
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the endoplasmic reticulum is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to endoplasmic reticulum","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"ectopic protein localization to endoplasmic reticulum","type":"exact"},{"name":"protein mislocalised to endoplasmic reticulum","type":"exact"},{"name":"protein mislocalized to ER","type":"exact"}],"termid":"FYPO:0006590","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: MONDO:0013976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pure hair and nail ectodermal dysplasia in which the cause of the disease is a mutation in the HOXC13 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hair and nail ectodermal dysplasia","termid":"MONDO:0019071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 9, hair/nail type","secondary_identifiers":["GARD:18066","MEDGEN:767041","OMIM:614931","UMLS:C3554127","DOID:0111656"],"synonyms":[{"name":"ECTD9","type":"related"},{"name":"HOXC13 pure hair and nail ectodermal dysplasia","type":"exact"},{"name":"ectodermal dysplasia 9, hair/nail type","type":"exact"},{"name":"pure hair and nail ectodermal dysplasia caused by mutation in HOXC13","type":"exact"}],"termid":"MONDO:0013976","xrefs":{"Monarch":{"xref_id":"0013976"}}}


id: PBO:0065454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit ubiquitin receptor, non-ATPase 2","termid":"PBO:0065454"}


id: PBO:0005827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase (predicted)","termid":"PBO:0005827"}


id: GO:0033239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"negatively_regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amine metabolic process","synonyms":[{"name":"negative regulation of amine metabolism","type":"exact"},{"name":"negative regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033239"}


id: PBO:0081236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 2","termid":"PBO:0081236"}


id: PBO:0113258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Permease of basic amino acids in vacuolar membrane; targeted to vacuole via AP-3 pathway","termid":"PBO:0113258"}


id: PBO:0068470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 47, pseudogene","termid":"PBO:0068470"}


id: PBO:0013791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase/ flavoprotein fusion protein Hal3","termid":"PBO:0013791"}


id: PBO:0079271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC39C antisense RNA 1","termid":"PBO:0079271"}


id: MOD:01667
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with epicocconone.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"epicocconone derivatized residue","termid":"MOD:01666"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-epicoccononyl lysine adduct","synonyms":[{"name":"(6Z,7aS)-3-[(1Z,4E,6E,8E)-1-hydroxy-3-oxodeca-1,4,6,8-tetraen-1-yl]-7a-methyl-6-[([(1S)-1-amino-1-carboxylpentyl]amino)methylidene]-5-[(2S)-2,3-dihydroxypropyl]-1-benzofuran-2,7(6H,7aH)-dione","type":"exact"},{"name":"DeepPurple","type":"exact"},{"name":"LavaPurple","type":"exact"},{"name":"Lightning Fast","type":"exact"}],"termid":"MOD:01667"}


id: MONDO:0010602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common form of hemophilia characterized by spontaneous or prolonged hemorrhages due to factor VIII deficiency.","definition_xrefs":["Orphanet:98878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"hemophilia","termid":"MONDO:0018660"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemophilia A","secondary_identifiers":["OMIM:306700","UMLS:C0019069","NCIT:C27146","OMIM:134500","MESH:D006467","NORD:1221","SCTID:234440005","NANDO:2200676","GARD:6591","ICD9:286.0","DOID:12134","icd11.foundation:337607970","MedDRA:10016080","MEDGEN:5501"],"synonyms":[{"name":"HEMA","type":"related"},{"name":"Haemophilia A","type":"related"},{"name":"Subhemophilia","type":"exact"},{"name":"autosomal haemophilia a","type":"related"},{"name":"autosomal hemophilia a","type":"related"},{"name":"classic haemophilia","type":"related"},{"name":"classic hemophilia","type":"related"},{"name":"classical haemophilia","type":"related"},{"name":"classical hemophilia","type":"related"},{"name":"congenital factor VIII disorder","type":"exact"},{"name":"factor 8 deficiency","type":"related"},{"name":"factor VIII deficiency","type":"exact"},{"name":"haemophilia A, congenital","type":"related"},{"name":"haemophilia a, X-linked recessive","type":"exact"},{"name":"haemophilia type A","type":"exact"},{"name":"haemophilia type a","type":"exact"},{"name":"hem A","type":"related"},{"name":"hemophilia A","type":"exact"},{"name":"hemophilia A, congenital","type":"related"},{"name":"hemophilia a, X-linked recessive","type":"exact"},{"name":"hemophilia type A","type":"exact"},{"name":"hemophilia type a","type":"exact"},{"name":"hemophilia, classic","type":"related"},{"name":"hereditary Factor VIII deficiency","type":"exact"},{"name":"hereditary Factor VIII deficiency disease","type":"exact"}],"termid":"MONDO:0010602","xrefs":{"Monarch":{"xref_id":"0010602"}}}


id: GO:0036414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolysis of peptidyl-arginine to form peptidyl-citrulline on a histone protein.","definition_xrefs":["GOC:als","PMID:23175390","PMID:22853951"],"gene_count":0,"genotype_count":0,"name":"obsolete histone citrullination (obsolete GO:0036414)","synonyms":[{"name":"histone deimination","type":"exact"}],"termid":"GO:0036414"}


id: PATO:0001365
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having spines, thorns or similar thin projections on its surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spiny","termid":"PATO:0001365"}


id: GO:0080117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Lateral growth of a plant axis (shoot axis or root) that is an increase in thickness resulting from formation of secondary vascular tissues by the vascular cambium.","definition_xrefs":["ISBN:0471245208","PMID:19074290","PO:0005598","PO:0025004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral growth","termid":"GO:0080190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary growth","synonyms":[{"name":"cambial secondary growth","type":"exact"}],"termid":"GO:0080117"}


id: GO:1904639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a resveratrol stimulus.","definition_xrefs":["PMID:23555824","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to resveratrol","termid":"GO:1904638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to resveratrol","termid":"GO:1904639"}


id: GO:0008936
data:
  {"annotated_genes":["SJAG_04467"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109410],"is_not":false,"summary":null,"term":"GO:0008936"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinamide + H2O = nicotinate + NH4+.","definition_xrefs":["RHEA:14545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidase activity","termid":"GO:0004040"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"nicotinamidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.1.19","MetaCyc:NICOTINAMID-RXN"],"synonyms":[{"name":"NAMase activity","type":"related"},{"name":"YNDase activity","type":"related"},{"name":"nicotinamide amidase activity","type":"related"},{"name":"nicotinamide amidohydrolase activity","type":"related"},{"name":"nicotinamide deaminase activity","type":"related"},{"name":"nicotine deamidase activity","type":"related"}],"termid":"GO:0008936","terms_by_termid":{"GO:0008936":null}}


id: GO:1901735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (R)-mevalonic acid.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(R)-mevalonic acid metabolic process","synonyms":[{"name":"(R) mevalonate metabolism","type":"exact"},{"name":"(R)-mevalonic acid metabolism","type":"exact"}],"termid":"GO:1901735"}


id: GO:2000579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ATP-dependent microtubule motor activity, minus-end-directed.","definition_xrefs":["GOC:vw","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of microtubule motor activity, minus-end-directed (obsolete GO:2000579)","synonyms":[{"name":"positive regulation of ATP-dependent microtubule motor activity, minus-end-directed","type":"exact"},{"name":"positive regulation of kinesin ATP phosphohydrolase (minus-end-directed)","type":"exact"},{"name":"positive regulation of minus-end-directed kinesin ATPase activity","type":"exact"},{"name":"positive regulation of minus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000579"}


id: PBO:0055719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMLN antisense RNA 1","termid":"PBO:0055719"}


id: PBO:0029613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_vegetative_cell","termid":"PBO:0029613"}


id: GO:0051492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament bundle assembly","termid":"GO:0032231"},{"relation_name":"is_a","term_name":"regulation of actomyosin structure organization","termid":"GO:0110020"},{"relation_name":"regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"regulation of stress fiber assembly","synonyms":[{"name":"regulation of stress fibre biosynthesis","type":"related"},{"name":"regulation of stress fibre formation","type":"exact"}],"termid":"GO:0051492"}


id: GO:0048356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur in the root epithelium; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"part_of","term_name":"root epithelial mucilage metabolic process","termid":"GO:0048361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root epithelial mucilage biosynthetic process","synonyms":[{"name":"root epithelial mucilage anabolism","type":"exact"},{"name":"root epithelial mucilage biosynthesis","type":"exact"},{"name":"root epithelial mucilage formation","type":"exact"},{"name":"root epithelial mucilage synthesis","type":"exact"}],"termid":"GO:0048356"}


id: RO:HOM0000034
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Orthology that involves two genes when duplications more recent than the species split have occurred in one species but not the other.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_orthology_relationship_with","termid":"RO:HOM0000017"},{"relation_name":"is_a","term_name":"in_1_to_many_homology_relationship_with","termid":"RO:HOM0000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_1_to_many_orthology_relationship_with","synonyms":[{"name":"1 to many orthologous to","type":"exact"},{"name":"1:many orthology","type":"exact"},{"name":"co-orthology","type":"related"},{"name":"many to 1 orthology","type":"related"},{"name":"one-to-many orthology","type":"exact"}],"termid":"RO:HOM0000034"}


id: MONDO:0016849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Nakajo-Nishimura syndrome (obsolete MONDO:0016849)","termid":"MONDO:0016849","xrefs":{"Monarch":{"xref_id":"0016849"}}}


id: GO:0098542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of another organism that act to protect the cell or organism from damage caused by that organism.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to other organism","secondary_identifiers":["GO:0009814"],"synonyms":[{"name":"defence response incompatible interaction","type":"narrow"},{"name":"defence response to pathogen, incompatible interaction","type":"narrow"},{"name":"defense response, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogen","type":"narrow"}],"termid":"GO:0098542"}


id: FYPO:0004062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of protein phosphorylation is longer than normal during a cellular response to salt stress. All phosphorylation may be affected, or only phosphorylation of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein phosphorylation during cellular response to osmotic stress","termid":"FYPO:0006718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of protein phosphorylation during cellular response to salt stress","synonyms":[{"name":"increased duration of protein phosphorylation during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased duration of protein phosphorylation during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"prolonged protein phosphorylation during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004062"}


id: GO:0048501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of a protein and RNA component which binds the signal sequence of some proteins and facilitates their export to or across the plasma membrane.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal recognition particle","termid":"GO:0048500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"signal recognition particle, plasma membrane targeting","termid":"GO:0048501"}


id: PBO:0000579
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparent S. cerevisiae ortholog (cannot be distinguished)","termid":"PBO:0000579"}


id: GO:0008137
data:
  {"annotated_genes":["SJAG_04152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112649],"is_not":false,"summary":null,"term":"GO:0008137"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + ubiquinone + 5 H+(in) = NAD+ + ubiquinol + 4 H+(out).","definition_xrefs":["RHEA:29091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH dehydrogenase activity","termid":"GO:0003954"},{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","termid":"GO:0016655"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0016491","GO:0003824","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"NADH dehydrogenase (ubiquinone) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:NADH-DEHYDROG-A-RXN","Reactome:R-HSA-163217","EC:7.1.1.2"],"synonyms":[{"name":"DPNH-coenzyme Q reductase activity","type":"related"},{"name":"DPNH-ubiquinone reductase activity","type":"related"},{"name":"NADH coenzyme Q1 reductase activity","type":"related"},{"name":"NADH-CoQ oxidoreductase activity","type":"related"},{"name":"NADH-CoQ reductase activity","type":"related"},{"name":"NADH-Q6 oxidoreductase activity","type":"related"},{"name":"NADH-coenzyme Q oxidoreductase activity","type":"related"},{"name":"NADH-coenzyme Q reductase activity","type":"related"},{"name":"NADH-ubiquinone oxidoreductase activity","type":"related"},{"name":"NADH-ubiquinone reductase activity","type":"related"},{"name":"NADH-ubiquinone-1 reductase activity","type":"related"},{"name":"NADH:ubiquinone oxidoreductase activity","type":"related"},{"name":"NADH:ubiquinone oxidoreductase complex activity","type":"related"},{"name":"coenzyme Q reductase activity","type":"related"},{"name":"complex 1 dehydrogenase activity","type":"related"},{"name":"complex I (NADH:Q1 oxidoreductase) activity","type":"related"},{"name":"complex I (electron transport chain) activity","type":"related"},{"name":"complex I (mitochondrial electron transport) activity","type":"related"},{"name":"dihydronicotinamide adenine dinucleotide-coenzyme Q reductase activity","type":"related"},{"name":"electron transfer complex I activity","type":"related"},{"name":"mitochondrial electron transport complex 1 activity","type":"narrow"},{"name":"mitochondrial electron transport complex I activity","type":"narrow"},{"name":"reduced nicotinamide adenine dinucleotide-coenzyme Q reductase activity","type":"related"},{"name":"type 1 dehydrogenase activity","type":"related"},{"name":"ubiquinone reductase activity","type":"exact"}],"termid":"GO:0008137","terms_by_termid":{"GO:0008137":null}}


id: PBO:0076746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonic family member 1","termid":"PBO:0076746"}


id: GO:0120040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage proliferation.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte proliferation","termid":"GO:0070663"},{"relation_name":"regulates","term_name":"macrophage proliferation","termid":"GO:0061517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage proliferation","termid":"GO:0120040"}


id: PBO:0044446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 24, pseudogene","termid":"PBO:0044446"}


id: PBO:0085688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in recovery from pheromone-induced cell cycle arrest; acts in a Far1p-independent pathway; interacts with Far3p, Far8p, Far9p, Far10p, and Far11p; protein abundance increases in response to DNA replication stress","termid":"PBO:0085688"}


id: PBO:0055483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2916","termid":"PBO:0055483"}


id: GO:2000013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arginine biosynthetic process via ornithine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of arginine metabolic process","termid":"GO:0000821"},{"relation_name":"is_a","term_name":"regulation of ornithine metabolic process","termid":"GO:0090368"},{"relation_name":"is_a","term_name":"regulation of amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"arginine biosynthetic process via ornithine","termid":"GO:0042450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"regulation of arginine biosynthetic process via ornithine","synonyms":[{"name":"regulation of arginine anabolism via ornithine","type":"exact"},{"name":"regulation of arginine formation via ornithine","type":"exact"},{"name":"regulation of arginine synthesis via ornithine","type":"exact"}],"termid":"GO:2000013"}


id: GO:0009421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteinaceous structure at the distal tip of the bacterial-type flagellar filament.","definition_xrefs":["PMID:10572114","GOC:cilia","GOC:mtg_sensu","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum filament","termid":"GO:0009420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum filament cap","synonyms":[{"name":"flagellar filament cap","type":"exact"},{"name":"flagellin-based flagellum filament cap","type":"exact"}],"termid":"GO:0009421"}


id: PBO:0073879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 6","termid":"PBO:0073879"}


id: MONDO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital syphilis that is manifested between 0 and 2 years old.","definition_xrefs":["Wikipedia:Congenital_syphilis#Early"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital syphilis","termid":"MONDO:0005714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early congenital syphilis","secondary_identifiers":["UMLS:C0275859","DOID:0050488","SCTID:4359001","icd11.foundation:108348777","MEDGEN:546894","ICD9:090.2"],"synonyms":[{"name":"Early congenital syphilis (less than 2 years)","type":"broad"}],"termid":"MONDO:0000333","xrefs":{"Monarch":{"xref_id":"0000333"}}}


id: GO:0141067
data:
  {"annotated_genes":["SJAG_03319","SJAG_04637","SJAG_04054","SJAG_00359","SJAG_03266","SJAG_02496","SJAG_04268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94067,117531,71863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[101014,114542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019740"},{"annotations":[113619,70334],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006808"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nitrogen within a cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_02496":null,"SJAG_03266":null,"SJAG_03319":null,"SJAG_04054":null,"SJAG_04268":null,"SJAG_04637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nitrogen homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular nitrogen homeostasis","type":"exact"},{"name":"nitrogen homeostasis","type":"exact"}],"termid":"GO:0141067","terms_by_termid":{"GO:0006808":null,"GO:0019676":null,"GO:0019740":null}}


id: PBO:0040646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain adjacent to zinc finger domain 1B","termid":"PBO:0040646"}


id: MONDO:0006621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Seborrheic keratosis that arises from follicular structures in the vulva. It is characterized by the presence of prominent squamous eddies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted follicular keratosis","termid":"MONDO:0006563"},{"relation_name":"is_a","term_name":"vulvar seborrheic keratosis","termid":"MONDO:0006622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"vulvar inverted follicular keratosis","secondary_identifiers":["MEDGEN:274414","UMLS:C1520084","NCIT:C40291","DOID:6943"],"synonyms":[{"name":"inverted follicular keratosis of mammalian vulva","type":"exact"},{"name":"mammalian vulva inverted follicular keratosis","type":"exact"}],"termid":"MONDO:0006621","xrefs":{"Monarch":{"xref_id":"0006621"}}}


id: PBO:0080571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDFY family member 4","termid":"PBO:0080571"}


id: PBO:0042759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 41","termid":"PBO:0042759"}


id: PBO:0110391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTMR9 pseudogene 1","termid":"PBO:0110391"}


id: PBO:0065148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 1","termid":"PBO:0065148"}


id: MONDO:0018174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary glaucoma is a clinically diverse group of rare eye disorders with genetic predisposition characterized by elevated intraocular pressure (IOP) and glaucomatous changes of the optic nerve head, leading to field defects, visual loss and blindness. Hereditary glaucoma can be sub-classified as primary (congenital glaucoma, juvenile glaucoma) or secondary according to the presence or absence of systemic or other ocular anomalies (iridogoniodysgenesis, Stickler syndrome, Coats syndrome). The clinical presentation is variable and is based on age, severity of glaucoma, presence of ocular abnormalities and development of secondary IOP related abnormalities.","definition_xrefs":["Orphanet:359"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","termid":"MONDO:0015217"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hereditary glaucoma","secondary_identifiers":["UMLS:C3711383","GARD:2486","MEDGEN:777991","MESH:C580055"],"synonyms":[{"name":"glaucoma, hereditary","type":"related"},{"name":"hereditary glaucoma (disease)","type":"exact"}],"termid":"MONDO:0018174","xrefs":{"Monarch":{"xref_id":"0018174"}}}


id: PBO:0058587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6720","termid":"PBO:0058587"}


id: GO:2000766
data:
  {"annotated_genes":["SJAG_03501","SJAG_05000","SJAG_04291","SJAG_00423"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95381,99244,114645,118024],"is_not":false,"summary":null,"term":"GO:2000766"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translation","termid":"GO:2000765"},{"relation_name":"negatively_regulates","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00423":null,"SJAG_03501":null,"SJAG_04291":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"negatively_regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytoplasmic translation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000766","terms_by_termid":{"GO:2000766":null}}


id: MONDO:0971011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class I deficiency","termid":"MONDO:0011476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MHC class I deficiency 2","secondary_identifiers":["MEDGEN:1862135","OMIM:620813","UMLS:C5935617"],"termid":"MONDO:0971011","xrefs":{"Monarch":{"xref_id":"0971011"}}}


id: MONDO:0018772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Joubert syndrome (JS) is characterized by congenital malformation of the brainstem and agenesis or hypoplasia of the cerebellar vermis leading to an abnormal respiratory pattern, nystagmus, hypotonia, ataxia, and delay in achieving motor milestones.","definition_xrefs":["Orphanet:475"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation of the cerebellar vermis (obsolete MONDO:0020130)","termid":"MONDO:0020130"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome","secondary_identifiers":["MEDGEN:98464","UMLS:C0431399","NORD:1312","GARD:6802","NCIT:C74996","OMIMPS:213300","SCTID:716997004","icd11.foundation:1414756318","DOID:0050777"],"synonyms":[{"name":"CPD IV","type":"exact"},{"name":"JBTS","type":"exact"},{"name":"Joubert syndrome","type":"exact"},{"name":"Joubert syndrome type A","type":"exact"},{"name":"Joubert-Boltshauser syndrome","type":"exact"},{"name":"cerebellar vermis agenesis","type":"related"},{"name":"cerebelloparenchymal disorder IV","type":"exact"},{"name":"classic Joubert syndrome","type":"exact"},{"name":"pure Joubert syndrome","type":"exact"}],"termid":"MONDO:0018772","xrefs":{"Monarch":{"xref_id":"0018772"}}}


id: PR:Q9P7C5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7C5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.13c","synonyms":[{"name":"Spom972h-cwf16","type":"exact"},{"name":"complexed with cdc5 protein 16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7C5"}


id: PBO:0042273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 7 pseudogene 2","termid":"PBO:0042273"}


id: PBO:0053087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 1E","termid":"PBO:0053087"}


id: PBO:0005520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex non-SMC subunit Cnd3","termid":"PBO:0005520"}


id: GO:0045016
data:
  {"annotated_genes":["SJAG_02484","SJAG_01639"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77128],"is_not":false,"summary":null,"term":"GO:0045016"},{"annotations":[75306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"}]},"cv_name":"biological_process","definition":"The process in which a magnesium ion (Mg2+) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:ai","PMID:11254124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnesium ion transmembrane transport","termid":"GO:1903830"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01639":null,"SJAG_02484":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mitochondrial magnesium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:1990614"],"synonyms":[{"name":"mitochondrial magnesium ion transport","type":"related"}],"termid":"GO:0045016","terms_by_termid":{"GO:0045016":null,"GO:1990616":null}}


id: PR:Q9US05
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein AATF that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15565:SF0","PRO:DNx","OMA:SCHPO00701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bfr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.08c","secondary_identifiers":["UniProtKB:Q9US05"],"synonyms":[{"name":"Spom972h-AATF","type":"exact"}],"termid":"PR:Q9US05"}


id: MONDO:0957560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hearing loss, noise-induced, susceptibility to","secondary_identifiers":["MEDGEN:414426","UMLS:C2751629","OMIM:613035"],"termid":"MONDO:0957560","xrefs":{"Monarch":{"xref_id":"0957560"}}}


id: MONDO:0011112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Wilms tumor in which the cause of the disease is a mutation in the POU6F2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary Wilms tumor","termid":"MONDO:0003321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"Wilms tumor 5","secondary_identifiers":["MESH:C536707","GARD:15336","MEDGEN:316905","OMIM:601583","UMLS:C1832099"],"synonyms":[{"name":"WT5","type":"related"},{"name":"Wilms tumor 5","type":"exact"},{"name":"Wilms tumor and radial bilateral aplasia","type":"related"},{"name":"Wilms tumor susceptibility-5, autosomal dominant, somatic mutation","type":"exact"},{"name":"Wilms tumor type 5","type":"exact"},{"name":"Wilms tumor, susceptibility to","type":"related"},{"name":"Wilms tumour and radial bilateral aplasia","type":"related"},{"name":"Wilms tumour susceptibility-5, autosomal dominant, somatic mutation","type":"exact"},{"name":"Wilms tumour type 5","type":"exact"},{"name":"bilateral radial aplasia with Wilms tumor","type":"related"},{"name":"bilateral radial aplasia with Wilms tumour","type":"related"}],"termid":"MONDO:0011112","xrefs":{"Monarch":{"xref_id":"0011112"}}}


id: PBO:0111946
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XP-C family","termid":"PBO:0111946"}


id: PBO:0074228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 46 member 2","termid":"PBO:0074228"}


id: GO:0048506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a change in identity of a meristem at a characteristic predetermined time point.","definition_xrefs":["GOC:jid","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of meristem development","termid":"GO:0048509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of meristematic phase transition","termid":"GO:0048506"}


id: GO:0098898
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the dense core granule membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"dense core granule","termid":"GO:0031045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"dense core granule lumen","synonyms":[{"name":"dense core vesicle lumen","type":"exact"}],"termid":"GO:0098898"}


id: PBO:0083511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF DES3/YOR264W","termid":"PBO:0083511"}


id: PBO:0065633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN11 pseudogene 2","termid":"PBO:0065633"}


id: PBO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase complex subunit Erf4 (predicted)","termid":"PBO:0001758"}


id: MONDO:0002451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign neoplasm that arises from the prostate gland and is characterized by the presence of hyperplastic glands and stroma that contains spindle-shaped cells.","definition_xrefs":["NCIT:C5532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign urinary system neoplasm","termid":"MONDO:0004180"},{"relation_name":"is_a","term_name":"prostate phyllodes tumor","termid":"MONDO:0021102"},{"relation_name":"is_a","term_name":"benign neoplasm of prostate","termid":"MONDO:0021510"},{"relation_name":"is_a","term_name":"benign phyllodes tumor","termid":"MONDO:0037002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign prostate phyllodes tumor","secondary_identifiers":["UMLS:C1332535","DOID:2885","MEDGEN:272364"],"synonyms":[{"name":"benign phyllodes neoplasm of prostate","type":"exact"},{"name":"benign phyllodes neoplasm of the prostate","type":"exact"},{"name":"benign phyllodes tumor of prostate","type":"exact"},{"name":"benign phyllodes tumor of the prostate","type":"exact"},{"name":"benign phyllodes tumour of prostate","type":"exact"},{"name":"benign phyllodes tumour of the prostate","type":"exact"},{"name":"benign prostate phyllodes neoplasm","type":"exact"},{"name":"benign prostate phyllodes tumor","type":"exact"},{"name":"phyllodes neoplasm of the prostate","type":"broad"},{"name":"prostate phyllodes tumor","type":"broad"},{"name":"prostate phyllodes tumor, benign","type":"exact"},{"name":"prostate phyllodes tumour","type":"broad"}],"termid":"MONDO:0002451","xrefs":{"Monarch":{"xref_id":"0002451"}}}


id: GO:0034857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-(methylthio)benzothiazole + 1/2 O2 = 2-(methylsulfinyl)benzothiazole.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-(methylthio)benzothiazole monooxygenase activity (obsolete GO:0034857)","termid":"GO:0034857"}


id: GO:0034805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene-trans-11,12-dihydrodiol = 11,12-dihydroxybenzo(a)pyrene + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benzo(a)pyrene-trans-11,12-dihydrodiol dehydrogenase activity (obsolete GO:0034805)","termid":"GO:0034805"}


id: GO:0017154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a semaphorin, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:15239958","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"semaphorin receptor activity","termid":"GO:0017154"}


id: PBO:0087181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A14","termid":"PBO:0087181"}


id: PBO:0077532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 245","termid":"PBO:0077532"}


id: MONDO:0000332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Neorickettsia sennetsu.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ehrlichiosis","termid":"MONDO:0016003"},{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Neorickettsia infectious disease","termid":"MONDO:0024416"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sennetsu fever","secondary_identifiers":["NORD:1703","GARD:120","DOID:0050485","SCTID:21013006","MEDGEN:105459","UMLS:C0520779","ICD9:088.89","MESH:C537582"],"synonyms":[{"name":"Human Ehrlichial infection, sennetsu type","type":"related"},{"name":"Neorickettsia sennetsu caused disease or disorder","type":"exact"},{"name":"Neorickettsia sennetsu disease or disorder","type":"exact"},{"name":"Neorickettsia sennetsu infectious disease","type":"exact"},{"name":"sennetsu ehrlichiosis","type":"related"},{"name":"sennetsu fever","type":"exact"}],"termid":"MONDO:0000332","xrefs":{"Monarch":{"xref_id":"0000332"}}}


id: _global:enabled_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of enables","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enabled_by","secondary_identifiers":["RO:0002333"],"termid":"_global:enabled_by"}


id: PBO:0083811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential RNA-binding component of cleavage and polyadenylation factor; contains five zinc fingers; required for pre-mRNA 3'-end processing and polyadenylation; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0083811"}


id: PBO:0087280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Short open reading frame, shows evidence of translation; may be new protein-coding gene that originated de novo from noncoding sequence; same allele found in at least 33 other S. cerevisiae strains; at least 3 strains have a second allele with three nucleotide substitutions leading to two amino acid differences","termid":"PBO:0087280"}


id: PBO:0041209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 1 pseudogene 1","termid":"PBO:0041209"}


id: PBO:0073314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small EDRK-rich factor 2","termid":"PBO:0073314"}


id: GO:0008242
data:
  {"annotated_genes":["SJAG_03316","SJAG_01612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78364,73461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036374"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of non-standard peptide bonds releasing substituted amino acids such as pyroglutamate or cleave isopeptide bonds, such as many deubiquitinating enzymes.","definition_xrefs":["EC:3.4.19.-","PMID:9920379","PMID:20157488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01612":null,"SJAG_03316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008233","GO:0140096","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"omega peptidase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"peptidase activity, acting on peptides containing modified amino acids","type":"related"}],"termid":"GO:0008242","terms_by_termid":{"GO:0036374":null}}


id: PBO:0074954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-5","termid":"PBO:0074954"}


id: GO:0050257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + riboflavin = D-glucose + FMN.","definition_xrefs":["RHEA:20409","EC:2.7.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"riboflavin phosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R00550","MetaCyc:RIBOFLAVIN-PHOSPHOTRANSFERASE-RXN"],"synonyms":[{"name":"D-glucose-1-phosphate:riboflavin 5'-phosphotransferase activity","type":"related"},{"name":"G-1-P phosphotransferase activity","type":"related"},{"name":"alpha-D-glucose-1-phosphate:riboflavin 5'-phosphotransferase activity","type":"related"},{"name":"riboflavine phosphotransferase activity","type":"related"}],"termid":"GO:0050257"}


id: FYPO:0007638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the anisotropic movement of chromatin occurs to a lower extent than normal during mitosis. Normally, chromatin moves to a lesser extent, and with less freedom of movement direction (i.e. more anisotropically), during mitosis than during interphase.","definition_xrefs":["PomBase:mah","PMID:33434270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin mobility","termid":"FYPO:0007637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased anisotropic motion of mitotic chromatin","synonyms":[{"name":"decreased anisotropic chromatin motion during mitosis","type":"exact"},{"name":"decreased anisotropic chromatin motion during mitotic M phase","type":"related"},{"name":"decreased anisotropic chromatin movement during mitosis","type":"exact"},{"name":"decreased anisotropic mitotic chromatin mobility","type":"exact"},{"name":"decreased anisotropic mitotic chromatin motion","type":"exact"},{"name":"decreased anisotropic motion of mitotic chromatin during vegetative growth","type":"exact"},{"name":"decreased anisotropic movement of mitotic chromatin","type":"exact"},{"name":"reduced anisotropic motion of mitotic chromatin","type":"exact"}],"termid":"FYPO:0007638"}


id: GO:0060084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of communication from a neuron to a smooth muscle in the bladder that contributes to the expulsion of urine from the body.","definition_xrefs":["GOC:dph","PMID:15827347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular synaptic transmission","termid":"GO:0007274"},{"relation_name":"part_of","term_name":"micturition","termid":"GO:0060073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic transmission involved in micturition","synonyms":[{"name":"synaptic transmission involved in urination","type":"related"}],"termid":"GO:0060084"}


id: PBO:0029128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Golgi_apparatus_morphology","termid":"PBO:0029128"}


id: MONDO:0008597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A trichorhinophalangeal syndrome caused by mutations in TRPS1 characterized by the presence of severe brachydactyly, due to short metacarpals, and severe short stature.","definition_xrefs":["PMID:4025405"],"gene_count":0,"genotype_count":0,"name":"obsolete trichorhinophalangeal syndrome, type III (obsolete MONDO:0008597)","secondary_identifiers":["GARD:7802","DOID:0080376","MESH:C566033","OMIM:190351"],"synonyms":[{"name":"Sugio-Kajii syndrome","type":"related"},{"name":"TRPS 3","type":"exact"},{"name":"TRPS3","type":"exact"},{"name":"Trichorhinophalangeal Syndrome Type III","type":"exact"},{"name":"trichorhinophalangeal syndrome type 3","type":"exact"},{"name":"trichorhinophalangeal syndrome, type 3","type":"exact"},{"name":"trichorhinophalangeal syndrome, type III","type":"exact"}],"termid":"MONDO:0008597","xrefs":{"Monarch":{"xref_id":"0008597"}}}


id: PBO:0113102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase involved in rDNA replication and Ty1 transposition; binds to and suppresses DNA damage at G4 motifs in vivo; relieves replication fork pauses at telomeric regions; deletion or inactivation of helicase function suppresses chromosome instability (CIN) associated with centromere or kinetochore defects; structurally and functionally related to Pif1p","termid":"PBO:0113102"}


id: GO:2000721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation (obsolete GO:2000721)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"activation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of smooth muscle cell differentiation","type":"related"},{"name":"positive regulation of transcription from Pol II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global of nonstriated muscle cell differentiation","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global of smooth muscle cell differentiation","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"stimulation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000721"}


id: FYPO:0002293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which cells in the population are viable, and some cells are curved along the long axis.","definition_xrefs":["PomBase:mah","PomBase:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete viable mixed population including curved cells (obsolete FYPO:0002293)","termid":"FYPO:0002293"}


id: GO:0010319
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Thin filamentous structure extending from the surface of all plastid types examined so far, including chloroplast, proplastid, etioplast, leucoplast, amyloplast, and chromoplast. In general, stromules are more abundant in tissues containing non-green plastids, and in cells containing smaller plastids. The primary function of stromules is still unresolved, although the presence of stromules markedly increases the plastid surface area, potentially increasing transport to and from the cytosol. Other functions of stromules, such as transfer of macromolecules between plastids and starch granule formation in cereal endosperm, may be restricted to particular tissues and cell types.","definition_xrefs":["PMID:15699062","PMID:16582010","PMID:15272881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plastid envelope","termid":"GO:0009526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"stromule","secondary_identifiers":["Wikipedia:Stromule"],"synonyms":[{"name":"Stroma-filled tubule","type":"related"}],"termid":"GO:0010319"}


id: PBO:0073975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 31","termid":"PBO:0073975"}


id: PR:O94680
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- plh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid:diacylglycerol acyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.14","synonyms":[{"name":"PDAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-plh1","type":"exact"},{"name":"pombe LRO1 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94680"}


id: GO:0071893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to its receptor on the surface of a target cell, which contributes to nephric duct formation.","definition_xrefs":["GOC:mah","GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in nephric duct formation (obsolete GO:0071893)","synonyms":[{"name":"BMP signalling pathway involved in nephric duct formation","type":"exact"}],"termid":"GO:0071893"}


id: MONDO:0008983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal instability with tissue-specific radiosensitivity","secondary_identifiers":["MESH:C565848","MEDGEN:347797","OMIM:215510","UMLS:C1859091"],"synonyms":[{"name":"chromosomal instability with tissue-specific radiosensitivity","type":"exact"}],"termid":"MONDO:0008983","xrefs":{"Monarch":{"xref_id":"0008983"}}}


id: PBO:0048617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIMAP family P-loop NTPase domain containing 1","termid":"PBO:0048617"}


id: MONDO:0019762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngo-tracheo-esophageal cleft (LC) type 2 is a congenital respiratory tract anomaly characterized by a cleft extending below the vocal folds into the cricoid cartilage, with swallowing disorders and lung infections.","definition_xrefs":["Orphanet:93939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft type 2","secondary_identifiers":["GARD:19237","UMLS:C0584824","MEDGEN:667240"],"synonyms":[{"name":"LTEC II","type":"exact"},{"name":"LTEC2","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft type 2","type":"exact"}],"termid":"MONDO:0019762","xrefs":{"Monarch":{"xref_id":"0019762"}}}


id: PBO:0082951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; binds the drug cyclosporin A; N-terminally propionylated in vivo; protein abundance increases in response to DNA replication stress","termid":"PBO:0082951"}


id: GO:0042895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete antibiotic transmembrane transporter activity (obsolete GO:0042895)","synonyms":[{"name":"antibiotic transporter activity","type":"related"}],"termid":"GO:0042895"}


id: PBO:0063365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 5","termid":"PBO:0063365"}


id: PBO:0090204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP215 microtubule plus end tracking polymerase Alp14","termid":"PBO:0090204"}


id: GO:0030751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + licodione = 2'-O-methyllicodione + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:18521","EC:2.1.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"licodione 2'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:LICODIONE-2-O-METHYLTRANSFERASE-RXN","KEGG_REACTION:R03623"],"synonyms":[{"name":"S-adenosyl-L-methionine:licodione 2'-O-methyltransferase activity","type":"related"}],"termid":"GO:0030751"}


id: PBO:0051013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF2 antisense RNA","termid":"PBO:0051013"}


id: PBO:0089973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex subunit Leo1","termid":"PBO:0089973"}


id: MONDO:0008588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary geniospasm is a movement disorder characterized by episodes of involuntary tremor of the chin and lower lip.","definition_xrefs":["Orphanet:53372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary geniospasm","secondary_identifiers":["GARD:9501","MESH:C537682","OMIM:190100","SCTID:718103001","UMLS:C1860972","MEDGEN:348757"],"synonyms":[{"name":"GSM 1","type":"related"},{"name":"GSM1","type":"related"},{"name":"familial trembling of the chin","type":"exact"},{"name":"geniospasm","type":"related"},{"name":"geniospasm 1","type":"related"},{"name":"hereditary chin myoclonus","type":"exact"},{"name":"hereditary chin tremor/myoclonus","type":"related"},{"name":"hereditary chin-trembling","type":"exact"},{"name":"trembling Chin","type":"related"}],"termid":"MONDO:0008588","xrefs":{"Monarch":{"xref_id":"0008588"}}}


id: GO:0051122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hepoxilins, a class of bioactive icosanoids with roles in the regulation of cell physiology.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"hepoxilin metabolic process","termid":"GO:0051121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"hepoxilin biosynthetic process","synonyms":[{"name":"hepoxilin anabolism","type":"exact"},{"name":"hepoxilin biosynthesis","type":"exact"},{"name":"hepoxilin formation","type":"exact"},{"name":"hepoxilin synthesis","type":"exact"}],"termid":"GO:0051122"}


id: GO:0120274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a virus component, and in cooperation with a nearby primary receptor, initiating a change in cell activity.","definition_xrefs":["GOC:ha","GOC:krc","PMID:16051304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exogenous protein binding","termid":"GO:0140272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"virus coreceptor activity","synonyms":[{"name":"viral coreceptor activity","type":"exact"}],"termid":"GO:0120274"}


id: PBO:0076719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor like 5","termid":"PBO:0076719"}


id: GO:0015634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of lipopolysaccharide from the inside of the cell to the outside of the cell across a membrane. A lipopolysaccharide is any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete lipopolysaccharide exporter activity (obsolete GO:0015634)","synonyms":[{"name":"LPS exporter activity","type":"exact"}],"termid":"GO:0015634"}


id: MOD:01968
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-threonine residue by a thioether bond to form (2R,3R,2'R)-3-methyllanthionine.","definition_xrefs":["PubMed:23314913","RESID:AA0610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-methyllanthionine","termid":"MOD:01981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"(2R,3R,2'R)-3-methyllanthionine","synonyms":[{"name":"(2R,3R)-2-amino-3-([(2R)-2-amino-2-carboxyethyl]sulfanyl)butanoic acid","type":"exact"},{"name":"(2R,3R,2'R)-2-amino-3-[(2-amino-2-carboxyethyl)thio]butanoic acid","type":"exact"},{"name":"(2R,3R,2'R)-3-methyllanthionine","type":"exact"},{"name":"(2R,3R,6R)-2,6-diamino-3-methyl-4-thiaheptanedioic acid","type":"exact"},{"name":"(2R,3R,6R)-3-methyllanthionine","type":"exact"},{"name":"2-azanyl-3-[(2-azanyl-2-carboxyethyl)sulfanyl]butanoic acid","type":"exact"},{"name":"3-methyl-L,L-lanthionine","type":"exact"},{"name":"cysteine-3-L-butyrine thioether","type":"exact"}],"termid":"MOD:01968"}


id: PBO:0085735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in threonylcarbamoyl adenosine biosynthesis; Sua5p and Qri7p are necessary and sufficient for RNA t6A modification in vitro; null mutant lacks N6-threonylcarbamoyl adenosine (t6A) modification in the anticodon loop of ANN-decoding tRNA; member of conserved YrdC/Sua5 family; binds single-stranded telomeric DNA and null mutant has abnormal telomere length","termid":"PBO:0085735"}


id: GO:2001126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translational frameshifting.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational elongation","termid":"GO:0045901"},{"relation_name":"is_a","term_name":"regulation of translational frameshifting","termid":"GO:2001124"},{"relation_name":"positively_regulates","term_name":"translational frameshifting","termid":"GO:0006452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translational frameshifting","termid":"GO:2001126"}


id: FYPO:0004538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more microtubules than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"microtubules present in increased numbers","synonyms":[{"name":"increased level of MTs","type":"exact"},{"name":"microtubules present in greater numbers","type":"exact"},{"name":"microtubules present in increased numbers during mitotic cell cycle","type":"related"},{"name":"microtubules present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004538"}


id: FYPO:0000199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of long tract gene conversion is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gene conversion during vegetative growth","termid":"FYPO:0005788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased long tract gene conversion","synonyms":[{"name":"DNA recombination defects, long tract gene conversion, increased","type":"exact"},{"name":"increased long tract gene conversion during mitotic cell cycle","type":"related"},{"name":"increased long tract gene conversion during vegetative growth","type":"exact"}],"termid":"FYPO:0000199"}


id: PBO:0084457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase in the N-linked glycosylation pathway; catalyzes two consecutive steps in N-linked glycosylation pathway; mutants exhibit temperature-sensitive growth and abnormal accumulation of lipid-linked oligosaccharide Man2GlcNAc2-PP-Dol; mutations of human ALG2 cause congenital myasthenic syndrome; human ALG2 complements temperature sensitivity and dolichol-linked oligosaccharide biosynthesis defect of alg2-1 mutant, but mutant form from a patient with CDG-Ii fails to complement","termid":"PBO:0084457"}


id: GO:0034824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citronellyl-CoA + NAD+ = cis-geranyl-CoA + NADH + H+.","definition_xrefs":["PMID:31964529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"citronellyl-CoA dehydrogenase activity","termid":"GO:0034824"}


id: MONDO:0013184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital Tufting Enteropathy is a rare congenital enteropathy presenting with early-onset severe and intractable diarrhea that leads to irreversible intestinal failure.","definition_xrefs":["Orphanet:92050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital secretory diarrhea","termid":"MONDO:0045032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital diarrhea 5 with tufting enteropathy","secondary_identifiers":["MESH:C567703","GARD:10630","MEDGEN:413031","OMIM:613217","SCTID:715669000","UMLS:C2750737","DOID:0060776"],"synonyms":[{"name":"DIAR5","type":"exact"},{"name":"EPCAM secretory diarrhea","type":"exact"},{"name":"EPCAM secretory diarrhoea","type":"exact"},{"name":"IED","type":"exact"},{"name":"congenital diarrhea 5 with tufting enteropathy","type":"exact"},{"name":"congenital enteropathy","type":"related"},{"name":"congenital familial intractable diarrhea with enterocytes assembly abnormalities","type":"related"},{"name":"congenital familial intractable diarrhea with epithelial or epithelium abnormalities","type":"exact"},{"name":"congenital familial intractable diarrhoea with enterocytes assembly abnormalities","type":"related"},{"name":"congenital familial intractable diarrhoea with epithelial or epithelium abnormalities","type":"exact"},{"name":"congenital tufting enteropathy","type":"exact"},{"name":"diarrhea 5, with tufting enteropathy, congenital","type":"related"},{"name":"diarrhoea 5, with tufting enteropathy, congenital","type":"related"},{"name":"enteropathy, congenital tufting","type":"related"},{"name":"intestinal epithelial cell dysplasia","type":"related"},{"name":"intestinal epithelial dysplasia","type":"exact"},{"name":"secretory diarrhea caused by mutation in EPCAM","type":"exact"},{"name":"secretory diarrhoea caused by mutation in EPCAM","type":"exact"},{"name":"tufting enteropathy","type":"exact"}],"termid":"MONDO:0013184","xrefs":{"Monarch":{"xref_id":"0013184"}}}


id: PBO:0034183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_inhibits","termid":"PBO:0034183"}


id: GO:0030589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of furrows in the cytoplasm between nuclei during cell cycles in embryos that contribute to the formation of the syncytial blastoderm. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudocleavage","termid":"GO:0030588"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pseudocleavage involved in syncytial blastoderm formation","synonyms":[{"name":"pseudocleavage during syncytial blastoderm formation","type":"related"}],"termid":"GO:0030589"}


id: PBO:0114871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps3844","termid":"PBO:0114871"}


id: PBO:0068276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 12 (inactive)","termid":"PBO:0068276"}


id: PBO:0050770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV-1 Tat specific factor 1","termid":"PBO:0050770"}


id: PBO:0074383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG6 nonsense mediated mRNA decay factor","termid":"PBO:0074383"}


id: FYPO:0003157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to the growing cell tip, but then remains there for a longer or shorter time than normal.","definition_xrefs":["PomBase:mah","PMID:24146635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal maintenance of protein location at cell tip during vegetative growth","termid":"FYPO:0005464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal maintenance of protein location at growing cell tip","synonyms":[{"name":"abnormal maintenance of protein localization at growing cell tip","type":"exact"},{"name":"abnormal maintenance of protein location at growing cell end","type":"exact"},{"name":"abnormal maintenance of protein location at growing cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal maintenance of protein location at growing cell tip during vegetative growth","type":"exact"},{"name":"unstable protein localisation to growing cell tip","type":"exact"},{"name":"unstable protein localization to growing cell tip","type":"exact"}],"termid":"FYPO:0003157"}


id: MONDO:0014254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any otofaciocervical syndrome in which the cause of the disease is a mutation in the PAX1 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otofaciocervical syndrome","termid":"MONDO:0008163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otofaciocervical syndrome 2","secondary_identifiers":["MEDGEN:1782278","UMLS:C5442121","GARD:16503","OMIM:615560"],"synonyms":[{"name":"OFC2","type":"related"},{"name":"OTFCS2","type":"related"},{"name":"PAX1 otofaciocervical syndrome","type":"exact"},{"name":"otofaciocervical syndrome 2","type":"exact"},{"name":"otofaciocervical syndrome caused by mutation in PAX1","type":"exact"},{"name":"otofaciocervical syndrome type 2","type":"exact"}],"termid":"MONDO:0014254","xrefs":{"Monarch":{"xref_id":"0014254"}}}


id: GO:1903633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of leucine-tRNA ligase activity.","definition_xrefs":["PMID:2280766","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of leucine-tRNA ligase activity (obsolete GO:1903633)","synonyms":[{"name":"regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"regulation of leucine translase activity","type":"exact"},{"name":"regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1903633"}


id: PBO:0075872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL1 divergent transcript","termid":"PBO:0075872"}


id: MONDO:0006359
data:
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id: PBO:0086375
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl-alcohol dehydrogenase; similar to P. chrysosporium aryl-alcohol dehydrogenase; mutational analysis has not yet revealed a physiological role; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086375"}


id: PBO:0046306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enamelin","termid":"PBO:0046306"}


id: PBO:0040047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 3","termid":"PBO:0040047"}


id: PBO:0079997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 35","termid":"PBO:0079997"}


id: PATO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conductivity quality inhering in motor and sensory nerves by virtue of the bearer's ability to convey electricity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electrical conductivity","termid":"PATO:0001757"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve conductivity","termid":"PATO:0001758"}


id: PBO:0004166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Vps901 (predicted)","termid":"PBO:0004166"}


id: PBO:0043062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion","termid":"PBO:0043062"}


id: GO:0052112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism reduces the flow of fluid within the host xylem, the tissue in plants that carries water and nutrients up from the roots to the shoot and leaves. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:28871268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host anatomical structure","termid":"GO:0052111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated occlusion of host xylem","synonyms":[{"name":"occlusion by symbiont of host xylem","type":"exact"}],"termid":"GO:0052112"}


id: PBO:0088752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex intermodule linker subunit Clr1","termid":"PBO:0088752"}


id: PBO:0091230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane aquaporin family transmembrane transporter","termid":"PBO:0091230"}


id: PBO:0078252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 27","termid":"PBO:0078252"}


id: GO:0031600
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex located in the cytosol of a cell, which caps one or both ends of the proteasome core complex. This complex recognizes, unfolds ubiquitinated proteins and translocates them to the proteasome core complex.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle","termid":"GO:0005838"},{"relation_name":"part_of","term_name":"cytosolic proteasome complex","termid":"GO:0031597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"cytosolic proteasome regulatory particle","termid":"GO:0031600"}


id: MONDO:0004551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of a congenital diverticulum of the lower intestine.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine diverticulitis","termid":"MONDO:0001229"},{"relation_name":"is_a","term_name":"enteritis","termid":"MONDO:0043579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Meckel diverticulitis","secondary_identifiers":["UMLS:C0267497","icd11.foundation:543494453","MEDGEN:75634","SCTID:48241004","DOID:8408","NCIT:C27300"],"synonyms":[{"name":"Meckel diverticulitis","type":"exact"},{"name":"Meckel's diverticulitis","type":"related"},{"name":"Meckel's diverticulum inflammation","type":"exact"},{"name":"inflammation of Meckel's diverticulum","type":"exact"}],"termid":"MONDO:0004551","xrefs":{"Monarch":{"xref_id":"0004551"}}}


id: PBO:0061839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid growth factor receptor pseudogene 1","termid":"PBO:0061839"}


id: PBO:0082607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that binds and regulates Hsp90 family chaperones; plays a role in determining prion variants; important for pp60v-src activity in yeast; homologous to the mammalian p23 proteins, and like p23 can regulate telomerase activity; protein abundance increases in response to DNA replication stress","termid":"PBO:0082607"}


id: PBO:0062783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORAI calcium release-activated calcium modulator 1","termid":"PBO:0062783"}


id: PBO:0042200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin G1","termid":"PBO:0042200"}


id: PBO:0062917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y1","termid":"PBO:0062917"}


id: MONDO:0010563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blue cone monochromatism (BCM) is a recessive X-linked disease characterized by severely impaired color discrimination, low visual acuity, nystagmus, and photophobia, due to dysfunction of the red (L) and green (M) cone photoreceptors. BCM is as an incomplete form of achromatopsia.","definition_xrefs":["Orphanet:16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achromatopsia","termid":"MONDO:0018852"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"},{"relation_name":"is_a","term_name":"X-linked cone-rod dystrophy","termid":"MONDO:0021155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blue cone monochromacy","secondary_identifiers":["GARD:917","MESH:C536238","MEDGEN:87386","SCTID:24704003","DOID:0050679","OMIM:303700","UMLS:C0339537"],"synonyms":[{"name":"BCM","type":"related"},{"name":"CBBM","type":"related"},{"name":"S cone monochromacy","type":"exact"},{"name":"S cone monochromatism","type":"exact"},{"name":"X-chromosome-linked achromatopsia","type":"related"},{"name":"X-linked achromatopsia incomplete","type":"related"},{"name":"X-linked incomplete achromatopsia","type":"exact"},{"name":"achromatopsia incomplete X-linked","type":"related"},{"name":"atypical X-linked achromatopsia","type":"exact"},{"name":"blue cone monochromacy","type":"exact"},{"name":"blue cone monochromacy, X-linked recessive","type":"exact"},{"name":"blue cone monochromatism","type":"exact"},{"name":"color blindness blue mono cone monochromatic type","type":"related"},{"name":"color blindness, blue monocone monochromatic type","type":"exact"},{"name":"colorblindness, blue-Mono-cone-monochromatic type","type":"related"},{"name":"colour blindness blue mono cone monochromatic type","type":"related"},{"name":"colour blindness, blue monocone monochromatic type","type":"exact"},{"name":"cone dystrophy 5, X-linked","type":"related"},{"name":"incomplete achromatopsia X-linked","type":"related"}],"termid":"MONDO:0010563","xrefs":{"Monarch":{"xref_id":"0010563"}}}


id: PBO:0050880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 3","termid":"PBO:0050880"}


id: GO:0042268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cytolysis","termid":"GO:0019835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cytolysis","termid":"GO:0042268"}


id: GO:0034811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-9,10-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:r1132"],"gene_count":0,"genotype_count":0,"name":"obsolete benzo(a)pyrene 9,10-dioxygenase activity (obsolete GO:0034811)","termid":"GO:0034811"}


id: GO:0045493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xylan, a polymer containing a beta-1,4-linked D-xylose backbone.","definition_xrefs":["PMID:11931668","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"},{"relation_name":"is_a","term_name":"hemicellulose catabolic process","termid":"GO:2000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"xylan catabolic process","synonyms":[{"name":"xylan breakdown","type":"exact"},{"name":"xylan catabolism","type":"exact"},{"name":"xylan degradation","type":"exact"}],"termid":"GO:0045493"}


id: GO:1902548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to vascular endothelial growth factor stimulus.","definition_xrefs":["GOC:TermGenie","PMID:17895370","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"is_a","term_name":"regulation of cellular response to vascular endothelial growth factor stimulus","termid":"GO:1902547"},{"relation_name":"negatively_regulates","term_name":"cellular response to vascular endothelial growth factor stimulus","termid":"GO:0035924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to vascular endothelial growth factor stimulus","synonyms":[{"name":"down regulation of cellular response to VEGF","type":"exact"},{"name":"down regulation of cellular response to VEGFA","type":"narrow"},{"name":"down regulation of cellular response to VEGFB","type":"narrow"},{"name":"down regulation of cellular response to vascular endothelial growth factor","type":"exact"},{"name":"down regulation of cellular response to vascular endothelial growth factor stimulus","type":"exact"},{"name":"down-regulation of cellular response to VEGF","type":"exact"},{"name":"down-regulation of cellular response to VEGFA","type":"narrow"},{"name":"down-regulation of cellular response to VEGFB","type":"narrow"},{"name":"down-regulation of cellular response to vascular endothelial growth factor","type":"exact"},{"name":"down-regulation of cellular response to vascular endothelial growth factor stimulus","type":"exact"},{"name":"downregulation of cellular response to VEGF","type":"exact"},{"name":"downregulation of cellular response to VEGFA","type":"narrow"},{"name":"downregulation of cellular response to VEGFB","type":"narrow"},{"name":"downregulation of cellular response to vascular endothelial growth factor","type":"exact"},{"name":"downregulation of cellular response to vascular endothelial growth factor stimulus","type":"exact"},{"name":"inhibition of cellular response to VEGF","type":"narrow"},{"name":"inhibition of cellular response to VEGFA","type":"narrow"},{"name":"inhibition of cellular response to VEGFB","type":"narrow"},{"name":"inhibition of cellular response to vascular endothelial growth factor","type":"narrow"},{"name":"inhibition of cellular response to vascular endothelial growth factor stimulus","type":"narrow"},{"name":"negative regulation of cellular response to VEGF","type":"exact"},{"name":"negative regulation of cellular response to VEGFA","type":"narrow"},{"name":"negative regulation of cellular response to VEGFB","type":"narrow"},{"name":"negative regulation of cellular response to vascular endothelial growth factor","type":"exact"}],"termid":"GO:1902548"}


id: PBO:0079678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3A","termid":"PBO:0079678"}


id: PBO:0088088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose:dolichyl-phosphate glucosyltransferase; involved in asparagine-linked glycosylation in the endoplasmic reticulum; human ortholog ALG5 can partially complement yeast alg5 mutant","termid":"PBO:0088088"}


id: PBO:0031195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-accumulation_of_single-strand_break_sites","termid":"PBO:0031195"}


id: FYPO:0006461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone H2A phosphorylation occurs to a greater extent than normal in telomeric regions during the first meiotic nuclear division. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:19965387","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during meiosis I","termid":"FYPO:0003565"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at telomere during meiosis I","synonyms":[{"name":"increased histone H2A phosphorylation at telomere during first meiotic nuclear division","type":"exact"},{"name":"increased telomeric histone H2A phosphorylation during meiosis I","type":"exact"}],"termid":"FYPO:0006461"}


id: MONDO:0030625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyskinesia with orofacial involvement","termid":"MONDO:0031115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyskinesia with orofacial involvement, autosomal recessive","secondary_identifiers":["OMIM:619647","UMLS:C5562036","MEDGEN:1794246"],"synonyms":[{"name":"DSKOR","type":"exact"},{"name":"dyskinesia with orofacial involvement, autosomal recessive","type":"exact"}],"termid":"MONDO:0030625","xrefs":{"Monarch":{"xref_id":"0030625"}}}


id: PBO:0052765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 57","termid":"PBO:0052765"}


id: PBO:0012522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_specification_of","termid":"PBO:0012522"}


id: PBO:0090728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brix domain protein Rpf1","termid":"PBO:0090728"}


id: PBO:0070657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 28","termid":"PBO:0070657"}


id: GO:0050999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of the enzyme nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nitric-oxide synthase activity","synonyms":[{"name":"NOS regulator","type":"exact"},{"name":"nitric-oxide synthase regulator","type":"exact"},{"name":"regulation of NOS activity","type":"exact"}],"termid":"GO:0050999"}


id: GO:2000927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"regulates","term_name":"cellodextrin catabolic process","termid":"GO:2000890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cellodextrin catabolic process","synonyms":[{"name":"regulation of cellodextrin catabolism","type":"exact"}],"termid":"GO:2000927"}


id: PBO:0114532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule severing ATPase kink, Knk1","termid":"PBO:0114532"}


id: PBO:0029214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-galactose_absent_from_cell_wall","termid":"PBO:0029214"}


id: PBO:0085423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane t-SNARE; involved in fusion of secretory vesicles at the plasma membrane; syntaxin homolog that is functionally redundant with Sso1p; SSO2 has a paralog, SSO1, that arose from the whole genome duplication","termid":"PBO:0085423"}


id: PBO:0081091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC20 intronic transcript 1","termid":"PBO:0081091"}


id: PBO:0081699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 621","termid":"PBO:0081699"}


id: GO:0043407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of MAP kinase activity.","definition_xrefs":["GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAP kinase activity","termid":"GO:0043405"},{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of MAP kinase activity","synonyms":[{"name":"down regulation of MAPK activity","type":"exact"},{"name":"down-regulation of MAPK activity","type":"exact"},{"name":"downregulation of MAPK activity","type":"exact"},{"name":"inhibition of MAPK activity","type":"narrow"},{"name":"negative regulation of mitogen activated protein kinase activity","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase activity","type":"exact"}],"termid":"GO:0043407"}


id: PBO:0056244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium transporter 1","termid":"PBO:0056244"}


id: MONDO:1010237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polymicrogyria that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymicrogyria, non-human animal","secondary_identifiers":["OMIA:001100"],"termid":"MONDO:1010237","xrefs":{"Monarch":{"xref_id":"1010237"}}}


id: PBO:0055037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2452","termid":"PBO:0055037"}


id: GO:0052167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host innate immune response","secondary_identifiers":["GO:0052306"],"synonyms":[{"name":"modulation by organism of innate immune response in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host innate immunity","type":"exact"},{"name":"modulation of host innate immune response","type":"exact"},{"name":"perturbation of host innate immune response","type":"exact"}],"termid":"GO:0052167"}


id: GO:0070029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to osteopontin.","definition_xrefs":["PMID:7532190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphav-beta3 integrin-osteopontin complex","synonyms":[{"name":"ITGAV-ITGB3-SPP1 complex","type":"narrow"}],"termid":"GO:0070029"}


id: MONDO:1012723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctional epidermolysis bullosa that occurs in dogs due to a mutation in the LAMA3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctionalis epidermolysis bullosa, dog","termid":"MONDO:1011548"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional epidermolysis bullosa, LAMA3-related, dog","secondary_identifiers":["OMIA:001677-9615"],"synonyms":[{"name":"epidermolysis bullosa, junctionalis, LAMA3-related, dog","type":"exact"}],"termid":"MONDO:1012723","xrefs":{"Monarch":{"xref_id":"1012723"}}}


id: PBO:0000779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF300 family protein","termid":"PBO:0000779"}


id: FYPO:0007737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitochondrial membrane potential, i.e. the electric potential existing across the mitochondrial membrane, is greater than normal.","definition_xrefs":["GO:0051881","PomBase:mah","PMID:33823662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion","termid":"FYPO:0004943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased mitochondrial membrane potential","synonyms":[{"name":"increased mitochondrial membrane polarization","type":"exact"},{"name":"increased mitochondrial membrane potential during mitotic cell cycle","type":"related"},{"name":"increased mitochondrial membrane potential during vegetative growth","type":"exact"},{"name":"mitochondrial membrane hyperpolarization","type":"related"}],"termid":"FYPO:0007737"}


id: GO:0001873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a polysaccharide and transmitting the signal to initiate an innate immune response. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["PMID:14707091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"polysaccharide immune receptor activity","synonyms":[{"name":"polysaccharide receptor activity","type":"broad"}],"termid":"GO:0001873"}


id: MONDO:0013037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Giacheti syndrome","secondary_identifiers":["OMIM:612917","UMLS:C2752043","MESH:C567864","MEDGEN:414543"],"synonyms":[{"name":"Giacheti syndrome","type":"exact"},{"name":"Marfanoid habitus and specific language and learning disabilities","type":"related"}],"termid":"MONDO:0013037","xrefs":{"Monarch":{"xref_id":"0013037"}}}


id: GO:0035307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of removal of phosphate groups from a protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein dephosphorylation (obsolete GO:0035307)","synonyms":[{"name":"activation of protein amino acid dephosphorylation","type":"narrow"},{"name":"positive regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"stimulation of protein amino acid dephosphorylation","type":"narrow"},{"name":"up regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"up-regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"upregulation of protein amino acid dephosphorylation","type":"exact"}],"termid":"GO:0035307"}


id: PBO:0084635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for synthesis of diphthamide; diphthamide is a modified histidine residue of translation elongation factor 2 (Eft1p or Eft2p); not essential for viability; GFP-Dph5p fusion protein localizes to the cytoplasm","termid":"PBO:0084635"}


id: MONDO:0044647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"kyphosis-lateral tongue atrophy-myofibrillar myopathy syndrome","secondary_identifiers":["MEDGEN:1798876","GARD:17912","Orphanet:496686","UMLS:C5567453"],"termid":"MONDO:0044647","xrefs":{"Monarch":{"xref_id":"0044647"}}}


id: PBO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNS1/SUR4 family protein (predicted)","termid":"PBO:0000242"}


id: GO:0048743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:mtg_muscle","GOC:lm","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue development","termid":"GO:0048643"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle fiber development","termid":"GO:0048742"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"positively_regulates","term_name":"skeletal muscle fiber development","termid":"GO:0048741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle fiber development","synonyms":[{"name":"activation of skeletal muscle fiber development","type":"narrow"},{"name":"positive regulation of skeletal muscle fibre development","type":"exact"},{"name":"positive regulation of skeletal myofiber development","type":"exact"},{"name":"positive regulation of skeletal myofibre development","type":"exact"},{"name":"stimulation of skeletal muscle fiber development","type":"narrow"},{"name":"up regulation of skeletal muscle fiber development","type":"exact"},{"name":"up-regulation of skeletal muscle fiber development","type":"exact"},{"name":"upregulation of skeletal muscle fiber development","type":"exact"}],"termid":"GO:0048743"}


id: PBO:0070507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 6","termid":"PBO:0070507"}


id: MONDO:1012604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in pigs in which there is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme hexosaminidase. It is characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:000403-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, pig","termid":"MONDO:1010842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, pig","synonyms":[{"name":"gangliosidosis, GM2, generic, pig","type":"related"}],"termid":"MONDO:1012604","xrefs":{"Monarch":{"xref_id":"1012604"}}}


id: FYPO:0004352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to methylglyoxal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to methylglyoxal","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to methylglyoxal","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to methylglyoxal during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to methylglyoxal","type":"exact"}],"termid":"FYPO:0004352"}


id: GO:1904755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gut granule assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17535251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"gut granule assembly","termid":"GO:1902900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of gut granule assembly","synonyms":[{"name":"regulation of gut granule biogenesis","type":"exact"},{"name":"regulation of gut granule formation","type":"exact"}],"termid":"GO:1904755"}


id: SO:0000641
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a repeating tetranucleotide sequence (four bases).","direct_ancestors":[{"relation_name":"is_a","term_name":"microsatellite","termid":"SO:0000289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetranucleotide_repeat_microsatellite_feature","synonyms":[{"name":"tetranucleotide repeat microsatellite feature","type":"exact"}],"termid":"SO:0000641"}


id: MONDO:0008743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stimmler syndrome is characterized by the association of microcephaly, low birth weight and severe intellectual deficit with dwarfism, small teeth and diabetes mellitus. Two cases have been described. Biochemical tests reveal the presence of high levels of alanine in the urine and elevated alanine, pyruvate and lactate levels in the blood.","definition_xrefs":["Orphanet:3199"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stimmler syndrome","secondary_identifiers":["OMIM:202900","UMLS:C1859965","MEDGEN:348505","GARD:5026","MESH:C565968","SCTID:733072002"],"synonyms":[{"name":"ALANINURIA with microcephaly, dwarfism, enamel hypoplasia, and diabetes mellitus","type":"related"},{"name":"Alaninuria with microcephaly, dwarfism, enamel hypoplasia and diabetes mellitus","type":"related"},{"name":"Stimmler syndrome","type":"exact"}],"termid":"MONDO:0008743","xrefs":{"Monarch":{"xref_id":"0008743"}}}


id: MONDO:0009141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary dystonia DYT2 type is characterized by segmental dystonia that manifests with involuntary posturing affecting predominantly the feet.","definition_xrefs":["Orphanet:99657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"torsion dystonia 2","secondary_identifiers":["OMIM:224500","MESH:C538006","DOID:0090038","NANDO:1200513","UMLS:C1857093","GARD:2028","NCIT:C123415","MEDGEN:346511"],"synonyms":[{"name":"DYT2","type":"exact"},{"name":"HPCA dystonic disorder","type":"exact"},{"name":"autosomal recessive torsion dystonia 2","type":"exact"},{"name":"dystonia 2, torsion, autosomal recessive","type":"related"},{"name":"dystonia musculorum deformans 2","type":"related"},{"name":"dystonia musculorum deformans type 2","type":"related"},{"name":"dystonic disorder caused by mutation in HPCA","type":"exact"},{"name":"primary dystonia, DYT2 type","type":"related"},{"name":"torsion dystonia 2, autosomal recessive type","type":"related"},{"name":"torsion dystonia type 2","type":"exact"}],"termid":"MONDO:0009141","xrefs":{"Monarch":{"xref_id":"0009141"}}}


id: PBO:0052550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C3","termid":"PBO:0052550"}


id: PBO:0059591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 3","termid":"PBO:0059591"}


id: MONDO:1011910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder, non-human animal","termid":"MONDO:1011365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal dysplasia and bladder aplasia-hypoplasia, non-human animal","secondary_identifiers":["OMIA:000857"],"termid":"MONDO:1011910","xrefs":{"Monarch":{"xref_id":"1011910"}}}


id: GO:0061795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the pH of the Golgi lumen, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:dph","PMID:23447592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular pH reduction","termid":"GO:0051452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Golgi lumen acidification","synonyms":[{"name":"Golgi apparatus lumen acidification","type":"exact"}],"termid":"GO:0061795"}


id: MONDO:0024182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"beriberi","termid":"MONDO:0006676"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dry beriberi","secondary_identifiers":["icd11.foundation:582233757","MEDGEN:541401","UMLS:C0268670","DOID:0070318"],"synonyms":[{"name":"endemic neuritis","type":"related"}],"termid":"MONDO:0024182","xrefs":{"Monarch":{"xref_id":"0024182"}}}


