# terms

id: MONDO:0009716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Richieri Costa-da Silva syndrome","secondary_identifiers":["Orphanet:3101","MESH:C535675","MEDGEN:419686","GARD:4709","UMLS:C2930978","OMIM:255710"],"synonyms":[{"name":"Richieri Costa Da Silva syndrome","type":"related"},{"name":"myotonia with skeletal abnormalities and intellectual disability","type":"related"},{"name":"myotonia with skeletal abnormalities and mental retardation","type":"related"},{"name":"myotonia-intellectual disability-skeletal anomalies syndrome","type":"exact"}],"termid":"MONDO:0009716","xrefs":{"Monarch":{"xref_id":"0009716"}}}


id: PBO:0082767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the sorting and assembly machinery (SAM) complex; the SAM (or TOB) complex is located in the mitochondrial outer membrane; the complex binds precursors of beta-barrel proteins and facilitates their insertion into the outer membrane","termid":"PBO:0082767"}


id: GO:0033070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of ansamycins, any of a group of complex macrolactam compounds characterized by a cyclic structure in which an aliphatic ansa chain forms a bridge between two non-adjacent positions of a cyclic p-system; many exhibit antibacterial, antifungal or antitumor activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ansamycin metabolic process","termid":"GO:0033069"},{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"ansamycin biosynthetic process","synonyms":[{"name":"ansamycin anabolism","type":"exact"},{"name":"ansamycin biosynthesis","type":"exact"},{"name":"ansamycin formation","type":"exact"},{"name":"ansamycin synthesis","type":"exact"}],"termid":"GO:0033070"}


id: PBO:0052616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kringle containing transmembrane protein 1","termid":"PBO:0052616"}


id: FYPO:0006302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which changes in contacts within a chromosome arm that normally take place during mitosis do not occur.","definition_xrefs":["PMID:28825727","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000337","FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abolished intra-arm chromosome contact change during mitosis","synonyms":[{"name":"abolished changes in intra-arm contacts in mitosis","type":"exact"},{"name":"abolished intra-arm chromosome contact change during M phase of mitotic cell cycle","type":"related"},{"name":"abolished intra-arm chromosome contact change during mitosis during vegetative growth","type":"exact"},{"name":"intra-arm chromosome contact change abolished during mitosis","type":"exact"}],"termid":"FYPO:0006302"}


id: PBO:0004208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-TEFB associated cyclin, cyclin T Pch1","termid":"PBO:0004208"}


id: PBO:0086129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086129"}


id: GO:1900898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heptadecane biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heptadecane biosynthetic process","termid":"GO:1900896"},{"relation_name":"is_a","term_name":"positive regulation of heptadecane metabolic process","termid":"GO:1900901"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"positively_regulates","term_name":"heptadecane biosynthetic process","termid":"GO:1900636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heptadecane biosynthetic process","synonyms":[{"name":"activation of heptadecane anabolism","type":"narrow"},{"name":"activation of heptadecane biosynthesis","type":"narrow"},{"name":"activation of heptadecane biosynthetic process","type":"narrow"},{"name":"activation of heptadecane formation","type":"narrow"},{"name":"activation of heptadecane synthesis","type":"narrow"},{"name":"positive regulation of heptadecane anabolism","type":"related"},{"name":"positive regulation of heptadecane biosynthesis","type":"related"},{"name":"positive regulation of heptadecane formation","type":"related"},{"name":"positive regulation of heptadecane synthesis","type":"related"},{"name":"up regulation of heptadecane anabolism","type":"related"},{"name":"up regulation of heptadecane biosynthesis","type":"related"},{"name":"up regulation of heptadecane biosynthetic process","type":"exact"},{"name":"up regulation of heptadecane formation","type":"related"},{"name":"up regulation of heptadecane synthesis","type":"related"},{"name":"up-regulation of heptadecane anabolism","type":"related"},{"name":"up-regulation of heptadecane biosynthesis","type":"related"},{"name":"up-regulation of heptadecane biosynthetic process","type":"exact"},{"name":"up-regulation of heptadecane formation","type":"related"},{"name":"up-regulation of heptadecane synthesis","type":"related"},{"name":"upregulation of heptadecane anabolism","type":"related"},{"name":"upregulation of heptadecane biosynthesis","type":"related"},{"name":"upregulation of heptadecane biosynthetic process","type":"exact"},{"name":"upregulation of heptadecane formation","type":"related"},{"name":"upregulation of heptadecane synthesis","type":"related"}],"termid":"GO:1900898"}


id: GO:0106106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which heat is generated by increasing metabolism in response to cold ambient temperatures in order to maintain a stable core body temperature.","definition_xrefs":["PMID:27876809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature homeostasis","termid":"GO:0001659"},{"relation_name":"is_a","term_name":"adaptive thermogenesis","termid":"GO:1990845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cold-induced thermogenesis","synonyms":[{"name":"CIT","type":"related"}],"termid":"GO:0106106"}


id: PBO:0051152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-32 (pseudogene)","termid":"PBO:0051152"}


id: PBO:0109455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1341, pseudogene","termid":"PBO:0109455"}


id: GO:0043886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a carboxysome shell, an organelle found in all cyanobacteria and some chemoautotrophs, consisting of a proteinaceous coat and enzymes for the fixation of CO2.","definition_xrefs":["PMID:28934381","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of carboxysome shell","synonyms":[{"name":"structural constituent of carboxysome","type":"related"}],"termid":"GO:0043886"}


id: PBO:0030319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_oleoyl-CoA_ligase_activity","termid":"PBO:0030319"}


id: GO:0061703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an assemble of ASC dimers that is capable of inducing pyroptosis.","definition_xrefs":["GOC:dph","PMID:17599095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pyroptosome complex","synonyms":[{"name":"ASC pyroptosome","type":"exact"}],"termid":"GO:0061703"}


id: PBO:0064017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 51","termid":"PBO:0064017"}


id: PBO:0013038
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae TPP1","termid":"PBO:0013038"}


id: GO:0016226
data:
  {"annotated_genes":["SJAG_00455","SJAG_00532","SJAG_02895","SJAG_02306","SJAG_00894","SJAG_00186","SJAG_02497","SJAG_03862","SJAG_00972","SJAG_03222","SJAG_04016","SJAG_01615","SJAG_01238","SJAG_03701","SJAG_04397","SJAG_02994","SJAG_01063","SJAG_02866","SJAG_00066","SJAG_02457","SJAG_04014","SJAG_01417"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57131,59028,68351,78744,89061],"is_not":false,"summary":null,"term":"GO:0016226"},{"annotations":[113662,92757,92988,77969,99045,102902,109669,67588,98061,109474,101407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044571"},{"annotations":[109656,92575,101408,117651,109044,88009,98735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044572"}]},"cv_name":"biological_process","definition":"The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:jl","GOC:vw","GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallo-sulfur cluster assembly","termid":"GO:0031163"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00066":null,"SJAG_00186":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_00972":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_01417":null,"SJAG_01615":null,"SJAG_02306":null,"SJAG_02457":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04014":null,"SJAG_04016":null,"SJAG_04397":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"iron-sulfur cluster assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1362409","Reactome:R-HSA-2564830"],"synonyms":[{"name":"iron-sulfur cluster biosynthesis","type":"related"},{"name":"iron-sulphur cluster assembly","type":"exact"}],"termid":"GO:0016226","terms_by_termid":{"GO:0016226":null,"GO:0044571":null,"GO:0044572":null}}


id: PBO:0078545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM36 intronic transcript 1","termid":"PBO:0078545"}


id: PBO:0080441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VRK serine/threonine kinase 2","termid":"PBO:0080441"}


id: PBO:0081733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 664","termid":"PBO:0081733"}


id: PBO:0029484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_curved_cells_(obsolete_FYPO:0002231)","termid":"PBO:0029484"}


id: PBO:0042218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin P","termid":"PBO:0042218"}


id: GO:2000975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphoid progenitor cell differentiation","termid":"GO:1905458"},{"relation_name":"is_a","term_name":"regulation of pro-B cell differentiation","termid":"GO:2000973"},{"relation_name":"positively_regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pro-B cell differentiation","synonyms":[{"name":"positive regulation of pro-B cell development","type":"related"},{"name":"positive regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000975"}


id: GO:0070740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the posttranslational transfer of one or more glutamate residues to the gamma-carboxyl group(s) of one or more specific glutamate residues on a tubulin molecule.","definition_xrefs":["PMID:19524510","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"tubulin-glutamic acid ligase activity","secondary_identifiers":["EC:6.3.2.61","Reactome:R-HSA-8865774","Reactome:R-HSA-8955869"],"synonyms":[{"name":"tubulin glutamylase activity","type":"exact"},{"name":"tubulin-glutamate ligase activity","type":"exact"}],"termid":"GO:0070740"}


id: FYPO:0006227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the plasma membrane potential, i.e. the electric potential existing across the plasma membrane, is abnormal.","definition_xrefs":["PomBase:mah","PMID:16164595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal plasma membrane potential","synonyms":[{"name":"abnormal plasma membrane polarization","type":"exact"},{"name":"abnormal plasma membrane potential during mitotic cell cycle","type":"related"},{"name":"abnormal plasma membrane potential during vegetative growth","type":"exact"}],"termid":"FYPO:0006227"}


id: PBO:0051505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of nuclear factor kappa B kinase subunit beta","termid":"PBO:0051505"}


id: GO:1902839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear migration along microtubule.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of nuclear migration along microtubule","termid":"GO:1902838"},{"relation_name":"negatively_regulates","term_name":"nuclear migration along microtubule","termid":"GO:0030473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclear migration along microtubule","synonyms":[{"name":"down regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"down regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"down regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"down regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"down regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"down regulation of nuclear migration along microtubule","type":"exact"},{"name":"down regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"down regulation of transport of nucleus by microtubules","type":"exact"},{"name":"down regulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"down-regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"down-regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"down-regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"down-regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"down-regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"down-regulation of nuclear migration along microtubule","type":"exact"},{"name":"down-regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"down-regulation of transport of nucleus by microtubules","type":"exact"},{"name":"down-regulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"downregulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"downregulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"downregulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"downregulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"downregulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"downregulation of nuclear migration along microtubule","type":"exact"},{"name":"downregulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"downregulation of transport of nucleus by microtubules","type":"exact"},{"name":"downregulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"inhibition of microtubule cytoskeleton-dependent nuclear positioning","type":"narrow"},{"name":"inhibition of microtubule cytoskeleton-dependent nucleus positioning","type":"narrow"},{"name":"inhibition of microtubule-dependent nuclear positioning","type":"narrow"},{"name":"inhibition of microtubule-dependent nucleus positioning","type":"narrow"},{"name":"inhibition of microtubule-mediated nuclear migration","type":"narrow"},{"name":"inhibition of nuclear migration along microtubule","type":"narrow"},{"name":"inhibition of nuclear migration, microtubule-mediated","type":"narrow"},{"name":"inhibition of transport of nucleus by microtubules","type":"narrow"},{"name":"inhibition of transport of nucleus, microtubule-mediated","type":"narrow"},{"name":"negative regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"negative regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"negative regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"negative regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"negative regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"negative regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"negative regulation of transport of nucleus by microtubules","type":"exact"},{"name":"negative regulation of transport of nucleus, microtubule-mediated","type":"exact"}],"termid":"GO:1902839"}


id: GO:0095500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an acetylcholine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic signal transduction","termid":"GO:0098926"},{"relation_name":"part_of","term_name":"cellular response to acetylcholine","termid":"GO:1905145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"acetylcholine receptor signaling pathway","synonyms":[{"name":"acetylcholine receptor signalling pathway","type":"exact"}],"termid":"GO:0095500"}


id: FYPO:0006071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more adenylyl residues to the 3' end of a small RNA (sRNA) molecule occurs to a lower extent than normal.","definition_xrefs":["PMID:28541282","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased small RNA 3' adenylation","synonyms":[{"name":"decreased sRNA 3' adenylation","type":"exact"},{"name":"decreased small RNA 3' adenylation during mitotic cell cycle","type":"related"},{"name":"decreased small RNA 3' adenylation during vegetative growth","type":"exact"},{"name":"decreased small regulatory RNA 3' adenylation","type":"exact"},{"name":"reduced small RNA 3' adenylation","type":"exact"}],"termid":"FYPO:0006071"}


id: FYPO:0006658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of acid phosphatase activity is decreased during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased acid phosphatase activity","termid":"FYPO:0001045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased acid phosphatase activity during cellular response to phosphate starvation","synonyms":[{"name":"reduced acid phosphatase activity during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0006658"}


id: GO:0042386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the characteristics of a mature hemocyte. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen.","definition_xrefs":["GOC:mtg_sensu","PMID:9550723","CL:0000387","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemocyte differentiation","synonyms":[{"name":"arthropod blood cell differentiation","type":"exact"}],"termid":"GO:0042386"}


id: MONDO:0002050
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melancholy feeling of sadness and despair.","definition_xrefs":["NCIT:C2982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mood disorder","termid":"MONDO:0005371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depressive disorder","secondary_identifiers":["MEDGEN:4229","ICD10CM:F32","UMLS:C0011581","DOID:1596","MESH:D003866","MFOMD:0000013","SCTID:35489007","ICD9:311"],"synonyms":[{"name":"depression","type":"exact"},{"name":"melancholia","type":"related"},{"name":"melancholias","type":"related"},{"name":"mental depression","type":"exact"},{"name":"syndrome, depressive","type":"related"},{"name":"syndromes, depressive","type":"related"}],"termid":"MONDO:0002050","xrefs":{"Monarch":{"xref_id":"0002050"}}}


id: PBO:0061273
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOX4 pseudogene 1","termid":"PBO:0061273"}


id: MONDO:0004573
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dietary deficiency of riboflavin causing a syndrome chiefly marked by cheilitis, angular stomatitis, glossitis associated with a purplish red or magenta-colored tongue that may show fissures, corneal vascularization, dyssebacia, and anemia. (Dorland, 27th ed)","definition_xrefs":["MESH:D012257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ariboflavinosis","secondary_identifiers":["DOID:8454","ICD9:266.0","MEDGEN:1830329","SCTID:20307000","UMLS:C5779638","OMIM:615026"],"synonyms":[{"name":"riboflavin deficiency","type":"exact"},{"name":"vitamin B2 deficiency","type":"exact"}],"termid":"MONDO:0004573","xrefs":{"Monarch":{"xref_id":"0004573"}}}


id: SO:0001079
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Motif is a three-dimensional structural element within the chain, which appears also in a variety of other molecules. Unlike a domain, a motif does not need to form a stable globular unit.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_structural_motif","secondary_identifiers":["http://en.wikipedia.org/wiki/Structural_motif","BS:0000338"],"synonyms":[{"name":"polypeptide structural motif","type":"related"},{"name":"structural_motif","type":"related"}],"termid":"SO:0001079"}


id: GO:0010371
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id: MONDO:1012060
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id: MONDO:0014988
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 3-methylglutaconic aciduria, type VIII (obsolete MONDO:0014988)","termid":"MONDO:0014988","xrefs":{"Monarch":{"xref_id":"0014988"}}}


id: MONDO:0003649
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low or intermediate grade tumor with neuroendocrine differentiation that arises from the esophagus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system neuroendocrine tumor, grade 1/2","termid":"MONDO:0000386"},{"relation_name":"is_a","term_name":"neoplasm of esophagus","termid":"MONDO:0021355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal neuroendocrine tumor","secondary_identifiers":["UMLS:C2987260","GARD:22058","MEDGEN:459486","NCIT:C95616","DOID:5784","Orphanet:506136"],"synonyms":[{"name":"NEN of esophagus","type":"exact"},{"name":"NEN of oesophagus","type":"exact"},{"name":"esophageal NEN","type":"exact"},{"name":"esophageal NET","type":"exact"},{"name":"esophageal neuroendocrine neoplasm","type":"exact"},{"name":"esophageal neuroendocrine tumor","type":"exact"},{"name":"esophageal well differentiated endocrine tumor","type":"exact"},{"name":"esophageal well differentiated endocrine tumor/carcinoma","type":"exact"},{"name":"esophageal well differentiated endocrine tumour","type":"exact"},{"name":"esophagus NET","type":"exact"},{"name":"esophagus neuroendocrine neoplasm","type":"exact"},{"name":"esophagus neuroendocrine tumor","type":"exact"},{"name":"esophagus neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"neuroendocrine neoplasm of esophagus","type":"exact"},{"name":"neuroendocrine neoplasm of oesophagus","type":"exact"},{"name":"neuroendocrine tumor of esophagus","type":"exact"},{"name":"neuroendocrine tumour of oesophagus","type":"exact"},{"name":"oesophagus NET","type":"exact"},{"name":"oesophagus neuroendocrine neoplasm","type":"exact"},{"name":"oesophagus neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"oesophagus neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0003649","xrefs":{"Monarch":{"xref_id":"0003649"}}}


id: PR:O94435
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug35 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 35 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.01c","synonyms":[{"name":"Spom972h-mug35","type":"exact"}],"termid":"PR:O94435"}


id: GO:0010249
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving auxin conjugates, a bound form of auxin.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auxin conjugate metabolic process","synonyms":[{"name":"auxin conjugate metabolism","type":"exact"}],"termid":"GO:0010249"}


id: GO:0046982
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nonidentical protein to form a heterodimer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dimerization activity","termid":"GO:0046983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"protein heterodimerization activity","termid":"GO:0046982"}


id: GO:0061612
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways in which galactose, the aldohexose galacto-hexose, is converted to glucose-1-phosphate.","definition_xrefs":["GOC:dph","ISBN:0201090910","ISBN:0879010479"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose to glucose-1-phosphate metabolic process (obsolete GO:0061612)","termid":"GO:0061612"}


id: PBO:0065315
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 38","termid":"PBO:0065315"}


id: PBO:0073162
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC62 antisense RNA 1","termid":"PBO:0073162"}


id: MONDO:0004335
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id: MONDO:0013307
data:
  {"annotated_genes":["SJAG_04473"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87041],"is_not":false,"summary":null,"term":"MONDO:0013307"}]},"cv_name":"mondo","definition":"Any mitochondrial myopathy and sideroblastic anemia in which the cause of the disease is a mutation in the YARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy, lactic acidosis, and sideroblastic anemia","termid":"MONDO:0000863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04473":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0004069","MONDO:0002280","MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"myopathy, lactic acidosis, and sideroblastic anemia 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462152","UMLS:C3150802","DOID:0111186","OMIM:613561","GARD:15676"],"synonyms":[{"name":"MLASA2","type":"related"},{"name":"YARS2 mitochondrial myopathy and sideroblastic anaemia","type":"exact"},{"name":"YARS2 mitochondrial myopathy and sideroblastic anemia","type":"exact"},{"name":"mitochondrial myopathy and sideroblastic anaemia caused by mutation in YARS2","type":"exact"},{"name":"mitochondrial myopathy and sideroblastic anemia caused by mutation in YARS2","type":"exact"},{"name":"myopathy, lactic acidosis, and sideroblastic Anaemia type 2","type":"exact"},{"name":"myopathy, lactic acidosis, and sideroblastic Anemia type 2","type":"exact"},{"name":"myopathy, lactic acidosis, and sideroblastic anemia 2","type":"exact"}],"termid":"MONDO:0013307","terms_by_termid":{"MONDO:0013307":null},"xrefs":{"Monarch":{"xref_id":"0013307"}}}


id: GO:0018629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quinolin-2-ol + NADH + H+ + O2 = 2,5,6-trihydroxy-5,6-dihydroquinoline + NAD+.","definition_xrefs":["EC:1.14.12.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyquinoline 5,6-dioxygenase activity","secondary_identifiers":["RHEA:10976","UM-BBD_reactionID:r0052","MetaCyc:1.14.12.16-RXN"],"synonyms":[{"name":"2-oxo-1,2-dihydroquinoline 5,6-dioxygenase activity","type":"exact"},{"name":"quinolin-2(1H)-one 5,6-dioxygenase activity","type":"related"},{"name":"quinolin-2-ol 5,6-dioxygenase activity","type":"related"},{"name":"quinolin-2-ol,NADH:oxygen oxidoreductase (5,6-hydroxylating)","type":"related"}],"termid":"GO:0018629"}


id: MONDO:0019756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lobar holoprosencephaly is the mildest classical form of holoprosencephaly (HPE) characterized by separation of the right and left cerebral hemispheres and lateral ventricules with some continuity across the frontal neocortex, especially rostrally and ventrally.","definition_xrefs":["Orphanet:93924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lobar holoprosencephaly","secondary_identifiers":["UMLS:C0431362","SCTID:253136007","GARD:16830","icd11.foundation:121649206","MEDGEN:96559"],"termid":"MONDO:0019756","xrefs":{"Monarch":{"xref_id":"0019756"}}}


id: PBO:0050319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 21","termid":"PBO:0050319"}


id: PBO:0075552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPEG neighbor","termid":"PBO:0075552"}


id: PBO:0068599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 50, pseudogene","termid":"PBO:0068599"}


id: GO:0060367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the sagittal suture is generated and organized.","definition_xrefs":["GOC:sl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial suture morphogenesis","termid":"GO:0060363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sagittal suture morphogenesis","termid":"GO:0060367"}


id: GO:0072208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of smooth muscle in the metanephros over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney smooth muscle tissue development","termid":"GO:0072194"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric smooth muscle tissue development","termid":"GO:0072208"}


id: PBO:0028081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_specific_nuclear_polyadenylated_mRNA_level_during_vegetative_growth","termid":"PBO:0028081"}


id: MONDO:0008032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant limb-girdle muscular dystrophy type 1A (obsolete MONDO:0008032)","termid":"MONDO:0008032","xrefs":{"Monarch":{"xref_id":"0008032"}}}


id: MONDO:0043108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile striato thalamic degeneration","secondary_identifiers":["GARD:3004","Orphanet:1575"],"termid":"MONDO:0043108","xrefs":{"Monarch":{"xref_id":"0043108"}}}


id: GO:0070500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving poly-gamma-glutamate, a polymer of D- and/or L-glutamic acid residues linked by gamma-peptidyl bonds.","definition_xrefs":["PMID:16689787","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete poly-gamma-glutamate metabolic process (obsolete GO:0070500)","synonyms":[{"name":"poly-gamma-glutamate metabolism","type":"exact"}],"termid":"GO:0070500"}


id: PR:Q92349
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo7 gene.","definition_xrefs":["UniProtKB:Q92349","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 79 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.04","synonyms":[{"name":"Spom972h-spo7","type":"exact"}],"termid":"PR:Q92349"}


id: MONDO:0009281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glutaryl-CoA dehydrogenase (GCDH) deficiency (GDD) is an autosomal recessive neurometabolic disorder clinically characterized by encephalopathic crises resulting in striatal injury and a severe dystonic dyskinetic movement disorder.","definition_xrefs":["Orphanet:25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutaric aciduria","termid":"MONDO:0000129"},{"relation_name":"is_a","term_name":"inborn organic aciduria","termid":"MONDO:0000688"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"glutaryl-CoA dehydrogenase deficiency","secondary_identifiers":["ICD10CM:E72.3","MESH:C536833","NCIT:C99101","GARD:6522","OMIM:231670","NANDO:2200501","NANDO:1200800","DOID:0111254","SCTID:76175005","UMLS:C0268595","MEDGEN:124337"],"synonyms":[{"name":"GA1","type":"exact"},{"name":"GCDHD","type":"exact"},{"name":"Ga 1","type":"related"},{"name":"glutaric acidemia 1","type":"related"},{"name":"glutaric acidemia I","type":"related"},{"name":"glutaric acidemia type 1","type":"exact"},{"name":"glutaric acidemia type I","type":"related"},{"name":"glutaric acidemia, type 1","type":"related"},{"name":"glutaric aciduria 1","type":"related"},{"name":"glutaric aciduria type 1","type":"exact"},{"name":"glutaric aciduria type I","type":"related"},{"name":"glutaric aciduria, type 1","type":"exact"},{"name":"glutaricaciduria, type I","type":"exact"},{"name":"glutaryl-CoA dehydrogenase deficiency","type":"exact"},{"name":"glutaryl-coenzyme A dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0009281","xrefs":{"Monarch":{"xref_id":"0009281"}}}


id: SO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleic acid sequence that when read as sequential triplets, has the potential of encoding a sequential string of amino acids. It need not contain the start or stop codon.","definition_xrefs":["SGD:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reading_frame","secondary_identifiers":["http://en.wikipedia.org/wiki/Reading_frame"],"synonyms":[{"name":"reading frame","type":"exact"}],"termid":"SO:0000717"}


id: PBO:0058527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6072","termid":"PBO:0058527"}


id: PBO:0042385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300a molecule","termid":"PBO:0042385"}


id: GO:0032683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"negatively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045421"],"synonyms":[{"name":"down regulation of connective tissue growth factor production","type":"exact"},{"name":"down-regulation of connective tissue growth factor production","type":"exact"},{"name":"downregulation of connective tissue growth factor production","type":"exact"},{"name":"inhibition of connective tissue growth factor production","type":"narrow"},{"name":"negative regulation of CCN2 production","type":"exact"},{"name":"negative regulation of CTGF production","type":"exact"},{"name":"negative regulation of Fisp12 production","type":"exact"},{"name":"negative regulation of Hcs24 production","type":"exact"},{"name":"negative regulation of IGFBP8 production","type":"exact"},{"name":"negative regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"negative regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"}],"termid":"GO:0032683"}


id: GO:0070125
data:
  {"annotated_genes":["SJAG_03461","SJAG_05271","SJAG_02353","SJAG_04351"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73355,79793,79829,91782],"is_not":false,"summary":null,"term":"GO:0070125"}]},"cv_name":"biological_process","definition":"The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"part_of","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02353":null,"SJAG_03461":null,"SJAG_04351":null,"SJAG_05271":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0140053","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial translational elongation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5389840"],"synonyms":[{"name":"mitochondrial translation elongation","type":"exact"}],"termid":"GO:0070125","terms_by_termid":{"GO:0070125":null}}


id: GO:0097158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pyrimidine-rich (CU-rich) intronic sequence of a pre-messenger RNA (pre-mRNA).","definition_xrefs":["GOC:ans","PMID:16777844","PMID:16260624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-mRNA intronic binding","termid":"GO:0097157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"pre-mRNA intronic pyrimidine-rich binding","synonyms":[{"name":"pre-messenger RNA intronic pyrimidine-rich binding","type":"exact"}],"termid":"GO:0097158"}


id: MONDO:0100245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acquired paroxysmal nocturnal hemoglobinuria (obsolete MONDO:0100245)","termid":"MONDO:0100245","xrefs":{"Monarch":{"xref_id":"0100245"}}}


id: PR:Q10166
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An omega-amidase NIT2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase C26A3.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.11","secondary_identifiers":["UniProtKB:Q10166"],"synonyms":[{"name":"Spom972h-NIT2","type":"exact"}],"termid":"PR:Q10166"}


id: PBO:0116796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRK antisense RNA 1","termid":"PBO:0116796"}


id: MONDO:0030317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial hypertrophic, 28","secondary_identifiers":["UMLS:C5543616","MEDGEN:1779612","OMIM:619402"],"synonyms":[{"name":"CMH28","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 28","type":"exact"}],"termid":"MONDO:0030317","xrefs":{"Monarch":{"xref_id":"0030317"}}}


id: PBO:0004147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human mitofilin ortholog (predicted)","termid":"PBO:0004147"}


id: GO:1904237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of substrate-dependent cell migration, cell attachment to substrate.","definition_xrefs":["PMID:25834989","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-substrate adhesion","termid":"GO:0010811"},{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of substrate-dependent cell migration, cell attachment to substrate","termid":"GO:1904235"},{"relation_name":"positively_regulates","term_name":"substrate-dependent cell migration, cell attachment to substrate","termid":"GO:0006931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"activation of substrate-bound cell migration, cell attachment to substrate","type":"narrow"},{"name":"activation of substrate-dependent cell migration, cell attachment to substrate","type":"narrow"},{"name":"positive regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"up regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"up regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"up-regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"up-regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"upregulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"upregulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:1904237"}


id: GO:2000904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of starch metabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"starch metabolic process","termid":"GO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of starch metabolic process","synonyms":[{"name":"regulation of starch metabolism","type":"exact"}],"termid":"GO:2000904"}


id: PBO:0109362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 1B","termid":"PBO:0109362"}


id: MONDO:0009659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive lysosomal storage disease caused by deficiency of the enzyme galactosamine-6-sulfatase. It is characterized by skeletal and central nervous system deficits.","definition_xrefs":["NCIT:C84901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 4","termid":"MONDO:0018938"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0002561"],"is_obsolete":false,"name":"mucopolysaccharidosis type 4A","secondary_identifiers":["OMIM:253000","UMLS:C0086651","Orphanet:309297","SCTID:7259005","NANDO:2201178","NANDO:1200106","DOID:0111391","icd11.foundation:1919173641","GARD:3785","MEDGEN:43375"],"synonyms":[{"name":"GALNS deficiency","type":"exact"},{"name":"MPS 4A","type":"related"},{"name":"MPS IV A","type":"exact"},{"name":"MPS IVA","type":"related"},{"name":"MPS4A","type":"exact"},{"name":"MPSIVA","type":"exact"},{"name":"Morquio A disease","type":"broad"},{"name":"Morquio disease type A","type":"exact"},{"name":"Morquio syndrome A","type":"exact"},{"name":"N-acetylgalactosamine-6-sulfate sulfatase deficiency","type":"exact"},{"name":"galactosamine-6-sulfatase deficiency","type":"exact"},{"name":"mucopolysaccharidosis IVA","type":"exact"},{"name":"mucopolysaccharidosis type 4A","type":"exact"},{"name":"mucopolysaccharidosis type IVA","type":"exact"},{"name":"mucopolysaccharidosis, type 4A","type":"related"},{"name":"mucopolysaccharidosis, type IVA","type":"related"}],"termid":"MONDO:0009659","xrefs":{"Monarch":{"xref_id":"0009659"}}}


id: GO:0006162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete purine/pyrimidine nucleoside diphosphate reduction (obsolete GO:0006162)","synonyms":[{"name":"purine/pyrimidine nucleoside diphosphate reduction","type":"exact"}],"termid":"GO:0006162"}


id: GO:0050580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-D-gluconate + NADP+ = 2,5-didehydro-D-gluconate + NADPH + H+.","definition_xrefs":["EC:1.1.1.274","MetaCyc:1.1.1.274-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2,5-didehydrogluconate reductase activity","secondary_identifiers":["RHEA:23828"],"synonyms":[{"name":"2,5-diketo-D-gluconate reductase activity","type":"related"},{"name":"2-dehydro-D-gluconate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"YqhE reductase","type":"related"}],"termid":"GO:0050580"}


id: PR:000044730
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"The C-terminal portion of telomere maintenance protein SDE2 (Schizosaccharomyces pombe) that remains following proteolytic cleavage after the second glycine within the GGKGG motif. This portion contains a predicted helical domain.","definition_xrefs":["PMID:28947618","PRO:DAN","PomBase:VW"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sde2-C","pombase_gene_id":"SPAC31G5.18c","synonyms":[{"name":"PomBase_original_PRO_term_name: Sde2-C (Schizosaccharomyces pombe)","type":"exact"},{"name":"Sde2-C","type":"exact"},{"name":"Spom-sde2/Sde2-C","type":"exact"}],"termid":"PR:000044730"}


id: FYPO:0006957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidinol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular histidinol level","synonyms":[{"name":"increased cellular L-histidinol level","type":"exact"},{"name":"increased cellular histidinol level during mitotic cell cycle","type":"related"},{"name":"increased cellular histidinol level during vegetative growth","type":"exact"},{"name":"increased histidinol accumulation","type":"related"}],"termid":"FYPO:0006957"}


id: GO:0103001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: dimethyl sulfoxide + H+ + NADH + O2 = dimethyl sulfone + H2O + NAD+ and dimethyl sulfide + H+ + NADH + O2 = dimethyl sulfoxide + H2O + NAD+.","definition_xrefs":["EC:1.14.13.245","PMID:9345770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dimethylsulfoxide oxygenase activity","synonyms":[{"name":"assimilatory dimethylsulfide S-monooxygenase activity","type":"exact"}],"termid":"GO:0103001"}


id: GO:0006945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The fusion of two haploid nuclei to form a single diploid nucleus, as seen in the yeast mating process.","definition_xrefs":["PMID:9442101"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear fusion during karyogamy (obsolete GO:0006945)","synonyms":[{"name":"nuclear fusion during karyogamy","type":"exact"}],"termid":"GO:0006945"}


id: MOD:01604
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 4x(15)N labeled L-arginine.","definition_xrefs":["URL:http://www.sigmaaldrich.com/catalog/ProductDetail.do?N4=600113|ALDRICH&N5=SEARCH_CONCAT_PNO|BRAND_KEY&F=SPEC&lang=en_US0.000000E+000","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(15)N labeled L-arginine","termid":"MOD:01604"}


id: MONDO:0006392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serrated polypoid lesion that arises in the rectum. It rarely produces symptoms. This group includes goblet cell rich, mucin poor, and microvesicular hyperplastic polyps.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyp of rectum","termid":"MONDO:0021398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal hyperplastic polyp","secondary_identifiers":["MEDGEN:277574","NCIT:C5619","UMLS:C1335679","EFO:1000502"],"synonyms":[{"name":"hyperplastic polyp of rectum","type":"exact"},{"name":"hyperplastic polyp of the rectum","type":"exact"},{"name":"rectal Hp","type":"exact"},{"name":"rectal MP","type":"exact"},{"name":"rectal metaplastic polyp","type":"exact"}],"termid":"MONDO:0006392","xrefs":{"Monarch":{"xref_id":"0006392"}}}


id: PBO:0040463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP13A4 antisense RNA 1","termid":"PBO:0040463"}


id: GO:0008911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactaldehyde + NAD+ + H2O = (S)-lactate + NADH + H+.","definition_xrefs":["RHEA:14277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"lactaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.2.1.22","MetaCyc:LACTALDDEHYDROG-RXN"],"synonyms":[{"name":"(S)-lactaldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"L-lactaldehyde:NAD oxidoreductase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide (NAD)-linked dehydrogenase activity","type":"related"}],"termid":"GO:0008911"}


id: GO:0002320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a lymphoid progenitor cell. Lymphoid progenitor cells include progenitor cells for any of the lymphoid lineages.","definition_xrefs":["PMID:16551251","GOC:add","PMID:16551264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"}


id: PBO:0089748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gpl1-Gih35-Wdr83 complex RNA helicase subunit, Gih35","termid":"PBO:0089748"}


id: MONDO:0003389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm which occurs mostly in the major salivary glands (most frequently in the parotid gland), but also in the minor salivary glands of the oral mucosa and the tracheobronchial tree. It is characterized by the presence of ductal structures which are lined by an inner layer of cuboidal epithelial-type cells and an outer layer of myoepithelial cells with clear or eosinophilic cytoplasm.","definition_xrefs":["NCIT:C4199"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"salivary gland cancer","termid":"MONDO:0004669"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epithelial-myoepithelial carcinoma","secondary_identifiers":["DOID:5309","ICDO:8562/3","MEDGEN:90776","UMLS:C0334392","ONCOTREE:EMYOCA"],"synonyms":[{"name":"EMYOCA","type":"related"},{"name":"epithelial-myoepithelial carcinoma","type":"exact"}],"termid":"MONDO:0003389","xrefs":{"Monarch":{"xref_id":"0003389"}}}


id: MONDO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thrombotic thrombocytopenic purpura (obsolete MONDO:0001111)","termid":"MONDO:0001111","xrefs":{"Monarch":{"xref_id":"0001111"}}}


id: GO:0075166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G-protein gamma subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G-protein gamma subunit-mediated signal transduction in response to host (obsolete GO:0075166)","synonyms":[{"name":"positive regulation of symbiont G-protein gamma subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075166"}


id: PBO:0038406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of_or_within,_positive_effect","termid":"PBO:0038406"}


id: GO:1990064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the patterning of the ground tissue.","definition_xrefs":["PMID:23444357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ground tissue pattern formation","synonyms":[{"name":"ground tissue patterning","type":"exact"}],"termid":"GO:1990064"}


id: PBO:0079338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 23","termid":"PBO:0079338"}


id: PBO:0002581
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA Processosome Mitochondrial","termid":"PBO:0002581"}


id: PBO:0060846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEGR1 intronic transcript 1","termid":"PBO:0060846"}


id: PBO:0071872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 10","termid":"PBO:0071872"}


id: PBO:0055987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRTM4 antisense RNA 1","termid":"PBO:0055987"}


id: PBO:0065640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 18","termid":"PBO:0065640"}


id: GO:0044470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction in the frequency, rate or extent of blood coagulation in the bitten organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation perturbing blood coagulation","termid":"GO:0044468"},{"relation_name":"is_a","term_name":"envenomation perturbing hemostasis","termid":"GO:0044483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation suppressing blood coagulation","synonyms":[{"name":"envenomation resulting in negative regulation of blood coagulation in another organism","type":"exact"},{"name":"envenomation resulting in negative regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0044470"}


id: GO:0018650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: styrene + NADPH + FADH + O2 = NADP+ + FAD+ + H2O + styrene oxide.","definition_xrefs":["UM-BBD_reactionID:r0225"],"gene_count":0,"genotype_count":0,"name":"obsolete styrene monooxygenase activity (obsolete GO:0018650)","termid":"GO:0018650"}


id: PBO:0028148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_box_C/D_snoRNA_3'-end_processing","termid":"PBO:0028148"}


id: GO:0018635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (4R)-limonene + NAD(P)H + H+ + O2 = NAD(P)+ + H2O + (4R)-limonene-1,2-epoxide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete (R)-limonene 1,2-monooxygenase activity (obsolete GO:0018635)","termid":"GO:0018635"}


id: GO:0098822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form peptidyl-L-cysteine persulfide.","definition_xrefs":["PMID:11592406"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine modification to L-cysteine persulfide (obsolete GO:0098822)","termid":"GO:0098822"}


id: SO:0000606
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Edited mRNA sequence mediated by two or more overlapping guide RNAs (SO:0000602).","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"editing_domain","synonyms":[{"name":"editing domain","type":"exact"}],"termid":"SO:0000606"}


id: MONDO:0016156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","termid":"MONDO:0016155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0002320","MONDO:0005066"],"is_obsolete":false,"name":"qualitative or quantitative defects of FKRP","secondary_identifiers":["MEDGEN:1842706","Orphanet:207119","GARD:20403","UMLS:C5680827"],"termid":"MONDO:0016156","xrefs":{"Monarch":{"xref_id":"0016156"}}}


id: GO:0006502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent or non-covalent attachment of a prenyl group to the carboxy-terminus of a protein; geranyl, farnesyl, or geranylgeranyl groups may be added.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal protein prenylation (obsolete GO:0006502)","synonyms":[{"name":"C-terminal protein prenylation","type":"exact"}],"termid":"GO:0006502"}


id: MONDO:0022639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cantu Sanchez-Corona Garcia-Cruz syndrome","termid":"MONDO:0022639","xrefs":{"Monarch":{"xref_id":"0022639"}}}


id: GO:0009181
data:
  {"annotated_genes":["SJAG_02796","SJAG_05314","SJAG_06621","SJAG_02785","SJAG_03828","SJAG_03660","SJAG_00027","SJAG_00461","SJAG_02107","SJAG_06622","SJAG_03373","SJAG_02945","SJAG_02369","SJAG_04495","SJAG_02009","SJAG_03903","SJAG_00839","SJAG_01310","SJAG_04334","SJAG_02135","SJAG_00605","SJAG_04192","SJAG_04048","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105259,105627,109185,105258,109184,109190,109188,105257,97793,94807,109189,103432,98066,105628,77659,94318,103178,109187,109186,116142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[72862,75832],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[69868],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine ribonucleoside diphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate catabolic process","termid":"GO:0009137"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate catabolic process","termid":"GO:0009191"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside diphosphate breakdown","type":"exact"},{"name":"purine ribonucleoside diphosphate catabolism","type":"exact"},{"name":"purine ribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009181","terms_by_termid":{"GO:0006110":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: MONDO:0015488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete predominantly large-vessel vasculitis (obsolete MONDO:0015488)","secondary_identifiers":["Orphanet:156140"],"termid":"MONDO:0015488","xrefs":{"Monarch":{"xref_id":"0015488"}}}


id: PBO:0070303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 9","termid":"PBO:0070303"}


id: FYPO:0007078
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119120,119117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a meiotic cell cycle process normally (i.e. indistinguishably from wild type). A meiotic cell cycle process is any of the processes that form part of the meiotic cell cycle, and thereby ensures successive accurate and complete genome replication and meiotic chromosome segregation.","definition_xrefs":["GO:0022402","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic cell cycle process","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00601","SJAG_01355"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta"],"termid":"FYPO:0007078","terms_by_termid":{"FYPO:0000590":null}}


id: PBO:0040456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 11C","termid":"PBO:0040456"}


id: GO:0072286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric connecting tubule over time, from its formation to the mature structure. The metanephric connecting tubule is a tubular segment of the metanephric nephron; it connects the distal convoluted tubule to the collecting duct in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connecting tubule development","termid":"GO:0072027"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric connecting tubule development","synonyms":[{"name":"metanephric connecting duct development","type":"exact"}],"termid":"GO:0072286"}


id: MONDO:0018944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diverse group of pregnancy-related tumors characterized by excessive proliferation of trophoblasts. Representative examples include hydatidiform mole, gestational choriocarcinoma, and placental site trophoblastic tumor.","definition_xrefs":["NCIT:C4699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trophoblastic neoplasm","termid":"MONDO:0002872"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gestational trophoblastic neoplasm","secondary_identifiers":["MedDRA:10061988","GARD:6498","SCTID:609519004","MESH:D006828","SCTID:44782008","MEDGEN:210107","ICD9:630","NCIT:C3110","DOID:3590","Orphanet:59305","UMLS:C1135868","icd11.foundation:1972855304"],"synonyms":[{"name":"GTN","type":"exact"},{"name":"GTT","type":"exact"},{"name":"gestational trophoblastic disease","type":"broad"},{"name":"gestational trophoblastic neoplasia","type":"exact"},{"name":"gestational trophoblastic tumor","type":"exact"},{"name":"gestational trophoblastic tumour","type":"exact"},{"name":"hydatidiform mole","type":"related"},{"name":"molar pregnancy","type":"related"}],"termid":"MONDO:0018944","xrefs":{"Monarch":{"xref_id":"0018944"}}}


id: GO:0050572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-idonate + NAD(P)+ = 5-dehydrogluconate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-idonate 5-dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:1.1.1.264-RXN"],"synonyms":[{"name":"L-idonate:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050572"}


id: GO:1905421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant organ morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:tb","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plant organ morphogenesis","termid":"GO:1905421"}


id: GO:1905891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cellular response to thapsigargin.","definition_xrefs":["GOC:TermGenie","GOC:bc","GOC:aruk","PMID:21803450","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular response to thapsigargin (obsolete GO:1905891)","termid":"GO:1905891"}


id: MONDO:0033368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 59","secondary_identifiers":["OMIM:617904","MEDGEN:1633749","UMLS:C4693550","DOID:0080291"],"synonyms":[{"name":"DEE59","type":"exact"},{"name":"EIEE59","type":"exact"},{"name":"developmental and epileptic encephalopathy 59","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 59","type":"exact"},{"name":"infantile epileptic encephalopathy 59","type":"exact"}],"termid":"MONDO:0033368","xrefs":{"Monarch":{"xref_id":"0033368"}}}


id: PBO:0003452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropteroatesynthase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase (predicted)","termid":"PBO:0003452"}


id: PBO:0005777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Prp18 (predicted)","termid":"PBO:0005777"}


id: GO:0009338
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes exonucleolytic cleavage (in the presence of ATP) in either 5' to 3' or 3' to 5' direction to yield 5'-phosphooligonucleotides. Exodeoxyribonuclease V shows a preference for double-stranded DNA and possesses DNA-dependent ATPase activity. It acts endonucleolytically on single-stranded circular DNA.","definition_xrefs":["PMID:1618858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"exodeoxyribonuclease V complex","termid":"GO:0009338"}


id: PBO:0044156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD small phosphatase 1","termid":"PBO:0044156"}


id: PBO:0081447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 311","termid":"PBO:0081447"}


id: GO:0070272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biogenesis of a proton-transporting ATP synthase (also known as F-type ATPase), a two-sector ATPase found in the inner membrane of mitochondria and chloroplasts, and in bacterial plasma membranes. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.","definition_xrefs":["PMID:19103153","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete proton-transporting ATP synthase complex biogenesis (obsolete GO:0070272)","synonyms":[{"name":"F-type ATPase complex biogenesis","type":"exact"}],"termid":"GO:0070272"}


id: GO:0015025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI-anchored membrane-bound receptor (obsolete GO:0015025)","synonyms":[{"name":"GPI-anchored membrane-bound receptor","type":"exact"}],"termid":"GO:0015025"}


id: MONDO:1012565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyserythropoietic anemia and myopathy syndrome, non-human animal","termid":"MONDO:1011708"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyserythropoietic anemia and myopathy syndrome, dog","secondary_identifiers":["OMIA:002564-9615"],"termid":"MONDO:1012565","xrefs":{"Monarch":{"xref_id":"1012565"}}}


id: PBO:0045285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 36","termid":"PBO:0045285"}


id: PBO:0034657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_3'_overhang_length","termid":"PBO:0034657"}


id: MONDO:0012405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary mixed polyposis syndrome in which the cause of the disease is a mutation in the BMPR1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary mixed polyposis syndrome","termid":"MONDO:0011023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"polyposis syndrome, hereditary mixed, 2","secondary_identifiers":["MESH:C566451","MEDGEN:350500","GARD:18276","DOID:0111686","UMLS:C1864730","OMIM:610069"],"synonyms":[{"name":"BMPR1A hereditary mixed polyposis syndrome","type":"exact"},{"name":"HMPS2","type":"related"},{"name":"hereditary mixed polyposis syndrome caused by mutation in BMPR1A","type":"exact"},{"name":"polyposis syndrome, hereditary mixed, 2","type":"exact"},{"name":"polyposis syndrome, hereditary mixed, type 2","type":"exact"}],"termid":"MONDO:0012405","xrefs":{"Monarch":{"xref_id":"0012405"}}}


id: PBO:0085263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Permease of basic amino acids in the vacuolar membrane","termid":"PBO:0085263"}


id: PBO:0029864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_localization_during_mitosis","termid":"PBO:0029864"}


id: GO:0019174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tetrahydrothiophene 1-oxide + reduced acceptor = tetrahydrothiophene + acceptor.","definition_xrefs":["MetaCyc:THTOREDUCT-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"tetrahydrothiophene 1-oxide reductase activity","termid":"GO:0019174"}


id: MONDO:0006248
data:
  {"annotated_genes":["SJAG_01156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","definition":"A gestational trophoblastic disorder characterized by marked enlargement of the chorionic villi, hyperplasia of the villous trophoblastic cells and hydropic changes.","definition_xrefs":["NCIT:C3110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trophoblastic neoplasm","termid":"MONDO:0002872"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"placenta neoplasm","termid":"MONDO:0021218"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01156":null},"genotype_count":0,"is_obsolete":false,"name":"hydatidiform mole","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D006828","icd11.foundation:946166369","EFO:1000298","SCTID:44782008","Orphanet:99927","MedDRA:10020481","GARD:10263","ICDO:9100/0","MEDGEN:9329","ICD9:631","OMIMPS:231090","ONCOTREE:MP","UMLS:C0020217"],"synonyms":[{"name":"HYDM","type":"related"},{"name":"hydatid mole","type":"exact"},{"name":"hydatidiform mole","type":"exact"},{"name":"hydatidiform mole, recurrent","type":"related"},{"name":"molar pregnancy","type":"exact"}],"termid":"MONDO:0006248","terms_by_termid":{"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0006248"}}}


id: PATO:0000548
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000548 blue light sensitivity value (obsolete PATO:0000548)","termid":"PATO:0000548"}


id: MONDO:1012320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"high-frequency tremor, non-human animal","termid":"MONDO:1011796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-frequency tremor, pig","secondary_identifiers":["OMIA:001200-9823"],"termid":"MONDO:1012320","xrefs":{"Monarch":{"xref_id":"1012320"}}}


id: PBO:0088988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-5-)-methyltransferase Pmt1","termid":"PBO:0088988"}


id: PBO:0058004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3927","termid":"PBO:0058004"}


id: MONDO:0012766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 37 is a pure form of hereditary spastic paraplegia characterized by a childhood- to adulthood-onset of slowly progressive spastic gait, extensor plantar responses, brisk tendon reflexes in arms and legs, decreased vibration sense at ankles and urinary dysfunction. Ankle clonus is also reported in some patients.","definition_xrefs":["Orphanet:171612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 37","secondary_identifiers":["SCTID:763369007","DOID:0110788","MESH:C567931","UMLS:C2936880","GARD:17064","MEDGEN:422458","OMIM:611945"],"synonyms":[{"name":"SPG37","type":"exact"},{"name":"autosomal dominant spastic paraplegia 37","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 37","type":"exact"},{"name":"hereditary spastic paraplegia type 37","type":"exact"},{"name":"spastic paraplegia 37, autosomal dominant","type":"related"}],"termid":"MONDO:0012766","xrefs":{"Monarch":{"xref_id":"0012766"}}}


id: GO:0140507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals induced by granzymes which triggers the cell death of a cell. The pathway starts with reception of a granzyme signal, and ends when the execution phase of cell death is triggered. Granzymes are serine proteases that are secreted by cytotoxic T cells and natural killer cells to induce cell death in target cells.","definition_xrefs":["PMID:32299851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"granzyme-mediated programmed cell death signaling pathway","synonyms":[{"name":"granzyme-mediated cell death signaling pathway","type":"broad"}],"termid":"GO:0140507"}


id: PBO:0089256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap14","termid":"PBO:0089256"}


id: PBO:0047589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen gamma chain","termid":"PBO:0047589"}


id: GO:0060899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a neurectodermal cell to a specialized neurectodermal cell that will give rise to the optic vesicle.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in eye field cell fate commitment of camera-type eye (obsolete GO:0060899)","termid":"GO:0060899"}


id: GO:1903313
data:
  {"annotated_genes":["SJAG_00996","SJAG_00343","SJAG_02622","SJAG_01436","SJAG_01191","SJAG_04153","SJAG_00285","SJAG_03179","SJAG_05010","SJAG_04880","SJAG_02213","SJAG_05694","SJAG_00854","SJAG_04006","SJAG_02370","SJAG_01818","SJAG_16457","SJAG_00759","SJAG_04350","SJAG_04825","SJAG_03113","SJAG_02383","SJAG_03883","SJAG_04118","SJAG_01040","SJAG_02018","SJAG_03876","SJAG_02723","SJAG_03745","SJAG_00686","SJAG_03157","SJAG_01521","SJAG_04084","SJAG_02808","SJAG_02036","SJAG_01053","SJAG_04824","SJAG_03279","SJAG_04682","SJAG_04321","SJAG_01696","SJAG_00966","SJAG_05322","SJAG_01910","SJAG_01919","SJAG_02540","SJAG_02239","SJAG_02058","SJAG_03597","SJAG_00391","SJAG_01944","SJAG_04818","SJAG_01625","SJAG_04407"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[75631,111795,74152,77242,58511,79518],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[117906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[91464],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060212"},{"annotations":[106265,92043,115237,101880,92874,97042,107253,118097,115678,95707,104198,105063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[79284,70297,97853,76408,59967,99732,114938,97939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[92297,92395,70113,73619,94129,89574,79455,95300,78777,115451,116395,90576,75365,77422],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[91465],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[117025,90577,66334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[118208,89262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[75150,110718,91957,73902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[106456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120272"},{"annotations":[72591,89485,104716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060213"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA metabolic process.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"positively_regulates","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":54,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_00996":null,"SJAG_01040":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01436":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01696":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_01919":null,"SJAG_01944":null,"SJAG_02018":null,"SJAG_02036":null,"SJAG_02058":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03279":null,"SJAG_03597":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04682":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"positive regulation of mRNA metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of mRNA metabolic process","type":"narrow"},{"name":"activation of mRNA metabolism","type":"narrow"},{"name":"positive regulation of mRNA metabolism","type":"exact"},{"name":"up regulation of mRNA metabolic process","type":"exact"},{"name":"up regulation of mRNA metabolism","type":"exact"},{"name":"up-regulation of mRNA metabolic process","type":"exact"},{"name":"up-regulation of mRNA metabolism","type":"exact"},{"name":"upregulation of mRNA metabolic process","type":"exact"},{"name":"upregulation of mRNA metabolism","type":"exact"}],"termid":"GO:1903313","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0048026":null,"GO:0060212":null,"GO:0060213":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:0120272":null,"GO:1905746":null,"GO:1990074":null}}


id: GO:0018480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxymethyl-2-hydroxymuconate semialdehyde + H2O + NAD+ = 5-carboxymethyl-2-hydroxymuconate + NADH + H+.","definition_xrefs":["EC:1.2.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity","secondary_identifiers":["RHEA:15681","MetaCyc:CHMS-DEHYDROGENASE-RXN","UM-BBD_reactionID:r0365"],"synonyms":[{"name":"5-carboxymethyl-2-hydroxymuconic-semialdehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"carboxymethylhydroxymuconic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0018480"}


id: MONDO:0014931
data:
  {"annotated_genes":["SJAG_04274"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86944],"is_not":false,"summary":null,"term":"MONDO:0014931"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04274":null},"genotype_count":0,"is_obsolete":false,"name":"Alazami-Yuan syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310702","OMIM:617126","MEDGEN:934669"],"synonyms":[{"name":"ALYUS","type":"exact"},{"name":"Alazami-Yuan syndrome","type":"exact"},{"name":"Alazami-Yuan syndrome; ALYUS","type":"exact"}],"termid":"MONDO:0014931","terms_by_termid":{"MONDO:0014931":null},"xrefs":{"Monarch":{"xref_id":"0014931"}}}


id: GO:1900421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of alcohol catabolic process within a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of alcohol catabolic process","termid":"GO:1900419"},{"relation_name":"positively_regulates","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of alcohol catabolic process","synonyms":[{"name":"activation of cellular alcohol catabolic process","type":"narrow"},{"name":"up regulation of cellular alcohol catabolic process","type":"exact"},{"name":"up-regulation of cellular alcohol catabolic process","type":"exact"},{"name":"upregulation of cellular alcohol catabolic process","type":"exact"}],"termid":"GO:1900421"}


id: GO:0072169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules of the posterior mesonephros acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"},{"relation_name":"is_a","term_name":"specification of mesonephric tubule identity","termid":"GO:0072167"},{"relation_name":"part_of","term_name":"posterior mesonephric tubule development","termid":"GO:0072166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of posterior mesonephric tubule identity","termid":"GO:0072169"}


id: PBO:0109377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 9A","termid":"PBO:0109377"}


id: GO:0034739
data:
  {"annotated_genes":["SJAG_00581","SJAG_03627"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97016,109268],"is_not":false,"summary":null,"term":"GO:0034739"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 16) + H2O = histone H4 L-lysine (position 16) + acetate. This reaction represents the removal of an acetyl group from lysine at position 16 of the histone H4 protein.","definition_xrefs":["GOC:vw","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K deacetylase activity","termid":"GO:0141051"},{"relation_name":"is_a","term_name":"histone deacetylase activity, hydrolytic mechanism","termid":"GO:0141221"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_03627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0033558","GO:0019213","GO:0003674","GO:0140096","GO:0016787"],"is_obsolete":false,"name":"histone H4K16 deacetylase activity, hydrolytic mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H4-K16 deacetylase activity","type":"exact"},{"name":"histone H4K12 deacetylase activity","type":"broad"},{"name":"histone deacetylase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0034739","terms_by_termid":{"GO:0034739":null}}


id: PBO:0063493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1 pseudogene 4","termid":"PBO:0063493"}


id: PBO:0065359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase 1","termid":"PBO:0065359"}


id: PBO:0055966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and coiled-coil centrosomal protein 1","termid":"PBO:0055966"}


id: PBO:0028631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U6_2'-O-snRNA_methylation","termid":"PBO:0028631"}


id: PBO:0045044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 4","termid":"PBO:0045044"}


id: PBO:0068877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 117, pseudogene","termid":"PBO:0068877"}


id: PBO:0062427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 87 pseudogene","termid":"PBO:0062427"}


id: PBO:0052953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinectin 1","termid":"PBO:0052953"}


id: MONDO:0008329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal pseudohypoaldosteronism type 1 (renal PHA1) is a mild form of primary mineralocorticoid resistance restricted to the kidney.","definition_xrefs":["Orphanet:171871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 1","termid":"MONDO:0019161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"autosomal dominant pseudohypoaldosteronism type 1","secondary_identifiers":["MEDGEN:260623","DOID:0060855","NCIT:C126810","OMIM:177735","UMLS:C1449842","GARD:9145"],"synonyms":[{"name":"PHA I, autosomal dominant","type":"related"},{"name":"PHA1A","type":"exact"},{"name":"autosomal dominant PHA 1","type":"exact"},{"name":"autosomal dominant pseudohypoaldosteronism type 1","type":"exact"},{"name":"pseudohypoaldosteronism type 1 autosomal dominant","type":"related"},{"name":"pseudohypoaldosteronism type 1, dominant","type":"related"},{"name":"pseudohypoaldosteronism type i, autosomal dominant","type":"exact"},{"name":"pseudohypoaldosteronism, type I, autosomal dominant","type":"related"},{"name":"renal PHA1","type":"related"},{"name":"renal pseudohypoaldosteronism type 1","type":"related"}],"termid":"MONDO:0008329","xrefs":{"Monarch":{"xref_id":"0008329"}}}


id: GO:0031468
data:
  {"annotated_genes":["SJAG_03891","SJAG_01242","SJAG_01467","SJAG_01050","SJAG_05207","SJAG_01745","SJAG_04489","SJAG_03892","SJAG_00416","SJAG_03783","SJAG_00900"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72067],"is_not":false,"summary":null,"term":"GO:0031468"},{"annotations":[106360,119303,102940,95755,119304,119306,100690,97757,91138,119305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007084"}]},"cv_name":"biological_process","definition":"The reformation of the nuclear membranes following their breakdown in the context of a normal process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01467":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"nuclear membrane reassembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:32243490":null},"synonyms":[{"name":"nuclear envelope reassembly","type":"related"}],"termid":"GO:0031468","terms_by_termid":{"GO:0007084":null,"GO:0031468":null}}


id: PBO:0017580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Rcf2","termid":"PBO:0017580"}


id: PR:Q9UT23
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fml1 gene.","definition_xrefs":["UniProtKB:Q9UT23","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase fml1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.05","synonyms":[{"name":"FANCM-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fml1","type":"exact"}],"termid":"PR:Q9UT23"}


id: MONDO:0012201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tibia, bowing of, with pseudarthrosis and pectus excavatum (obsolete MONDO:0012201)","termid":"MONDO:0012201","xrefs":{"Monarch":{"xref_id":"0012201"}}}


id: PBO:0066468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 5","termid":"PBO:0066468"}


id: SO:0000704
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (or regions) that includes all of the sequence elements necessary to encode a functional transcript. A gene may include regulatory regions, transcribed regions and/or other functional sequence regions.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"member_of","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Gene"],"synonyms":[{"name":"INSDC_feature:gene","type":"exact"}],"termid":"SO:0000704"}


id: GO:0042786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of active immune avoidance which works by regulating the host's antigen processing or presentation pathways, e.g. by blocking any stage in MHC class II presentation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12439615"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion of host immune response via modulation of host antigen processing and presentation (obsolete GO:0042786)","synonyms":[{"name":"active evasion of host immune response via regulation of host antigen processing and presentation","type":"related"},{"name":"active evasion of host immune response via regulation of host antigen processing and presentation pathway","type":"exact"},{"name":"active evasion of immune response of other organism via regulation of antigen processing and presentation in other organism involved in symbiotic interaction","type":"broad"},{"name":"active immune evasion via modulation of antigen processing and presentation","type":"exact"},{"name":"active immune evasion via modulation of antigen processing/presentation","type":"exact"},{"name":"active immune evasion via regulation of antigen processing and presentation","type":"exact"},{"name":"evasion of host immune response via regulation of host antigen processing and presentation","type":"exact"}],"termid":"GO:0042786"}


id: GO:0051084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of assisting in the correct noncovalent folding of newly formed polypeptides or folding intermediates of polypeptides that have exited the ribosome and/or have been stabilized and transferred by other chaperone proteins. This process could involve several cycles of ATP hydrolysis.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"'de novo' protein folding","termid":"GO:0006458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006457","GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"'de novo' post-translational protein folding","secondary_identifiers":["Reactome:R-HSA-391251"],"synonyms":[{"name":"'de novo' posttranslational protein folding","type":"exact"}],"termid":"GO:0051084"}


id: MOD:00909
data:
  {"annotated_genes":["SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00226"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-histidine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01671":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-histidine residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"ModHis","type":"exact"}],"termid":"MOD:00909","terms_by_termid":{"MOD:00226":null}}


id: GO:0043057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Posterior movement of an organism, e.g. following the direction of the tail of an animal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"directional locomotion","termid":"GO:0033058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"backward locomotion","termid":"GO:0043057"}


id: PBO:0066950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 252","termid":"PBO:0066950"}


id: GO:0044210
data:
  {"annotated_genes":["SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62943],"is_not":false,"summary":null,"term":"GO:0044210"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytidine 5'-triphosphate (CTP) from simpler components.","definition_xrefs":["PMID:11912132","GOC:jl","GOC:ecd","PMID:18439916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CTP biosynthetic process","termid":"GO:0006241"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"'de novo' CTP biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"'de novo' cytidine 5'-triphosphate biosynthetic process","type":"exact"}],"termid":"GO:0044210","terms_by_termid":{"GO:0044210":null}}


id: PBO:0048771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol anchored molecule like","termid":"PBO:0048771"}


id: GO:0039579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont inhibits or disrupts a host ubiquitin-like protein ISG15 conjugation to a substrate. ISG15 is a ubiquitin-like protein that is conjugated to lysine residues on various target proteins. For example, some viruses escape the antiviral activity of ISG15 by using different mechanisms; the influenza B virus NS1 protein blocks the covalent linkage of ISG15 to its target proteins by directly interacting with ISG15, while the papain-like protease from the coronavirus cleaves ISG15 derivatives.","definition_xrefs":["PMID:18604270","PMID:32845033","PMID:11157743","PMID:18078692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host ISG15-protein conjugation","synonyms":[{"name":"suppression by virus of host ISG15 activity","type":"related"},{"name":"suppression by virus of host ISG15-protein conjugation","type":"narrow"}],"termid":"GO:0039579"}


id: PBO:0045028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3 like exosome 3'-5' exoribonuclease","termid":"PBO:0045028"}


id: PBO:0067042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 60, pseudogene","termid":"PBO:0067042"}


id: PBO:0079891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase homolog","termid":"PBO:0079891"}


id: MONDO:0011462
data:
  {"annotated_genes":["SJAG_04077","SJAG_03596"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84927,84928],"is_not":false,"summary":null,"term":"MONDO:0011462"}]},"cv_name":"mondo","definition":"A rare pleiotropic autoinflammatory disorder of childhood, primarily affecting the joints and skin.","definition_xrefs":["Orphanet:69126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03596":null,"SJAG_04077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pyogenic arthritis-pyoderma gangrenosum-acne syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:724015007","OMIM:604416","UMLS:C1858361","MEDGEN:346801","NCIT:C119055","DOID:0080519","GARD:9176","NANDO:1200868","NANDO:2200437","MESH:C536253"],"synonyms":[{"name":"FRA","type":"exact"},{"name":"PAPA","type":"exact"},{"name":"Papas","type":"related"},{"name":"familial recurrent arthritis","type":"exact"},{"name":"fra","type":"exact"},{"name":"papa","type":"exact"},{"name":"papa syndrome","type":"exact"},{"name":"pyogenic STERILE arthritis, pyoderma gangrenosum, and acne","type":"related"},{"name":"pyogenic arthritis, pyoderma gangrenosum and acne","type":"related"},{"name":"pyogenic arthritis, pyoderma gangrenosum, and severe cystic acne","type":"related"}],"termid":"MONDO:0011462","terms_by_termid":{"MONDO:0011462":null},"xrefs":{"Monarch":{"xref_id":"0011462"}}}


id: FYPO:0004262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during G2 phase of the mitotic cell cycle and during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during cellular response to ionizing radiation","termid":"FYPO:0002471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during G2 phase of mitotic cell cycle","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during mitotic G2 phase","type":"exact"},{"name":"abolished protein phosphorylation during mitotic G2 phase during cellular response to IR","type":"exact"},{"name":"abolished protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during mitotic G2 phase during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004262"}


id: PBO:0048486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germinal center associated signaling and motility like","termid":"PBO:0048486"}


id: PBO:0004269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase I","termid":"PBO:0004269"}


id: PBO:0026880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RITS_complex_assembly","termid":"PBO:0026880"}


id: GO:0009322
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the reduction of trimethylamine N-oxide to trimethylamine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trimethylamine-N-oxide reductase complex (obsolete GO:0009322)","termid":"GO:0009322"}


id: GO:0080150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + S-adenosyl-L-methionine = methylbenzoate + S-adenosyl-L-homocysteine.","definition_xrefs":["MetaCyc:RXN-6722","PMID:10852939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity","secondary_identifiers":["RHEA:36099"],"synonyms":[{"name":"S-adenosyl-L-methionine:benzoate carboxyl methyltransferase activity","type":"exact"}],"termid":"GO:0080150"}


id: MONDO:0012088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the HYDIN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 5","secondary_identifiers":["MEDGEN:324840","MESH:C563886","DOID:0110617","GARD:15438","OMIM:608647","UMLS:C1837615"],"synonyms":[{"name":"CILD5","type":"exact"},{"name":"HYDIN primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 5","type":"related"},{"name":"ciliary dyskinesia, primary, 5, without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 5","type":"exact"},{"name":"primary ciliary dyskinesia 5 without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in HYDIN","type":"exact"},{"name":"primary ciliary dyskinesia type 5","type":"exact"}],"termid":"MONDO:0012088","xrefs":{"Monarch":{"xref_id":"0012088"}}}


id: PBO:0079647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 S","termid":"PBO:0079647"}


id: MONDO:0016777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inhalational botulism is a man-made form of botulism, a rare acquired neuromuscular junction disease with descending flaccid paralysis caused by botulinum neurotoxins (BoNTs).","definition_xrefs":["Orphanet:254504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"botulism","termid":"MONDO:0005498"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhalational botulism","secondary_identifiers":["icd11.foundation:1881625139","GARD:20746","UMLS:C1443900","MEDGEN:731169","SCTID:409562009"],"synonyms":[{"name":"inhalation botulism","type":"exact"}],"termid":"MONDO:0016777","xrefs":{"Monarch":{"xref_id":"0016777"}}}


id: PBO:0066860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 160","termid":"PBO:0066860"}


id: PATO:0002101
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of having changed from one fully differentiated state into another.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaplastic","synonyms":[{"name":"trans-differentiated","type":"related"}],"termid":"PATO:0002101"}


id: PBO:0081445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 302","termid":"PBO:0081445"}


id: PBO:0035950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_centromeric_chromatin_during_mitotic_G1_phase","termid":"PBO:0035950"}


id: FYPO:0000224
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a single cell grows in the form of a lemon. A lemon shape is defined mathematically as having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"lemon-shaped cell","synonyms":[{"name":"cell morphology, lemon shaped","type":"exact"},{"name":"lemon-shaped cell during mitotic cell cycle","type":"related"},{"name":"lemon-shaped cell during vegetative growth","type":"exact"},{"name":"lemon-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0000224"}


id: PBO:0054692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2101","termid":"PBO:0054692"}


id: PBO:0088804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall and ascospore endo-1,3-beta-glucanase Eng2","termid":"PBO:0088804"}


id: PBO:0059287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42 pseudogene 2","termid":"PBO:0059287"}


id: FYPO:0005503
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119089],"is_not":false,"summary":null,"term":"FYPO:0005503"}],"single_locus_phenotype":[{"annotations":[119083,119196,119197,119199],"is_not":false,"summary":null,"term":"FYPO:0005503"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized to both cell tips is instead found at only one tip.","definition_xrefs":["PomBase:mah","PMID:26749213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_01143":null,"SJAG_01794":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_04280":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abnormally monopolar protein localization to cell tip","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta"],"synonyms":[{"name":"abnormal monopolar protein localization to one cell end","type":"exact"},{"name":"abnormally monopolar protein localisation to cell tip","type":"exact"},{"name":"abnormally monopolar protein localization to cell end","type":"exact"},{"name":"abnormally monopolar protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"abnormally monopolar protein localization to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005503","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0005503":null}}


id: PBO:0050310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 12","termid":"PBO:0050310"}


id: PBO:0036522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain protein, implicated in cytosketon organization or vesicle-mediated transport","termid":"PBO:0036522"}


id: FYPO:0009101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing glycerol and galactose carbon sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased cell population growth on glycerol and galactose carbon source","synonyms":[{"name":"increased vegetative cell growth on glycerol and galactose carbon source","type":"exact"}],"termid":"FYPO:0009101"}


id: PBO:0076446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 2","termid":"PBO:0076446"}


id: GO:0016402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pristanoyl-CoA + O2 = trans-2,3-dehydropristanoyl-CoA + hydrogen peroxide.","definition_xrefs":["GOC:jsg","RHEA:40459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA oxidase activity","termid":"GO:0003997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pristanoyl-CoA oxidase activity","secondary_identifiers":["Reactome:R-HSA-389891","Reactome:R-HSA-389889"],"termid":"GO:0016402"}


id: GO:0045958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of complement activation by the alternative pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation, alternative pathway","termid":"GO:0030451"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"positive regulation of complement activation","termid":"GO:0045917"},{"relation_name":"positively_regulates","term_name":"complement activation, alternative pathway","termid":"GO:0006957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of complement activation, alternative pathway","synonyms":[{"name":"activation of complement activation, alternative pathway","type":"narrow"},{"name":"positive regulation of complement cascade, alternative pathway","type":"exact"},{"name":"stimulation of complement activation, alternative pathway","type":"narrow"},{"name":"up regulation of complement activation, alternative pathway","type":"exact"},{"name":"up-regulation of complement activation, alternative pathway","type":"exact"},{"name":"upregulation of complement activation, alternative pathway","type":"exact"}],"termid":"GO:0045958"}


id: GO:0071734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + biotin + apo-(pyruvate-carboxylase) = AMP + diphosphate + biotin-(pyruvate-carboxylase).","definition_xrefs":["PMID:10551847","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete biotin-[pyruvate-carboxylase] ligase activity (obsolete GO:0071734)","synonyms":[{"name":"biotin-[pyruvate carboxylase] ligase activity","type":"exact"},{"name":"biotin-[pyruvate carboxylase] synthetase activity","type":"exact"},{"name":"biotin-pyruvate carboxylase synthetase activity","type":"exact"},{"name":"biotin-pyruvate-carboxylase ligase activity","type":"exact"},{"name":"biotin:apo-pyruvate-carboxylase ligase","type":"exact"}],"termid":"GO:0071734"}


id: GO:0051558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phlobaphenes, red pigments with oligomeric or polymeric structure derived from the flavonoid intermediate flavan-4-ols.","definition_xrefs":["PMID:11402179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phlobaphene metabolic process","synonyms":[{"name":"phlobaphene metabolism","type":"exact"}],"termid":"GO:0051558"}


id: GO:0006378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA polyadenylation (obsolete GO:0006378)","termid":"GO:0006378"}


id: PBO:0061699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUPR2 pseudogene 1","termid":"PBO:0061699"}


id: PBO:0085805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; dgr1 null mutant is resistant to 2-deoxy-D-glucose","termid":"PBO:0085805"}


id: PATO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which starts later than the natural start time or the reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"onset quality","termid":"PATO:0002325"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed","synonyms":[{"name":"late","type":"related"}],"termid":"PATO:0000502"}


id: FYPO:0005246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing melibiose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002058","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth on melibiose carbon source","synonyms":[{"name":"decreased growth on melibiose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on melibiose carbon source","type":"exact"},{"name":"reduced cell growth on melibiose carbon source","type":"related"},{"name":"slow cell growth on melibiose carbon source","type":"narrow"}],"termid":"FYPO:0005246"}


id: GO:0102040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: fumarate + a menaquinol = succinate + a menaquinone.","definition_xrefs":["PMID:11850430","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete fumarate reductase (menaquinone) (obsolete GO:0102040)","termid":"GO:0102040"}


id: PBO:0041181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 3 member A3","termid":"PBO:0041181"}


id: MONDO:0005997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing or stricture of the tricuspid orifice of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricuspid valve disorder","termid":"MONDO:0000471"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"tricuspid valve stenosis","secondary_identifiers":["MESH:D014264","MEDGEN:21678","EFO:0007525","HP:0010446","NANDO:2200300","UMLS:C0040963","icd11.foundation:442626161","NCIT:C50783","SCTID:49915006","DOID:4078"],"synonyms":[{"name":"tricuspid stenosis","type":"exact"}],"termid":"MONDO:0005997","xrefs":{"Monarch":{"xref_id":"0005997"}}}


id: PBO:0081154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP92 zinc finger protein","termid":"PBO:0081154"}


id: FYPO:0003985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of an amino acid measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered cellular amino acid level during vegetative growth","termid":"FYPO:0003984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular amino acid level","synonyms":[{"name":"decreased cellular amino acid level during mitotic cell cycle","type":"related"},{"name":"decreased cellular amino acid level during vegetative growth","type":"exact"},{"name":"decreased level of amino acid in cell","type":"exact"},{"name":"reduced cellular amino acid level","type":"exact"},{"name":"reduced level of amino acid in cell","type":"exact"}],"termid":"FYPO:0003985"}


id: PBO:0079990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 28","termid":"PBO:0079990"}


id: PBO:0082194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alkaline ceramidase; also has reverse (CoA-independent) ceramide synthase activity; catalyzes both breakdown and synthesis of phytoceramide; overexpression confers fumonisin B1 resistance; YPC1 has a paralog, YDC1, that arose from the whole genome duplication","termid":"PBO:0082194"}


id: PBO:0069574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 847, pseudogene","termid":"PBO:0069574"}


id: FYPO:0006788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A)-specific ribonuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased ribonuclease activity","termid":"FYPO:0003822"},{"relation_name":"is_a","term_name":"abnormal poly(A)-specific ribonuclease activity","termid":"FYPO:0006787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased poly(A)-specific ribonuclease activity","synonyms":[{"name":"reduced poly(A)-specific ribonuclease activity","type":"exact"}],"termid":"FYPO:0006788"}


id: PBO:0069312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 570, pseudogene","termid":"PBO:0069312"}


id: PBO:0042645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 20 pseudogene","termid":"PBO:0042645"}


id: PBO:0040827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 2","termid":"PBO:0040827"}


id: MONDO:0043154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian cyst","termid":"MONDO:0003282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal ovarian cyst","secondary_identifiers":["UMLS:C2931186","MEDGEN:443996","MESH:C536396"],"synonyms":[{"name":"fetal ovarian cyst","type":"related"},{"name":"foetal ovarian cyst","type":"related"}],"termid":"MONDO:0043154","xrefs":{"Monarch":{"xref_id":"0043154"}}}


id: GO:0050682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an AF-2 protein domain, a highly conserved ligand-dependent transactivation domain which is essential for receptor-mediated transcriptional activation.","definition_xrefs":["PMID:9682036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"AF-2 domain binding","termid":"GO:0050682"}


id: MONDO:0001032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Mooren ulcer","secondary_identifiers":["ICD9:370.07","MEDGEN:509770","SCTID:22440001","UMLS:C0155072","DOID:10439","Orphanet:519408","GARD:22132"],"synonyms":[{"name":"Mooren's ulcer","type":"exact"}],"termid":"MONDO:0001032","xrefs":{"Monarch":{"xref_id":"0001032"}}}


id: PBO:0082305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartate kinase (L-aspartate 4-P-transferase); cytoplasmic enzyme that catalyzes the first step in the common pathway for methionine and threonine biosynthesis; expression regulated by Gcn4p and the general control of amino acid synthesis","termid":"PBO:0082305"}


id: PBO:0013479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase/ serine hydrolase family fusion protein Dfr1","termid":"PBO:0013479"}


id: PBO:0090213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase","termid":"PBO:0090213"}


id: PBO:0029503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_elongated,_curved_germ_tube","termid":"PBO:0029503"}


id: PBO:0090210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP assembly protein Shq1","termid":"PBO:0090210"}


id: PBO:0067269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 343, pseudogene","termid":"PBO:0067269"}


id: PR:O94263
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase epsilon subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12708:SF0","OMA:SCHPO03798","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.14c","secondary_identifiers":["UniProtKB:O94263"],"synonyms":[{"name":"DNA polymerase II subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLE2","type":"exact"}],"termid":"PR:O94263"}


id: PBO:0002911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human WDR59 ortholog","termid":"PBO:0002911"}


id: PBO:0063735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin 1","termid":"PBO:0063735"}


id: MONDO:0006456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm arising from the epithelial cells of the thymus. Although thymomas are usually encapsulated tumors, they may invade the capsule and infiltrate the surrounding tissues or even metastasize to distant anatomic sites. The following morphologic subtypes are currently recognized: type A, type B, type AB, metaplastic, micronodular, microscopic, and sclerosing thymoma. Thymomas type B are further subdivided into types B1, B2, and B3. Thymoma type B3 usually has the most aggressive clinical course.","definition_xrefs":["NCIT:C3411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymic epithelial neoplasm","termid":"MONDO:0018079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymoma","secondary_identifiers":["GARD:16922","UMLS:C0040100","ONCOTREE:THYM","MESH:D013945","Orphanet:99867","icd11.foundation:33869057","MedDRA:10043670","EFO:1000581","ICDO:8580/1","ICD10CM:D15.0","ICD9:239.89","DOID:3275","HP:0100522","MEDGEN:52743","SCTID:444231005"],"synonyms":[{"name":"THYM","type":"related"},{"name":"primary thymic epithelial neoplasm","type":"exact"},{"name":"primary thymic epithelial tumor","type":"exact"},{"name":"primary thymic epithelial tumour","type":"exact"},{"name":"thymoma","type":"exact"},{"name":"thymoma (disease)","type":"exact"}],"termid":"MONDO:0006456","xrefs":{"Monarch":{"xref_id":"0006456"}}}


id: PBO:0000744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit J (predicted)","termid":"PBO:0000744"}


id: GO:0003333
data:
  {"annotated_genes":["SJAG_02941","SJAG_03970","SJAG_04725","SJAG_02947","SJAG_01336","SJAG_00019","SJAG_04715","SJAG_03591","SJAG_05342","SJAG_04637","SJAG_01096","SJAG_02605","SJAG_04588","SJAG_00543","SJAG_01770","SJAG_01998","SJAG_04296","SJAG_02062","SJAG_02955","SJAG_02133","SJAG_00877","SJAG_04295","SJAG_04984","SJAG_00149","SJAG_01636","SJAG_04903","SJAG_02029","SJAG_04718","SJAG_03256","SJAG_02716","SJAG_06598","SJAG_04787","SJAG_00626","SJAG_00051","SJAG_03400","SJAG_04135","SJAG_03827","SJAG_00015","SJAG_00522","SJAG_02113","SJAG_04957","SJAG_01994","SJAG_01923","SJAG_02946","SJAG_03899","SJAG_04983","SJAG_05346","SJAG_00991","SJAG_03829","SJAG_02150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72979,75162,75346,76034,76476,76634,77510,77534,78392,79744,79877,80144,89492,95491,99827,103320,118048,118049,118050,118051,118052,118053,118054,118055],"is_not":false,"summary":null,"term":"GO:0003333"},{"annotations":[76880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032974"},{"annotations":[109820,102593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[90186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[94386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[103815,103817,103818,97136,103816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[63420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[69720,98023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"},{"annotations":[102594,109821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"},{"annotations":[95816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902475"},{"annotations":[100160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[97151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[103623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[98624,63278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[96352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[98024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[103625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[96353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"},{"annotations":[97152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[103626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[100161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[103627,102595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[97153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[109822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[103629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[103630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[107702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"},{"annotations":[87879],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[110333,98679,93131,91537],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[93132,98680,91538],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[93133],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[100154,101015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905647"},{"annotations":[90410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"}]},"cv_name":"biological_process","definition":"The process in which an amino acid is transported across a membrane.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"transmembrane 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id: PBO:0061857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 2A","termid":"PBO:0061857"}


id: FYECO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ferrous sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FeSO4","synonyms":[{"name":"iron sulfate added","type":"exact"},{"name":"iron sulphate added","type":"exact"}],"termid":"FYECO:0000186"}


id: GO:0005177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class of ligands for neurexins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete neuroligin (obsolete GO:0005177)","synonyms":[{"name":"neuroligin","type":"exact"}],"termid":"GO:0005177"}


id: PR:O13602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps28 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S28, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.04c","synonyms":[{"name":"Spom972h-mrps28","type":"exact"}],"termid":"PR:O13602"}


id: GO:0061714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining selectively with extracellular folic acid and delivering it into the cell via endocytosis.","definition_xrefs":["GOC:BHF","GOC:hal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"folic acid receptor activity","synonyms":[{"name":"folate receptor activity","type":"exact"}],"termid":"GO:0061714"}


id: PBO:0073343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 5","termid":"PBO:0073343"}


id: _global:part_of_structure_that_is_capable_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"this relation holds between c and p when c is part of some c', and c' is capable of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"part_of_structure_that_is_capable_of","secondary_identifiers":["RO:0002329"],"termid":"_global:part_of_structure_that_is_capable_of"}


id: PBO:0009146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-dependent serine/threonine protein phosphatase calcineurin A, catalytic subunit Ppb1","termid":"PBO:0009146"}


id: PBO:0075613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted phosphoprotein 1","termid":"PBO:0075613"}


id: GO:0106407
data:
  {"annotated_genes":["SJAG_03280"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87168],"is_not":false,"summary":null,"term":"GO:0106407"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: Glc(2)Man(9)GlcNAc(2)-[protein] + H2O = GlcMan(9)GlcNAc(2)-[protein] + beta-D-glucopyranose.","definition_xrefs":["EC:3.2.1.207","PMID:30389790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"Glc2Man9GlcNAc2 oligosaccharide glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glucosidase II","type":"broad"}],"termid":"GO:0106407","terms_by_termid":{"GO:0106407":null}}


id: FYECO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The assay, or growth of cells, was conducted under strict anaerobic conditions.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic environment","synonyms":[{"name":"- O","type":"exact"},{"name":"- oxygen","type":"exact"},{"name":"-O","type":"exact"},{"name":"-oxygen","type":"exact"},{"name":"anaerobiosis","type":"exact"},{"name":"minus oxygen","type":"exact"}],"termid":"FYECO:0000134"}


id: PBO:0044017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 gamma 1","termid":"PBO:0044017"}


id: PR:Q10146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex exonuclease rrp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.01","synonyms":[{"name":"Spom972h-rrp6","type":"exact"},{"name":"ribosomal RNA-processing protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10146"}


id: PBO:0067024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 37, pseudogene","termid":"PBO:0067024"}


id: MONDO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral intrinsic sphincter deficiency","secondary_identifiers":["ICD9:599.82","MEDGEN:843584","DOID:13461","UMLS:C0375381"],"synonyms":[{"name":"intrinsic (urethral) sphincter deficiency [ISD]","type":"exact"}],"termid":"MONDO:0001721","xrefs":{"Monarch":{"xref_id":"0001721"}}}


id: GO:0043209
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system.","definition_xrefs":["NIF_Subcellular:sao593830697","Wikipedia:Myelin","GOC:cjm","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"myelin sheath","secondary_identifiers":["FMA:62983"],"synonyms":[{"name":"Schwann cell myelin sheath","type":"narrow"},{"name":"astrocyte sheath","type":"narrow"},{"name":"oligodendrocyte myelin sheath","type":"narrow"}],"termid":"GO:0043209"}


id: MONDO:1011179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis that occurs in ass.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis, non-human animal","termid":"MONDO:1010300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis, ass","secondary_identifiers":["OMIA:000755-9793"],"termid":"MONDO:1011179","xrefs":{"Monarch":{"xref_id":"1011179"}}}


id: FYPO:0003553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of an RNA catabolic process is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process","termid":"FYPO:0003551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA catabolic process","synonyms":[{"name":"increased RNA breakdown","type":"exact"},{"name":"increased RNA catabolism","type":"exact"},{"name":"increased RNA degradation","type":"exact"}],"termid":"FYPO:0003553"}


id: PBO:0024859
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex translocates along DNA/RNA duplex","termid":"PBO:0024859"}


id: PBO:0013440
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A partially suppresses sty1delta sensitivity to UV","termid":"PBO:0013440"}


id: GO:1990745
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A quatrefoil tethering complex required for endocytic recycling.","definition_xrefs":["PMID:25799061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"recycling endosome","termid":"GO:0055037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005768","GO:0032991","GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"EARP complex","termid":"GO:1990745"}


id: GO:1901794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-(3-hydroxyphenyl)propanoate.","definition_xrefs":["GOC:TermGenie","GOC:yaf","MetaCyc:PWY0-1277","PMID:10537203","UniPathway:UPA00835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"3-(3-hydroxyphenyl)propanoate metabolic process","termid":"GO:1901793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"3-(3-hydroxyphenyl)propanoate catabolic process","synonyms":[{"name":"3-(3-hydroxyphenyl)propanoate breakdown","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate catabolism","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate degradation","type":"exact"}],"termid":"GO:1901794"}


id: FYECO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a high temperature (roughly above 25 degrees Celsius) followed by growth at standard temperature (in the range around 25-32 degrees Celsius).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature shift, high to standard","synonyms":[{"name":"growth at high temperature followed by growth at standard temperature","type":"related"}],"termid":"FYECO:0000288"}


id: GO:0098714
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101452],"is_not":false,"summary":null,"term":"GO:0098714"}]},"cv_name":"biological_process","definition":"The directed movement of malate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transmembrane transport","termid":"GO:0071423"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"malate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097405"],"synonyms":[{"name":"malate import into cell","type":"exact"}],"termid":"GO:0098714","terms_by_termid":{"GO:0098714":null}}


id: PBO:0082689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes; HAT/Core module also contains Gcn5p, Ngg1p, and Ada2p; binds methylated histone H3K4; involved in transcriptional regulation through SAGA and TBP recruitment to target promoters and H3 acetylation","termid":"PBO:0082689"}


id: MOD:00458
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disorder","type":"exact"}],"termid":"MONDO:0005093","terms_by_termid":{"MONDO:0007048":null,"MONDO:0007145":null,"MONDO:0007369":null,"MONDO:0007417":null,"MONDO:0007483":null,"MONDO:0007485":null,"MONDO:0007507":null,"MONDO:0007574":null,"MONDO:0007619":null,"MONDO:0007858":null,"MONDO:0008017":null,"MONDO:0008021":null,"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0008218":null,"MONDO:0008293":null,"MONDO:0008294":null,"MONDO:0008296":null,"MONDO:0008297":null,"MONDO:0008319":null,"MONDO:0008416":null,"MONDO:0008695":null,"MONDO:0008876":null,"MONDO:0008962":null,"MONDO:0009136":null,"MONDO:0009185":null,"MONDO:0009440":null,"MONDO:0009578":null,"MONDO:0009902":null,"MONDO:0009910":null,"MONDO:0010020":null,"MONDO:0010152":null,"MONDO:0010208":null,"MONDO:0010210":null,"MONDO:0010211":null,"MONDO:0010212":null,"MONDO:0010214":null,"MONDO:0010215":null,"MONDO:0010216":null,"MONDO:0010221":null,"MONDO:0010420":null,"MONDO:0010495":null,"MONDO:0010523":null,"MONDO:0010584":null,"MONDO:0010621":null,"MONDO:0010854":null,"MONDO:0010909":null,"MONDO:0011125":null,"MONDO:0011169":null,"MONDO:0011405":null,"MONDO:0011683":null,"MONDO:0011997":null,"MONDO:0012071":null,"MONDO:0012074":null,"MONDO:0012251":null,"MONDO:0012531":null,"MONDO:0012556":null,"MONDO:0012853":null,"MONDO:0013000":null,"MONDO:0013519":null,"MONDO:0013520":null,"MONDO:0013521":null,"MONDO:0013806":null,"MONDO:0013829":null,"MONDO:0013868":null,"MONDO:0013997":null,"MONDO:0014010":null,"MONDO:0014048":null,"MONDO:0014070":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0014131":null,"MONDO:0014169":null,"MONDO:0014402":null,"MONDO:0014600":null,"MONDO:0014615":null,"MONDO:0014619":null,"MONDO:0014690":null,"MONDO:0014713":null,"MONDO:0014755":null,"MONDO:0014802":null,"MONDO:0014841":null,"MONDO:0014885":null,"MONDO:0014886":null,"MONDO:0016368":null,"MONDO:0016369":null,"MONDO:0018163":null,"MONDO:0020738":null,"MONDO:0024517":null,"MONDO:0024552":null,"MONDO:0030048":null,"MONDO:0030517":null,"MONDO:0030518":null,"MONDO:0031057":null,"MONDO:0032806":null,"MONDO:0033014":null,"MONDO:0044792":null,"MONDO:0100221":null,"MONDO:0859355":null,"MONDO:0957577":null,"MONDO:0958023":null},"xrefs":{"Monarch":{"xref_id":"0005093"}}}


id: PBO:0081587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 514","termid":"PBO:0081587"}


id: GO:0042728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a flavin, any derivative of the dimethylisoalloxazine (7,8-dimethylbenzo[g]pteridine-2,4(3H,10H)-dione) skeleton, with a substituent on the 10 position.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"flavin-containing compound metabolic process","termid":"GO:0042726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavin-containing compound catabolic process","synonyms":[{"name":"flavin-containing compound catabolic process breakdown","type":"exact"},{"name":"flavin-containing compound catabolic process degradation","type":"exact"},{"name":"flavin-containing compound catabolism","type":"exact"},{"name":"riboflavin and derivative catabolic process","type":"related"},{"name":"riboflavin and derivative catabolism","type":"related"},{"name":"vitamin B2 and derivative catabolic process","type":"related"},{"name":"vitamin B2 and derivative catabolism","type":"related"}],"termid":"GO:0042728"}


id: GO:1990051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of the inactive enzyme protein kinase C.","definition_xrefs":["PMID:3156004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of protein kinase activity","termid":"GO:0032147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of protein kinase C activity","synonyms":[{"name":"PKC activation","type":"exact"},{"name":"protein kinase C activation","type":"exact"}],"termid":"GO:1990051"}


id: PBO:0046886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 9 member B","termid":"PBO:0046886"}


id: PBO:0003013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 4","termid":"PBO:0003013"}


id: PBO:0028001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_polyubiquitination","termid":"PBO:0028001"}


id: PBO:0004460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp43 (predicted)","termid":"PBO:0004460"}


id: PBO:0026811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_ethanol","termid":"PBO:0026811"}


id: GO:0070932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of one or more acetyl groups.","definition_xrefs":["GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3 deacetylation (obsolete GO:0070932)","termid":"GO:0070932"}


id: PBO:0033815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm3/Smc3","termid":"PBO:0033815"}


id: GO:0046694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the use of stored sperm from the first-mating male is inhibited by the seminal fluid of subsequently mating males.","definition_xrefs":["PMID:10440373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm competition","termid":"GO:0046692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm incapacitation","termid":"GO:0046694"}


id: PBO:0078977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 4-2","termid":"PBO:0078977"}


id: GO:0031395
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuropeptide hormone secreted by the central nervous system of insects that stimulates the tanning and sclerotization of the adult cuticle following eclosion. The active hormone consists of an obligate heterodimer of the alpha and beta subunits.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"bursicon neuropeptide hormone complex","termid":"GO:0031395"}


id: GO:0043987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an phosphate group to a serine residue at position 10 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-S10 phosphorylation (obsolete GO:0043987)","synonyms":[{"name":"histone H3 phosphorylation at S10","type":"exact"},{"name":"histone H3S10 phosphorylation","type":"exact"}],"termid":"GO:0043987"}


id: PBO:0072095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 26","termid":"PBO:0072095"}


id: PBO:0049442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 19","termid":"PBO:0049442"}


id: MONDO:0859258
data:
  {"annotated_genes":["SJAG_03551"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86740],"is_not":false,"summary":null,"term":"MONDO:0859258"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dystonia and seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5677004","MEDGEN:1804461","OMIM:619922"],"termid":"MONDO:0859258","terms_by_termid":{"MONDO:0859258":null},"xrefs":{"Monarch":{"xref_id":"0859258"}}}


id: PBO:0110066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, implicated in rRNA processing from interactions, human TTC27 ortholog","termid":"PBO:0110066"}


id: GO:0110036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the C2 domain of a protein, a protein structural domain involved in targeting proteins to cell membranes.","definition_xrefs":["PMID:24882364","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"C2 domain binding","termid":"GO:0110036"}


id: PBO:0041025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family C","termid":"PBO:0041025"}


id: PR:Q9P7J5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATPase family AAA domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04505","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AAA domain-containing protein C24B10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.10c","secondary_identifiers":["UniProtKB:Q9P7J5"],"synonyms":[{"name":"Spom972h-ATAD1","type":"exact"}],"termid":"PR:Q9P7J5"}


id: MONDO:1011767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminitis, non-human animal","secondary_identifiers":["OMIA:001225"],"termid":"MONDO:1011767","xrefs":{"Monarch":{"xref_id":"1011767"}}}


id: PBO:0087589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; has mRNA binding activity","termid":"PBO:0087589"}


id: FYPO:0003176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic chromosome segregation is normal (i.e. indistinguishable from wild type). Meiotic chromosome segregation is the entire process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets during M phase of the meiotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0045132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic chromosome segregation","termid":"FYPO:0003176"}


id: PBO:0057394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-2","termid":"PBO:0057394"}


id: PBO:0050861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducible T cell costimulator ligand","termid":"PBO:0050861"}


id: PBO:0057695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1284","termid":"PBO:0057695"}


id: null:NCBI Taxonomy id
data:
  {"annotation_feature_type":"gene","cv_name":"organism property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxon_id","termid":"null:NCBI Taxonomy id"}


id: MONDO:0000573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe combined immunodeficiency that is the result of a mutation on Chromosome 6 RAG2 gene involving genetic rearrangement of both the T- and B-lymphocyte receptor genes.","definition_xrefs":["DOID:0060012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"recombinase activating gene 2 deficiency","synonyms":[{"name":"recombinase activating gene 2 deficiency","type":"exact"}],"termid":"MONDO:0000573","xrefs":{"Monarch":{"xref_id":"0000573"}}}


id: PBO:0072255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 30","termid":"PBO:0072255"}


id: PBO:0060074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 21","termid":"PBO:0060074"}


id: PBO:0052225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 3","termid":"PBO:0052225"}


id: GO:0098015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the virion that may be used to recognize, attach and inject the viral genome and accessory proteins into the host cell.","definition_xrefs":["GOC:bm","VZ:3958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail","synonyms":[{"name":"bacteriophage tail","type":"narrow"},{"name":"viral tail","type":"related"}],"termid":"GO:0098015"}


id: PBO:0052518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 31","termid":"PBO:0052518"}


id: GO:0006988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete unfolded protein response, cleavage of primary transcript encoding UFP-specific transcription factor (obsolete GO:0006988)","synonyms":[{"name":"unfolded protein response, cleavage of primary transcript encoding UFP-specific transcription factor","type":"exact"}],"termid":"GO:0006988"}


id: MOD:02006
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with a stearoylsulfanyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"stearoylated residue","termid":"MOD:02001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"S-stearoylated residue","termid":"MOD:02006"}


id: PBO:0059426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocardin related transcription factor A","termid":"PBO:0059426"}


id: PBO:0005057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf5","termid":"PBO:0005057"}


id: FYPO:0004103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, and shaped in the form of a sphere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"viable spheroid vegetative cell","termid":"FYPO:0002380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"viable spherical vegetative cell","synonyms":[{"name":"spherical viable cell","type":"exact"},{"name":"viable spherical cell","type":"exact"},{"name":"viable spherical cell during vegetative growth","type":"exact"},{"name":"viable spherical vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004103"}


id: GO:0014023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a solid rod of neurectoderm derived from the neural keel. The neural rod is roughly circular in cross section. Neural rod formation occurs during primary neurulation in teleosts.","definition_xrefs":["GOC:ef","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"primary neural tube formation","termid":"GO:0014020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural rod formation","termid":"GO:0014023"}


id: MONDO:1011744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous and renal vasculopathy, non-human animal","secondary_identifiers":["OMIA:001220"],"termid":"MONDO:1011744","xrefs":{"Monarch":{"xref_id":"1011744"}}}


id: PBO:0040146
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id: MONDO:0004542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poorly differentiated variant of adenosquamous carcinoma that arises from the cervix. It is characterized by the presence of large malignant cells with ground glass cytoplasm and stromal eosinophilic infiltrates.","definition_xrefs":["NCIT:C40212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical adenosquamous carcinoma","termid":"MONDO:0006134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical adenosquamous carcinoma, glassy cell variant","secondary_identifiers":["ONCOTREE:CEGCC","MESH:C536823","UMLS:C1516407","MEDGEN:308943","Orphanet:213833","DOID:8361","ICD10CM:C53.0","GARD:20500"],"synonyms":[{"name":"GCC of the cervix","type":"related"},{"name":"cervical adenosquamous carcinoma, glassy cell variant","type":"exact"},{"name":"glassy cell adenocarcinoma of the uterine cervix","type":"related"},{"name":"glassy cell carcinoma of the cervix","type":"related"},{"name":"glassy cell carcinoma of the cervix uteri","type":"related"},{"name":"glassy cell variant cervical adenosquamous carcinoma","type":"related"}],"termid":"MONDO:0004542","xrefs":{"Monarch":{"xref_id":"0004542"}}}


id: GO:0070164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of adiponectin from a cell.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of adiponectin secretion","termid":"GO:0070163"},{"relation_name":"negatively_regulates","term_name":"adiponectin secretion","termid":"GO:0070162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of adiponectin secretion","synonyms":[{"name":"down regulation of adiponectin secretion","type":"exact"},{"name":"down-regulation of adiponectin secretion","type":"exact"},{"name":"downregulation of adiponectin secretion","type":"exact"},{"name":"inhibition of adiponectin secretion","type":"narrow"}],"termid":"GO:0070164"}


id: PBO:0114109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex WDC repeat subunit Swd1","termid":"PBO:0114109"}


id: PBO:0076162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1P4-STRA6LP-CCDC180 readthrough","termid":"PBO:0076162"}


id: GO:0052237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis in other organism involved in symbiotic interaction (obsolete GO:0052237)","synonyms":[{"name":"aerotaxis in other organism during symbiotic interaction","type":"related"},{"name":"aerotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052237"}


id: MONDO:0700183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reticulum cell sarcoma that occurs in a cat.","definition_xrefs":["NCIT:C135008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"lymphoid system disorder, non-human animal","termid":"MONDO:1011330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline reticulum cell sarcoma","termid":"MONDO:0700183","xrefs":{"Monarch":{"xref_id":"0700183"}}}


id: PBO:0116791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHLSN antisense RNA 1","termid":"PBO:0116791"}


id: FYPO:0006961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of inosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular inosine level","synonyms":[{"name":"increased cellular inosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular inosine level during vegetative growth","type":"exact"},{"name":"increased inosine accumulation","type":"related"}],"termid":"FYPO:0006961"}


id: SO:0001276
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A guanosine base that has been modified.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_guanosine","synonyms":[{"name":"modified guanosine","type":"exact"}],"termid":"SO:0001276"}


id: SO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone of a DNA region of a genome.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"genomic_DNA","termid":"SO:0000991"},{"relation_name":"is_a","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomic_clone","synonyms":[{"name":"genomic clone","type":"exact"}],"termid":"SO:0000040"}


id: MOD:01100
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMP (hydroxymethylphenyl)/TFA adduct","termid":"MOD:01100"}


id: MONDO:0012014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive intermediate Charcot-Marie-Tooth disease type A is a subtype of autosomal recessive intermediate Charcot-Marie-Tooth (CMT) disease characterized by severe, early childhood-onset CMT neuropathy with prominent pes equinovarus deformity and impairment of hand muscles. Nerve conduction velocities usually range between 25-35 m/s and both axonal and demyelinating changes are observed on peripheral nerve pathology.","definition_xrefs":["Orphanet:217055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0017058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease recessive intermediate A","secondary_identifiers":["OMIM:608340","GARD:12453","MEDGEN:334012","DOID:0110201","MESH:C564256","UMLS:C1842197"],"synonyms":[{"name":"CMTRIA","type":"exact"},{"name":"Charcot-Marie-Tooth disease caused by mutation in GDAP1","type":"exact"},{"name":"Charcot-Marie-Tooth disease recessive intermediate type A","type":"exact"},{"name":"Charcot-Marie-Tooth disease, recessive Intermediate type a","type":"exact"},{"name":"Charcot-Marie-Tooth disease, recessive intermediate A","type":"related"},{"name":"Charcot-Marie-Tooth disease, recessive intermediate, A","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy recessive intermediate A","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, recessive Intermediate a","type":"related"},{"name":"GDAP1 Charcot-Marie-Tooth disease","type":"exact"},{"name":"RI-CMT type A","type":"exact"},{"name":"RI-CMTA","type":"exact"},{"name":"Ri-Cmta","type":"related"},{"name":"autosomal recessive intermediate Charcot-Marie-Tooth disease type A","type":"exact"}],"termid":"MONDO:0012014","xrefs":{"Monarch":{"xref_id":"0012014"}}}


id: PBO:0081855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger family member 788, pseudogene","termid":"PBO:0081855"}


id: MONDO:0800441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heart disease that includes congenital heart defects, abnormal cardiac conduction or myopathy. Congenital heart defects consists of any heart disease that is present at birth. Representative examples include atrial septal defect, ventricular septal defect, tetralogy of Fallot, and hypoplastic left heart syndrome.","definition_xrefs":["PMID:20659440","PMID:34214246","PMID:10587520","PMID:20456451","PMID:14607454","PMID:15810002","PMID:16896344","PMID:11714651","PMID:21110066","PMID:21165553","PMID:19948535","PMID:28991257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"NKX2.5-related congenital, conduction and myopathic heart disease","synonyms":[{"name":"NKX2-5-related congenital, conduction and myopathic heart disease","type":"exact"}],"termid":"MONDO:0800441","xrefs":{"Monarch":{"xref_id":"0800441"}}}


id: MONDO:0021061
data:
  {"annotated_genes":["SJAG_04213","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87108,87109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A hereditary neoplastic syndrome in which tumors grow in the nervous system. There are typically 3 main types recognized, but other forms with uncertain etiology exist.","definition_xrefs":["NCIT:C6727","Wikipedia:Neurofibromatosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neurofibromatosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D017253","NANDO:1200226","MEDGEN:58149","NANDO:2201003","DOID:8712","ICD9:237.7","UMLS:C0162678","NANDO:1200225","ICD9:237.70","GARD:10420","ICD9:237.72","SCTID:19133005","ICDO:9540/1","NANDO:1200227","EFO:0008514","ICD9:237.71"],"synonyms":[{"name":"Recklinghausen's neurofibromatosis","type":"exact"},{"name":"acoustic neurofibromatosis","type":"exact"},{"name":"central Neurofibromatosis","type":"exact"},{"name":"neurofibromatosis","type":"exact"},{"name":"neurofibromatosis syndrome","type":"exact"},{"name":"neurofibromatosis type 2","type":"narrow"},{"name":"neurofibromatosis type 4","type":"narrow"},{"name":"neurofibromatosis type IV","type":"narrow"},{"name":"peripheral Neurofibromatosis","type":"exact"},{"name":"type IV neurofibromatosis of riccardi","type":"exact"},{"name":"von Reklinghausen disease","type":"exact"}],"termid":"MONDO:0021061","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0021061"}}}


id: PBO:0041992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 38","termid":"PBO:0041992"}


id: PBO:0026729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_translation_in_response_to_stress_during_vegetative_growth","termid":"PBO:0026729"}


id: PBO:0066187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 10","termid":"PBO:0066187"}


id: PBO:0084504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific recombinase required for double-strand break repair; also required for pairing between homologous chromosomes and for the normal morphogenesis of synaptonemal complex; binds ssDNA and dsDNA, forms helical filaments; potent inhibitor of the ATPase activity of  Srs2p helicase, blocking its ssDNA translocating motor activity and inhibiting its antirecombinase activity; stimulated by Rdh54p; homolog of Rad51p and the bacterial RecA protein","termid":"PBO:0084504"}


id: PBO:0047290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 1","termid":"PBO:0047290"}


id: PBO:0088285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4 kinase plasma membrane scaffold Erf3 partner Ypp1","termid":"PBO:0088285"}


id: GO:0090068
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id: GO:2000410
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id: PBO:0057595
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id: MONDO:0015362
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id: PBO:0034271
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id: PR:Q8TFF8
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id: PBO:0001031
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id: GO:0021990
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id: PBO:0081457
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id: PBO:0005134
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id: PBO:0083709
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id: FYPO:0000252
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id: PBO:0052440
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id: PR:Q9C107
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id: PBO:0031855
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id: MONDO:0100010
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the tendon.","definition_xrefs":["MONDO:patterns/location_top","PMID:19188560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease of the tendon","secondary_identifiers":["MEDGEN:508839","EFO:1001434","MESH:D052256","UMLS:C0151936","SCTID:68172002"],"synonyms":[{"name":"disease of tendon","type":"exact"},{"name":"disease or disorder of tendon","type":"exact"},{"name":"disorder of tendon","type":"exact"},{"name":"tendinopathy","type":"exact"},{"name":"tendon disease","type":"exact"},{"name":"tendon disease or disorder","type":"exact"}],"termid":"MONDO:0100010","xrefs":{"Monarch":{"xref_id":"0100010"}}}


id: MOD:01569
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01569"}


id: PBO:0089555
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Sfb3","termid":"PBO:0089555"}


id: GO:0036125
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id: PBO:0060192
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC12 antisense RNA 1","termid":"PBO:0060192"}


id: FYPO:0001905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the number, structure, and orientation of microtubules in the mitotic spindle are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"part_of","term_name":"normal mitotic spindle","termid":"FYPO:0001399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic spindle microtubules","synonyms":[{"name":"normal mitotic spindle microtubules during vegetative growth","type":"exact"},{"name":"normal spindle microtubules during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001905"}


id: GO:0003194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the sinoatrial valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"sinoatrial valve morphogenesis","termid":"GO:0003185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial valve formation","synonyms":[{"name":"SA valve formation","type":"exact"}],"termid":"GO:0003194"}


id: SO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in 5 prime overhangs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_sticky_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"five prime sticky end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001975"}


id: GO:0032686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of hepatocyte growth factor production.","definition_xrefs":["PMID:1838014","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of hepatocyte growth factor production","termid":"GO:0032646"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"hepatocyte growth factor production","termid":"GO:0032605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatocyte growth factor production","secondary_identifiers":["GO:0048178"],"synonyms":[{"name":"down regulation of hepatocyte growth factor production","type":"exact"},{"name":"down-regulation of hepatocyte growth factor production","type":"exact"},{"name":"downregulation of hepatocyte growth factor production","type":"exact"},{"name":"inhibition of hepatocyte growth factor production","type":"narrow"},{"name":"negative regulation of HGF production","type":"exact"},{"name":"negative regulation of hepatocyte growth factor biosynthetic process","type":"narrow"},{"name":"negative regulation of scatter factor production","type":"exact"}],"termid":"GO:0032686"}


id: PBO:0040589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain and CNC homolog 1","termid":"PBO:0040589"}


id: PBO:0072635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras suppressor protein 1 pseudogene 1","termid":"PBO:0072635"}


id: PBO:0035813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-eMTOC_absent_from_cell","termid":"PBO:0035813"}


id: MONDO:0004073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dentin dysplasia (obsolete MONDO:0004073)","termid":"MONDO:0004073","xrefs":{"Monarch":{"xref_id":"0004073"}}}


id: MONDO:0016750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-cleft palate-abnormal retinal pigmentation syndrome is a rare orofacial clefting syndrome characterized by microcephaly, cleft of the secondary palate and other variable abnormalities, including abnormal retinal pigmentation, facial dysmorphism with hypotelorism and maxillary hypoplasia. Goiter, camptodactyly, abnormal dermatoglyphics and mild intellectual disability may also be associated. There have been no further descriptions in the literature since 1983.","definition_xrefs":["Orphanet:2521"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-cleft palate syndrome","secondary_identifiers":["MEDGEN:419293","SCTID:719394002","UMLS:C2930954","GARD:8623","MESH:C535622"],"synonyms":[{"name":"Halal syndrome","type":"exact"},{"name":"microcephaly cleft palate autosomal dominant","type":"related"},{"name":"microcephaly-cleft palate-abnormal retinal pigmentation syndrome","type":"related"}],"termid":"MONDO:0016750","xrefs":{"Monarch":{"xref_id":"0016750"}}}


id: PBO:0051750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inturned planar cell polarity protein","termid":"PBO:0051750"}


id: GO:0046822
data:
  {"annotated_genes":["SJAG_01805","SJAG_04312","SJAG_01245","SJAG_02592","SJAG_01311","SJAG_04464","SJAG_03453","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[101649,100241,93603,110804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[90643,94166,102180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"regulates","term_name":"nucleocytoplasmic transport","termid":"GO:0006913"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01311":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"regulation of nucleocytoplasmic transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046822","terms_by_termid":{"GO:0042307":null,"GO:0042308":null,"GO:0046827":null}}


id: PR:P0CT79
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2801 gene.","definition_xrefs":["UniProtKB:P0CT79","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.06","synonyms":[{"name":"S33 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps2801","type":"exact"}],"termid":"PR:P0CT79"}


id: GO:0071200
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP6 associated with the channel via interaction with the Kv alpha subunit 4.2.","definition_xrefs":["PMID:12575952","PMID:15911355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"Kv4.2-DPP6 channel complex","secondary_identifiers":["CORUM:603"],"synonyms":[{"name":"Kv4.2-DPPX channel complex","type":"exact"}],"termid":"GO:0071200"}


id: FYPO:0006560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during the G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity during mitotic interphase","termid":"FYPO:0003331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased protein kinase activity during mitotic G1 phase","synonyms":[{"name":"reduced protein kinase activity during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006560"}


id: PBO:0003591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Gsk31 (predicted)","termid":"PBO:0003591"}


id: GO:1903901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of viral life cycle.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18005716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"negatively_regulates","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of viral life cycle","synonyms":[{"name":"down regulation of lytic viral life cycle","type":"related"},{"name":"down regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"down regulation of viral infectious cycle","type":"related"},{"name":"down regulation of viral life cycle","type":"exact"},{"name":"down regulation of viral replication","type":"related"},{"name":"down-regulation of lytic viral life cycle","type":"related"},{"name":"down-regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"down-regulation of viral infectious cycle","type":"related"},{"name":"down-regulation of viral life cycle","type":"exact"},{"name":"down-regulation of viral replication","type":"related"},{"name":"downregulation of lytic viral life cycle","type":"related"},{"name":"downregulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"downregulation of viral infectious cycle","type":"related"},{"name":"downregulation of viral life cycle","type":"exact"},{"name":"downregulation of viral replication","type":"related"},{"name":"inhibition of lytic viral life cycle","type":"related"},{"name":"inhibition of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"inhibition of viral infectious cycle","type":"related"},{"name":"inhibition of viral life cycle","type":"narrow"},{"name":"inhibition of viral replication","type":"related"},{"name":"negative regulation of lytic viral life cycle","type":"related"},{"name":"negative regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"negative regulation of viral infectious cycle","type":"related"},{"name":"negative regulation of viral replication","type":"related"}],"termid":"GO:1903901"}


id: GO:0021657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 2. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","GOC:curators","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 2 morphogenesis","termid":"GO:0021655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 2 formation","termid":"GO:0021657"}


id: PBO:0031891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain protein Grp1 (predicted)","termid":"PBO:0031891"}


id: MONDO:0005361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic esophagitis (EoE) is a chronic, allergic disease of the esophagus characterized clinically by symptoms of esophageal dysfunction (including vomiting, dysphagia, feeding disorders, food impaction and abdominal pain) which persist after treatment with proton pump inhibitors (PPIs).","definition_xrefs":["Orphanet:73247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagitis","termid":"MONDO:0001409"},{"relation_name":"is_a","term_name":"eosinophilic gastrointestinal disease","termid":"MONDO:0018438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"eosinophilic esophagitis","secondary_identifiers":["NCIT:C27105","MedDRA:10064212","MEDGEN:83318","ICD9:530.13","NANDO:1200456","MESH:D057765","DOID:13922","EFO:0004232","ICD10CM:K20.0","SCTID:235599003","UMLS:C0341106"],"synonyms":[{"name":"EoE","type":"exact"}],"termid":"MONDO:0005361","xrefs":{"Monarch":{"xref_id":"0005361"}}}


id: PATO:0000377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000377 frequency value (obsolete PATO:0000377)","termid":"PATO:0000377"}


id: PBO:0055797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a) like 1","termid":"PBO:0055797"}


id: PBO:0074752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 111","termid":"PBO:0074752"}


id: MONDO:0019807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesocardia","secondary_identifiers":["HP:0011599","icd11.foundation:1251061251","ICD9:746.87","Orphanet:95443","GARD:19259","MEDGEN:488817","UMLS:C0265865","SCTID:16567006"],"synonyms":[{"name":"Midline heart","type":"exact"},{"name":"mesocardia","type":"exact"},{"name":"mesocardia (disease)","type":"exact"}],"termid":"MONDO:0019807","xrefs":{"Monarch":{"xref_id":"0019807"}}}


id: PBO:0043580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XII alpha 1 chain","termid":"PBO:0043580"}


id: PR:O42915
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin fusion degradation protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12555:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin fusion degradation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.09c","secondary_identifiers":["UniProtKB:O42915"],"synonyms":[{"name":"SPBC16A3.09c","type":"related"},{"name":"Spom972h-UFD1L","type":"exact"},{"name":"UB fusion protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42915"}


id: FYPO:0002807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing arsenate ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth on arsenic","termid":"FYPO:0004368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on arsenate","synonyms":[{"name":"normal cell population growth in presence of arsenate","type":"exact"},{"name":"normal cell population growth on arsenate","type":"exact"},{"name":"normal cell population growth on arsenate ion","type":"exact"},{"name":"normal cellular response to arsenate","type":"related"},{"name":"normal growth on arsenate ions","type":"exact"},{"name":"normal vegetative cell population growth on arsenate","type":"exact"}],"termid":"FYPO:0002807"}


id: GO:0048857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a neural nucleus from its initial condition to its mature state. A neural nucleus is an anatomical structure consisting of a discrete aggregate of neuronal soma.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural nucleus development","termid":"GO:0048857"}


id: MONDO:0000268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphoid interstitial pneumonia (obsolete MONDO:0000268)","termid":"MONDO:0000268","xrefs":{"Monarch":{"xref_id":"0000268"}}}


id: PBO:0108967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIMAP1 family member D","termid":"PBO:0108967"}


id: PBO:0003784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor EF-Tu Tuf1","termid":"PBO:0003784"}


id: FYPO:0000241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which any process that affects the physical integrity, replication, or segregation of genomic DNA is abnormal. Encompasses effects on DNA metabolism, chromosome organization, the spindle assembly checkpoint, and any DNA integrity checkpoint.","definition_xrefs":["PomBase:vw","PomBase:mah","PomBase:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete genome stability defects (obsolete FYPO:0000241)","synonyms":[{"name":"genome stability defects during mitotic cell cycle","type":"related"},{"name":"genome stability defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000241"}


id: PBO:0041099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and WD repeat domain containing 3","termid":"PBO:0041099"}


id: PBO:0116770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYT1 antisense RNA 1","termid":"PBO:0116770"}


id: PBO:0010008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation RNA helicase Sum3","termid":"PBO:0010008"}


id: PBO:0077578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and immunoglobulin domain containing 3","termid":"PBO:0077578"}


id: PBO:0084778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane receptor for cytosolic ribosomes; integral protein of the outer membrane that interacts with the nascent chain-associated complex (NAC) bound to ribosomes, contributing to co-translational mitochondrial import; interacts with porin (Por1p) and Om45p; abundance is decreased in cells grown in glucose relative to other carbon sources","termid":"PBO:0084778"}


id: PBO:0046127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4 gamma 1","termid":"PBO:0046127"}


id: PBO:0069521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 790, pseudogene","termid":"PBO:0069521"}


id: PBO:0077623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 15B","termid":"PBO:0077623"}


id: MONDO:0971154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic porphyria","termid":"MONDO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatic cutaneous porphyria","secondary_identifiers":["Orphanet:659698"],"termid":"MONDO:0971154","xrefs":{"Monarch":{"xref_id":"0971154"}}}


id: PBO:0091724
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by D. melanogaster CDC2","termid":"PBO:0091724"}


id: PBO:0016920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR96","termid":"PBO:0016920"}


id: internal:related
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related","termid":"internal:related"}


id: GO:0015374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neutral/basic amino acid(out) + Na+(out) + Cl-(out) = neutral/basic amino acid(in) + Na+(in) + Cl-(in).","definition_xrefs":["TC:2.A.22.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"neutral, basic amino acid:sodium:chloride symporter activity","synonyms":[{"name":"neutral, cationic amino acid:sodium:chloride symporter activity","type":"related"}],"termid":"GO:0015374"}


id: FYPO:0000868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal histone H3-K9 dimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K9 dimethylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me2 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000868"}


id: MONDO:0002195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, precancerous, or malignant neoplasm that arises from the squamous epithelium of the vulva. Representative examples include vestibular papilloma, intraepithelial neoplasia, and squamous cell carcinoma.","definition_xrefs":["NCIT:C40283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"},{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar squamous neoplasm","secondary_identifiers":["UMLS:C1520097","MEDGEN:276998","DOID:2072"],"synonyms":[{"name":"mammalian vulva squamous cell neoplasm","type":"exact"},{"name":"vulvar squamous neoplasm","type":"exact"},{"name":"vulvar squamous tumor","type":"exact"},{"name":"vulvar squamous tumour","type":"exact"}],"termid":"MONDO:0002195","xrefs":{"Monarch":{"xref_id":"0002195"}}}


id: PBO:0113411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L24B; forms two bridges within ribosome, stimulates translation initiation and elongation; homologous to mammalian ribosomal protein L24, no bacterial homolog; RPL24B has a paralog, RPL24A, that arose from the whole genome duplication","termid":"PBO:0113411"}


id: PBO:0027343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_primase_activity","termid":"PBO:0027343"}


id: MONDO:0010803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eiken syndrome is a rare familial skeletal dysplasia characterized by multiple epiphyseal dysplasia, with extremely retarded ossification. It has been described in 6 members of a unique consanguineous family.","definition_xrefs":["Orphanet:79106"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with defective bone mineralization (obsolete MONDO:0019705)","termid":"MONDO:0019705"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eiken syndrome","secondary_identifiers":["OMIM:600002","MEDGEN:325097","GARD:16698","DOID:0111732","icd11.foundation:467339994","UMLS:C1838779","SCTID:720863002","MESH:C564010"],"synonyms":[{"name":"Eiken skeletal dysplasia","type":"related"},{"name":"Eiken syndrome","type":"exact"},{"name":"bone modeling defect of hands and feet","type":"related"},{"name":"bone modelling defect of hands and feet","type":"related"}],"termid":"MONDO:0010803","xrefs":{"Monarch":{"xref_id":"0010803"}}}


id: GO:1905717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cornification.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26014679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of cornification","termid":"GO:1905715"},{"relation_name":"positively_regulates","term_name":"cornification","termid":"GO:0070268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cornification","synonyms":[{"name":"activation of cornification","type":"narrow"},{"name":"up regulation of cornification","type":"exact"},{"name":"up-regulation of cornification","type":"exact"},{"name":"upregulation of cornification","type":"exact"}],"termid":"GO:1905717"}


id: PBO:0043848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Z","termid":"PBO:0043848"}


id: PBO:0116729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPTF associated chromatin complex component 1","termid":"PBO:0116729"}


id: GO:0023017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via a diffusible molecule.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via diffusible molecule (obsolete GO:0023017)","synonyms":[{"name":"signal transmission via diffusible molecule","type":"exact"},{"name":"signaling via diffusible mediator","type":"exact"}],"termid":"GO:0023017"}


id: PBO:0081606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 529","termid":"PBO:0081606"}


id: GO:1900016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytokine production involved in inflammatory response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in inflammatory response","termid":"GO:1900015"},{"relation_name":"negatively_regulates","term_name":"cytokine production involved in inflammatory response","termid":"GO:0002534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of cytokine production involved in inflammatory response","synonyms":[{"name":"down regulation of cytokine production involved in acute inflammatory response","type":"broad"},{"name":"down regulation of cytokine production involved in inflammatory response","type":"related"},{"name":"negative regulation of cytokine production involved in acute inflammatory response","type":"narrow"}],"termid":"GO:1900016"}


id: GO:0060782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation that contributes to the progression of the prostate gland over time. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:dph","PMID:12221011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"regulates","term_name":"mesenchymal cell proliferation involved in prostate gland development","termid":"GO:0060781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell proliferation involved in prostate gland development","termid":"GO:0060782"}


id: PBO:0073556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHC adaptor protein 1","termid":"PBO:0073556"}


id: GO:0018341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form peptidyl-N6-pyruvic acid 2-iminyl-L-lysine.","definition_xrefs":["PSI-MOD:00292"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine modification to peptidyl-N6-pyruvic acid 2-iminyl-L-lysine (obsolete GO:0018341)","synonyms":[{"name":"peptidyl-N6-pyruvic acid 2-iminyl-L-lysine anabolism","type":"exact"},{"name":"peptidyl-N6-pyruvic acid 2-iminyl-L-lysine biosynthesis","type":"exact"},{"name":"peptidyl-N6-pyruvic acid 2-iminyl-L-lysine biosynthetic process","type":"exact"},{"name":"peptidyl-N6-pyruvic acid 2-iminyl-L-lysine formation","type":"exact"},{"name":"peptidyl-N6-pyruvic acid 2-iminyl-L-lysine synthesis","type":"exact"}],"termid":"GO:0018341"}


id: PBO:0050628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 2 binding protein","termid":"PBO:0050628"}


id: PBO:0051217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 6-1","termid":"PBO:0051217"}


id: PBO:0051733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 4 pseudogene 2","termid":"PBO:0051733"}


id: PBO:0059137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 4","termid":"PBO:0059137"}


id: GO:0043910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + factor gamma-F420-2 + H+ = coenzyme F390-A + diphosphate.","definition_xrefs":["PMID:7957247","PMID:8550473","GOC:jl","MetaCyc:RXN-9385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"ATP:coenzyme F420 adenylyltransferase activity","synonyms":[{"name":"ATP:coenzyme F420 adenyltransferase activity","type":"exact"},{"name":"coenzyme F390-A synthetase activity","type":"exact"}],"termid":"GO:0043910"}


id: PBO:0083930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fungal-specific protein of unknown function; induced in respiratory-deficient cells; YAR068W has a paralog, YHR214W-A, that arose from a segmental duplication","termid":"PBO:0083930"}


id: PBO:0069992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1287, pseudogene","termid":"PBO:0069992"}


id: GO:0050595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-deoxyloganin + O2 + reduced [NADPH-hemoprotein reductase] = H+ + H2O + loganin + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["PMID:11524113","RHEA:11452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"7-deoxyloganin 7-hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.13.74-RXN"],"termid":"GO:0050595"}


id: MONDO:0022623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK4 linked melanoma","termid":"MONDO:0022623","xrefs":{"Monarch":{"xref_id":"0022623"}}}


id: MONDO:0002145
data:
  {"annotated_genes":["SJAG_04337","SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009916"},{"annotations":[86009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010814"}]},"cv_name":"mondo","definition":"A congenital disorder characterized by abnormalities in the development of the sexual characteristics.","definition_xrefs":["NCIT:C103186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal disorder","termid":"MONDO:0002259"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00630":null,"SJAG_04337":null},"genotype_count":0,"is_obsolete":false,"name":"disorder of sexual differentiation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:1923","GTR:AN1172969","Orphanet:90771","NANDO:2100140","MEDGEN:415936","MESH:D012734","SCTID:39179006","MedDRA:10070597","UMLS:C2930619"],"synonyms":[{"name":"CARD","type":"broad"},{"name":"DSD","type":"broad"},{"name":"conditions affecting reproductive development","type":"exact"},{"name":"differences of sex development","type":"exact"},{"name":"disorder of sex development","type":"exact"},{"name":"disorder of sex differentiation","type":"exact"},{"name":"disorder of sexual differentiation","type":"exact"},{"name":"disorders of sex development","type":"exact"},{"name":"disorders of sex development (DSD)","type":"related"},{"name":"intersex","type":"exact"},{"name":"intersex conditions","type":"exact"},{"name":"sex differentiation disease","type":"exact"},{"name":"sex differentiation disorder","type":"exact"},{"name":"sexual differentiation disorder","type":"exact"}],"termid":"MONDO:0002145","terms_by_termid":{"MONDO:0009916":null,"MONDO:0010814":null},"xrefs":{"Monarch":{"xref_id":"0002145"}}}


id: MONDO:0007705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"Heinz body anemia","secondary_identifiers":["HP:0005511","MedDRA:10002058","MEDGEN:148583","MESH:C563030","DOID:0111363","OMIM:140700","Orphanet:178330","UMLS:C0700299"],"synonyms":[{"name":"Heinz body anemias","type":"related"},{"name":"Heinz body anemias, alpha-","type":"exact"}],"termid":"MONDO:0007705","xrefs":{"Monarch":{"xref_id":"0007705"}}}


id: PBO:0086440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative kinase with similarity to the PRK/URK/PANK kinase subfamily; the PRK/URK/PANK subfamily of P-loop kinases is also known as phosphoribulokinase/uridine kinase/bacterial pantothenate kinase","termid":"PBO:0086440"}


id: MONDO:0005185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An older, deprecated term that encompassed three major types of autoimmune or autoinflammatory arthritis in children: systemic-onset, pauciarticular, or polyarticular arthritis. The juvenile rheumatoid arthritis classification system has been replaced by the International League of Associations for Rheumatology (ILAR) juvenile idiopathic arthritis classification system.","definition_xrefs":["NCIT:C27179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatoid arthritis","termid":"MONDO:0008383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"chronic childhood arthritis","secondary_identifiers":["Wikipedia:Juvenile_idiopathic_arthritis","SCTID:410793008"],"synonyms":[{"name":"JRA","type":"exact"},{"name":"Juvenile rheumatoid arthritis","type":"exact"},{"name":"Juvenile rheumatoid arthritis (AQ)","type":"exact"}],"termid":"MONDO:0005185","xrefs":{"Monarch":{"xref_id":"0005185"}}}


id: GO:0019854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-ascorbic acid; L-ascorbic acid ionizes to give L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, which is required as a cofactor in the oxidation of prolyl residues to hydroxyprolyl, and other reactions.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ascorbic acid metabolic process","termid":"GO:0019852"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0005975","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"L-ascorbic acid catabolic process","secondary_identifiers":["MetaCyc:PWY0-301"],"synonyms":[{"name":"L-ascorbic acid breakdown","type":"exact"},{"name":"L-ascorbic acid catabolism","type":"exact"},{"name":"L-ascorbic acid degradation","type":"exact"},{"name":"ascorbate catabolic process","type":"exact"},{"name":"ascorbate catabolism","type":"exact"},{"name":"vitamin C catabolic process","type":"exact"},{"name":"vitamin C catabolism","type":"exact"}],"termid":"GO:0019854"}


id: GO:0120537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-demethylubiquinone + S-adenosyl-L-methionine = a ubiquinone + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:38425362","RHEA:81215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"3-demethylubiquinone 3-O-methyltransferase activity","termid":"GO:0120537"}


id: PBO:0078136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 15 (pseudogene)","termid":"PBO:0078136"}


id: PBO:0018289
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mid1 function is not conserved between pombe and japonicus","termid":"PBO:0018289"}


id: PBO:0048111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 1","termid":"PBO:0048111"}


id: MONDO:0006915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases characterized by injury or dysfunction involving multiple peripheral nerves and nerve roots. The process may primarily affect myelin or nerve axons. Two of the more common demyelinating forms are acute inflammatory polyradiculopathy (guillain-barre syndrome) and polyradiculoneuropathy, chronic inflammatory demyelinating. Polyradiculoneuritis refers to inflammation of multiple peripheral nerves and spinal nerve roots.","definition_xrefs":["MESH:D011129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"},{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"polyradiculoneuropathy","secondary_identifiers":["MEDGEN:46012","DOID:4308","EFO:1001116","SCTID:128078004","UMLS:C0032587"],"termid":"MONDO:0006915","xrefs":{"Monarch":{"xref_id":"0006915"}}}


id: PBO:0084211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homocitrate synthase isozyme; catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, which is the first step in the lysine biosynthesis pathway; LYS21 has a paralog, LYS20, that arose from the whole genome duplication","termid":"PBO:0084211"}


id: FYPO:0001343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA replication is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic DNA replication","synonyms":[{"name":"abnormal DNA replication during mitotic cell cycle","type":"exact"},{"name":"abnormal DNA replication during vegetative growth","type":"exact"},{"name":"abnormal DNA-dependent DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0001343"}


id: GO:2000903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cellooligosaccharide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"cellooligosaccharide metabolic process","termid":"GO:2000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellooligosaccharide catabolic process","synonyms":[{"name":"cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000903"}


id: MONDO:0010285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability, Abidi type is characterized by X-linked intellectual deficit and mild variable manifestations, including short stature, small head circumference, sloping forehead, hearing loss, abnormally shaped ears, and small testes. It has been described in eight affected males from three generations.","definition_xrefs":["Orphanet:85273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability Abidi type","secondary_identifiers":["DOID:0060818","GARD:9157","MESH:C535556","OMIM:300262","MEDGEN:337376","UMLS:C1846056"],"synonyms":[{"name":"ABIDI X-linked intellectual disability syndrome","type":"related"},{"name":"ABIDI X-linked mental retardation syndrome","type":"related"},{"name":"MRXSAB","type":"exact"},{"name":"X-linked intellectual disability, Abidi type","type":"related"},{"name":"intellectual disability X-linked Abidi type","type":"related"},{"name":"intellectual disability, X-linked syndromic, Abidi type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Abidi type","type":"related"},{"name":"mental retardation, X-linked syndromic, Abidi type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Abidi type","type":"related"},{"name":"short stature, small head circumference, sloping forehead, hearing loss, cupped ears and small testes","type":"related"},{"name":"syndromic X-linked intellectual disability Abidi type","type":"exact"},{"name":"syndromic X-linked mental retardation Abidi type","type":"exact"}],"termid":"MONDO:0010285","xrefs":{"Monarch":{"xref_id":"0010285"}}}


id: PBO:0060993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal hypoxia inducible, placenta associated","termid":"PBO:0060993"}


id: PBO:0029287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_Mmi1_focus","termid":"PBO:0029287"}


id: PBO:0036441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex actin-like protein Arp5","termid":"PBO:0036441"}


id: PBO:0052446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 2 pseudogene 3","termid":"PBO:0052446"}


id: GO:0003010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within voluntary skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the voluntary skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and it is under voluntary control. Voluntary skeletal muscle is skeletal muscle that is under conscious control.","definition_xrefs":["GOC:mtg_muscle","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle contraction","termid":"GO:0003009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}


id: PBO:0076523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 36","termid":"PBO:0076523"}


id: MONDO:0014721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary spherocytosis type 2 (obsolete MONDO:0014721)","termid":"MONDO:0014721","xrefs":{"Monarch":{"xref_id":"0014721"}}}


id: PBO:0048305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 15","termid":"PBO:0048305"}


id: PBO:0040279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATOX1 antisense RNA 1","termid":"PBO:0040279"}


id: MONDO:0700019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 12 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 disorder","termid":"MONDO:0700019","xrefs":{"Monarch":{"xref_id":"0700019"}}}


id: SO:0001278
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1-methylinosine is a modified inosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_inosine","termid":"SO:0001274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methylinosine","secondary_identifiers":["RNAMOD:018"],"synonyms":[{"name":"1-methylinosine","type":"exact"},{"name":"m1I","type":"exact"},{"name":"one methylinosine","type":"exact"}],"termid":"SO:0001278"}


id: PBO:0057587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 891b","termid":"PBO:0057587"}


id: PBO:0068098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 405","termid":"PBO:0068098"}


id: PBO:0075653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splA/ryanodine receptor domain and SOCS box containing 2","termid":"PBO:0075653"}


id: PBO:0038608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 4","termid":"PBO:0038608"}


id: GO:0045033
data:
  {"annotated_genes":["SJAG_04315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106489],"is_not":false,"summary":null,"term":"GO:0045033"}]},"cv_name":"biological_process","definition":"The acquisition of peroxisomes by daughter cells from the mother cell after replication. In Saccharomyces cerevisiae, the number of peroxisomes cells is fairly constant; a subset of the organelles are targeted and segregated to the bud in a highly ordered, vectorial process. Efficient segregation of peroxisomes from mother to bud is dependent on the actin cytoskeleton, and active movement of peroxisomes along actin filaments is driven by the class V myosin motor protein, Myo2p.","definition_xrefs":["PMID:11733545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"},{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0007031","GO:0008150"],"is_obsolete":false,"name":"peroxisome inheritance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045033","terms_by_termid":{"GO:0045033":null}}


id: PBO:0089218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex large subunit Toa1","termid":"PBO:0089218"}


id: GO:1904983
data:
  {"annotated_genes":["SJAG_04984","SJAG_00626"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69720,98023],"is_not":false,"summary":null,"term":"GO:1904983"}]},"cv_name":"biological_process","definition":"The process in which glycine is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["PMID:26821380","GO_REF:0000078","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"glycine transport","termid":"GO:0015816"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00626":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"glycine import into mitochondrion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"transmembrane glycine transport from cytosol to mitochondrion","type":"exact"}],"termid":"GO:1904983","terms_by_termid":{"GO:1904983":null}}


id: PATO:0001664
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A solubility which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"soluble in","termid":"PATO:0001537"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased solubility","synonyms":[{"name":"low solubility","type":"exact"}],"termid":"PATO:0001664"}


id: PBO:0068992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 236, pseudogene","termid":"PBO:0068992"}


id: GO:0003817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of component factor B (Arg-Lys) when in complex with C3b or with cobra venom factor (CVF).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement factor D activity (obsolete GO:0003817)","synonyms":[{"name":"C3 convertase activator activity","type":"related"},{"name":"C3 proactivator convertase activity","type":"related"},{"name":"adipsin","type":"exact"},{"name":"complement factor D activity","type":"exact"},{"name":"factor D","type":"related"},{"name":"factor D (complement)","type":"related"},{"name":"properdin factor D esterase activity","type":"related"}],"termid":"GO:0003817"}


id: GO:0034649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of a methyl group from monomethylated lysine at position 4 of the histone H3 protein.","definition_xrefs":["PMID:16223729","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone demethylase activity (H3-monomethyl-K4 specific) (obsolete GO:0034649)","synonyms":[{"name":"histone demethylase activity (H3-K4-me1 specific)","type":"exact"}],"termid":"GO:0034649"}


id: PBO:0066550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 13","termid":"PBO:0066550"}


id: MONDO:0012851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis/osteoporosis, hypophosphatemic","termid":"MONDO:0000079"},{"relation_name":"is_a","term_name":"impaired renal function disease","termid":"MONDO:0001343"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005240"],"is_obsolete":false,"name":"hypophosphatemic nephrolithiasis/osteoporosis 2","secondary_identifiers":["DOID:0080078","GARD:18347","MEDGEN:394127","MESH:C567362","OMIM:612287","UMLS:C2676782"],"synonyms":[{"name":"NPHLOP2","type":"related"},{"name":"hypophosphatemic nephrolithiasis/osteoporosis type 2","type":"exact"},{"name":"nephrolithiasis/osteoporosis, hypophosphatemic, 2","type":"related"},{"name":"nephrolithiasis/osteoporosis, hypophosphatemic, type 2","type":"exact"}],"termid":"MONDO:0012851","xrefs":{"Monarch":{"xref_id":"0012851"}}}


id: MONDO:0010314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral perisylvian polymicrogyria","termid":"MONDO:0020340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"polymicrogyria, bilateral perisylvian, X-linked","secondary_identifiers":["OMIM:300388","SCTID:438583008","GARD:15256"],"synonyms":[{"name":"BPP","type":"related"},{"name":"BPPX","type":"exact"},{"name":"PMGX","type":"related"},{"name":"perisylvian syndrome, congenital bilateral","type":"related"},{"name":"polymicrogyria, bilateral perisylvian, X-linked","type":"exact"},{"name":"polymicrogyria, bilateral perisylvian, X-linked dominant","type":"exact"}],"termid":"MONDO:0010314","xrefs":{"Monarch":{"xref_id":"0010314"}}}


id: FYECO:0000342
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ICRF-193 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ICRF-193","termid":"FYECO:0000342"}


id: PBO:0112987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase required for biogenesis of small ribosomal subunit; conserved 18S rRNA cytosine acetyltransferase that modifies tRNAs assisted by adaptor Tan1p; responsible for incorporation of N4-acetylcytidine into mRNAs; human homolog NAT10 implicated in several types of cancer and premature aging","termid":"PBO:0112987"}


id: CHEBI:15361
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A 2-oxo monocarboxylic acid anion that is the conjugate base of pyruvic acid, arising from deprotonation of the carboxy group.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate","termid":"CHEBI:15361"}


id: PBO:0002798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal transforming acidic coiled-coil (TACC) protein ortholog Alp7","termid":"PBO:0002798"}


id: PBO:0043528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coenzyme A synthase","termid":"PBO:0043528"}


id: GO:0042462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve.","definition_xrefs":["ISBN:0192800981","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell development","termid":"GO:0042461"},{"relation_name":"part_of","term_name":"eye photoreceptor cell differentiation","termid":"GO:0001754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye photoreceptor cell development","termid":"GO:0042462"}


id: PBO:0001352
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rhp57delta double mutant showed a repair profile very similar to that to the rhp51delta single mutant","termid":"PBO:0001352"}


id: PBO:0080480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault RNA 3-1, pseudogene","termid":"PBO:0080480"}


id: GO:0006355
data:
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id: FYPO:0005891
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id: PBO:0042882
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id: GO:0141157
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id: GO:0015531
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id: _global:position_of
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id: PBO:0086965
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id: PBO:0090109
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id: PBO:0073409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 12","termid":"PBO:0073409"}


id: MONDO:0021151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary vs non-hereditary etiology","termid":"MONDO:0021149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-genetic","synonyms":[{"name":"non-genomic","type":"related"}],"termid":"MONDO:0021151","xrefs":{"Monarch":{"xref_id":"0021151"}}}


id: GO:0001580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for a bitter taste stimulus to be received and converted to a molecular signal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception of taste","termid":"GO:0050912"},{"relation_name":"part_of","term_name":"sensory perception of bitter taste","termid":"GO:0050913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of bitter taste","synonyms":[{"name":"bitter taste detection","type":"exact"},{"name":"perception of bitter taste, detection of chemical stimulus","type":"exact"},{"name":"perception of bitter taste, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of bitter taste","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of bitter taste","type":"exact"},{"name":"sensory transduction of bitter taste","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of bitter taste","type":"exact"}],"termid":"GO:0001580"}


id: PBO:0054202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1582","termid":"PBO:0054202"}


id: PBO:0079857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B6 (pseudogene)","termid":"PBO:0079857"}


id: PBO:0066586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho related BTB domain containing 1","termid":"PBO:0066586"}


id: GO:0010986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of lipoprotein particle clearance. Lipoprotein particle clearance is the process in which a lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"}


id: PBO:0044651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 2","termid":"PBO:0044651"}


id: PBO:0065986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1M pseudogene","termid":"PBO:0065986"}


id: PBO:0034488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_boundary_element_IRC1L","termid":"PBO:0034488"}


id: PBO:0088996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Ltc1","termid":"PBO:0088996"}


id: PBO:0065022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 3 pseudogene 1","termid":"PBO:0065022"}


id: FYPO:0003378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division, in which homologous chromosomes are normally paired and segregated from each other, does not occur.","definition_xrefs":["GO:0007127","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished meiosis","termid":"FYPO:0000474"},{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abolished meiosis I","synonyms":[{"name":"abolished first meiotic nuclear division","type":"exact"},{"name":"absent meiosis I","type":"exact"},{"name":"meiosis I abolished","type":"exact"},{"name":"meiosis I: absent","type":"exact"}],"termid":"FYPO:0003378"}


id: PATO:0001324
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's being symmetric about a plane running from its frontal end to its caudal end (head to tail), and has nearly identical right and left halves.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Bilateral_symmetry"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetry","termid":"PATO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral symmetry","synonyms":[{"name":"left-right symmetry","type":"exact"}],"termid":"PATO:0001324"}


id: PBO:0045676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 2 heavy chain 1","termid":"PBO:0045676"}


id: GO:0051890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"is_a","term_name":"regulation of stem cell differentiation","termid":"GO:2000736"},{"relation_name":"regulates","term_name":"cardioblast differentiation","termid":"GO:0010002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardioblast differentiation","termid":"GO:0051890"}


id: PBO:0077614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 5","termid":"PBO:0077614"}


id: GO:0075310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporangium development, a process that leads to the formation of sporangium, a single-celled or many-celled structure in which spores are produced, as in fungi, algae, mosses, and ferns, gymnosperms, angiosperms.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"sporangium development","termid":"GO:0043582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporangium development","termid":"GO:0075310"}


id: MONDO:0100518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of attention deficit-hyperactivity disorder that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attention deficit-hyperactivity disorder","termid":"MONDO:0007743"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary attention deficit-hyperactivity disorder","secondary_identifiers":["OMIM:143465"],"termid":"MONDO:0100518","xrefs":{"Monarch":{"xref_id":"0100518"}}}


id: PBO:0040481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 2 like","termid":"PBO:0040481"}


id: PBO:0011434
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae LHP1","termid":"PBO:0011434"}


id: PBO:0002046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha catalytic subunit","termid":"PBO:0002046"}


id: MONDO:0008762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive Alport syndrome isa genetic condition characterized by kidney disease, hearing loss, and eye abnormalities. Most affected individuals experience progressive loss of kidney function, usually resulting in end-stage kidney disease. People with Alport syndrome frequently develop sensorineural hearing loss in late childhood or early adolescence. The eye abnormalities seen in this condition seldom lead to vision loss. Alport syndrome can have different patterns of inheritance. About15 percentof Alport syndrome cases are inherited in an autosomal recessive pattern and are caused bymutations in both copies of the COL4A3 or COL4A4 genes. Treatment is based on the symptoms present and may include medications to delay the progression of kidney disease. In most cases, a kidney transplant is eventually needed.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Alport syndrome","termid":"MONDO:0018965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"autosomal recessive Alport syndrome","secondary_identifiers":["GARD:625","SCTID:717767009","Orphanet:88919","DOID:0110033","MedDRA:10001843","OMIM:203780","UMLS:C4746745","MEDGEN:1648334"],"synonyms":[{"name":"Alport syndrome 2, autosomal recessive","type":"exact"},{"name":"Alport syndrome autosomal recessive","type":"related"},{"name":"Alport syndrome recessive type","type":"related"},{"name":"Alport syndrome, autosomal recessive","type":"exact"},{"name":"nephropathy and deafness","type":"related"}],"termid":"MONDO:0008762","xrefs":{"Monarch":{"xref_id":"0008762"}}}


id: GO:0043888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + sn-3-O-(geranylgeranyl)glycerol 1-phosphate = 2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate + diphosphate.","definition_xrefs":["PMID:15356000","PMID:16494480"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase activity (obsolete GO:0043888)","synonyms":[{"name":"2,3-dGGGPS","type":"exact"},{"name":"DGGGP synthase activity","type":"exact"},{"name":"DGGGPS","type":"exact"},{"name":"UbiA","type":"related"}],"termid":"GO:0043888"}


id: PBO:0089833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Mak5","termid":"PBO:0089833"}


id: MONDO:1011083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in llama.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, llama","secondary_identifiers":["OMIA:001033-9844"],"termid":"MONDO:1011083","xrefs":{"Monarch":{"xref_id":"1011083"}}}


id: GO:1904659
data:
  {"annotated_genes":["SJAG_00057","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110439,113964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046323"},{"annotations":[117006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"}]},"cv_name":"biological_process","definition":"The process in which D-glucose is transported across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:9090050","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"D-glucose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015758"],"synonyms":[{"name":"glucose transmembrane transport","type":"exact"},{"name":"glucose transport","type":"related"}],"termid":"GO:1904659","terms_by_termid":{"GO:0046323":null,"GO:0098708":null}}


id: PR:O42651
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg17 gene.","definition_xrefs":["UniProtKB:O42651","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.11c","synonyms":[{"name":"Spom972h-atg17","type":"exact"}],"termid":"PR:O42651"}


