# terms

id: PBO:0027958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pyridoxine:NADP_4-dehydrogenase_activity","termid":"PBO:0027958"}


id: PBO:0018263
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae BTS1","termid":"PBO:0018263"}


id: PBO:0041591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 5A","termid":"PBO:0041591"}


id: PR:O94394
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC126.01c gene.","definition_xrefs":["UniProtKB:O94394","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C126.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.01c","synonyms":[{"name":"Spom972h-SPCC126.01c","type":"exact"}],"termid":"PR:O94394"}


id: PBO:0030276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_processing","termid":"PBO:0030276"}


id: PBO:0036027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_deubiquitination_following_cellular_response_to_hydroxyurea_during_vegetative_growth","termid":"PBO:0036027"}


id: PBO:0111940
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip2 subfamily","termid":"PBO:0111940"}


id: GO:1990643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte colony-stimulating factor stimulus.","definition_xrefs":["PMID:9488469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to granulocyte colony-stimulating factor","termid":"GO:1990638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to granulocyte colony-stimulating factor","termid":"GO:1990643"}


id: PBO:0077633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and ubiquitin like domain containing 1","termid":"PBO:0077633"}


id: GO:0047907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide = (Z)-2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide.","definition_xrefs":["EC:5.2.1.6","RHEA:21848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"furylfuramide isomerase activity","secondary_identifiers":["MetaCyc:FURYLFURAMIDE-ISOMERASE-RXN","KEGG_REACTION:R04538"],"synonyms":[{"name":"2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide cis-trans-isomerase activity","type":"related"}],"termid":"GO:0047907"}


id: GO:0097340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents the activation of an inactive cysteine-type endopeptidase.","definition_xrefs":["GOC:mtg_apoptosis","PMID:20383739"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibition of cysteine-type endopeptidase activity (obsolete GO:0097340)","synonyms":[{"name":"inhibition of caspase activity","type":"narrow"},{"name":"prevention of caspase activity","type":"narrow"},{"name":"prevention of cysteine-type endopeptidase activity","type":"exact"}],"termid":"GO:0097340"}


id: PBO:0084964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myristoylated subunit of the ESCRT-III complex; the endosomal sorting complex required for transport of transmembrane proteins into the multivesicular body pathway to the lysosomal/vacuolar lumen; cytoplasmic protein recruited to endosomal membranes","termid":"PBO:0084964"}


id: GO:0006881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining iron ions in an extracellular area such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular sequestering of iron ion (obsolete GO:0006881)","synonyms":[{"name":"extracellular iron ion retention","type":"exact"},{"name":"extracellular iron ion sequestering","type":"exact"},{"name":"extracellular iron ion sequestration","type":"exact"},{"name":"extracellular iron ion storage","type":"exact"},{"name":"extracellular retention of iron ion","type":"exact"},{"name":"extracellular sequestration of iron ion","type":"exact"},{"name":"extracellular storage of iron ion","type":"exact"}],"termid":"GO:0006881"}


id: GO:0050045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-beta-D-glucosyl-D-glucose + phosphate = D-glucose + alpha-D-glucose 1-phosphate.","definition_xrefs":["EC:2.4.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"laminaribiose phosphorylase activity","secondary_identifiers":["RHEA:16617","MetaCyc:LAMINARIBIOSE-PHOSPHORYLASE-RXN"],"synonyms":[{"name":"3-beta-D-glucosyl-D-glucose:phosphate alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0050045"}


id: FYPO:0007828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin contractile ring maturation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:1902406","PMID:34133210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring organization","termid":"FYPO:0007827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal actomyosin contractile ring maturation","synonyms":[{"name":"normal actomyosin contractile ring maintenance","type":"exact"},{"name":"normal actomyosin contractile ring maturation during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring maturation during vegetative growth","type":"exact"},{"name":"normal contractile ring maturation","type":"exact"},{"name":"normal mitotic actomyosin contractile ring maintenance","type":"exact"}],"termid":"FYPO:0007828"}


id: PBO:0026662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_fragmented_DNA_during_cellular_response_to_ionizing_radiation","termid":"PBO:0026662"}


id: MONDO:0006792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Purplish or brownish red discoloration of the skin associated with increase in circulating polyclonal globulins, usually gamma-globulins. This syndrome often occurs on the legs of women aged 20 to 40 years.","definition_xrefs":["MESH:D011694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purpura","termid":"MONDO:0002610"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"hyperglobulinemic purpura","secondary_identifiers":["DOID:3325","SCTID:402852007","UMLS:C0034151","MEDGEN:19585"],"termid":"MONDO:0006792","xrefs":{"Monarch":{"xref_id":"0006792"}}}


id: GO:0002785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antimicrobial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of production of molecular mediator of immune response","termid":"GO:0002701"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial humoral response","termid":"GO:0008348"},{"relation_name":"negatively_regulates","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antimicrobial peptide production","synonyms":[{"name":"down regulation of antimicrobial peptide production","type":"exact"},{"name":"down-regulation of antimicrobial peptide production","type":"exact"},{"name":"downregulation of antimicrobial peptide production","type":"exact"},{"name":"inhibition of antimicrobial peptide production","type":"narrow"}],"termid":"GO:0002785"}


id: MONDO:0003957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pineoblastoma occurring in adults.","definition_xrefs":["NCIT:C8292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult pineal parenchymal tumor","termid":"MONDO:0003248"},{"relation_name":"is_a","term_name":"pineoblastoma","termid":"MONDO:0016722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult pineoblastoma","secondary_identifiers":["UMLS:C0281332","MEDGEN:83794","DOID:6648"],"synonyms":[{"name":"adult pineoblastoma","type":"exact"},{"name":"pineoblastoma","type":"broad"},{"name":"pineoblastoma of adults","type":"exact"}],"termid":"MONDO:0003957","xrefs":{"Monarch":{"xref_id":"0003957"}}}


id: MONDO:0800348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 53","secondary_identifiers":["UMLS:C3150208","MEDGEN:461558"],"synonyms":[{"name":"RP53","type":"exact"}],"termid":"MONDO:0800348","xrefs":{"Monarch":{"xref_id":"0800348"}}}


id: GO:0098788
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The terminal swelling of an apical dendrite of a ciliated olfactory receptor neuron. Each knob gives rise to 5 to 20 long delicate nonmotile cilia, which extend into the mucus covering the sensory epithelium.","definition_xrefs":["PMID:20801626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic knob","synonyms":[{"name":"apical dendritic knob","type":"exact"}],"termid":"GO:0098788"}


id: MONDO:0037742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of mesenchymal gynecologic neoplasms. It includes endometrial stromal nodule, endometrioid stromal sarcoma, and undifferentiated sarcoma. Endometrial stromal nodule has been described in the uterine corpus only. Histologically, it is characterized by the lack of infiltration of the surrounding tissues. Endometrioid stromal sarcoma affects the uterine corpus, and rarely, the ovaries, cervix, and vagina. In the uterine corpus it is classified as low grade or high grade endometrial stromal sarcoma. In the remainder of the anatomic sites it is classified as low grade endometrioid stromal sarcoma. Undifferentiated sarcoma was previously also known as high grade endometrial stromal sarcoma. In 2014, high grade endometrial stromal sarcoma was reclassified and is currently considered a distinct and rare neoplasm that affects the uterine corpus only. It appears to have a prognosis that falls between low grade endometrial stromal sarcoma and undifferentiated sarcoma. The latter affects the uterine corpus and rarely the remainder of the anatomic sites.","definition_xrefs":["NCIT:C8384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrioid stromal and related neoplasms","secondary_identifiers":["UMLS:C4287868","MEDGEN:925400"],"synonyms":[{"name":"endometrioid stromal and related neoplasms","type":"exact"},{"name":"endometrioid stromal and related tumors","type":"exact"},{"name":"endometrioid stromal and related tumours","type":"exact"}],"termid":"MONDO:0037742","xrefs":{"Monarch":{"xref_id":"0037742"}}}


id: PBO:0065526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched domain containing 1","termid":"PBO:0065526"}


id: GO:0036226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the mitotic cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of deprivation of glucose.","definition_xrefs":["GOC:mah","PMID:958201","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cell cycle arrest in response to glucose starvation (obsolete GO:0036226)","synonyms":[{"name":"cell cycle arrest in response to glucose starvation","type":"broad"}],"termid":"GO:0036226"}


id: PBO:0064446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POC5 centriolar protein","termid":"PBO:0064446"}


id: GO:0043652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the apoptotic cell by phagocytosis, by a neighboring cell or by a phagocyte.","definition_xrefs":["PMID:15536015","GOC:rk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytosis, engulfment","termid":"GO:0006911"},{"relation_name":"part_of","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"engulfment of apoptotic cell","synonyms":[{"name":"engulfment of apoptotic cell corpse","type":"exact"},{"name":"engulfment of cell corpse","type":"exact"}],"termid":"GO:0043652"}


id: MONDO:0016209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign nocturnal alternating hemiplegia of childhood is a rare neurologic disease characterized by recurrent attacks of nocturnal screaming or crying followed or accompanied by unilateral or sometimes bilateral hemiplegia. Disorder is not associated with neurological or developmental impairments but may be associated with mild behavioral abnormalities.","definition_xrefs":["Orphanet:209973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alternating hemiplegia","termid":"MONDO:0016210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"benign familial nocturnal alternating hemiplegia of childhood","secondary_identifiers":["MEDGEN:1668716","icd11.foundation:447920235","UMLS:C4749822","GARD:20445"],"synonyms":[{"name":"benign familial nocturnal alternating hemiplegia in childhood","type":"exact"},{"name":"benign nocturnal alternating hemiplegia of childhood","type":"related"}],"termid":"MONDO:0016209","xrefs":{"Monarch":{"xref_id":"0016209"}}}


id: GO:0034731
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SMN-Sm protein complex formed by the association of the methylated Sm proteins B/B', D3, E, F, and G, and Lsm10 and Lsm11, with the SMN complex. This complex forms Sm cores on U7 snRNA.","definition_xrefs":["PMID:12975319","PMID:17401408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMN-Sm protein complex","termid":"GO:0034719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Lsm-containing SMN-Sm protein complex","synonyms":[{"name":"SMN-containing protein complex","type":"broad"}],"termid":"GO:0034731"}


id: MONDO:0060702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, di rocco type","secondary_identifiers":["OMIM:617974","UMLS:C4693799","MEDGEN:1646454"],"synonyms":[{"name":"SEMDDR","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Di Rocco type","type":"related"}],"termid":"MONDO:0060702","xrefs":{"Monarch":{"xref_id":"0060702"}}}


id: GO:0050416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formimidoyl-L-glutamate + H2O = N-formyl-L-glutamate + NH3.","definition_xrefs":["MetaCyc:FORMIMINOGLUTAMATE-DEIMINASE-RXN","EC:3.5.3.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"formimidoylglutamate deiminase activity","secondary_identifiers":["RHEA:22832"],"synonyms":[{"name":"N-formimidoyl-L-glutamate iminohydrolase activity","type":"related"},{"name":"formiminoglutamate deiminase activity","type":"exact"},{"name":"formiminoglutamic iminohydrolase activity","type":"related"}],"termid":"GO:0050416"}


id: PBO:0058650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6779","termid":"PBO:0058650"}


id: PR:P79065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tip1 gene.","definition_xrefs":["UniProtKB:P79065","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tip elongation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.12","synonyms":[{"name":"Spom972h-tip1","type":"exact"},{"name":"protein noc1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79065"}


id: MONDO:0013306
data:
  {"annotated_genes":["SJAG_00308"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87038],"is_not":false,"summary":null,"term":"MONDO:0013306"}]},"cv_name":"mondo","definition":"Combined oxidative phosphorylation defect type 7 is a rare mitochondrial disease due to a defect in mitochondrial protein synthesis characterized by a variable phenotype that includes onset in infancy or early childhood of failure to thrive and psychomotor regression (after initial normal development), as well as ocular manifestations (such as ptosis, nystagmus, optic atrophy, ophthalmoplegia and reduced vision). Additional manifestations include bulbar paresis with facial weakness, hypotonia, difficulty chewing, dysphagia, mild dysarthria, ataxia, global muscle atrophy, and areflexia. It has a relatively slow disease progression with patients often living into the third decade of life.","definition_xrefs":["Orphanet:254930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00308":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17234","OMIM:613559","DOID:0111487","SCTID:763204003","UMLS:C3150801","MEDGEN:462151"],"synonyms":[{"name":"C12ORF65 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"C12orf65 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"COXPD7","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 7","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in C12ORF65","type":"exact"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in C12orf65","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 7","type":"exact"},{"name":"severe C12ORF65-related COXPD","type":"exact"},{"name":"severe C12ORF65-related combined oxidative phosphorylation defect","type":"exact"}],"termid":"MONDO:0013306","terms_by_termid":{"MONDO:0013306":null},"xrefs":{"Monarch":{"xref_id":"0013306"}}}


id: MONDO:0018019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"5 ug/dL) is reported to lead to irreversible effects such as loss of cognition, shortening of attention span, alteration of behavior, dyslexia, attention deficit disorder, hypertension, renal impairment, immunotoxicity and toxicity to the reproductive organs.","definition_xrefs":["Orphanet:330015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lead poisoning","secondary_identifiers":["ICD9:984.8","MESH:D007855","ICD9:984.9","GARD:21503","SCTID:38342005"],"synonyms":[{"name":"Lead intoxication","type":"exact"},{"name":"plumbism","type":"exact"},{"name":"saturnism","type":"exact"}],"termid":"MONDO:0018019","xrefs":{"Monarch":{"xref_id":"0018019"}}}


id: MONDO:0002841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eosinophilic gastroenteritis (obsolete MONDO:0002841)","termid":"MONDO:0002841","xrefs":{"Monarch":{"xref_id":"0002841"}}}


id: PBO:0075121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 170","termid":"PBO:0075121"}


id: MONDO:0019491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare intellectual disability.","gene_count":0,"genotype_count":0,"name":"obsolete rare intellectual disability (obsolete MONDO:0019491)","secondary_identifiers":["Orphanet:87277"],"synonyms":[{"name":"rare intellectual disability","type":"exact"}],"termid":"MONDO:0019491","xrefs":{"Monarch":{"xref_id":"0019491"}}}


id: PR:O14460
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04354","PANTHER:PTHR23115:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.01c","secondary_identifiers":["UniProtKB:O14460"],"synonyms":[{"name":"EF-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EEF2","type":"exact"}],"termid":"PR:O14460"}


id: PBO:0063398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 10","termid":"PBO:0063398"}


id: PBO:0058695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6823","termid":"PBO:0058695"}


id: GO:0033566
data:
  {"annotated_genes":["SJAG_01756"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990735"}]},"cv_name":"biological_process","definition":"Any process in which a gamma-tubulin complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gamma-tubulin complex localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of gamma-tubulin complex localization","type":"exact"},{"name":"gamma-tubulin complex localisation","type":"exact"}],"termid":"GO:0033566","terms_by_termid":{"GO:1990735":null}}


id: PBO:0046247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 3","termid":"PBO:0046247"}


id: MONDO:0800215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multicentric Castleman disease, susceptibility to","secondary_identifiers":["UMLS:C3541461","MEDGEN:762089"],"synonyms":[{"name":"MCD","type":"exact"}],"termid":"MONDO:0800215","xrefs":{"Monarch":{"xref_id":"0800215"}}}


id: PBO:0083556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene HUL4/YJR036C; deletion mutant has decreased spore survival in Drosophila feces","termid":"PBO:0083556"}


id: MONDO:0014593
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85056],"is_not":false,"summary":null,"term":"MONDO:0014593"}]},"cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the AARS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 29","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616339","UMLS:C4225361","MEDGEN:908570","DOID:0080451","GARD:16092"],"synonyms":[{"name":"AARS early infantile epileptic encephalopathy","type":"exact"},{"name":"DEE29","type":"exact"},{"name":"EIEE29","type":"exact"},{"name":"developmental and epileptic encephalopathy 29","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in AARS","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 29","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 29","type":"exact"}],"termid":"MONDO:0014593","terms_by_termid":{"MONDO:0014593":null},"xrefs":{"Monarch":{"xref_id":"0014593"}}}


id: FYPO:0005118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a lower extent than normal when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription","termid":"FYPO:0002876"},{"relation_name":"is_a","term_name":"decreased gene expression during nitrogen starvation","termid":"FYPO:0006550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased transcription during nitrogen starvation","synonyms":[{"name":"decreased transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased transcription during nitrogen depletion","type":"exact"},{"name":"decreased transcription during nitrogen deprivation","type":"exact"},{"name":"decreased transcription during nitrogen limitation","type":"exact"},{"name":"decreased transcription in response to nitrogen starvation","type":"exact"},{"name":"decreased transcriptional response to nitrogen starvation","type":"exact"},{"name":"reduced transcription during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005118"}


id: MONDO:0000759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrorenal syndrome (obsolete MONDO:0000759)","termid":"MONDO:0000759","xrefs":{"Monarch":{"xref_id":"0000759"}}}


id: PBO:0086090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase; similar to prokaryotic phosphotransfer enzymes; null mutant shows alterations in glucose metabolism; GFP-fusion protein localizes to the cytoplasm and nucleus; YNL108C has a paralog, TFC7, that arose from the whole genome duplication","termid":"PBO:0086090"}


id: PBO:0086159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for proteasome assembly during quiescence; binds to base of the proteasome regulartory particle; required for survival at high temperature during stationary phase; not required for growth on nonfermentable carbon sources","termid":"PBO:0086159"}


id: PBO:0073157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit beta","termid":"PBO:0073157"}


id: _global:indirectly_positively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p indirectly positively regulates q iff p is indirectly causally upstream of q and p positively regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"indirectly_regulates","termid":"_global:indirectly_regulates"},{"relation_name":"is_a","term_name":"positively_regulates","termid":"_global:positively_regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indirectly_positively_regulates","secondary_identifiers":["RO:0002407"],"termid":"_global:indirectly_positively_regulates"}


id: FYPO:0001431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of the antibiotic Dio-9 than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to Dio-9","synonyms":[{"name":"resistance to DIO 9","type":"exact"},{"name":"resistance to Dio-9 during mitotic cell cycle","type":"related"},{"name":"resistance to Dio-9 during vegetative growth","type":"exact"},{"name":"resistant to Dio-9","type":"exact"}],"termid":"FYPO:0001431"}


id: MONDO:0011302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 10q25.","definition_xrefs":["DOID:0110754","PMID:9788970","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 17","secondary_identifiers":["MESH:C566395","OMIM:603266","UMLS:C1864068","MEDGEN:351036"],"synonyms":[{"name":"IDDM17","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 17","type":"related"},{"name":"insulin-dependent diabetes mellitus 17","type":"exact"}],"termid":"MONDO:0011302","xrefs":{"Monarch":{"xref_id":"0011302"}}}


id: GO:0017199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal threonine of proteins to form the derivative N-acetyl-L-threonine; catalyzed by peptide alpha-N-acetyltransferase.","definition_xrefs":["RESID:AA0052"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-threonine acetylation (obsolete GO:0017199)","termid":"GO:0017199"}


id: PBO:0062485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 1 pseudogene","termid":"PBO:0062485"}


id: MONDO:0014116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any complex cortical dysplasia with other brain malformations in which the cause of the disease is a mutation in the KIF5C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex cortical dysplasia with other brain malformations 2","secondary_identifiers":["OMIM:615282","DOID:0090133","MEDGEN:815343","UMLS:C3809013"],"synonyms":[{"name":"CDCBM2","type":"exact"},{"name":"KIF5C complex cortical dysplasia with other brain malformations","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations caused by mutation in KIF5C","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations type 2","type":"exact"},{"name":"cortical dysplasia, Complex, with Other brain malformations type 2","type":"exact"},{"name":"cortical dysplasia, complex, with other brain malformations 2","type":"related"}],"termid":"MONDO:0014116","xrefs":{"Monarch":{"xref_id":"0014116"}}}


id: GO:0070171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of tooth mineralization, the deposition of calcium salts in tooth structures.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biomineral tissue development","termid":"GO:0070168"},{"relation_name":"is_a","term_name":"regulation of tooth mineralization","termid":"GO:0070170"},{"relation_name":"negatively_regulates","term_name":"tooth mineralization","termid":"GO:0034505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tooth mineralization","termid":"GO:0070171"}


id: PBO:0048970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain and ankyrin repeats 1","termid":"PBO:0048970"}


id: FYPO:0005327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of cyclobutane pyrimidine dimers by error-free translesion synthesis does not occur.","definition_xrefs":["PomBase:mah","PMID:20453833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-free translesion synthesis","termid":"FYPO:0005323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0000298","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers","synonyms":[{"name":"abolished error-free translesion synthesis across TT-CPD","type":"exact"},{"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers during mitotic cell cycle","type":"related"},{"name":"abolished error-free translesion synthesis of cyclobutane pyrimidine dimers during vegetative growth","type":"exact"},{"name":"error-free translesion synthesis of cyclobutane pyrimidine dimers abolished","type":"related"}],"termid":"FYPO:0005327"}


id: GO:0042608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a T cell receptor, the antigen-recognizing receptor on the surface of T cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"T cell receptor binding","synonyms":[{"name":"T lymphocyte receptor binding","type":"exact"},{"name":"T-cell receptor binding","type":"exact"},{"name":"T-lymphocyte receptor binding","type":"exact"},{"name":"TCR binding","type":"exact"}],"termid":"GO:0042608"}


id: PBO:0070658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 29","termid":"PBO:0070658"}


id: PBO:0076166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 2","termid":"PBO:0076166"}


id: PBO:0034786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER phosphatidate cytidylyltransferase","termid":"PBO:0034786"}


id: PBO:0070466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 1","termid":"PBO:0070466"}


id: GO:1904787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asymmetric protein localization involved in cell fate determination.","definition_xrefs":["PMID:17476329","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of asymmetric protein localization involved in cell fate determination","termid":"GO:1904785"},{"relation_name":"positively_regulates","term_name":"asymmetric protein localization involved in cell fate determination","termid":"GO:0045167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of asymmetric protein localization involved in cell fate determination","synonyms":[{"name":"activation of asymmetric protein localisation involved in cell fate determination","type":"narrow"},{"name":"activation of asymmetric protein localization involved in cell fate commitment","type":"narrow"},{"name":"activation of asymmetric protein localization involved in cell fate determination","type":"narrow"},{"name":"activation of asymmetric protein localization resulting in cell fate commitment","type":"narrow"},{"name":"activation of cell fate commitment, asymmetric protein localization","type":"narrow"},{"name":"positive regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"positive regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"positive regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"positive regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"up regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"up regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"up regulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"up regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"up regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"up-regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"up-regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"up-regulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"up-regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"up-regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"upregulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"upregulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"upregulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"upregulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"upregulation of cell fate commitment, asymmetric protein localization","type":"exact"}],"termid":"GO:1904787"}


id: GO:0140042
data:
  {"annotated_genes":["SJAG_03609","SJAG_01180","SJAG_02980","SJAG_01537","SJAG_04049","SJAG_04059","SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62254,88557,94443,110780,111854,113975,118674],"is_not":false,"summary":null,"term":"GO:0140042"}]},"cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts of a lipid droplet.","definition_xrefs":["PMID:28011631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid droplet organization","termid":"GO:0034389"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"},{"relation_name":"part_of","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_01537":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"lipid droplet formation","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"adiposome formation","type":"exact"},{"name":"lipid body formation","type":"exact"},{"name":"lipid particle formation","type":"exact"}],"termid":"GO:0140042","terms_by_termid":{"GO:0140042":null}}


id: PBO:0058330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4704","termid":"PBO:0058330"}


id: MONDO:1010512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in pigs in which the cause of the disease is a mutation in the SGCD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, pig","termid":"MONDO:1010460"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, SGCD-related, pig","secondary_identifiers":["OMIA:002211-9823"],"termid":"MONDO:1010512","xrefs":{"Monarch":{"xref_id":"1010512"}}}


id: GO:1901586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of acid-sensing ion channel activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of acid-sensing ion channel activity (obsolete GO:1901586)","synonyms":[{"name":"down regulation of ASIC activity","type":"exact"},{"name":"down regulation of acid-sensing ion channel activity","type":"exact"},{"name":"down-regulation of ASIC activity","type":"exact"},{"name":"down-regulation of acid-sensing ion channel activity","type":"exact"},{"name":"downregulation of ASIC activity","type":"exact"},{"name":"downregulation of acid-sensing ion channel activity","type":"exact"},{"name":"inhibition of ASIC activity","type":"exact"},{"name":"inhibition of acid-sensing ion channel activity","type":"narrow"},{"name":"negative regulation of ASIC activity","type":"exact"}],"termid":"GO:1901586"}


id: PBO:0043332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal liver metastasis associated transcript 3","termid":"PBO:0043332"}


id: MONDO:0014319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any renal agenesis in which the cause of the disease is a mutation in the FGF20 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal agenesis","termid":"MONDO:0018470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal hypodysplasia/aplasia 2","secondary_identifiers":["UMLS:C3810359","MEDGEN:816689","OMIM:615721"],"synonyms":[{"name":"FGF20 renal agenesis (disease)","type":"exact"},{"name":"RHDA2","type":"related"},{"name":"renal agenesis (disease) caused by mutation in FGF20","type":"exact"},{"name":"renal hypodysplasia/aplasia 2","type":"exact"},{"name":"renal hypodysplasia/aplasia type 2","type":"exact"}],"termid":"MONDO:0014319","xrefs":{"Monarch":{"xref_id":"0014319"}}}


id: PATO:0000609
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's affording not completed blocked passage or view.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"open","termid":"PATO:0000610"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"closure incomplete","termid":"PATO:0000609"}


id: GO:0080090
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id: MONDO:0003398
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id: GO:1902889
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id: MONDO:1040016
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id: MONDO:0004885
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic choroid disorder","termid":"MONDO:0001898"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"choroidal sclerosis","secondary_identifiers":["UMLS:C0344297","MESH:C535358","ICD9:363.40","MEDGEN:137998","ICD9:363.4","DOID:980","SCTID:406446000"],"synonyms":[{"name":"choroidal degenerations","type":"exact"},{"name":"neurodegenerative disease of optic choroid","type":"exact"},{"name":"optic choroid neurodegenerative disease","type":"exact"}],"termid":"MONDO:0004885","xrefs":{"Monarch":{"xref_id":"0004885"}}}


id: GO:0031526
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding the brush border.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"brush border","termid":"GO:0005903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"brush border membrane","termid":"GO:0031526"}


id: GO:0045567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 2.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of TRAIL receptor 2 biosynthetic process (obsolete GO:0045567)","synonyms":[{"name":"down regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"down-regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"downregulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"inhibition of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"negative regulation of TRAIL receptor 2 anabolism","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 biosynthesis","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 formation","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 synthesis","type":"exact"}],"termid":"GO:0045567"}


id: PBO:0058660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6788","termid":"PBO:0058660"}


id: PBO:0088023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP protein involved in splicing; interacts with the branchpoint-binding protein during the formation of the second commitment complex","termid":"PBO:0088023"}


id: PBO:0047094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member F","termid":"PBO:0047094"}


id: PBO:0087458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a heterodimeric guanine nucleotide exchange factor (GEF); subunit of the Mon1-Ccz1 GEF complex, which stimulates nucleotide exchange and activation of Ypt7p, a Rab family GTPase involved in membrane tethering and fusion events at the late endosome and vacuole; GEF activity is stimulated by membrane association and anionic phospholipids; involved in localizing Ypt7p to the vacuolar membrane; required for macroautophagy, the CVT pathway and mitophagy","termid":"PBO:0087458"}


id: PBO:0091557
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the sequence previously referred to as SPAC27D7.10c was a duplication caused by misassembly of the cosmid","termid":"PBO:0091557"}


id: PR:O74741
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized protein YgiD that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02730","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4,5-DOPA dioxygenase extradiol-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.16c","secondary_identifiers":["UniProtKB:O74741"],"synonyms":[{"name":"Spom972h-ygiD","type":"exact"}],"termid":"PR:O74741"}


id: GO:0000421
data:
  {"annotated_genes":["SJAG_06309","SJAG_02414"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70211,71872],"is_not":false,"summary":null,"term":"GO:0000421"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an autophagosome, a double-membrane-bounded vesicle in which endogenous cellular material is sequestered.","definition_xrefs":["GOC:autophagy","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar membrane","termid":"GO:0005774"},{"relation_name":"part_of","term_name":"autophagosome","termid":"GO:0005776"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02414":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"autophagosome membrane","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"autophagic vacuole membrane","type":"exact"}],"termid":"GO:0000421","terms_by_termid":{"GO:0000421":null}}


id: PBO:0082100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8-oxo-dGTP diphosphatase of the Nudix hydrolase family; converts diphosphates of damaged forms of thiamin to monophosphates; GST fusion protein is a Dbf2p-Mob1p phosphorylation target in a proteome chip analysis; synthetic lethal with PH085 deletion; plays a role in restricting Ty1 transposition","termid":"PBO:0082100"}


id: GO:0180019
data:
  {"annotated_genes":["SJAG_03327","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101131,113567],"is_not":false,"summary":null,"term":"GO:0180019"}]},"cv_name":"cellular_component","definition":"A kinetochore subcomplex that binds to centromeric chromatin and forms part of the outer kinetochore. It helps to recruit outer kinetochore subunits that will bind to microtubules. In humans and yeast respectively, it consists of KNL1/Spc105p and ZWINT/Kre28p.","definition_xrefs":["PMID:27881301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03327":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0000776","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Knl1/Spc105 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180019","terms_by_termid":{"GO:0180019":null}}


id: MONDO:0024663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant dermis tumor","termid":"MONDO:0003363"},{"relation_name":"is_a","term_name":"skin meningioma","termid":"MONDO:0004429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"primary skin meningioma","secondary_identifiers":["NCIT:C5277","UMLS:C1335481","MEDGEN:235494"],"synonyms":[{"name":"primary cutaneous meningioma","type":"exact"},{"name":"primary meningioma of skin","type":"exact"},{"name":"primary meningioma of the skin","type":"exact"},{"name":"primary skin meningioma","type":"exact"}],"termid":"MONDO:0024663","xrefs":{"Monarch":{"xref_id":"0024663"}}}


id: MOD:00028
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-tyrosine.","definition_xrefs":["PubMed:5550972","PubMed:2542938","DeltaMass:0","PubMed:6120171","PubMed:6061414","ChEBI:29975","PubMed:6692818","PubMed:2190093","RESID:AA0019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tyrosine residue","synonyms":[{"name":"(2S)-2-amino-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"2-azanyl-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"L-tyrosine","type":"exact"},{"name":"Tyr","type":"exact"},{"name":"alpha-amino-beta-(para-hydroxyphenyl)propionic acid","type":"exact"},{"name":"p-tyrosine","type":"exact"},{"name":"para-hydroxyphenylalanine","type":"exact"}],"termid":"MOD:00028"}


id: MONDO:0002826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tuberculosis (obsolete MONDO:0002826)","termid":"MONDO:0002826","xrefs":{"Monarch":{"xref_id":"0002826"}}}


id: PBO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp10 (predicted)","termid":"PBO:0000331"}


id: FYPO:0005972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of proton export is decreased during a cellular response to glucose stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased proton export during cellular response to glucose stimulus","synonyms":[{"name":"decreased H+ ion export during cellular response to glucose stimulus","type":"related"},{"name":"decreased hydrogen ion export during cellular response to glucose stimulus","type":"exact"},{"name":"decreased proton export across plasma membrane during cellular response to glucose stimulus","type":"exact"},{"name":"decreased proton export during cellular response to glucose stimulus during mitotic cell cycle","type":"related"},{"name":"decreased proton export from cell during cellular response to glucose stimulus","type":"exact"},{"name":"reduced proton export during cellular response to glucose stimulus","type":"exact"}],"termid":"FYPO:0005972"}


id: MONDO:1011850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotising myelopathy, non-human animal","secondary_identifiers":["OMIA:000706"],"termid":"MONDO:1011850","xrefs":{"Monarch":{"xref_id":"1011850"}}}


id: PBO:0004749
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome DISjunction","termid":"PBO:0004749"}


id: PBO:0108541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 6, pseudogene","termid":"PBO:0108541"}


id: PBO:0048577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 1","termid":"PBO:0048577"}


id: GO:0051033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of RNA, ribonucleic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid transmembrane transporter activity","termid":"GO:0051032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"RNA transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-203906"],"termid":"GO:0051033"}


id: MONDO:1010781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alopecia areata that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia areata, non-human animal","termid":"MONDO:1010140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia areata, pig","secondary_identifiers":["OMIA:001702-9823"],"termid":"MONDO:1010781","xrefs":{"Monarch":{"xref_id":"1010781"}}}


id: GO:0030076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-pigment complex that may be closely or peripherally associated to photosynthetic reaction centers that participate in harvesting and transferring radiant energy to the reaction center.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"light-harvesting complex","secondary_identifiers":["Wikipedia:Light-harvesting_complex"],"synonyms":[{"name":"antenna complex","type":"related"}],"termid":"GO:0030076"}


id: MONDO:0004995
data:
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id: GO:0060261
data:
  {"annotated_genes":["SJAG_04647","SJAG_00297","SJAG_00904","SJAG_03421","SJAG_02494","SJAG_02849","SJAG_04099","SJAG_04705","SJAG_02391","SJAG_03573","SJAG_03622","SJAG_00766","SJAG_01952","SJAG_01403","SJAG_00150","SJAG_02551","SJAG_04820","SJAG_00342","SJAG_03590","SJAG_05203","SJAG_00909","SJAG_01771","SJAG_05341"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87243,90157,90473,94133,94243,95173,95655,98476,98828,101753,103209,103468,105497,105846,106037,106170,108519,108546,114524,115089,118727],"is_not":false,"summary":null,"term":"GO:0060261"},{"annotations":[79260,89496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription initiation","termid":"GO:2000144"},{"relation_name":"positively_regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"positive regulation of transcription initiation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060261","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: GO:0060041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates.","definition_xrefs":["ISBN:0815340729","GOC:dph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina development in camera-type eye","secondary_identifiers":["GO:0002073"],"synonyms":[{"name":"retina development in camera-style eye","type":"exact"},{"name":"retinal development","type":"related"}],"termid":"GO:0060041"}


id: SO:0000113
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A viral sequence which has integrated into a host genome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proviral_region","synonyms":[{"name":"proviral region","type":"exact"},{"name":"proviral sequence","type":"related"}],"termid":"SO:0000113"}


id: GO:1902425
data:
  {"annotated_genes":["SJAG_00082","SJAG_03048","SJAG_01805","SJAG_05290","SJAG_04280","SJAG_04140","SJAG_01837","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104981,111753,115802],"is_not":false,"summary":null,"term":"GO:1902425"},{"annotations":[89789,102177,93602,110996,116470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation.","definition_xrefs":["PMID:22065639","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051987"},{"relation_name":"is_a","term_name":"regulation of attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1902423"},{"relation_name":"positively_regulates","term_name":"attachment of mitotic spindle microtubules to kinetochore","termid":"GO:0051315"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"positive regulation of attachment of mitotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"activation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"narrow"},{"name":"activation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"narrow"},{"name":"activation of attachment of spindle microtubules to mitotic chromosome","type":"narrow"},{"name":"activation of mitotic bipolar attachment","type":"related"},{"name":"positive regulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"positive regulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"positive regulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"positive regulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"positive regulation of mitotic bipolar attachment","type":"related"},{"name":"up regulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"up regulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"up regulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"up regulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"up regulation of mitotic bipolar attachment","type":"related"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"up-regulation of mitotic bipolar attachment","type":"related"},{"name":"upregulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"upregulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"upregulation of mitotic bipolar attachment","type":"related"}],"termid":"GO:1902425","terms_by_termid":{"GO:0140429":null,"GO:1902425":null}}


id: GO:0007261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a dimer of two STAT proteins (Signal Transducers and Activators of Transcription) following their activation by members of the janus activated kinase (JAK) family of tyrosine kinases.","definition_xrefs":["GOC:jl","PMID:12039028"],"gene_count":0,"genotype_count":0,"name":"obsolete JAK-induced STAT protein dimerization (obsolete GO:0007261)","synonyms":[{"name":"JAK-induced STAT protein dimerization","type":"exact"}],"termid":"GO:0007261"}


id: PBO:0051607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 31 receptor A","termid":"PBO:0051607"}


id: SO:0000900
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a pseudogene where by an mRNA was retrotransposed. The mRNA sequence is transcribed back into the genome, lacking introns and promotors, but often including a polyA tail.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000900 processed (obsolete SO:0000900)","termid":"SO:0000900"}


id: PBO:0056294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1A","termid":"PBO:0056294"}


id: PBO:0080687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIZ pseudogene 1","termid":"PBO:0080687"}


id: GO:0022878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sucrose(out) = protein histidine + sucrose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose transmembrane transporter activity","termid":"GO:0008515"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0003824","GO:0016740","GO:0022857"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sucrose phosphotransferase system transporter activity","secondary_identifiers":["MetaCyc:SUCROSEPHOSPHO-RXN","RHEA:49236"],"synonyms":[{"name":"sucrose PTS transporter activity","type":"exact"}],"termid":"GO:0022878"}


id: FYPO:0000340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a single functional copy of a gene does not provide sufficient normal function in a diploid cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"haploinsufficient","synonyms":[{"name":"haploinsufficient during mitotic cell cycle","type":"related"},{"name":"haploinsufficient during vegetative growth","type":"exact"}],"termid":"FYPO:0000340"}


id: FYPO:0001279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to oxidative stress is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased RNA level during cellular response to oxidative stress","synonyms":[{"name":"increased RNA accumulation during cellular response to oxidative stress","type":"related"},{"name":"increased RNA level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"increased RNA level during oxidative stress response","type":"exact"},{"name":"increased mRNA level during cellular response to oxidative stress","type":"narrow"},{"name":"increased transcript level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0001279"}


id: SO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which the T3 RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Phage_RNA_Polymerase_Promoter","termid":"SO:0001204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T3_RNA_Polymerase_Promoter","synonyms":[{"name":"T3 RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001206"}


id: MONDO:0800155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of amino acid metabolism that has its basis in the disruption of the metabolism of glycine and/or serine.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of serine family metabolism","termid":"MONDO:0019239"},{"relation_name":"is_a","term_name":"glycine metabolism disease","termid":"MONDO:0045020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of glycine and serine metabolism","termid":"MONDO:0800155","xrefs":{"Monarch":{"xref_id":"0800155"}}}


id: GO:0052638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-butyrate + UDP-D-glucose = indole-3-butyryl-beta-1-D-glucose + UDP.","definition_xrefs":["RHEA:62708","MetaCyc:RXN-11655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"indole-3-butyrate beta-glucosyltransferase activity","synonyms":[{"name":"IBA-Glc synthetase activity","type":"exact"},{"name":"IBA-glucose synthase activity","type":"exact"},{"name":"IBAGlu synthase activity","type":"exact"},{"name":"UDP-glucose:(indol-3-yl)butyrate beta-D-glucosyltransferase activity","type":"exact"},{"name":"UDP-glucose:indol-3-ylbutyrate glucosyl-transferase activity","type":"exact"},{"name":"UDP-glucose:indol-3-ylbutyrate glucosyltransferase activity","type":"exact"},{"name":"UDPG-indol-3-ylbutyryl glucosyl transferase activity","type":"exact"},{"name":"UDPglucose:indole-3-butyrate beta-D-glucosyltransferase activity","type":"exact"},{"name":"indol-3-ylbutyrylglucose synthase activity","type":"exact"},{"name":"indole-3-butyric acid glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-indolebutyrate glucosyltransferase activity","type":"exact"}],"termid":"GO:0052638"}


id: GO:1902233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of positive thymic T cell selection.","definition_xrefs":["PMID:22080863","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation in thymus","termid":"GO:0033085"},{"relation_name":"is_a","term_name":"regulation of positive thymic T cell selection","termid":"GO:1902232"},{"relation_name":"negatively_regulates","term_name":"positive thymic T cell selection","termid":"GO:0045059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of positive thymic T cell selection","synonyms":[{"name":"down regulation of positive thymic T cell selection","type":"exact"},{"name":"down regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"down regulation of positive thymic T-cell selection","type":"exact"},{"name":"down regulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"down-regulation of positive thymic T cell selection","type":"exact"},{"name":"down-regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"down-regulation of positive thymic T-cell selection","type":"exact"},{"name":"down-regulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"downregulation of positive thymic T cell selection","type":"exact"},{"name":"downregulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"downregulation of positive thymic T-cell selection","type":"exact"},{"name":"downregulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"inhibition of positive thymic T cell selection","type":"narrow"},{"name":"inhibition of positive thymic T lymphocyte selection","type":"narrow"},{"name":"inhibition of positive thymic T-cell selection","type":"narrow"},{"name":"inhibition of positive thymic T-lymphocyte selection","type":"narrow"},{"name":"negative regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"negative regulation of positive thymic T-cell selection","type":"exact"},{"name":"negative regulation of positive thymic T-lymphocyte selection","type":"exact"}],"termid":"GO:1902233"}


id: GO:0051968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"regulation of synaptic transmission, glutamatergic","termid":"GO:0051966"},{"relation_name":"positively_regulates","term_name":"synaptic transmission, glutamatergic","termid":"GO:0035249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of synaptic transmission, glutamatergic","synonyms":[{"name":"activation of synaptic transmission, glutamatergic","type":"narrow"},{"name":"stimulation of synaptic transmission, glutamatergic","type":"narrow"},{"name":"up regulation of synaptic transmission, glutamatergic","type":"exact"},{"name":"up-regulation of synaptic transmission, glutamatergic","type":"exact"},{"name":"upregulation of synaptic transmission, glutamatergic","type":"exact"}],"termid":"GO:0051968"}


id: PBO:0038894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor A1","termid":"PBO:0038894"}


id: SO:0001043
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attachment site located on a conjugative transposon and used for site-specific integration of a conjugative transposon.","definition_xrefs":["Phigo:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"conjugative_transposon","termid":"SO:0000371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attCtn_site","synonyms":[{"name":"attCtn site","type":"exact"}],"termid":"SO:0001043"}


id: PBO:0059440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A10","termid":"PBO:0059440"}


id: PBO:0041970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 13","termid":"PBO:0041970"}


id: MONDO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"strabismus","termid":"MONDO:0003432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conjugate gaze palsy","secondary_identifiers":["ICD9:378.81","MEDGEN:675273","SCTID:1534008","DOID:12445","UMLS:C0702143"],"synonyms":[{"name":"palsy of conjugate gaze","type":"exact"}],"termid":"MONDO:0001527","xrefs":{"Monarch":{"xref_id":"0001527"}}}


id: PBO:0077082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine kinase with immunoglobulin like and EGF like domains 1","termid":"PBO:0077082"}


id: PBO:0001046
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses genes involved in cell surface adhesion","termid":"PBO:0001046"}


id: GO:0102128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-dihydrocoumaroyl-CoA + 3 malonyl-CoA + 3 H+ = phloretin + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["PMID:20356611","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete chalcone synthase activity (obsolete GO:0102128)","termid":"GO:0102128"}


id: PBO:0039231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT interacting protein","termid":"PBO:0039231"}


id: GO:0044500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant decrease of the force with which blood travels through the circulatory system of the bitten/stung organism.","definition_xrefs":["PMID:19837656","GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of blood pressure in another organism","termid":"GO:0044498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of blood pressure in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of blood pressure in other organism","type":"exact"},{"name":"hypotensive activity in other organism","type":"exact"}],"termid":"GO:0044500"}


id: GO:0061131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a specific region of the gut is delineated into the area in which the pancreas will develop.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"pancreatic bud formation","termid":"GO:0061130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas field specification","termid":"GO:0061131"}


id: PBO:0090799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/ASTRA complex, phosphatidylinositol pseudokinase Tra1","termid":"PBO:0090799"}


id: PBO:0060251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL pseudogene 1","termid":"PBO:0060251"}


id: FYPO:0007046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which alkaline phosphatase activity is absent during a cellular response to zinc ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished alkaline phosphatase activity","termid":"FYPO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abolished alkaline phosphatase activity during cellular response to zinc ion starvation","synonyms":[{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion depletion","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion deprivation","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc ion limitation","type":"exact"},{"name":"abolished alkaline phosphatase activity during cellular response to zinc starvation","type":"exact"},{"name":"alkaline phosphatase activity abolished during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0007046"}


id: GO:0047717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + imidazol-4-ylacetate + NADH + O2 = 5-hydroxyimidazole-4-acetate + H2O + NAD+.","definition_xrefs":["EC:1.14.13.5","RHEA:19425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"imidazoleacetate 4-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04066","MetaCyc:IMIDAZOLEACETATE-4-MONOOXYGENASE-RXN"],"synonyms":[{"name":"4-imidazoleacetate,NADH:oxygen oxidoreductase (5-hydroxylating)","type":"related"},{"name":"imidazoleacetate hydroxylase activity","type":"related"},{"name":"imidazoleacetic hydroxylase activity","type":"exact"},{"name":"imidazoleacetic monooxygenase activity","type":"related"}],"termid":"GO:0047717"}


id: GO:0106041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of GABA-A receptor activity.","definition_xrefs":["PMID:24044036"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of GABA-A receptor activity (obsolete GO:0106041)","termid":"GO:0106041"}


id: MONDO:0012590
data:
  {"annotated_genes":["SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86300],"is_not":false,"summary":null,"term":"MONDO:0012590"}]},"cv_name":"mondo","definition":"A syndrome characterized by aged bird-like facies, lack of subcutaneous fat, dwarfism, cachexia and microcephaly. Additional features include sun-sensitivity from birth, learning disabilities, hearing loss, and visual impairment. It has material basis in homozygous mutation in the ERCC4 gene on chromosome 16p13.","definition_xrefs":["DOID:0060590","PMID:17183314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02556":null},"genotype_count":0,"is_obsolete":false,"name":"XFE progeroid syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:410064","NCIT:C173111","OMIM:610965","UMLS:C1970416","MESH:C567043"],"synonyms":[{"name":"XFE progeroid syndrome","type":"exact"},{"name":"XFEPS","type":"exact"},{"name":"XPF-ERCC1 progeroid syndrome","type":"exact"}],"termid":"MONDO:0012590","terms_by_termid":{"MONDO:0012590":null},"xrefs":{"Monarch":{"xref_id":"0012590"}}}


id: MONDO:0031045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, IIa 11","secondary_identifiers":["MEDGEN:1823978","OMIM:620019","UMLS:C5774205"],"synonyms":[{"name":"DA11","type":"exact"},{"name":"arthrogryposis, distal, IIa 11","type":"exact"}],"termid":"MONDO:0031045","xrefs":{"Monarch":{"xref_id":"0031045"}}}


id: FYPO:0003225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of microtubule polymerization, i.e. the addition of tubulin dimers to a microtubule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:23051734","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"},{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal rate of microtubule polymerization during vegetative growth","synonyms":[{"name":"normal microtubule polymerization rate","type":"exact"},{"name":"normal rate of microtubule growth","type":"related"},{"name":"normal rate of microtubule polymerisation","type":"exact"},{"name":"normal rate of microtubule polymerisation during vegetative growth","type":"exact"},{"name":"normal rate of microtubule polymerization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003225"}


id: PBO:0069204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 458, pseudogene","termid":"PBO:0069204"}


id: GO:1990034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:2145281","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"calcium ion export across plasma membrane","synonyms":[{"name":"calcium ion efflux from cell","type":"exact"},{"name":"calcium ion export from cell","type":"exact"}],"termid":"GO:1990034"}


id: PBO:0075093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 142","termid":"PBO:0075093"}


id: MONDO:0019562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized scleroderma is the skin localized form of scleroderma characterized by fibrosis of the skin causing cutaneous plaques or strips.","definition_xrefs":["Orphanet:90289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scleroderma","termid":"MONDO:0019340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"localized scleroderma","secondary_identifiers":["ICD9:701.0","MESH:D012594","MedDRA:10039712","GARD:7058","DOID:8472","icd11.foundation:1430740369","EFO:1001361","MEDGEN:48586","SCTID:201048007","NCIT:C72069","UMLS:C0036420"],"synonyms":[{"name":"Scleroderma, circumscribed or localised","type":"exact"},{"name":"Scleroderma, circumscribed or localized","type":"exact"},{"name":"Scleroderma, localised","type":"related"},{"name":"Scleroderma, localized","type":"related"},{"name":"circumscribed scleroderma","type":"exact"},{"name":"localised fibrosing scleroderma","type":"exact"},{"name":"localised morphea","type":"exact"},{"name":"localised morphoea","type":"exact"},{"name":"localised scleroderma (disorder) [ambiguous]","type":"exact"},{"name":"localized fibrosing scleroderma","type":"exact"},{"name":"localized morphea","type":"exact"},{"name":"localized morphoea","type":"exact"},{"name":"localized scleroderma","type":"exact"},{"name":"localized scleroderma (disorder) [ambiguous]","type":"exact"},{"name":"morphea","type":"exact"}],"termid":"MONDO:0019562","xrefs":{"Monarch":{"xref_id":"0019562"}}}


id: MOD:00859
data:
  {"annotated_genes":["SJAG_03524","SJAG_00827","SJAG_02902","SJAG_03632","SJAG_02980"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00793"},{"annotations":[80432,80489,80309,80263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:01154"}]},"cv_name":"PSI-MOD","definition":"A protein modification that can be derived from different natural residues by different chemical processes.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00827":null,"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null,"SJAG_03632":null},"genotype_count":0,"is_obsolete":false,"name":"modified residue that can arise from different natural residues","references_by_uniquename":{"PMID:36408920":null},"termid":"MOD:00859","terms_by_termid":{"MOD:00793":null,"MOD:01154":null}}


id: GO:0000247
data:
  {"annotated_genes":["SJAG_03598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92399],"is_not":false,"summary":null,"term":"GO:0000247"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: fecosterol = episterol.","definition_xrefs":["RHEA:33435","PMID:8988026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"C-8 sterol isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN3O-203"],"synonyms":[{"name":"delta-8-delta-7 sterol isomerase activity","type":"exact"}],"termid":"GO:0000247","terms_by_termid":{"GO:0000247":null}}


id: GO:0019199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: a protein + ATP = a phosphoprotein + ADP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"},{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0004672","GO:0003674","GO:0038023","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"transmembrane receptor protein kinase activity","secondary_identifiers":["Reactome:R-HSA-8983063","Reactome:R-HSA-8983059"],"termid":"GO:0019199"}


id: PBO:0045601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 12 (pseudogene)","termid":"PBO:0045601"}


id: GO:0051987
data:
  {"annotated_genes":["SJAG_04280","SJAG_01805","SJAG_03048","SJAG_05290","SJAG_04140","SJAG_01837","SJAG_03126","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104981,111753,115802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[93602,102177,110996,116470,89789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chromosome segregation","termid":"GO:0051984"},{"relation_name":"is_a","term_name":"regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051988"},{"relation_name":"positively_regulates","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of attachment of spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"stimulation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"up regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to kinetochore","type":"exact"}],"termid":"GO:0051987","terms_by_termid":{"GO:0140429":null,"GO:1902425":null}}


id: PBO:0071880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 18","termid":"PBO:0071880"}


id: GO:0106137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a IkappaB kinase complex.","definition_xrefs":["PMID:12492477","GOC:pga"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"IkappaB kinase complex binding","termid":"GO:0106137"}


id: MONDO:0021360
data:
  {"annotated_genes":["SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[85467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"},{"annotations":[85678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012004"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the parathyroid gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parathyroid gland disorder","termid":"MONDO:0001223"},{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01151":null},"genotype_count":0,"is_obsolete":false,"name":"tumor of parathyroid gland","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3313","ICD9:239.7","SCTID:127020005","UMLS:C0030521","MEDGEN:10586"],"synonyms":[{"name":"neoplasm of parathyroid","type":"exact"},{"name":"neoplasm of parathyroid gland","type":"exact"},{"name":"neoplasm of the parathyroid","type":"exact"},{"name":"neoplasm of the parathyroid gland","type":"exact"},{"name":"parathyroid gland neoplasm","type":"exact"},{"name":"parathyroid gland neoplasm (disease)","type":"exact"},{"name":"parathyroid gland tumor","type":"exact"},{"name":"parathyroid gland tumour","type":"exact"},{"name":"parathyroid neoplasm","type":"exact"},{"name":"parathyroid tumor","type":"exact"},{"name":"parathyroid tumour","type":"exact"},{"name":"tumor of parathyroid","type":"exact"},{"name":"tumor of parathyroid gland","type":"exact"},{"name":"tumor of the parathyroid","type":"exact"},{"name":"tumor of the parathyroid gland","type":"exact"},{"name":"tumour of parathyroid","type":"exact"},{"name":"tumour of the parathyroid","type":"exact"},{"name":"tumour of the parathyroid gland","type":"exact"}],"termid":"MONDO:0021360","terms_by_termid":{"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0012004":null},"xrefs":{"Monarch":{"xref_id":"0021360"}}}


id: MONDO:1012305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypocatalasia, non-human animal","termid":"MONDO:1011714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocatalasia, dog","secondary_identifiers":["OMIA:001138-9615"],"termid":"MONDO:1012305","xrefs":{"Monarch":{"xref_id":"1012305"}}}


id: PBO:0029183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_6-phosphate_level","termid":"PBO:0029183"}


id: MONDO:1011177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrosis that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis, non-human animal","termid":"MONDO:1010299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrosis, sheep","secondary_identifiers":["OMIA:000750-9940"],"termid":"MONDO:1011177","xrefs":{"Monarch":{"xref_id":"1011177"}}}


id: GO:0033086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of extrathymic T cell differentiation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrathymic T cell differentiation","termid":"GO:0033082"},{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"negatively_regulates","term_name":"extrathymic T cell differentiation","termid":"GO:0033078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of extrathymic T cell differentiation","synonyms":[{"name":"negative regulation of extrathymic T cell development","type":"related"}],"termid":"GO:0033086"}


id: PBO:0080268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 31 pseudogene","termid":"PBO:0080268"}


id: PBO:0114320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, ubiquitin conjugatiing enzyme-like","termid":"PBO:0114320"}


id: PBO:0074463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 5 (pseudogene)","termid":"PBO:0074463"}


id: MONDO:1012260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal dysraphism, non-human animal","termid":"MONDO:1011671"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysraphism, cattle","secondary_identifiers":["OMIA:000938-9913"],"termid":"MONDO:1012260","xrefs":{"Monarch":{"xref_id":"1012260"}}}


id: GO:1900177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aflatoxin biosynthetic process.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"aflatoxin biosynthetic process","termid":"GO:0045122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of aflatoxin biosynthetic process","synonyms":[{"name":"regulation of aflatoxin anabolism","type":"exact"},{"name":"regulation of aflatoxin biosynthesis","type":"exact"},{"name":"regulation of aflatoxin formation","type":"exact"},{"name":"regulation of aflatoxin synthesis","type":"exact"}],"termid":"GO:1900177"}


id: PBO:0089070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S6","termid":"PBO:0089070"}


id: GO:0042639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resting phase of hair cycle.","definition_xrefs":["PMID:12230507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cycle phase","termid":"GO:0044851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telogen","synonyms":[{"name":"hair resting phase","type":"narrow"}],"termid":"GO:0042639"}


id: MONDO:0017780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"20p13 microdeletion syndrome is a rare chromosomal anomaly characterized by developmental delay, mild to moderate intellectual disability, epilepsy, and unspecific dysmorphic signs. High palate, delayed permanent tooth eruption, hypoplastic fingernails, clinodactyly and short fingers have also been reported.","definition_xrefs":["Orphanet:313781"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial monosomy of the short arm of chromosome 20","termid":"MONDO:0016898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20p13 microdeletion syndrome","secondary_identifiers":["MEDGEN:1655817","GARD:21360","UMLS:C4750789"],"synonyms":[{"name":"20p subtelomeric deletion syndrome","type":"exact"},{"name":"Del(20)(p13)","type":"exact"},{"name":"monosomy 20p13","type":"exact"}],"termid":"MONDO:0017780","xrefs":{"Monarch":{"xref_id":"0017780"}}}


id: MONDO:0019258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild phenylketonuria is a rare form of phenylketouria (PKU), an inborn error of amino acid metabolism, characterized by symptoms of PKU of mild to moderate severity.","definition_xrefs":["Orphanet:79253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria","termid":"MONDO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"mild phenylketonuria","secondary_identifiers":["GARD:10324","MEDGEN:1842357","UMLS:C5680203"],"synonyms":[{"name":"mPKU","type":"exact"},{"name":"mild PKU","type":"exact"},{"name":"variant PKU","type":"exact"},{"name":"variant phenylketonuria","type":"exact"}],"termid":"MONDO:0019258","xrefs":{"Monarch":{"xref_id":"0019258"}}}


id: GO:0016697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor, cytochrome as acceptor","secondary_identifiers":["EC:1.12.2.-","GO:0016698"],"termid":"GO:0016697"}


id: GO:0140545
data:
  {"annotated_genes":["SJAG_04187","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89057,104007],"is_not":false,"summary":null,"term":"GO:0140545"}]},"cv_name":"molecular_function","definition":"An ATP-dependent molecular chaperone activity that mediates the solubilization of ordered protein aggregates.","definition_xrefs":["PMID:26312418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"},{"relation_name":"is_a","term_name":"protein-containing complex destabilizing activity","termid":"GO:0140776"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03345":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"ATP-dependent protein disaggregase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein disaggregase activity","type":"broad"},{"name":"protein unfoldase activity","type":"broad"}],"termid":"GO:0140545","terms_by_termid":{"GO:0140545":null}}


id: PBO:0089966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated phospholipid scramblase Atg9","termid":"PBO:0089966"}


id: PBO:0089595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone, FACT complex subunit Spt16","termid":"PBO:0089595"}


id: MONDO:0006500
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007154"}]},"cv_name":"mondo","definition":"A benign vascular lesion characterized by the formation of capillary-sized or cavernous vascular channels.","definition_xrefs":["NCIT:C3085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign blood vessel neoplasm","termid":"MONDO:0024286"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"hemangioma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1000635","ICD9:228.09","ICDO:9120/0","MESH:D006391","ONCOTREE:HEMA","SCTID:400210000","DOID:255","ICD9:228.00","MEDGEN:5477","UMLS:C0018916","ICD9:228.0","HP:0001028"],"synonyms":[{"name":"angioma","type":"related"},{"name":"benign angioma","type":"related"},{"name":"benign hemangioma","type":"exact"},{"name":"hemangioma","type":"exact"},{"name":"hemangioma, benign","type":"exact"}],"termid":"MONDO:0006500","terms_by_termid":{"MONDO:0007154":null},"xrefs":{"Monarch":{"xref_id":"0006500"}}}


id: GO:0035790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated a ligand binding to an alpha-type platelet-derived growth factor receptor (PDGFalpha) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:yaf","PMID:10372961","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"PDGFR-alpha signaling pathway","type":"related"},{"name":"alphaPDGF receptor signaling pathway","type":"exact"},{"name":"platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:0035790"}


id: MOD:00700
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a tetrapyrrole group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrapyrrole modified residue","synonyms":[{"name":"TetrapyrRes","type":"exact"}],"termid":"MOD:00700"}


id: MONDO:0005148
data:
  {"annotated_genes":["SJAG_04206","SJAG_00214","SJAG_02426","SJAG_02000","SJAG_00092","SJAG_04334","SJAG_02012","SJAG_04495","SJAG_04394","SJAG_02013"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84936,84937,84938,84939,84940,87066,87067,87068],"is_not":false,"summary":null,"term":"MONDO:0005148"},{"annotations":[87141,87140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014488"}]},"cv_name":"mondo","definition":"A type of diabetes mellitus that is characterized by insulin resistance or desensitization and increased blood glucose levels. This is a chronic disease that can develop gradually over the life of a patient and can be linked to both environmental factors and heredity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus","termid":"MONDO:0005015"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00092":null,"SJAG_00214":null,"SJAG_02000":null,"SJAG_02012":null,"SJAG_02013":null,"SJAG_02426":null,"SJAG_04206":null,"SJAG_04334":null,"SJAG_04394":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0005015"],"is_obsolete":false,"name":"type 2 diabetes mellitus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0011860","NCIT:C26747","SCTID:44054006","icd11.foundation:119724091","MESH:D003924","NANDO:2200461","OMIM:125853","DOID:9352","MEDGEN:41523"],"synonyms":[{"name":"NIDDM","type":"exact"},{"name":"T2D","type":"exact"},{"name":"T2DM","type":"exact"},{"name":"T2DM - type 2 diabetes mellitus","type":"exact"},{"name":"adult onset diabetes","type":"exact"},{"name":"adult-onset diabetes","type":"exact"},{"name":"diabetes mellitis type 2","type":"exact"},{"name":"diabetes mellitis type II","type":"exact"},{"name":"diabetes mellitus, non-insulin-dependent, susceptibility to","type":"related"},{"name":"diabetes mellitus, noninsulin-dependent","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, 2","type":"narrow"},{"name":"diabetes mellitus, noninsulin-dependent, association with","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, late onset","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, susceptibility to","type":"related"},{"name":"diabetes mellitus, type 2","type":"exact"},{"name":"diabetes mellitus, type 2, protection against","type":"related"},{"name":"diabetes mellitus, type 2, susceptibility to","type":"related"},{"name":"diabetes mellitus, type II","type":"exact"},{"name":"diabetes mellitus, type II, susceptibility to","type":"related"},{"name":"diabetes, type 2","type":"exact"},{"name":"hypertension, insulin resistance-related, susceptibility to","type":"related"},{"name":"insulin resistance, severe, digenic","type":"exact"},{"name":"insulin resistance, susceptibility to","type":"related"},{"name":"maturity-onset diabetes","type":"related"},{"name":"non-insulin dependent diabetes","type":"exact"},{"name":"non-insulin dependent diabetes mellitus","type":"exact"},{"name":"non-insulin-dependent diabetes mellitus","type":"exact"},{"name":"noninsulin dependent diabetes","type":"exact"},{"name":"noninsulin-dependent diabetes mellitus","type":"exact"},{"name":"type 2 diabetes","type":"exact"},{"name":"type 2 diabetes mellitus","type":"exact"},{"name":"type 2 diabetes mellitus non-insulin dependent","type":"exact"},{"name":"type 2 diabetes mellitus, susceptibility to","type":"related"},{"name":"type II diabetes","type":"exact"},{"name":"type II diabetes mellitus","type":"exact"}],"termid":"MONDO:0005148","terms_by_termid":{"MONDO:0005148":null,"MONDO:0014488":null},"xrefs":{"Monarch":{"xref_id":"0005148"}}}


id: PATO:0002274
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Multicolored quality inhering in a bearer by virtue of the bearer's being dappled with spots, patches, or blotches of different colors.","direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mottled","termid":"PATO:0002274"}


id: PBO:0046411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ependymin related 1","termid":"PBO:0046411"}


id: MONDO:0003729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infiltration of the skin and subcutaneous tissue by leukemic cells without evidence of leukemia in the bone marrow and peripheral blood. It results in clinically identifiable skin lesions. It may be the first manifestation of acute leukemia, preceding the involvement of the bone marrow and peripheral blood by the leukemic process.","definition_xrefs":["NCIT:C4983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aleukemic leukemia","termid":"MONDO:0003730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"aleukemic leukemia cutis","secondary_identifiers":["DOID:6003","UMLS:C0887846","MEDGEN:168394"],"synonyms":[{"name":"aleukemic leukemia cutis","type":"exact"},{"name":"leukaemia subleukemic","type":"related"},{"name":"leukemia subleukemic","type":"related"}],"termid":"MONDO:0003729","xrefs":{"Monarch":{"xref_id":"0003729"}}}


id: GO:0039690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral genome replication process where the template genome is positive stranded, single stranded RNA ((+)ssRNA). Replication of the positive strand leads to dsRNA formation, which in turn is transcribed into positive single stranded RNA.","definition_xrefs":["VZ:1116","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive stranded viral RNA replication","synonyms":[{"name":"ss(+) viral RNA replication","type":"related"}],"termid":"GO:0039690"}


id: PBO:0044240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cupin superfamily member 1, pseudogene","termid":"PBO:0044240"}


id: FYPO:0003061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the two nuclei in a zygote formed by conjugation with cellular fusion undergo meiosis before karyogamy with nuclear fusion is completed.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:23755176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"meiotic cell cycle in zygote with unfused nuclei","synonyms":[{"name":"haploid meiosis before karyogamy","type":"exact"},{"name":"twin haploid meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003061"}


id: PBO:0038615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin I converting enzyme","termid":"PBO:0038615"}


id: PBO:0064024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 58","termid":"PBO:0064024"}


id: GO:0061674
data:
  {"annotated_genes":["SJAG_16460"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95669],"is_not":false,"summary":null,"term":"GO:0061674"}]},"cv_name":"biological_process","definition":"Repair of the gaps in the DNA helix using a discontinuous template during double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":1,"genes_by_uniquename":{"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"gap filling involved in double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061674","terms_by_termid":{"GO:0061674":null}}


id: PBO:0048310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 21","termid":"PBO:0048310"}


id: PBO:0011135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER associated protein disulfide isomerase Pdi2","termid":"PBO:0011135"}


id: MONDO:0000062
data:
  {"annotated_genes":["SJAG_03786","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014050"},{"annotations":[86476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013783"}]},"cv_name":"mondo","definition":"A microphthalmia that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"microphthalmia","termid":"MONDO:0021129"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03497":null,"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated microphthalmia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:251600","DOID:0080637"],"synonyms":[{"name":"microphthalmia, isolated","type":"exact"},{"name":"nonsyndromic microphthalmia","type":"exact"}],"termid":"MONDO:0000062","terms_by_termid":{"MONDO:0013783":null,"MONDO:0014050":null},"xrefs":{"Monarch":{"xref_id":"0000062"}}}


id: PBO:0074960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-2","termid":"PBO:0074960"}


id: MONDO:0017085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformation of the neurenteric canal, spinal cord and column (obsolete MONDO:0017085)","secondary_identifiers":["Orphanet:268843"],"termid":"MONDO:0017085","xrefs":{"Monarch":{"xref_id":"0017085"}}}


id: PBO:0089743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2009 family protein, conserved in yeast and apicomplexa","termid":"PBO:0089743"}


id: MONDO:0015774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thoraco-abdominal enteric duplication is a rare, syndromic intestinal malformation characterized by single or multiple smooth-walled, often tubular, cystic lesions, which on occasion contain ectopic gastric mucosa, located in the thorax (usually in the posterior mediastinum and to the right of the midline) and in the abdomen. Infants usually present with respiratory distress and older patients with heartburn, abdominal pain, vomiting and/or malena. Vertebral anomalies in the lower cervical spine, with CNS involvement, are frequently present and complications, such as bowel obstruction, perforation and intussusception, have also been reported.","definition_xrefs":["Orphanet:1759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"thoraco-abdominal enteric duplication","secondary_identifiers":["MEDGEN:1372227","GARD:5181","SCTID:733628001","icd11.foundation:1267632171","UMLS:C4518084"],"synonyms":[{"name":"thoraco abdominal enteric duplication","type":"related"}],"termid":"MONDO:0015774","xrefs":{"Monarch":{"xref_id":"0015774"}}}


id: GO:0071604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of any member of the transforming growth factor-beta family of cytokines due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Transforming growth factor-beta family members include TGF-B1, TGF-B2, and TGF-B3.","definition_xrefs":["GOC:add","GOC:rv","PMID:16891311","PMID:2022183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transforming growth factor beta production","secondary_identifiers":["GO:0038044"],"synonyms":[{"name":"TGF-B production","type":"exact"},{"name":"TGF-beta production","type":"exact"},{"name":"TGFb production","type":"exact"},{"name":"TGFbeta production","type":"exact"},{"name":"transforming growth factor-beta production","type":"exact"},{"name":"transforming growth factor-beta secretion","type":"narrow"}],"termid":"GO:0071604"}


id: PBO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 9","termid":"PBO:0071980"}


id: PBO:0053577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 598","termid":"PBO:0053577"}


id: GO:0042919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0721662544","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"benzoate transport","termid":"GO:0042919"}


id: MONDO:0014874
data:
  {"annotated_genes":["SJAG_04907"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85891],"is_not":false,"summary":null,"term":"MONDO:0014874"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the TSEN15 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia type 2","termid":"MONDO:0016759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0005559"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, type 2F","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16178","OMIM:617026","DOID:0112329","MEDGEN:934724","UMLS:C4310757"],"synonyms":[{"name":"PCH2F","type":"exact"},{"name":"TSEN15 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in TSEN15","type":"exact"},{"name":"pontocerebellar hypoplasia, type 2F","type":"exact"},{"name":"pontocerebellar hypoplasia, type 2F; PCH2F","type":"exact"}],"termid":"MONDO:0014874","terms_by_termid":{"MONDO:0014874":null},"xrefs":{"Monarch":{"xref_id":"0014874"}}}


id: MONDO:0000854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Stickler syndrome (obsolete MONDO:0000854)","termid":"MONDO:0000854","xrefs":{"Monarch":{"xref_id":"0000854"}}}


id: PBO:0108905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP6 pseudogene 2","termid":"PBO:0108905"}


id: PBO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"truncated C terminal region of membrane transporter","termid":"PBO:0000087"}


id: PBO:0083910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent NAD(P)H:quinone reductase; role in apoptosis-like cell death; may be involved in quinone detoxification; expression elevated at low temperature; sequesters the Cin5p transcription factor in the cytoplasm in complex with the proteasome under reducing conditions","termid":"PBO:0083910"}


id: PBO:0066767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 65","termid":"PBO:0066767"}


id: PATO:0001535
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's being marked with small spots, patches, or specks of hue or degree of saturation differing from that of the background.","definition_xrefs":["merriam-webster.:merriam-webster."],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dappled","synonyms":[{"name":"speckled","type":"related"}],"termid":"PATO:0001535"}


id: PR:Q7Z9I5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.05","synonyms":[{"name":"Spom972h-wtf7","type":"exact"}],"termid":"PR:Q7Z9I5"}


id: GO:0032397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I protein complex to mediate signaling that activates a lymphocyte.","definition_xrefs":["GOC:add","PMID:11858820","PMID:9597134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class I receptor activity","termid":"GO:0032393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"activating MHC class I receptor activity","termid":"GO:0032397"}


id: PBO:0040299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP2B2 intronic transcript 1","termid":"PBO:0040299"}


id: GO:0097122
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin A2 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin A2-CDK1 complex","termid":"GO:0097122"}


id: GO:0050738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a fructosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"fructosyltransferase activity","termid":"GO:0050738"}


id: PBO:0030021
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_asymmetric_protein_localization_to_old_or_new_mitotic_spindle_pole_body_during_anaphase,_with_protein_symmetrically_localized_to_both_spindle_pole_bodies","termid":"PBO:0030021"}


id: PBO:0061453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 5 group A member 1","termid":"PBO:0061453"}


id: MONDO:1011243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital nystagmus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus, non-human animal","termid":"MONDO:1010325"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital nystagmus, dog","secondary_identifiers":["OMIA:000731-9615"],"termid":"MONDO:1011243","xrefs":{"Monarch":{"xref_id":"1011243"}}}


id: GO:0071301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B1 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin B1","termid":"GO:0010266"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B1","synonyms":[{"name":"cellular response to thiamin","type":"exact"},{"name":"cellular response to thiamine","type":"exact"}],"termid":"GO:0071301"}


id: MONDO:0021228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the brainstem.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brainstem neoplasm","secondary_identifiers":["Orphanet:36414","MEDGEN:146207","EFO:1001767","UMLS:C0677866","NCIT:C4869"],"synonyms":[{"name":"Brain stem neoplasm","type":"exact"},{"name":"brain stem tumor","type":"exact"},{"name":"brain stem tumour","type":"exact"},{"name":"brainstem neoplasm (disease)","type":"exact"},{"name":"brainstem tumor","type":"exact"},{"name":"brainstem tumour","type":"exact"},{"name":"neoplasm of brain stem","type":"exact"},{"name":"neoplasm of brainstem","type":"exact"},{"name":"neoplasm of the brain stem","type":"exact"},{"name":"neoplasm of the brainstem","type":"exact"},{"name":"tumor of brain stem","type":"exact"},{"name":"tumor of brainstem","type":"exact"},{"name":"tumor of the brain stem","type":"exact"},{"name":"tumor of the brainstem","type":"exact"},{"name":"tumour of brain stem","type":"exact"},{"name":"tumour of brainstem","type":"exact"},{"name":"tumour of the brain stem","type":"exact"},{"name":"tumour of the brainstem","type":"exact"}],"termid":"MONDO:0021228","xrefs":{"Monarch":{"xref_id":"0021228"}}}


id: PBO:0048148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 7","termid":"PBO:0048148"}


id: PBO:0069607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 884, pseudogene","termid":"PBO:0069607"}


id: PBO:0026878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_multiseptate_cell,_septa_grouped","termid":"PBO:0026878"}


id: PBO:0085039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonessential component of the TIM23 complex; interacts with the Translocase of the Outer Mitochondrial membrane (TOM complex) and with respiratory enzymes; may regulate the Translocase of the Inner Mitochondrial membrane (TIM23 complex) activity","termid":"PBO:0085039"}


id: MONDO:0021028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of nail anomaly that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic nail anomaly (obsolete MONDO:0021028)","secondary_identifiers":["Orphanet:183454"],"synonyms":[{"name":"genetic nail anomaly","type":"exact"}],"termid":"MONDO:0021028","xrefs":{"Monarch":{"xref_id":"0021028"}}}


id: MONDO:0007526
data:
  {"annotated_genes":["SJAG_00222","SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012873"},{"annotations":[85830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014139"}]},"cv_name":"mondo","definition":"A form of Ehlers-Danlos syndrome characterized by a premature aging with sparse hair, macrocephaly, loose elastic skin, failure to thrive, joint laxity, psychomotor retardation, hypotonia, and defective wound healing with atrophic scars.","definition_xrefs":["Orphanet:75496"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00222":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, spondylodysplastic type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:720861000","MESH:C536201","DOID:0050802","GARD:9991"],"synonyms":[{"name":"B4GALT7-CDG","type":"exact"},{"name":"EDS, progeroid type","type":"exact"},{"name":"EDSSPD1","type":"narrow"},{"name":"Ehlers-Danlos syndrome progeroid type","type":"exact"},{"name":"Ehlers-Danlos syndrome with short stature and limb anomalies","type":"narrow"},{"name":"Ehlers-Danlos syndrome, progeroid type","type":"related"},{"name":"Ehlers-Danlos syndrome, progeroid type (former)","type":"related"},{"name":"Ehlers-Danlos syndrome, spondylodysplastic type, 1","type":"narrow"},{"name":"PDS","type":"exact"},{"name":"Pds, defective biosynthesis of","type":"narrow"},{"name":"XGPT deficiency","type":"narrow"},{"name":"defective biosynthesis of proteodermatan sulfate","type":"exact"},{"name":"defective biosynthesis of proteodermatan sulphate","type":"exact"},{"name":"dermatan sulfate proteoglycan","type":"narrow"},{"name":"dermatan sulphate proteoglycan","type":"narrow"},{"name":"galactosyltransferase 1 deficiency","type":"narrow"},{"name":"galactosyltransferase I deficiency","type":"exact"},{"name":"proteodermatan sulfate, defective biosynthesis of","type":"narrow"},{"name":"spondylodysplastic Ehlers-Danlos syndrome","type":"related"},{"name":"xylosylprotein 4-beta-galactosyltransferase deficiency","type":"narrow"}],"termid":"MONDO:0007526","terms_by_termid":{"MONDO:0012873":null,"MONDO:0014139":null},"xrefs":{"Monarch":{"xref_id":"0007526"}}}


id: PBO:0043842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase vitellogenic like","termid":"PBO:0043842"}


id: MONDO:0018967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic agammaglobulinemia","termid":"MONDO:0016463"},{"relation_name":"is_a","term_name":"congenital agammaglobulinemia","termid":"MONDO:0001902"},{"relation_name":"is_a","term_name":"isolated growth hormone deficiency type III","termid":"MONDO:0010615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002320","MONDO:0005570"],"is_obsolete":false,"name":"short stature due to isolated growth hormone deficiency with X-linked hypogammaglobulinemia","secondary_identifiers":["GARD:16538","Orphanet:632"],"termid":"MONDO:0018967","xrefs":{"Monarch":{"xref_id":"0018967"}}}


id: PBO:0077664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 11a","termid":"PBO:0077664"}


id: GO:1903392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adherens junction organization.","definition_xrefs":["PMID:21724833","GO_REF:0000058","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of adherens junction organization","termid":"GO:1903391"},{"relation_name":"negatively_regulates","term_name":"adherens junction organization","termid":"GO:0034332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adherens junction organization","synonyms":[{"name":"down regulation of adherens junction assembly and maintenance","type":"exact"},{"name":"down regulation of adherens junction organisation","type":"exact"},{"name":"down regulation of adherens junction organization","type":"exact"},{"name":"down-regulation of adherens junction assembly and maintenance","type":"exact"},{"name":"down-regulation of adherens junction organisation","type":"exact"},{"name":"down-regulation of adherens junction organization","type":"exact"},{"name":"downregulation of adherens junction assembly and maintenance","type":"exact"},{"name":"downregulation of adherens junction organisation","type":"exact"},{"name":"downregulation of adherens junction organization","type":"exact"},{"name":"inhibition of adherens junction assembly and maintenance","type":"narrow"},{"name":"inhibition of adherens junction organisation","type":"narrow"},{"name":"inhibition of adherens junction organization","type":"narrow"},{"name":"negative regulation of adherens junction assembly and maintenance","type":"exact"},{"name":"negative regulation of adherens junction organisation","type":"exact"}],"termid":"GO:1903392"}


id: FYPO:0006749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transfer RNA precursor(s) (pre-tRNA) measured in a cell is higher than normal. Total pre-tRNA or a specific pre-tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level during vegetative growth","termid":"FYPO:0008101"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased pre-tRNA level during vegetative growth","synonyms":[{"name":"increased pre-tRNA accumulation during vegetative growth","type":"related"},{"name":"increased pre-tRNA level during mitotic cell cycle","type":"related"},{"name":"increased pre-tRNA transcript level during vegetative growth","type":"exact"},{"name":"increased tRNA level during vegetative growth","type":"broad"},{"name":"increased tRNA primary transcript level during vegetative growth","type":"exact"},{"name":"increased transfer RNA precursor level during vegetative growth","type":"exact"}],"termid":"FYPO:0006749"}


id: GO:0098872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled neurotransmitter receptor activity occurring in the postsynaptic membrane, that is involved in regulating the cytosolic concentration of calcium ions in the postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","termid":"GO:0099583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0098872"}


id: PR:Q09872
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eti1 gene.","definition_xrefs":["UniProtKB:Q09872","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12G12.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.09","synonyms":[{"name":"Spom972h-eti1","type":"exact"}],"termid":"PR:Q09872"}


id: MONDO:0005247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infectious process affecting any part of the urinary tract, most commonly the bladder and the urethra. Symptoms include urinary urgency and frequency, burning sensation during urination, lower abdominal discomfort, and cloudy urine.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"urinary tract infection","termid":"MONDO:0100338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial urinary tract infection","secondary_identifiers":["NCIT:C50791","MEDGEN:675826","ICD9:599.0","UMLS:C0729524","SCTID:68566005"],"synonyms":[{"name":"UTI","type":"broad"},{"name":"bacterial urinary tract infection (disease)","type":"exact"},{"name":"infection, urinary tract","type":"broad"},{"name":"tract, infection of urinary","type":"broad"},{"name":"urinary tract infection","type":"broad"},{"name":"urinary tract infection (disease)","type":"broad"},{"name":"urinary tract infectious disease","type":"broad"}],"termid":"MONDO:0005247","xrefs":{"Monarch":{"xref_id":"0005247"}}}


id: GO:0098927
data:
  {"annotated_genes":["SJAG_01309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045022"}]},"cv_name":"biological_process","definition":"A cellular transport process in which transported substances are moved in membrane-bounded vesicles between endosomal compartments, e.g, between early endosome and sorting endosome.","definition_xrefs":["GOC:dos","PMID:10930469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosomal transport","termid":"GO:0016197"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vesicle-mediated transport between endosomal compartments","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0098927","terms_by_termid":{"GO:0045022":null}}


id: GO:0009227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nucleotide-sugars, any nucleotide-carbohydrate in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule catabolic process","termid":"GO:0034656"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleotide-sugar catabolic process","synonyms":[{"name":"nucleotide-sugar breakdown","type":"exact"},{"name":"nucleotide-sugar catabolism","type":"exact"},{"name":"nucleotide-sugar degradation","type":"exact"}],"termid":"GO:0009227"}


id: PBO:0082280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anti-silencing protein; causes derepression of silent loci when overexpressed","termid":"PBO:0082280"}


id: MONDO:0015379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cervical dermoid cyst is a rare, benign cutaneous neoplasm containing keratinized epithelium and dermal derivatives, such as hair follicles, sweat and sebaceous glands, smooth muscle or fibroadipose tissue which usually manifests as a slow-growing, painless mass in the submandibular or sublingual space. Depending on the location, and especially after sudden enlargement, it can cause dyspnea, dysphagia or dysphonia.","definition_xrefs":["Orphanet:141046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermoid cyst","termid":"MONDO:0002378"},{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"},{"relation_name":"is_a","term_name":"neoplasm of neck","termid":"MONDO:0021351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical dermoid cyst","secondary_identifiers":["MEDGEN:1643725","SCTID:763129001","GARD:19937","UMLS:C4706299"],"synonyms":[{"name":"dermoid cyst of the neck","type":"exact"}],"termid":"MONDO:0015379","xrefs":{"Monarch":{"xref_id":"0015379"}}}


id: SO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_donor_variant (SO:0001575) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_donor_variant","termid":"SO:0001575"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant_NMD_triggering","synonyms":[{"name":"splice donor variant-NMD triggering","type":"exact"},{"name":"splice donor variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002325"}


id: SO:0000734
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exemplar is a representative cDNA sequence for each gene. The exemplar approach is a method that usually involves some initial clustering into gene groups and the subsequent selection of a representative from each gene group.","direct_ancestors":[{"relation_name":"has_quality","term_name":"exemplar","termid":"SO:0000864"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exemplar_mRNA","synonyms":[{"name":"exemplar mRNA","type":"exact"}],"termid":"SO:0000734"}


id: MONDO:0008703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessively inherited form of acromesomelic dysplasia characterized by severe dwarfism at birth, abnormalities confined to limbs, severe shortening and deformity of long bones, fusion or absence of carpal and tarsal bones, ball shaped fingers and, occasionally, polydactyly and absent joints. As seen in acromesomelic dysplasia, Hunter-Thomson type and acromesomelic dysplasia, Maroteaux Type, facial features and intelligence are normal.","definition_xrefs":["Orphanet:2098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achondrogenesis","termid":"MONDO:0019648"},{"relation_name":"is_a","term_name":"acromesomelic dysplasia","termid":"MONDO:0019696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acromesomelic dysplasia 2A","secondary_identifiers":["NANDO:2201345","NCIT:C3816","DOID:0080052","MEDGEN:75557","NANDO:2201346","UMLS:C0265260","GARD:1300","OMIM:200700"],"synonyms":[{"name":"AMDG","type":"related"},{"name":"Brazilian achondrogenesis","type":"related"},{"name":"GREBE chondrodysplasia","type":"exact"},{"name":"Grebe chondrodysplasia","type":"exact"},{"name":"Grebe dysplasia","type":"exact"},{"name":"Grebe syndrome","type":"related"},{"name":"Langer-Saldino achondrogenesis","type":"exact"},{"name":"achondrogenesis type II (formerly)","type":"related"},{"name":"achondrogenesis, Brazilian","type":"related"},{"name":"achondrogenesis, type II","type":"related"},{"name":"achondrogenesis, type II, formerly","type":"related"},{"name":"acromesomelic dysplasia 2A","type":"exact"},{"name":"acromesomelic dysplasia, Grebe type","type":"exact"},{"name":"chondrodysplasia, Grebe type","type":"exact"},{"name":"hypochondrogenesis","type":"related"},{"name":"type II achondrogenesis","type":"exact"}],"termid":"MONDO:0008703","xrefs":{"Monarch":{"xref_id":"0008703"}}}


id: FYPO:0006656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the unwinding of G-quadruplex DNA structures occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"decreased G-quadruplex DNA unwinding","synonyms":[{"name":"decreased G-quadruplex DNA unwinding during mitotic cell cycle","type":"related"},{"name":"decreased G-quadruplex DNA unwinding during vegetative growth","type":"exact"},{"name":"decreased G-quartet DNA unwinding","type":"exact"},{"name":"decreased G4 DNA unwinding","type":"exact"},{"name":"reduced G-quadruplex DNA unwinding","type":"exact"}],"termid":"FYPO:0006656"}


id: FYPO:0006308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form actin cables that are thicker than normal in the medial region of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thick actin cables","termid":"FYPO:0002437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0004803","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"thick actin cables in medial region","synonyms":[{"name":"increased actin cable thickness in medial region","type":"exact"},{"name":"thick actin cables in medial region during mitotic cell cycle","type":"related"},{"name":"thick actin cables in medial region during vegetative growth","type":"exact"},{"name":"thick actin cables in medial region of cell","type":"exact"},{"name":"thick formin-nucleated actin cables in medial region","type":"exact"}],"termid":"FYPO:0006308"}


id: GO:1900383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic plasticity, the ability of synapses to change as circumstances require, via receptor localization to the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell. Processes may include receptor transport to, and/or maintenance at, the synapse.","definition_xrefs":["GOC:TermGenie","PMID:22464329","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"regulation of synaptic plasticity by receptor localization to synapse","synonyms":[{"name":"regulation of synaptic plasticity by receptor localisation to synapse","type":"exact"}],"termid":"GO:1900383"}


id: GO:0002724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of T cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"regulates","term_name":"T cell cytokine production","termid":"GO:0002369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of T cell cytokine production","synonyms":[{"name":"regulation of T lymphocyte cytokine production","type":"exact"},{"name":"regulation of T-cell cytokine production","type":"exact"},{"name":"regulation of T-lymphocyte cytokine production","type":"exact"}],"termid":"GO:0002724"}


id: GO:0030281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of cutaneous epidermal structures such as hairs, scales, or feathers.","definition_xrefs":["ISBN:0878932437","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of cutaneous appendage","termid":"GO:0030281"}


id: PBO:0079169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocator protein 2","termid":"PBO:0079169"}


id: GO:0120208
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Telodendria are projections that originate from the axon pedicle and form gap junctions with other neurons.","definition_xrefs":["PMID:14755521","PMID:11506430","GOC:cvs","PMID:8390352","GOC:krc","PMID:11074451","PMID:20533354","PMID:29127712","PMID:451992","PMID:1646866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"telodendria","termid":"GO:0120208"}


id: SO:0001217
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for an RNA that can be translated into a protein.","direct_ancestors":[{"relation_name":"has_quality","term_name":"protein_coding","termid":"SO:0000010"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_coding_gene","synonyms":[{"name":"protein coding gene","type":"exact"}],"termid":"SO:0001217"}


id: PBO:0047950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(17)(q23.1)","termid":"PBO:0047950"}


id: PBO:0068445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 19, pseudogene","termid":"PBO:0068445"}


id: PBO:0088312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi galactosylxylosylprotein 3-beta-galactosyltransferase Pvg3","termid":"PBO:0088312"}


id: MONDO:0009752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropathy, painful","secondary_identifiers":["UMLS:C1850383","OMIM:256870","MEDGEN:342490","MESH:C564945"],"synonyms":[{"name":"neuropathy, painful","type":"exact"}],"termid":"MONDO:0009752","xrefs":{"Monarch":{"xref_id":"0009752"}}}


id: MOD:01674
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetaminohexosyl)-L-asparagine.","definition_xrefs":["OMSSA:182","Unimod:43#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-(N-acetylamino)hexosyl-L-asparagine","synonyms":[{"name":"(S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"HexNAcAsn","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"},{"name":"N4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(2-acetylamino-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(N-acetylhexosaminyl)asparagine","type":"exact"},{"name":"N4-asparagine-beta-N-acetylhexosaminide","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4HexNAcAsn","type":"exact"},{"name":"hexNAcN","type":"exact"}],"termid":"MOD:01674"}


id: MONDO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete microcephalic primordial dwarfism (obsolete MONDO:0000139)","termid":"MONDO:0000139","xrefs":{"Monarch":{"xref_id":"0000139"}}}


id: GO:0032407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MutSalpha mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex binding","termid":"GO:0032404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MutSalpha complex binding","termid":"GO:0032407"}


id: MONDO:0013126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bartter syndrome, type 4B (obsolete MONDO:0013126)","termid":"MONDO:0013126","xrefs":{"Monarch":{"xref_id":"0013126"}}}


id: MONDO:0015918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare neurodegenerative disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare neurodegenerative disease (obsolete MONDO:0015918)","secondary_identifiers":["Orphanet:182070"],"synonyms":[{"name":"rare neurodegenerative disease","type":"exact"}],"termid":"MONDO:0015918","xrefs":{"Monarch":{"xref_id":"0015918"}}}


id: PBO:0067892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 194","termid":"PBO:0067892"}


id: PBO:0068691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 72, pseudogene","termid":"PBO:0068691"}


id: PR:P40233
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cki1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.06c","synonyms":[{"name":"SPBC1347.06c","type":"related"},{"name":"Spom972h-cki1","type":"exact"}],"termid":"PR:P40233"}


id: MONDO:0020263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia with oculomotor anomaly (obsolete MONDO:0020263)","secondary_identifiers":["Orphanet:98693"],"termid":"MONDO:0020263","xrefs":{"Monarch":{"xref_id":"0020263"}}}


id: PBO:0003470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic valine-tRNA ligase Vrs1/Vas1","termid":"PBO:0003470"}


id: RO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is ubiquitously expressed in y if and only if x is expressed in y, and the majority of cells in y express x","direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_in","termid":"RO:0002206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitously_expressed_in","termid":"RO:0002291"}


id: PBO:0066752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 50","termid":"PBO:0066752"}


id: MONDO:0000711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyotrophic lateral sclerosis type 13 (obsolete MONDO:0000711)","termid":"MONDO:0000711","xrefs":{"Monarch":{"xref_id":"0000711"}}}


id: GO:0002051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast fate commitment","termid":"GO:0002051"}


id: PBO:0070356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 29","termid":"PBO:0070356"}


id: GO:1904899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hepatic stellate cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:15358192","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast proliferation","termid":"GO:0048146"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell proliferation","termid":"GO:1904897"},{"relation_name":"positively_regulates","term_name":"hepatic stellate cell proliferation","termid":"GO:1990922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatic stellate cell proliferation","synonyms":[{"name":"activation of Ito cell proliferation","type":"narrow"},{"name":"activation of hepatic perisinusoidal cell proliferation","type":"narrow"},{"name":"activation of hepatic stellate cell proliferation","type":"narrow"},{"name":"activation of perisinusoidal cell proliferation","type":"narrow"},{"name":"positive regulation of Ito cell proliferation","type":"exact"},{"name":"positive regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"positive regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"up regulation of Ito cell proliferation","type":"exact"},{"name":"up regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"up regulation of hepatic stellate cell proliferation","type":"exact"},{"name":"up regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"up-regulation of Ito cell proliferation","type":"exact"},{"name":"up-regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"up-regulation of hepatic stellate cell proliferation","type":"exact"},{"name":"up-regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"upregulation of Ito cell proliferation","type":"exact"},{"name":"upregulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"upregulation of hepatic stellate cell proliferation","type":"exact"},{"name":"upregulation of perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1904899"}


id: PBO:0004944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I and III subunit Rpc40","termid":"PBO:0004944"}


id: MONDO:0020221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary glaucoma due to a proliferation and differentiation anomaly (obsolete MONDO:0020221)","secondary_identifiers":["Orphanet:98637"],"termid":"MONDO:0020221","xrefs":{"Monarch":{"xref_id":"0020221"}}}


id: GO:0106196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic anions linked to the hydrolysis of a nucleoside triphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic anions linked to the hydrolysis of a nucleoside triphosphate (obsolete GO:0106196)","termid":"GO:0106196"}


id: MONDO:0016202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of rhegmatogenous retinal detachment.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Stickler syndrome, type I, nonsyndromic ocular","termid":"MONDO:0012287"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"rhegmatogenous retinal detachment","termid":"MONDO:0005464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"autosomal dominant rhegmatogenous retinal detachment","secondary_identifiers":["Orphanet:209867","icd11.foundation:1308905567","MEDGEN:322821","UMLS:C1836081","GARD:17104"],"synonyms":[{"name":"DRRD","type":"exact"},{"name":"rhegmatogenous retinal detachment, autosomal dominant","type":"exact"}],"termid":"MONDO:0016202","xrefs":{"Monarch":{"xref_id":"0016202"}}}


id: GO:0019251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12) in the absence of oxygen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cobalamin biosynthetic process","termid":"GO:0009236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766","GO:0033013"],"is_obsolete":false,"name":"anaerobic cobalamin biosynthetic process","secondary_identifiers":["MetaCyc:COBALSYN-PWY"],"synonyms":[{"name":"anaerobic cobalamin anabolism","type":"exact"},{"name":"anaerobic cobalamin biosynthesis","type":"exact"},{"name":"anaerobic cobalamin formation","type":"exact"},{"name":"anaerobic cobalamin synthesis","type":"exact"},{"name":"anaerobic vitamin B12 biosynthesis","type":"exact"},{"name":"anaerobic vitamin B12 biosynthetic process","type":"exact"},{"name":"cobalamin biosynthesis, anaerobic","type":"exact"},{"name":"cobalamin biosynthetic process, anaerobic","type":"exact"},{"name":"vitamin B12 biosynthesis, anaerobic","type":"exact"},{"name":"vitamin B12 biosynthetic process, anaerobic","type":"exact"}],"termid":"GO:0019251"}


id: PBO:0064906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 regulatory subunit B, beta","termid":"PBO:0064906"}


id: GO:0075001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an infection structure of the symbiont to its host via adhesion molecules, general stickiness etc., either directly or indirectly. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host","termid":"GO:0044406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont infection structure to host","secondary_identifiers":["Reactome:R-HSA-9664407"],"synonyms":[{"name":"adhesion of symbiont infection structure to host during symbiotic interaction","type":"exact"},{"name":"attachment of symbiont infection structure to host","type":"exact"}],"termid":"GO:0075001"}


id: PBO:0070970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 8","termid":"PBO:0070970"}


id: PBO:0028555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_import_into_nucleus","termid":"PBO:0028555"}


id: PBO:0059765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 39","termid":"PBO:0059765"}


id: GO:0061029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the eyelid in a camera-type eye from its formation to the mature state. The eyelid is a membranous cover that helps protect and lubricate the eye.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eyelid development in camera-type eye","termid":"GO:0061029"}


id: MONDO:0031447
data:
  {"annotated_genes":["SJAG_02509","SJAG_04003","SJAG_04387"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800047"},{"annotations":[86753,86754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030827"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"macrothrombocytopenia, isolated","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:613112"],"termid":"MONDO:0031447","terms_by_termid":{"MONDO:0030827":null,"MONDO:0800047":null},"xrefs":{"Monarch":{"xref_id":"0031447"}}}


id: MONDO:0012586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any coronary artery disease in which the cause of the disease is a mutation in the LRP6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"coronary artery disease, autosomal dominant 2","secondary_identifiers":["OMIM:610947","UMLS:C1970440","MEDGEN:370259","MESH:C567045"],"synonyms":[{"name":"ADCAD2","type":"related"},{"name":"LRP6 coronary artery disease","type":"exact"},{"name":"coronary artery disease caused by mutation in LRP6","type":"exact"},{"name":"coronary artery disease, autosomal dominant 2","type":"exact"},{"name":"coronary artery disease, autosomal dominant type 2","type":"exact"},{"name":"coronary artery disease, autosomal dominant, 2","type":"exact"}],"termid":"MONDO:0012586","xrefs":{"Monarch":{"xref_id":"0012586"}}}


id: PBO:0040966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 37","termid":"PBO:0040966"}


id: PBO:0018188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial magnesium ion transmembrane transporter Mme1 (predicted)","termid":"PBO:0018188"}


id: PBO:0074084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 1","termid":"PBO:0074084"}


id: GO:0032930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of enzymatic generation of superoxide by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide anion generation","termid":"GO:0032928"},{"relation_name":"is_a","term_name":"positive regulation of reactive oxygen species metabolic process","termid":"GO:2000379"},{"relation_name":"positively_regulates","term_name":"superoxide anion generation","termid":"GO:0042554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of superoxide anion generation","synonyms":[{"name":"activation of superoxide release","type":"narrow"},{"name":"positive regulation of superoxide release","type":"exact"},{"name":"stimulation of superoxide release","type":"narrow"},{"name":"up regulation of superoxide release","type":"exact"},{"name":"up-regulation of superoxide release","type":"exact"},{"name":"upregulation of superoxide release","type":"exact"}],"termid":"GO:0032930"}


id: MONDO:0013382
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86821],"is_not":false,"summary":null,"term":"MONDO:0013382"}]},"cv_name":"mondo","definition":"Progressive polyneuropathy with bilateral striatal necrosis is a rare, genetic disorder of thiamine metabolism and transport characterized by the childhood-onset of recurrent episodes of flaccid paralysis and encephalopathy, associated with bilateral striatal necrosis and chronic progressive axonal polyneuropathy with proximal and distal muscle weakness, areflexia, contractures and foot deformities.","definition_xrefs":["Orphanet:217396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine-responsive dysfunction syndrome","termid":"MONDO:0000152"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"progressive demyelinating neuropathy with bilateral striatal necrosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17123","MEDGEN:462323","OMIM:613710","UMLS:C3150973"],"synonyms":[{"name":"THMD4","type":"related"},{"name":"bilateral striatal Degeneration and progressive polyneuropathy","type":"related"},{"name":"progressive polyneuropathy with bilateral striatal necrosis","type":"related"},{"name":"striatal Necrosis, bilateral, and progressive polyneuropathy","type":"related"},{"name":"thiamine metabolism dysfunction syndrome 4 (bilateral striatal degeneration and progressive polyneuropathy type)","type":"related"},{"name":"thiamine metabolism dysfunction syndrome 4 (progressive polyneuropathy type)","type":"exact"}],"termid":"MONDO:0013382","terms_by_termid":{"MONDO:0013382":null},"xrefs":{"Monarch":{"xref_id":"0013382"}}}


id: PBO:0074380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 6","termid":"PBO:0074380"}


id: GO:0006696
data:
  {"annotated_genes":["SJAG_04270","SJAG_03018","SJAG_03235","SJAG_01474","SJAG_03598","SJAG_04810","SJAG_03750","SJAG_00453","SJAG_00413","SJAG_03024","SJAG_02982","SJAG_03509","SJAG_04217","SJAG_03531","SJAG_02104","SJAG_02044","SJAG_03249","SJAG_03715","SJAG_02855","SJAG_00770","SJAG_01307","SJAG_04018","SJAG_03929","SJAG_00370","SJAG_00717","SJAG_04499","SJAG_02719","SJAG_00624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65653,69634,70596,71349,71525,72922,73765,74043,75944,76020,76117,76934,79959,80043,80178,88262,89446,94428,107326,107639,109039,109879,115025,116335],"is_not":false,"summary":null,"term":"GO:0006696"},{"annotations":[93678],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[109644],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[105643,88352],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ergosterol, (22E)-ergosta-5,7,22-trien-3-beta-ol, a sterol found in ergot, yeast and moulds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergosterol metabolic process","termid":"GO:0008204"},{"relation_name":"is_a","term_name":"sterol biosynthetic process","termid":"GO:0016126"},{"relation_name":"is_a","term_name":"phytosteroid biosynthetic process","termid":"GO:0016129"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"ergosterol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"ergosterol anabolism","type":"exact"},{"name":"ergosterol biosynthesis","type":"exact"},{"name":"ergosterol formation","type":"exact"},{"name":"ergosterol synthesis","type":"exact"}],"termid":"GO:0006696","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0070452":null}}


id: GO:1903027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of opsonization.","definition_xrefs":["GOC:BHF","PMID:22333221","GO_REF:0000058","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"opsonization","termid":"GO:0008228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of opsonization","termid":"GO:1903027"}


id: PBO:0005257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation release factor eRF1 family protein (predicted)","termid":"PBO:0005257"}


id: GO:0042752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a circadian rhythm. A circadian rhythm is a biological process in an organism that recurs with a regularity of approximately 24 hours.","definition_xrefs":["GOC:jl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circadian rhythm","termid":"GO:0042752"}


id: PBO:0081203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 4","termid":"PBO:0081203"}


id: PBO:0001585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZZ type","termid":"PBO:0001585"}


id: GO:0004018
data:
  {"annotated_genes":["SJAG_02850"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76601],"is_not":false,"summary":null,"term":"GO:0004018"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N6-(1,2-dicarboxyethyl)AMP = fumarate + AMP.","definition_xrefs":["RHEA:16853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:AMPSYN-RXN","KEGG_REACTION:R01083"],"synonyms":[{"name":"6-N-(1,2-dicarboxyethyl)AMP AMP-lyase activity","type":"related"},{"name":"N6-(1,2-dicarboxyethyl)AMP AMP-lyase activity","type":"related"},{"name":"adenylosuccinase activity","type":"broad"},{"name":"adenylosuccinate lyase activity","type":"broad"},{"name":"succino AMP-lyase activity","type":"broad"}],"termid":"GO:0004018","terms_by_termid":{"GO:0004018":null}}


id: GO:0018256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a formyl group to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein formylation","synonyms":[{"name":"protein amino acid formylation","type":"exact"}],"termid":"GO:0018256"}


id: GO:0043212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + carbohydrate(in) -> ADP + phosphate + carbohydrate(out).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"carbohydrate-exporting ABC transporter activity","synonyms":[{"name":"carbohydrate-exporting ATPase activity","type":"broad"}],"termid":"GO:0043212"}


id: PBO:0076629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBK1 binding protein 1","termid":"PBO:0076629"}


id: PBO:0050821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyccin PI4KA lipid kinase complex subunit 1","termid":"PBO:0050821"}


id: PBO:0055055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2471","termid":"PBO:0055055"}


id: MOD:00230
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, two L-histidine residues and a two-iron two-sulfur cluster to bis-L-cysteinyl bis-L-histidino diiron disulfide.","definition_xrefs":["RESID:AA0225","PubMed:2765515","PubMed:9651245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"bis-L-cysteinyl bis-L-histidino diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"METAL Iron-sulfur (2Fe-2S); via pros nitrogen","type":"exact"},{"name":"Rieske iron-sulfur cofactor","type":"exact"},{"name":"bis-L-cysteinyl bis-L-histidino diiron disulfide","type":"exact"},{"name":"di-mu-sulfido(bis-S-cysteinyliron)(bis-N3'-histidinoiron)","type":"exact"}],"termid":"MOD:00230"}


id: GO:0052922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 isopentenyl diphosphate + (2E,6E,10E)-geranylgeranyl diphosphate = all-trans-hexaprenyl diphosphate + 2 diphosphate.","definition_xrefs":["RHEA:27555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"hexaprenyl diphosphate synthase (geranylgeranyl-diphosphate specific) activity","secondary_identifiers":["KEGG_REACTION:R09246","EC:2.5.1.82","MetaCyc:RXN-11485"],"synonyms":[{"name":"(all-E) hexaprenyl diphosphate synthase activity","type":"broad"},{"name":"(all-trans)-hexaprenyl-diphosphate synthase activity","type":"broad"},{"name":"hexaprenyl diphosphate synthase activity","type":"broad"},{"name":"hexaprenyl pyrophosphate synthetase activity","type":"broad"}],"termid":"GO:0052922"}


id: MONDO:0014265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Alzheimer disease in which the cause of the disease is a mutation in the ADAM10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease","termid":"MONDO:0004975"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"Alzheimer disease 18","secondary_identifiers":["OMIM:615590","UMLS:C3810041","DOID:0110050","MEDGEN:816371"],"synonyms":[{"name":"AD18","type":"exact"},{"name":"ADAM10 Alzheimer disease","type":"exact"},{"name":"Alzheimer disease 18","type":"exact"},{"name":"Alzheimer disease 18, late-onset","type":"related"},{"name":"Alzheimer disease 18, susceptibility to","type":"related"},{"name":"Alzheimer disease caused by mutation in ADAM10","type":"exact"},{"name":"Alzheimer disease type 18","type":"exact"},{"name":"Alzheimer's disease 18","type":"exact"},{"name":"Alzheimer's disease type 18","type":"exact"}],"termid":"MONDO:0014265","xrefs":{"Monarch":{"xref_id":"0014265"}}}


id: PBO:0067083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 118, pseudogene","termid":"PBO:0067083"}


id: MONDO:0001489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete urticaria pigmentosa (obsolete MONDO:0001489)","termid":"MONDO:0001489","xrefs":{"Monarch":{"xref_id":"0001489"}}}


id: PBO:0077948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 8-1","termid":"PBO:0077948"}


id: GO:0097270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The temporary recovery of response to a stimulus when a novel stimulus is added.","definition_xrefs":["Wikipedia:Habituation","PMID:11390637","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonassociative learning","termid":"GO:0046958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dishabituation","termid":"GO:0097270"}


id: PBO:0084980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; reduces many aldehyde compounds including glycolaldehyde, formaldehyde and furfural; transcription unregulated by furfural, 5-hydroxymethylfurfural (HMF) and the mycotoxin patulin; expression increased by multidrug resistance transcription factors Yrm1p and Yrr1p; member of atypical subgroup 7 of the short-chain dehydrogenase/reductase (SDR) family; localizes to the cytoplasm; SWAT-GFP and mCherry fusion proteins localize to the ER and vacuole respectively","termid":"PBO:0084980"}


id: GO:0045268
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The hexamer that possesses the catalytic activity of the plasma membrane hydrogen-transporting ATP synthase. Examples of this component are found in Bacterial species.","definition_xrefs":["PMID:10838056","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase, catalytic core (obsolete GO:0045268)","synonyms":[{"name":"hydrogen-transporting ATP synthase, catalytic core","type":"broad"},{"name":"proton-transporting ATP synthase, catalytic core","type":"broad"}],"termid":"GO:0045268"}


id: PBO:0004391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1","termid":"PBO:0004391"}


id: PR:O74791
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanine nucleotide-binding protein-like 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03930","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase grn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.08c","secondary_identifiers":["UniProtKB:O74791"],"synonyms":[{"name":"GTPase in ribosomal export from the nucleolus protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GNL3","type":"exact"},{"name":"nuclear GTP-binding protein grn1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74791"}


id: GO:0016025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome endopeptidase regulator (obsolete GO:0016025)","synonyms":[{"name":"proteasome endopeptidase regulator","type":"exact"}],"termid":"GO:0016025"}


id: MONDO:0010013
data:
  {"annotated_genes":["SJAG_00339"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86704],"is_not":false,"summary":null,"term":"MONDO:0010013"}]},"cv_name":"mondo","definition":"Schneckenbecken dysplasia (or chondrodysplasia with snail-like pelvis) is a prenatally lethal spondylodysplastic dysplasia.","definition_xrefs":["Orphanet:3144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"severe spondylodysplastic dysplasia","termid":"MONDO:0800080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0005497"],"is_obsolete":false,"name":"schneckenbecken dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:169","ICD9:756.9","icd11.foundation:584032448","MEDGEN:98475","DOID:0050775","UMLS:C0432194","SCTID:254049009","OMIM:269250","MESH:C536637"],"synonyms":[{"name":"SHNKND","type":"related"},{"name":"SLC35D1-CDG","type":"exact"},{"name":"chondrodysplasia lethal neonatal with snail like pelvis","type":"related"},{"name":"chondrodysplasia with snail-like pelvis","type":"exact"},{"name":"chondrodysplasia, lethal neonatal, with snail-like pelvis","type":"related"},{"name":"schneckenbecken dysplasia","type":"exact"}],"termid":"MONDO:0010013","terms_by_termid":{"MONDO:0010013":null},"xrefs":{"Monarch":{"xref_id":"0010013"}}}


id: GO:0097396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-17 stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-17","synonyms":[{"name":"response to IL-17","type":"exact"}],"termid":"GO:0097396"}


id: FYPO:0005312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which establishment of mitotic sister chromatid cohesion is normal (i.e. indistinguishable from wild type). Establishment of mitotic sister chromatid cohesion is the process in which the sister chromatids of a replicated chromosome become joined along the entire length of the chromosome during S phase of the mitotic cell cycle.","definition_xrefs":["GO:0034087","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal establishment of mitotic sister chromatid cohesion","synonyms":[{"name":"normal establishment of mitotic chromosome cohesion","type":"exact"},{"name":"normal establishment of mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal establishment of sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005312"}


id: PBO:0054812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2225","termid":"PBO:0054812"}


id: PBO:0005542
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.7","termid":"PBO:0005542"}


id: GO:0008733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinose = L-ribulose.","definition_xrefs":["RHEA:14821","EC:5.3.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"L-arabinose isomerase activity","secondary_identifiers":["MetaCyc:ARABISOM-RXN","KEGG_REACTION:R01761"],"synonyms":[{"name":"L-arabinose aldose-ketose-isomerase activity","type":"related"},{"name":"L-arabinose ketol-isomerase activity","type":"related"}],"termid":"GO:0008733"}


id: PBO:0075941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 1","termid":"PBO:0075941"}


id: PBO:0002986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase (predicted)","termid":"PBO:0002986"}


id: GO:0051903
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106322"},{"annotations":[103274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106321"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione + NAD(P)+ = S-formylglutathione + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R07140","Reactome:R-HSA-5692237","UM-BBD_reactionID:r1146","KEGG_REACTION:R06983","MetaCyc:RXN-2962"],"synonyms":[{"name":"ADH3 activity","type":"narrow"},{"name":"FDH activity","type":"related"},{"name":"GD-FALDH activity","type":"related"},{"name":"GS-FDH activity","type":"related"},{"name":"NAD- and glutathione-dependent formaldehyde dehydrogenase activity","type":"related"},{"name":"NAD-dependent formaldehyde dehydrogenase activity","type":"related"},{"name":"NAD-linked formaldehyde dehydrogenase activity","type":"related"},{"name":"S-(hydroxymethyl)glutathione:NAD+ oxidoreductase activity","type":"related"},{"name":"chi-ADH activity","type":"narrow"},{"name":"class III alcohol dehydrogenase activity","type":"related"},{"name":"formic dehydrogenase activity","type":"related"},{"name":"glutathione-dependent formaldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0051903","terms_by_termid":{"GO:0106321":null,"GO:0106322":null}}


id: PBO:0060517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napsin B aspartic peptidase, pseudogene","termid":"PBO:0060517"}


id: PBO:0080598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 31","termid":"PBO:0080598"}


id: GO:0006493
data:
  {"annotated_genes":["SJAG_00598","SJAG_04906","SJAG_03150","SJAG_01021","SJAG_01264","SJAG_03149","SJAG_04316","SJAG_04095","SJAG_01491","SJAG_04053"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62825,74590,77401,79217,110500,110506,117847],"is_not":false,"summary":null,"term":"GO:0006493"},{"annotations":[105765,92833,101340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or via the phenol group of peptidyl-tyrosine, forming an O-glycan.","definition_xrefs":["ISBN:0879695595","GOC:pr","PMID:33775405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01491":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_04053":null,"SJAG_04095":null,"SJAG_04316":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein O-linked glycosylation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5173105","RESID:AA0153","RESID:AA0157","RESID:AA0212","RESID:AA0154","RESID:AA0155"],"synonyms":[{"name":"protein amino acid O-linked glycosylation","type":"exact"}],"termid":"GO:0006493","terms_by_termid":{"GO:0006493":null,"GO:0035269":null}}


id: GO:0006575
data:
  {"annotated_genes":["SJAG_03224","SJAG_02599","SJAG_03316","SJAG_00832","SJAG_04577","SJAG_04425","SJAG_02100","SJAG_04156","SJAG_00106","SJAG_01139","SJAG_03275","SJAG_01616","SJAG_00988","SJAG_04726","SJAG_03679","SJAG_01995","SJAG_01766","SJAG_05181","SJAG_03494","SJAG_01198","SJAG_01612","SJAG_02408","SJAG_04858","SJAG_01466","SJAG_03856","SJAG_01233","SJAG_02225","SJAG_01162","SJAG_03712","SJAG_00815","SJAG_03914","SJAG_00529","SJAG_05200","SJAG_01126","SJAG_00903","SJAG_01351","SJAG_03076"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108141,112205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[116844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[70191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000053"},{"annotations":[68140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[70827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046452"},{"annotations":[103417,111330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[108142,112206,105883,57114,60606,68745,104586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[70829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[72328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009396"},{"annotations":[78454,77125,57741,108230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[102057,76423,78367,73464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006751"},{"annotations":[99076,102587,78862,76869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006749"},{"annotations":[72036,77344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[66905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"},{"annotations":[74200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"},{"annotations":[101214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006658"},{"annotations":[76078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033528"},{"annotations":[103418,111331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"},{"annotations":[57112,60609,70828,79574,105884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[75640,104587,70586,61089,72327,76355,59459,71649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035999"},{"annotations":[72121,68141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving compounds derived from amino acids, organic acids containing one or more amino substituents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic 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process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"amino acid derivative metabolic process","type":"exact"},{"name":"cellular amino acid derivative metabolic process","type":"exact"},{"name":"cellular amino acid derivative metabolism","type":"exact"},{"name":"cellular modified amino acid metabolic process","type":"exact"},{"name":"cellular modified amino acid metabolism","type":"exact"},{"name":"modified amino acid metabolism","type":"exact"}],"termid":"GO:0006575","terms_by_termid":{"GO:0000053":null,"GO:0006658":null,"GO:0006659":null,"GO:0006660":null,"GO:0006749":null,"GO:0006750":null,"GO:0006751":null,"GO:0006761":null,"GO:0009257":null,"GO:0009396":null,"GO:0015940":null,"GO:0033528":null,"GO:0035999":null,"GO:0046452":null,"GO:0046654":null,"GO:0046655":null,"GO:0046656":null,"GO:0046901":null,"GO:0052699":null,"GO:1903257":null,"GO:1990181":null}}


id: PBO:0116406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exomer complex BRCT domain subunit Cfr1/Chs5","termid":"PBO:0116406"}


id: PATO:0000542
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000542 absolute photosensitivity value (obsolete PATO:0000542)","termid":"PATO:0000542"}


id: GO:0035018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the patterns of cell differentiation that will arise in the chitin-based adult cuticle. An example of this process is adult chitin-based cuticle pattern formation in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle pattern formation","termid":"GO:0035017"},{"relation_name":"part_of","term_name":"adult chitin-based cuticle development","termid":"GO:0008365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult chitin-based cuticle pattern formation","synonyms":[{"name":"adult cuticle pattern formation","type":"broad"}],"termid":"GO:0035018"}


id: PBO:0079320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 10","termid":"PBO:0079320"}


id: PBO:0069550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 821, pseudogene","termid":"PBO:0069550"}


id: MONDO:0011296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meckel syndrome in which the cause of the disease is a mutation in the TMEM216 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome, type 2","secondary_identifiers":["DOID:0070116","GARD:8743","OMIM:603194","UMLS:C1864148","MESH:C536131","MEDGEN:351059"],"synonyms":[{"name":"MKS2","type":"exact"},{"name":"Meckel syndrome 2","type":"related"},{"name":"Meckel syndrome caused by mutation in TMEM216","type":"exact"},{"name":"Meckel syndrome type 2","type":"related"},{"name":"Meckel syndrome, type 2","type":"exact"},{"name":"Meckel-Gruber syndrome, type 2","type":"exact"},{"name":"TMEM216 Meckel syndrome","type":"exact"}],"termid":"MONDO:0011296","xrefs":{"Monarch":{"xref_id":"0011296"}}}


id: MONDO:0015376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"first branchial cleft anomaly","secondary_identifiers":["UMLS:C3874320","MEDGEN:848144","SCTID:73371000119103","icd11.foundation:1956658224","GARD:19934","Orphanet:141013"],"synonyms":[{"name":"first branchial cleft cyst","type":"exact"},{"name":"first branchial cleft fistula","type":"exact"}],"termid":"MONDO:0015376","xrefs":{"Monarch":{"xref_id":"0015376"}}}


id: PBO:0047373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 4","termid":"PBO:0047373"}


id: GO:0097277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of urea at the level of the cell.","definition_xrefs":["PMID:12695560","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular urea homeostasis (obsolete GO:0097277)","termid":"GO:0097277"}


id: PBO:0076100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX5 divergent transcript","termid":"PBO:0076100"}


id: MONDO:0859156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"dysostosis multiplex, Ain-Naz type","secondary_identifiers":["MEDGEN:1780944","UMLS:C5444223","OMIM:619345"],"termid":"MONDO:0859156","xrefs":{"Monarch":{"xref_id":"0859156"}}}


id: GO:0097154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuroblast acquires the specialized structural and functional features of a GABAergic neuron.","definition_xrefs":["PMID:11517269","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"GABAergic neuron differentiation","termid":"GO:0097154"}


id: PBO:0076658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 20","termid":"PBO:0076658"}


id: GO:1900913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of olefin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"positively_regulates","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of olefin biosynthetic process","synonyms":[{"name":"activation of olefin anabolism","type":"narrow"},{"name":"activation of olefin biosynthesis","type":"narrow"},{"name":"activation of olefin biosynthetic process","type":"narrow"},{"name":"activation of olefin formation","type":"narrow"},{"name":"activation of olefin synthesis","type":"narrow"},{"name":"positive regulation of olefin anabolism","type":"related"},{"name":"positive regulation of olefin biosynthesis","type":"related"},{"name":"positive regulation of olefin formation","type":"related"},{"name":"positive regulation of olefin synthesis","type":"related"},{"name":"up regulation of olefin anabolism","type":"related"},{"name":"up regulation of olefin biosynthesis","type":"related"},{"name":"up regulation of olefin biosynthetic process","type":"exact"},{"name":"up regulation of olefin formation","type":"related"},{"name":"up regulation of olefin synthesis","type":"related"},{"name":"up-regulation of olefin anabolism","type":"related"},{"name":"up-regulation of olefin biosynthesis","type":"related"},{"name":"up-regulation of olefin biosynthetic process","type":"exact"},{"name":"up-regulation of olefin formation","type":"related"},{"name":"up-regulation of olefin synthesis","type":"related"},{"name":"upregulation of olefin anabolism","type":"related"},{"name":"upregulation of olefin biosynthesis","type":"related"},{"name":"upregulation of olefin biosynthetic process","type":"exact"},{"name":"upregulation of olefin formation","type":"related"},{"name":"upregulation of olefin synthesis","type":"related"}],"termid":"GO:1900913"}


id: GO:1903965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monounsaturated fatty acid.","definition_xrefs":["GO_REF:0000068","GOC:hjd","GOC:TermGenie","PMID:16443825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"monounsaturated fatty acid metabolic process","termid":"GO:1903964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"monounsaturated fatty acid catabolic process","synonyms":[{"name":"monounsaturated fatty acid breakdown","type":"exact"},{"name":"monounsaturated fatty acid catabolism","type":"exact"},{"name":"monounsaturated fatty acid degradation","type":"exact"}],"termid":"GO:1903965"}


id: GO:0032923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphonates, any organic compound containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Synthesis of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.","definition_xrefs":["GOC:js"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"organic phosphonate metabolic process","termid":"GO:0019634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"organic phosphonate biosynthetic process","synonyms":[{"name":"organophosphonate biosynthetic process","type":"related"}],"termid":"GO:0032923"}


id: MONDO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the vestibulocochlear nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant cranial nerve neoplasm","termid":"MONDO:0002433"},{"relation_name":"is_a","term_name":"auditory system cancer","termid":"MONDO:0004532"},{"relation_name":"is_a","term_name":"vestibulocochlear nerve neoplasm","termid":"MONDO:0021221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant neoplasm of acoustic nerve","secondary_identifiers":["NCIT:C4539","DOID:2814","UMLS:C0346331","MEDGEN:83418","SCTID:254980001"],"synonyms":[{"name":"cancer of the vestibulocochlear nerve","type":"exact"},{"name":"cancer of vestibulocochlear nerve","type":"exact"},{"name":"malignant acoustic nerve neoplasm","type":"exact"},{"name":"malignant acoustic nerve tumor","type":"exact"},{"name":"malignant acoustic nerve tumour","type":"exact"},{"name":"malignant eighth cranial nerve neoplasm","type":"exact"},{"name":"malignant eighth cranial nerve tumor","type":"exact"},{"name":"malignant eighth cranial nerve tumour","type":"exact"},{"name":"malignant neoplasm of eighth cranial nerve","type":"exact"},{"name":"malignant neoplasm of the acoustic nerve","type":"exact"},{"name":"malignant neoplasm of the eighth cranial nerve","type":"exact"},{"name":"malignant neoplasm of the vestibulocochlear nerve","type":"exact"},{"name":"malignant neoplasm of vestibulocochlear nerve","type":"exact"},{"name":"malignant tumor of acoustic nerve","type":"exact"},{"name":"malignant tumor of acoustic vestibular nerve","type":"exact"},{"name":"malignant tumor of eighth cranial nerve","type":"exact"},{"name":"malignant tumor of the acoustic nerve","type":"exact"},{"name":"malignant tumor of the eighth cranial nerve","type":"exact"},{"name":"malignant tumor of the vestibulocochlear nerve","type":"exact"},{"name":"malignant tumor of vestibulocochlear nerve","type":"exact"},{"name":"malignant tumour of acoustic nerve","type":"exact"},{"name":"malignant tumour of acoustic vestibular nerve","type":"exact"},{"name":"malignant tumour of eighth cranial nerve","type":"exact"},{"name":"malignant tumour of the acoustic nerve","type":"exact"},{"name":"malignant tumour of the eighth cranial nerve","type":"exact"},{"name":"malignant tumour of the vestibulocochlear nerve","type":"exact"},{"name":"malignant tumour of vestibulocochlear nerve","type":"exact"},{"name":"malignant vestibulocochlear nerve neoplasm","type":"exact"},{"name":"malignant vestibulocochlear nerve tumor","type":"exact"},{"name":"malignant vestibulocochlear nerve tumour","type":"exact"},{"name":"vestibulocochlear nerve cancer","type":"exact"}],"termid":"MONDO:0002432","xrefs":{"Monarch":{"xref_id":"0002432"}}}


id: FYPO:0002716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole fusion, the merging of two vacuole membranes to form a single vacuole, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0042144","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuole fusion during vegetative growth","synonyms":[{"name":"normal homotypic vacuole fusion during vegetative growth","type":"exact"},{"name":"normal vacuole fusion during mitotic cell cycle","type":"related"},{"name":"normal vacuole fusion, non-autophagic, during vegetative growth","type":"exact"}],"termid":"FYPO:0002716"}


id: MONDO:0014350
data:
  {"annotated_genes":["SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86203],"is_not":false,"summary":null,"term":"MONDO:0014350"}]},"cv_name":"mondo","definition":"Any Seckel syndrome in which the cause of the disease is a mutation in the DNA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Seckel syndrome","termid":"MONDO:0019342"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Seckel syndrome 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070009","OMIM:615807","UMLS:C3891452","MEDGEN:856014","GARD:16013"],"synonyms":[{"name":"DNA2 Seckel syndrome","type":"exact"},{"name":"SCKL8","type":"exact"},{"name":"Seckel syndrome 8","type":"exact"},{"name":"Seckel syndrome caused by mutation in DNA2","type":"exact"},{"name":"Seckel syndrome type 8","type":"exact"}],"termid":"MONDO:0014350","terms_by_termid":{"MONDO:0014350":null},"xrefs":{"Monarch":{"xref_id":"0014350"}}}


id: PBO:0060182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 3A, cell surface associated","termid":"PBO:0060182"}


id: PBO:0083165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps uncharacterized ORF YER085C","termid":"PBO:0083165"}


id: PBO:0012606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 7, Pre10 (predicted)","termid":"PBO:0012606"}


id: GO:1905553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood vessel branching.","definition_xrefs":["GOC:BHF_telomere","GOC:nc","GOC:TermGenie","PMID:23201774","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"branching involved in blood vessel morphogenesis","termid":"GO:0001569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood vessel branching","synonyms":[{"name":"regulation of branching involved in blood vessel morphogenesis","type":"exact"}],"termid":"GO:1905553"}


id: MONDO:0013992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"inherited obesity","termid":"MONDO:0019182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity due to leptin receptor gene deficiency","secondary_identifiers":["MEDGEN:767139","GARD:17083","icd11.foundation:997823205","NCIT:C120386","Orphanet:179494","UMLS:C3554225","OMIM:614963","NORD:109401"],"synonyms":[{"name":"LEPR Deficiency","type":"exact"},{"name":"leptin receptor deficiency","type":"related"},{"name":"obesity due to leptin receptor gene deficiency","type":"exact"},{"name":"obesity, morbid, due to leptin receptor deficiency","type":"exact"},{"name":"obesity, morbid, nonsyndromic 2","type":"related"}],"termid":"MONDO:0013992","xrefs":{"Monarch":{"xref_id":"0013992"}}}


id: PBO:0077963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 16-1","termid":"PBO:0077963"}


id: FYPO:0002521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population undergoes conjugation with wild type h- cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased conjugation frequency","termid":"FYPO:0000303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased frequency of conjugation with h- cells","synonyms":[{"name":"decreased conjugation with WT h- cells","type":"exact"},{"name":"decreased frequency of conjugation with h minus cells","type":"exact"},{"name":"decreased frequency of mating with h- cells","type":"exact"},{"name":"reduced frequency of conjugation with h- cells","type":"exact"}],"termid":"FYPO:0002521"}


id: PBO:0084070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase involved in initiation of Mitotic Exit Network (MEN); GTP-binding protein of the Ras superfamily; accumulates at daughter spindle pole body and activates MEN kinase cascade; controls actomyosin and septin dynamics during cytokinesis","termid":"PBO:0084070"}


id: MONDO:0011742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to, 7","secondary_identifiers":["OMIM:606875","UMLS:C1969836","MEDGEN:370761"],"synonyms":[{"name":"HSCR7","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, 7","type":"exact"}],"termid":"MONDO:0011742","xrefs":{"Monarch":{"xref_id":"0011742"}}}


id: MONDO:0004740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperlysinemia (obsolete MONDO:0004740)","termid":"MONDO:0004740","xrefs":{"Monarch":{"xref_id":"0004740"}}}


id: GO:0044015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2B L-lysine (position 12) = CoA + histone H2B N6-acetyl-L-lysine (position 12).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2B acetyltransferase activity","termid":"GO:0044013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016746","GO:0003824","GO:0016740","GO:0034212","GO:0003674"],"is_obsolete":false,"name":"histone H2BK12 acetyltransferase activity","synonyms":[{"name":"histone H2B-K12 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H2B-K12 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H2B-K12 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H2B-K12 specific)","type":"exact"}],"termid":"GO:0044015"}


id: GO:0018882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-camphor, a bicyclic monoterpene ketone which is one of the major components in the leaves of common sage. Camphor exists in two enantiomers, but the (+)-isomer is more widely distributed.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(+)-camphor metabolic process","synonyms":[{"name":"(+)-camphor metabolism","type":"exact"},{"name":"camphor metabolic process","type":"exact"},{"name":"camphor metabolism","type":"exact"}],"termid":"GO:0018882"}


id: PR:Q10132
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isopentenyl-diphosphate Delta-isomerase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02441","PANTHER:PTHR10885:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isopentenyl-diphosphate Delta-isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.15","secondary_identifiers":["UniProtKB:Q10132"],"synonyms":[{"name":"IPP isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IDI1","type":"exact"},{"name":"isopentenyl pyrophosphate isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10132"}


id: GO:0010359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anion channel activity.","definition_xrefs":["PMID:17319842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of anion channel activity","termid":"GO:0010359"}


id: PBO:0065484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 3","termid":"PBO:0065484"}


id: GO:0032139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a dinucleotide insertion or deletion.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA insertion or deletion binding","termid":"GO:0032135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"dinucleotide insertion or deletion binding","synonyms":[{"name":"dinucleotide insertion binding","type":"narrow"}],"termid":"GO:0032139"}


id: GO:0048579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces long-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.","definition_xrefs":["GOC:pj","ISBN:0697037754","ISBN:0709408862","ISBN:0582015952","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of long-day photoperiodism, flowering","termid":"GO:0048586"},{"relation_name":"negatively_regulates","term_name":"long-day photoperiodism, flowering","termid":"GO:0048574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of long-day photoperiodism, flowering","synonyms":[{"name":"down regulation of long-day photoperiodism, flowering","type":"exact"},{"name":"down-regulation of long-day photoperiodism, flowering","type":"exact"},{"name":"downregulation of long-day photoperiodism, flowering","type":"exact"},{"name":"inhibition of long-day photoperiodism, flowering","type":"narrow"}],"termid":"GO:0048579"}


id: PBO:0069962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1256, pseudogene","termid":"PBO:0069962"}


id: PBO:0041426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 48","termid":"PBO:0041426"}


id: PBO:0038820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 23","termid":"PBO:0038820"}


id: PBO:0087943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor eIF-5A; required for translation of proteins containing polyproline stretches, including Bni1p, and this leads to a requirement for mating projection formation; structural homolog of bacterial EF-P; undergoes an essential hypusination modification; HYP2 has a paralog, ANB1, that arose from the whole genome duplication; human EIF5A complements the inviability of the yeast hyp2 anb1 double null mutant","termid":"PBO:0087943"}


id: PBO:0017444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-produces","termid":"PBO:0017444"}


id: GO:0030019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Xaa, Lys-Xaa, but with more restricted specificity than trypsin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptase activity (obsolete GO:0030019)","synonyms":[{"name":"lung tryptase activity","type":"narrow"},{"name":"mast cell neutral proteinase activity","type":"related"},{"name":"mast cell protease II activity","type":"narrow"},{"name":"mast cell proteinase II","type":"related"},{"name":"mast cell serine proteinase II","type":"related"},{"name":"mast cell serine proteinase tryptase activity","type":"related"},{"name":"mast cell tryptase activity","type":"narrow"},{"name":"pituitary tryptase activity","type":"narrow"},{"name":"rat mast cell protease II","type":"related"},{"name":"skin tryptase activity","type":"narrow"},{"name":"tryptase M","type":"related"},{"name":"tryptase activity","type":"exact"}],"termid":"GO:0030019"}


id: GO:1903444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of brown fat cell differentiation.","definition_xrefs":["GOC:TermGenie","PMID:23977283","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fat cell differentiation","termid":"GO:0045599"},{"relation_name":"is_a","term_name":"regulation of brown fat cell differentiation","termid":"GO:0090335"},{"relation_name":"negatively_regulates","term_name":"brown fat cell differentiation","termid":"GO:0050873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of brown fat cell differentiation","synonyms":[{"name":"down regulation of brown adipocyte cell differentiation","type":"exact"},{"name":"down regulation of brown adipocyte differentiation","type":"exact"},{"name":"down regulation of brown fat cell differentiation","type":"exact"},{"name":"down-regulation of brown adipocyte cell differentiation","type":"exact"},{"name":"down-regulation of brown adipocyte differentiation","type":"exact"},{"name":"down-regulation of brown fat cell differentiation","type":"exact"},{"name":"downregulation of brown adipocyte cell differentiation","type":"exact"},{"name":"downregulation of brown adipocyte differentiation","type":"exact"},{"name":"downregulation of brown fat cell differentiation","type":"exact"},{"name":"inhibition of brown adipocyte cell differentiation","type":"narrow"},{"name":"inhibition of brown adipocyte differentiation","type":"narrow"},{"name":"inhibition of brown fat cell differentiation","type":"narrow"},{"name":"negative regulation of brown adipocyte cell differentiation","type":"exact"},{"name":"negative regulation of brown adipocyte differentiation","type":"exact"}],"termid":"GO:1903444"}


id: GO:0021618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the hypoglossal nerve is generated and organized. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"hypoglossal nerve development","termid":"GO:0021566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoglossal nerve morphogenesis","synonyms":[{"name":"CN XII morphogenesis","type":"related"}],"termid":"GO:0021618"}


id: MONDO:0017600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hairy Cell Leukemia variant (HCL-V) is defined as a rare and indolent form of small, mature, B-cell leukemia characterized by splenomegaly, an elevated white blood cell (WBC) count and hyper-cellular bone marrow. HCL-V is more aggressive and resistant to therapy than classical HCL (HCL-C).","definition_xrefs":["Orphanet:300878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy cell leukemia","termid":"MONDO:0018935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hairy cell leukemia variant","secondary_identifiers":["NCIT:C7401","GARD:21249","UMLS:C0349633","DOID:713","ICDO:9591/3","MedDRA:10019054","SCTID:277568007","MEDGEN:91160"],"synonyms":[{"name":"HCL-V","type":"exact"},{"name":"HCL-v","type":"exact"},{"name":"hairy cell leukemia variant","type":"exact"},{"name":"leukemic reticuloendotheliosis variant","type":"exact"},{"name":"prolymphocytic variant of HCL","type":"exact"},{"name":"prolymphocytic variant of hairy cell leukaemia","type":"exact"},{"name":"prolymphocytic variant of hairy cell leukemia","type":"exact"}],"termid":"MONDO:0017600","xrefs":{"Monarch":{"xref_id":"0017600"}}}


id: PBO:0079768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 pseudogene 1","termid":"PBO:0079768"}


id: GO:1905942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of growth cone in injured axon.","definition_xrefs":["GOC:TermGenie","PMID:19737525","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"regulates","term_name":"formation of growth cone in injured axon","termid":"GO:0048689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of formation of growth cone in injured axon","termid":"GO:1905942"}


id: PBO:0031531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_oxidoreductase_activity","termid":"PBO:0031531"}


id: GO:1990192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A decrease in the diameter of collecting lymphatic vessels.","definition_xrefs":["PMID:23322290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphatic vessel size","termid":"GO:1990186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collecting lymphatic vessel constriction","synonyms":[{"name":"lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1990192"}


id: PBO:0075272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 25","termid":"PBO:0075272"}


id: MONDO:1011735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermal allergy, non-human animal","secondary_identifiers":["OMIA:000268"],"termid":"MONDO:1011735","xrefs":{"Monarch":{"xref_id":"1011735"}}}


id: GO:0009358
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses polyphosphate kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"polyphosphate kinase complex","termid":"GO:0009358"}


id: SO:0001567
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base in the terminator codon is changed, but the terminator remains.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminator_codon_variant","termid":"SO:0001590"},{"relation_name":"is_a","term_name":"synonymous_variant","termid":"SO:0001819"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_retained_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:stop_retained_variant","type":"exact"},{"name":"VAAST:stop_retained","type":"exact"},{"name":"VAAST:stop_retained_variant","type":"exact"},{"name":"VEP:stop_retained_variant","type":"exact"},{"name":"snpEff:NON_SYNONYMOUS_STOP","type":"exact"},{"name":"snpEff:SYNONYMOUS_STOP","type":"exact"},{"name":"stop retained variant","type":"exact"}],"termid":"SO:0001567"}


id: PBO:0074155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E3","termid":"PBO:0074155"}


id: MONDO:0007891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial generalized lentiginosis is a rare, inherited, skin hyperpigmentation disorder characterized by widespread lentigines without associated noncutaneous abnormalities. Patients present multiple brown to dark brown, non-elevated macula of 0.2 to 1 cm in diameter, spread over the entire body, sometimes including palms or soles, but never oral mucosa.","definition_xrefs":["Orphanet:231040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial generalized lentiginosis","secondary_identifiers":["GARD:17158","MEDGEN:486897","OMIM:151001","MESH:C573023","UMLS:C3492944","SCTID:765195000"],"synonyms":[{"name":"familial lentigines profusa","type":"exact"},{"name":"familial multiple lentigines syndrome without systemic involvement","type":"exact"},{"name":"lentiginosis profusa","type":"related"},{"name":"lentiginosis, diffuse","type":"related"},{"name":"lentiginosis, generalised","type":"related"},{"name":"lentiginosis, generalized","type":"related"},{"name":"lentiginosis, inherited patterned","type":"related"}],"termid":"MONDO:0007891","xrefs":{"Monarch":{"xref_id":"0007891"}}}


id: FYPO:0000956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bismuth ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on bismuth","synonyms":[{"name":"normal cell population growth in presence of bismuth","type":"exact"},{"name":"normal cell population growth on bismuth","type":"exact"},{"name":"normal cellular response to bismuth","type":"related"},{"name":"normal growth on bismuth ions","type":"exact"},{"name":"normal vegetative cell population growth on bismuth","type":"exact"}],"termid":"FYPO:0000956"}


id: MONDO:0004813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pneumothorax in which air enters into the pleural cavity.","definition_xrefs":["DOID:9534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumothorax","termid":"MONDO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous pneumothorax","secondary_identifiers":["ICD9:011.73","ICD9:011.7","ICD9:011.70","ICD9:011.72","ICD9:011.76","MEDGEN:509067","UMLS:C0152600","ICD9:011.71","SCTID:29731002"],"termid":"MONDO:0004813","xrefs":{"Monarch":{"xref_id":"0004813"}}}


id: GO:1904749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to nucleolus.","definition_xrefs":["GOC:BHF","GOC:nc","GOC:TermGenie","PMID:24415760","GOC:BHF_telomere","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to nucleus","termid":"GO:1900180"},{"relation_name":"regulates","term_name":"protein localization to nucleolus","termid":"GO:1902570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to nucleolus","synonyms":[{"name":"regulation of protein localisation in nucleolus","type":"exact"},{"name":"regulation of protein localisation to nucleolus","type":"exact"},{"name":"regulation of protein localization in nucleolus","type":"exact"}],"termid":"GO:1904749"}


id: GO:1901394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transforming growth factor beta1 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transforming growth factor beta1 activation (obsolete GO:1901394)","synonyms":[{"name":"activation of L-TGF-beta 1 activation","type":"exact"},{"name":"activation of TGF-beta 1 activation","type":"exact"},{"name":"activation of TGFB1 activation","type":"exact"},{"name":"activation of TGFbeta 1 activation","type":"exact"},{"name":"activation of latent-TGF-beta1 activation","type":"exact"},{"name":"activation of transforming growth factor beta1 activation","type":"narrow"},{"name":"activation of transforming growth factor-beta1 activation","type":"exact"},{"name":"positive regulation of L-TGF-beta 1 activation","type":"exact"},{"name":"positive regulation of TGF-beta 1 activation","type":"exact"},{"name":"positive regulation of TGFB1 activation","type":"exact"},{"name":"positive regulation of TGFbeta 1 activation","type":"exact"},{"name":"positive regulation of latent-TGF-beta1 activation","type":"exact"},{"name":"positive regulation of transforming growth factor-beta1 activation","type":"exact"},{"name":"up regulation of L-TGF-beta 1 activation","type":"exact"},{"name":"up regulation of TGF-beta 1 activation","type":"exact"},{"name":"up regulation of TGFB1 activation","type":"exact"},{"name":"up regulation of TGFbeta 1 activation","type":"exact"},{"name":"up regulation of latent-TGF-beta1 activation","type":"exact"},{"name":"up regulation of transforming growth factor beta1 activation","type":"exact"},{"name":"up regulation of transforming growth factor-beta1 activation","type":"exact"},{"name":"up-regulation of L-TGF-beta 1 activation","type":"exact"},{"name":"up-regulation of TGF-beta 1 activation","type":"exact"},{"name":"up-regulation of TGFB1 activation","type":"exact"},{"name":"up-regulation of TGFbeta 1 activation","type":"exact"},{"name":"up-regulation of latent-TGF-beta1 activation","type":"exact"},{"name":"up-regulation of transforming growth factor beta1 activation","type":"exact"},{"name":"up-regulation of transforming growth factor-beta1 activation","type":"exact"},{"name":"upregulation of L-TGF-beta 1 activation","type":"exact"},{"name":"upregulation of TGF-beta 1 activation","type":"exact"},{"name":"upregulation of TGFB1 activation","type":"exact"},{"name":"upregulation of TGFbeta 1 activation","type":"exact"},{"name":"upregulation of latent-TGF-beta1 activation","type":"exact"},{"name":"upregulation of transforming growth factor beta1 activation","type":"exact"},{"name":"upregulation of transforming growth factor-beta1 activation","type":"exact"}],"termid":"GO:1901394"}


id: MONDO:0024308
data:
  {"annotated_genes":["SJAG_03785","SJAG_05213","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84970,84971,84972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009925"},{"annotations":[85684,85685,85686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008333"}]},"cv_name":"mondo","definition":"An inherited disorder that causes calcium and other minerals to accumulate in the elastic fibers of the skin, eyes, and blood vessels, and less frequently in other areas such as the digestive tract.","definition_xrefs":["GARD:0009643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"is_obsolete":false,"name":"pseudoxanthoma elasticum (inherited or acquired)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0033847","MEDGEN:18733","SCTID:252246005","ICD9:757.39","NANDO:1200643"],"synonyms":[{"name":"PXE","type":"exact"},{"name":"pseudoxanthoma elasticum","type":"exact"}],"termid":"MONDO:0024308","terms_by_termid":{"MONDO:0008333":null,"MONDO:0009925":null},"xrefs":{"Monarch":{"xref_id":"0024308"}}}


id: MONDO:0007316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arnold-Chiari malformation type I is a central nervous system malformation characterized by caudal displacement of the cerebellar tonsils exceeding 5mm below the foramen magnum with or without syringomyelia. Symptoms vary in onset and severity and include suboccipital headache, neck pain, vertigo, tinnitus, ocular symptoms (diplopia, blurred vision, photofobia, nystagmus), lower cranial nerve signs, cerebellar ataxia, and spasticity. Some affected individuals can be asymptomatic.","definition_xrefs":["Orphanet:268882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Chiari malformation","termid":"MONDO:0000115"},{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"Chiari malformation type I","secondary_identifiers":["icd11.foundation:1383121646","SCTID:253185002","OMIM:118420","MEDGEN:196689","UMLS:C0750929","GARD:9233","MedDRA:10056944"],"synonyms":[{"name":"Arnold-Chiari malformation type 1","type":"exact"},{"name":"Arnold-Chiari malformation type I","type":"exact"},{"name":"Chiari malformation type 1","type":"exact"},{"name":"Chiari malformation type 1 with syringomyelia","type":"related"},{"name":"Chiari malformation type I","type":"exact"},{"name":"Cm1","type":"related"},{"name":"Cm1 with syringomyelia","type":"related"}],"termid":"MONDO:0007316","xrefs":{"Monarch":{"xref_id":"0007316"}}}


id: PR:P0CT39
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-6 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.08","synonyms":[{"name":"Spom972h-Tf2-6","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT39"}


id: GO:0110161
data:
  {"annotated_genes":["SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111230],"is_not":false,"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic prophase (spindle phase one).","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic spindle organization","termid":"GO:0110028"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle formation (spindle phase one)","termid":"GO:0110159"},{"relation_name":"is_a","term_name":"positive regulation of spindle assembly","termid":"GO:1905832"},{"relation_name":"positively_regulates","term_name":"mitotic spindle formation (spindle phase one)","termid":"GO:0061804"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0000226","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic spindle formation (spindle phase one)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110161","terms_by_termid":{"GO:0110161":null}}


id: PBO:0069413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 674, pseudogene","termid":"PBO:0069413"}


id: PBO:0044393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 18","termid":"PBO:0044393"}


id: PBO:0016993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein; involved in phospholipid metabolism (predicted)","termid":"PBO:0016993"}


id: GO:0071778
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A SWI/SNF-type complex that directly interacts with the vitamin D receptor (VDR) through the Williams syndrome transcription factor (WSTF), and mediates the recruitment of unliganded VDR to VDR target sites in promoters. The WINAC complex contains at least 13 subunits, including WSTF, several SWI/SNF components, and DNA replication-related factors.","definition_xrefs":["PMID:12837248","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete WINAC complex (obsolete GO:0071778)","synonyms":[{"name":"WINAC complex","type":"exact"}],"termid":"GO:0071778"}


id: PBO:0052072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin catalytic subunit A1 like 1","termid":"PBO:0052072"}


id: GO:0033839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside = UDP + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucosyl-(1->2)-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"flavonol-3-O-glycoside glucosyltransferase activity","secondary_identifiers":["RHEA:23544","MetaCyc:2.4.1.240-RXN"],"synonyms":[{"name":"UDP-glucose:flavonol-3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside 2'''-O-beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0033839"}


id: PBO:0001242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0136 family protein","termid":"PBO:0001242"}


id: GO:0031413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates an organism's tendency or ability to rise or float in a fluid medium such as water or air, often through the use of stored gases.","definition_xrefs":["GOC:mah","PATO:0001420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of buoyancy","synonyms":[{"name":"buoyancy regulation","type":"exact"}],"termid":"GO:0031413"}


id: GO:0070360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of an organism, usually a bacterial cell, from one place to another within its host organism, by a process involving continuous polymerization of actin at one pole of the symbiont cell. Some bacteria use host actin for migration from cell to cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:15773977","PMID:26021574","PMID:15981456","GOC:mah","GOC:jl","PMID:27997855","PMID:35285700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization-dependent cell motility","termid":"GO:0070358"},{"relation_name":"is_a","term_name":"symbiont-mediated cell-to-cell migration in host","termid":"GO:0106259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated actin polymerization-dependent cell-to-cell migration in host","secondary_identifiers":["GO:0070359"],"synonyms":[{"name":"actin polymerization-dependent cell migration in host","type":"broad"},{"name":"actin polymerization-dependent cell motility involved in migration of symbiont in host","type":"related"},{"name":"actin polymerization-dependent cell-to-cell migration in host","type":"exact"},{"name":"migration of symbiont within host by polymerization of host actin","type":"related"}],"termid":"GO:0070360"}


id: FYPO:0007778
data:
  {"alleles_by_uniquename":{"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119068],"is_not":false,"summary":null,"term":"FYPO:0007778"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which hyphae form fewer branched filaments than normal.","definition_xrefs":["PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02013":null},"genotype_count":1,"genotypes_by_uniquename":{"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007773"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0007773","FYPO:0000002"],"is_obsolete":false,"name":"decreased hyphal branching","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02013"],"single_locus_genotype_uniquenames":["pyp1delta"],"synonyms":[{"name":"decreased number of branched filaments","type":"exact"}],"termid":"FYPO:0007778","terms_by_termid":{"FYECO:0000314":null,"FYPO:0007778":null,"FYPO_EXT:0000001":null}}


id: PBO:0056287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase endo-alpha like","termid":"PBO:0056287"}


id: MONDO:0012982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Episodic ataxia type 6 (EA6) is an exceedingly rare form of hereditary episodic ataxia with varying degrees of ataxia and associated findings including slurred speech, headache, confusion and hemiplegia.","definition_xrefs":["Orphanet:209967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"episodic ataxia type 6","secondary_identifiers":["GARD:17107","SCTID:718753002","MEDGEN:390739","MESH:C567207","OMIM:612656","UMLS:C2675211","icd11.foundation:1493336901","DOID:0050994"],"synonyms":[{"name":"EA6","type":"related"},{"name":"SLC1A3 hereditary episodic ataxia","type":"exact"},{"name":"episodic ataxia type 6","type":"exact"},{"name":"episodic ataxia, type 6","type":"related"},{"name":"hereditary episodic ataxia caused by mutation in SLC1A3","type":"exact"}],"termid":"MONDO:0012982","xrefs":{"Monarch":{"xref_id":"0012982"}}}


id: FYPO:0006298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of the 5.8S ribosomal RNA molecule is abnormal.","definition_xrefs":["GO:0000467","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"},{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"abnormal 5.8S rRNA 3'-end processing","synonyms":[{"name":"abnormal 5.8S rRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal 5.8S rRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"abnormal exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","type":"exact"}],"termid":"FYPO:0006298"}


id: PBO:0035715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_methylation_during_vegetative_growth","termid":"PBO:0035715"}


id: PBO:0046150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastase, neutrophil expressed","termid":"PBO:0046150"}


id: PBO:0043593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXIII alpha 1 chain","termid":"PBO:0043593"}


id: PATO:0000028
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000028 macromolecular composition (obsolete PATO:0000028)","termid":"PATO:0000028"}


id: MONDO:1012241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal dysplasia, non-human animal","termid":"MONDO:1011979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dysplasia, dog","secondary_identifiers":["OMIA:000868-9615"],"termid":"MONDO:1012241","xrefs":{"Monarch":{"xref_id":"1012241"}}}


id: GO:0036301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage colony-stimulating factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"macrophage colony-stimulating factor production","synonyms":[{"name":"M-CSF production","type":"exact"}],"termid":"GO:0036301"}


id: GO:0045685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glia cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glial cell differentiation","synonyms":[{"name":"regulation of glia cell differentiation","type":"exact"},{"name":"regulation of neuroglia differentiation","type":"exact"}],"termid":"GO:0045685"}


id: PBO:0092012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine (ucu), mitochondrial","termid":"PBO:0092012"}


id: PBO:0116642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF related protein 1","termid":"PBO:0116642"}


id: GO:0052507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of symbiont jasmonic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway (obsolete GO:0052507)","synonyms":[{"name":"activation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"activation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052507"}


id: PBO:0035956
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_methylation_during_vegetative_growth","termid":"PBO:0035956"}


id: PBO:0027625
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0027625"}


id: PBO:0044277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 1","termid":"PBO:0044277"}


id: PBO:0056595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase 1B","termid":"PBO:0056595"}


id: MONDO:0012290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CEDNIK syndrome is a neurocutaneaous syndrome characterized by severe developmental abnormalities of the nervous system and aberrant differentiation of the epidermis.","definition_xrefs":["Orphanet:66631"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"CEDNIK syndrome","secondary_identifiers":["OMIM:609528","UMLS:C1836033","GARD:9940","DOID:0060337","SCTID:722385008","MEDGEN:332113","MESH:C537943"],"synonyms":[{"name":"CEDNIK syndrome","type":"exact"},{"name":"cerebral dysgenesis, neuropathy, ichthyosis and keratoderma syndrome","type":"exact"},{"name":"cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome","type":"related"},{"name":"cerebral dysgenesis-neuropathy-ichthyosis-palmoplantar keratoderma syndrome","type":"exact"}],"termid":"MONDO:0012290","xrefs":{"Monarch":{"xref_id":"0012290"}}}


id: PBO:0064972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 28, pseudogene","termid":"PBO:0064972"}


id: PBO:0041057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 8","termid":"PBO:0041057"}


id: GO:0061932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of erythrocyte enucleation.","definition_xrefs":["PMID:25241935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of erythrocyte enucleation","termid":"GO:0061930"},{"relation_name":"is_a","term_name":"negative regulation of cell maturation","termid":"GO:1903430"},{"relation_name":"negatively_regulates","term_name":"erythrocyte enucleation","termid":"GO:0043131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte enucleation","termid":"GO:0061932"}


id: PBO:0002605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA nucleotidyltransferase (predicted)","termid":"PBO:0002605"}


id: PBO:0071646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 10","termid":"PBO:0071646"}


id: GO:0005766
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lysosome before it has fused with a vesicle or vacuole.","definition_xrefs":["ISBN:0815316194","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"primary lysosome","secondary_identifiers":["NIF_Subcellular:sao1140587416"],"termid":"GO:0005766"}


id: GO:0140608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a cysteine-type endopeptidase.","definition_xrefs":["PMID:32558991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activator activity","termid":"GO:0061133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"cysteine-type endopeptidase activator activity","synonyms":[{"name":"caspase activator activator activity","type":"narrow"}],"termid":"GO:0140608"}


id: PBO:0055862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRP8 divergent transcript","termid":"PBO:0055862"}


id: PBO:0079949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 3","termid":"PBO:0079949"}


id: MONDO:0023045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia arthrogryposis diabetes mellitus","secondary_identifiers":["GARD:2042"],"termid":"MONDO:0023045","xrefs":{"Monarch":{"xref_id":"0023045"}}}


id: GO:0045065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a cytotoxic T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytotoxic T cell differentiation","synonyms":[{"name":"cytotoxic T cell development","type":"related"},{"name":"cytotoxic T lymphocyte selection","type":"exact"},{"name":"cytotoxic T-cell selection","type":"exact"},{"name":"cytotoxic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045065"}


id: PBO:0086653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; YOR292C is not an essential gene","termid":"PBO:0086653"}


id: GO:0004896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a cytokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"cytokine receptor activity","secondary_identifiers":["GO:0004907"],"synonyms":[{"name":"IL receptor","type":"narrow"},{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor activity","type":"related"},{"name":"interleukin receptor activity","type":"narrow"}],"termid":"GO:0004896"}


id: PBO:0064391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 13","termid":"PBO:0064391"}


id: GO:1901733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of quercetin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid catabolic process","termid":"GO:0046275"},{"relation_name":"is_a","term_name":"quercetin metabolic process","termid":"GO:1901732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin catabolic process","synonyms":[{"name":"quercetin breakdown","type":"exact"},{"name":"quercetin catabolism","type":"exact"},{"name":"quercetin degradation","type":"exact"}],"termid":"GO:1901733"}


id: PBO:0056418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myristoylated alanine rich protein kinase C substrate","termid":"PBO:0056418"}


id: GO:0061723
data:
  {"annotated_genes":["SJAG_04963","SJAG_01561","SJAG_00115","SJAG_03851","SJAG_06309","SJAG_01783"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71617,71880,72848,73267,78569,79602],"is_not":false,"summary":null,"term":"GO:0061723"}]},"cv_name":"biological_process","definition":"The selective degradation of glycogen by macroautophagy.","definition_xrefs":["GOC:autophagy","PMID:21893048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen catabolic process","termid":"GO:0005980"},{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_03851":null,"SJAG_04963":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006914","GO:0006091","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glycophagy","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0061723","terms_by_termid":{"GO:0061723":null}}


id: PBO:0087363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific enzyme required for spore wall maturation; involved in the production of a soluble LL-dityrosine-containing precursor of the spore wall; transcripts accumulate at the time of prospore enclosure","termid":"PBO:0087363"}


id: PBO:0055890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 9","termid":"PBO:0055890"}


id: PR:Q9USJ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsg1 gene.","definition_xrefs":["UniProtKB:Q9USJ8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD kinase subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.08","synonyms":[{"name":"CTD kinase subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTDK-I gamma subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsg1","type":"exact"}],"termid":"PR:Q9USJ8"}


id: PBO:0088478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid separation inhibitor, securin","termid":"PBO:0088478"}


id: PBO:0040610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR/IMD domain containing adaptor protein 2","termid":"PBO:0040610"}


id: FYPO:0007770
data:
  {"alleles_by_uniquename":{"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119240],"is_not":false,"summary":null,"term":"FYPO:0007770"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery persists after the onset of mitosis. Normally, telomeres are maintained at the nuclear periphery during interphase and released during mitosis.","definition_xrefs":["PomBase:mah","PMID:32109380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere tethering at nuclear periphery during vegetative growth","termid":"FYPO:0001515"},{"relation_name":"is_a","term_name":"increased heterochromatin tethering at nuclear periphery during mitosis","termid":"FYPO:0007769"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased telomere tethering at nuclear periphery during mitosis","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta"],"synonyms":[{"name":"increased telomere anchoring at nuclear periphery during mitosis","type":"exact"},{"name":"increased telomere tethering at nuclear periphery during mitosis during mitotic cell cycle","type":"related"},{"name":"increased telomere tethering at nuclear periphery during mitosis during vegetative growth","type":"exact"},{"name":"increased telomere tethering at nuclear periphery during mitotic M phase","type":"related"},{"name":"increased telomere tethering at nuclear periphery during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007770","terms_by_termid":{"FYPO:0007770":null,"FYPO_EXT:0000001":null}}


id: FYPO:0006891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal inositol hexakisphosphate kinase activity","termid":"FYPO:0006891"}


id: PBO:0058267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4645","termid":"PBO:0058267"}


id: PBO:0043141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 9","termid":"PBO:0043141"}


id: MONDO:1011193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis, non-human animal","termid":"MONDO:1010305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniosynostosis, rabbit","secondary_identifiers":["OMIA:001224-9986"],"termid":"MONDO:1011193","xrefs":{"Monarch":{"xref_id":"1011193"}}}


id: PBO:0074290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 5","termid":"PBO:0074290"}


id: PBO:0063030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAIP1 pseudogene 2","termid":"PBO:0063030"}


id: PBO:0067988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 290","termid":"PBO:0067988"}


id: PBO:0078129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 11 (pseudogene)","termid":"PBO:0078129"}


id: PBO:0001767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spo12 family protein","termid":"PBO:0001767"}


id: PBO:0088984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, sterol regulatory element binding protein Sre1","termid":"PBO:0088984"}


id: PATO:0002629
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is characterized by being very severe.","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profound intensity","termid":"PATO:0002629"}


id: GO:0007202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme phospolipase C as the result of The series of molecular signals generated as a consequence of a G protein-coupled receptor binding to its physiological ligand.","definition_xrefs":["GOC:tb","GOC:dph","PMID:8280098","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of phospholipase C activity (obsolete GO:0007202)","synonyms":[{"name":"phospholipase C activation","type":"exact"}],"termid":"GO:0007202"}


id: PBO:0075241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 11","termid":"PBO:0075241"}


id: PBO:0084622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine-R-sulfoxide reductase; reduces the R enantiomer of free Met-SO, in contrast to Ycl033Cp which reduces Met-R-SO in a peptide linkage; has a role in protection against oxidative stress; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0084622"}


id: GO:0052127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement on or near host (obsolete GO:0052127)","termid":"GO:0052127"}


id: MONDO:0038268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune neurological channelopathy (obsolete MONDO:0038268)","secondary_identifiers":["Orphanet:98750"],"termid":"MONDO:0038268","xrefs":{"Monarch":{"xref_id":"0038268"}}}


id: PBO:0083276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; deletion mutation blocks replication of Brome mosaic virus in S. cerevisiae, but this is likely due to effects on the overlapping gene SCS2","termid":"PBO:0083276"}


id: PBO:0041593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 5B","termid":"PBO:0041593"}


id: PBO:0063826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired like homeobox 2A","termid":"PBO:0063826"}


id: GO:0030792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + methylarsonite = S-adenosyl-L-homocysteine + dimethylarsinate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete methylarsonite methyltransferase activity (obsolete GO:0030792)","termid":"GO:0030792"}


id: PBO:0060961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor related to kappaB binding protein","termid":"PBO:0060961"}


id: MOD:00400
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group, with both a gain of oxygen and loss of a nitrogen and a hydrogen.","definition_xrefs":["Unimod:7","DeltaMass:32","OMSSA:4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deamidated residue","synonyms":[{"name":"Deamidated","type":"related"},{"name":"Deamidation","type":"related"},{"name":"Deamidation of Asparagine and Glutamine to Aspartate and Glutamate","type":"exact"},{"name":"dNRes","type":"exact"},{"name":"deamidationkq","type":"exact"}],"termid":"MOD:00400"}


id: GO:0090052
data:
  {"annotated_genes":["SJAG_01599","SJAG_03624","SJAG_00142"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96984,100103],"is_not":false,"summary":null,"term":"GO:0090052"},{"annotations":[90979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heterochromatin formation at the centromere. Chromatin silencing at the centromere is the repression of transcription of centromeric DNA by altering the structure of chromatin.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"regulates","term_name":"pericentric heterochromatin formation","termid":"GO:0031508"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01599":null,"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"regulation of pericentric heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromatin silencing at centromere","type":"exact"},{"name":"regulation of pericentric heterochromatin assembly","type":"exact"}],"termid":"GO:0090052","terms_by_termid":{"GO:0090052":null,"GO:0090053":null}}


id: PR:P50531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint protein RAD17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12172:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint protein rad17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.13","secondary_identifiers":["UniProtKB:P50531"],"synonyms":[{"name":"SPAC14C4.13","type":"related"},{"name":"Spom972h-RAD17","type":"exact"}],"termid":"PR:P50531"}


id: PR:Q9USK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USK4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.14","synonyms":[{"name":"Spom972h-cwf20","type":"exact"},{"name":"complexed with cdc5 protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USK4"}


id: PBO:0091317
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana AtSGP2","termid":"PBO:0091317"}


id: GO:0045101
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Glial fibrillary acidic protein forms filaments in the glial cells that surround neurons and in astrocytes.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete glial fibrillary acidic protein (obsolete GO:0045101)","synonyms":[{"name":"GFAP","type":"exact"},{"name":"glial fibrillary acidic protein","type":"exact"}],"termid":"GO:0045101"}


id: PBO:0026768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_uracil_import","termid":"PBO:0026768"}


id: PBO:0034526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_recombination_at_hotspot","termid":"PBO:0034526"}


id: PBO:0061361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 21","termid":"PBO:0061361"}


id: PBO:0067220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 288, pseudogene","termid":"PBO:0067220"}


id: MONDO:0800331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hyperglycinemia, transient neonatal","secondary_identifiers":["UMLS:C0268560","MEDGEN:82818"],"synonyms":[{"name":"TNH","type":"exact"}],"termid":"MONDO:0800331","xrefs":{"Monarch":{"xref_id":"0800331"}}}


id: GO:0043373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature T cell becomes committed to becoming a CD4-positive, alpha-beta T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell lineage commitment","termid":"GO:0002363"},{"relation_name":"is_a","term_name":"CD4-positive or CD8-positive, alpha-beta T cell lineage commitment","termid":"GO:0043369"},{"relation_name":"part_of","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell lineage commitment","synonyms":[{"name":"CD4-positive, alpha-beta T lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive, alpha-beta T-cell lineage commitment","type":"exact"},{"name":"CD4-positive, alpha-beta T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0043373"}


id: PBO:0006184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localizes","termid":"PBO:0006184"}


id: MONDO:0100390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly der12p. (A cytogenetic abnormality involving the rearrangement of two or more other chromosomes with the short arm of chromosome 12 (12p).)","definition_xrefs":["NCIT:C173542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, der12p","synonyms":[{"name":"AML, der(12p)","type":"exact"},{"name":"AML, der12p","type":"exact"}],"termid":"MONDO:0100390","xrefs":{"Monarch":{"xref_id":"0100390"}}}


id: GO:0090728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases brood size. Brood size is the number of progeny that survive embryogenesis and are cared for at one time.","definition_xrefs":["GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of brood size","termid":"GO:0090728"}


id: PBO:0063252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha constant","termid":"PBO:0063252"}


id: MONDO:0014188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0014188 (obsolete MONDO:0014188)","termid":"MONDO:0014188","xrefs":{"Monarch":{"xref_id":"0014188"}}}


id: MONDO:1011106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any polycystic kidney disease that occurs in pigs due to a mutation in the PKD2 gene created using gene editing.","definition_xrefs":["OMIA:002525-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, pig","termid":"MONDO:1011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, PKD2-related, pig","synonyms":[{"name":"polycystic kidney disease-2, pig","type":"related"}],"termid":"MONDO:1011106","xrefs":{"Monarch":{"xref_id":"1011106"}}}


id: PBO:0035975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_dNTP_level","termid":"PBO:0035975"}


id: PBO:0114218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis RNA-binding protein Nop8","termid":"PBO:0114218"}


id: MONDO:0003633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term describing a malignant soft tissue tumor which consists of two or more mesenchymal lines of differentiation, excluding a fibroblastic line of differentiation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"mesenchymoma","termid":"MONDO:0006854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mesenchymoma","secondary_identifiers":["MEDGEN:87252","ICDO:8990/3","UMLS:C0334492","NCIT:C4268","DOID:5758"],"synonyms":[{"name":"mesenchymoma, malignant","type":"exact"},{"name":"mesenchymoma, malignant (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003633","xrefs":{"Monarch":{"xref_id":"0003633"}}}


id: PBO:0027525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ribosomal_S6_protein_phosphorylation","termid":"PBO:0027525"}


id: PBO:0017860
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of sucrose to glucose is 3.1 (uM min-1 ml-2)","termid":"PBO:0017860"}


id: PBO:0044686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDN and PRKAG1 antisense RNA 1","termid":"PBO:0044686"}


id: GO:0120159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in rRNA = a pseudouridine in rRNA. Conversion of uridine in an rRNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["PMID:28432181","RHEA:54568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthase activity","termid":"GO:0009982"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}


id: PBO:0073945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 19 member 3","termid":"PBO:0073945"}


id: PBO:0110488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor kinase PRP4K","termid":"PBO:0110488"}


id: MONDO:0007001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal protrusion of one or more of the leaflets of tricuspid valve into the right atrium during systole. This allows the backflow of blood into right atrium leading to tricuspid valve insufficiency; systolic murmurs. Its most common cause is not primary valve abnormality but rather the dilation of the right ventricle and the tricuspid annulus.","definition_xrefs":["MESH:D014263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"},{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"tricuspid valve prolapse","secondary_identifiers":["icd11.foundation:973833808","UMLS:C0040962","EFO:1001218","MedDRA:10066862","HP:0001704","Orphanet:95458","MEDGEN:11912","SCTID:253383003","DOID:5644"],"synonyms":[{"name":"tricuspid valve prolapse","type":"exact"},{"name":"tricuspid valve prolapse (disease)","type":"exact"}],"termid":"MONDO:0007001","xrefs":{"Monarch":{"xref_id":"0007001"}}}


id: FYPO:0005324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of cyclobutane pyrimidine dimers by error-free translesion synthesis occurs to a lower extent than normal.","definition_xrefs":["PMID:20453833","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-free translesion synthesis","termid":"FYPO:0005323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0001320","FYPO:0001985","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"decreased error-free translesion synthesis of cyclobutane pyrimidine dimers","synonyms":[{"name":"decreased error-free translesion synthesis across TT-CPD","type":"exact"},{"name":"decreased error-free translesion synthesis of cyclobutane pyrimidine dimers during mitotic cell cycle","type":"related"},{"name":"decreased error-free translesion synthesis of cyclobutane pyrimidine dimers during vegetative growth","type":"exact"}],"termid":"FYPO:0005324"}


id: MONDO:0004113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete HCL-v (obsolete MONDO:0004113)","termid":"MONDO:0004113","xrefs":{"Monarch":{"xref_id":"0004113"}}}


id: MOD:00139
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N2-succinyl-L-tryptophan.","definition_xrefs":["PubMed:8471040","PubMed:11857757","Unimod:64#N-term","RESID:AA0130","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2-succinyl-L-tryptophan","synonyms":[{"name":"(2S)-2-(3-carboxypropanoyl)amino-3-(1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"(2S)-2-amino-(6,7-dihydro-6,7-dioxo-1H-indole)-3-propanoic acid","type":"exact"},{"name":"MOD_RES N2-succinyltryptophan","type":"exact"},{"name":"N2-succinyl-L-tryptophan","type":"exact"},{"name":"Succinic anhydride labeling reagent light form (N-term)","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:00139"}


