# terms

id: GO:0097085
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An interferon regulatory factor complex that consists of a heterodimer of interferon regulatory factor 3 and interferon regulatory factor 5.","definition_xrefs":["GOC:cna","PMID:12138184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon regulatory factor complex","termid":"GO:0097071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interferon regulatory factor 3-interferon regulatory factor 5 complex","synonyms":[{"name":"IRF3:IRF5 complex","type":"exact"}],"termid":"GO:0097085"}


id: GO:0106357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + sn-glycerol 1-phosphate = dihydroxyacetone phosphate + H+ + NADH.","definition_xrefs":["RHEA:21412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-1-phosphate dehydrogenase [NAD(P)+] activity","termid":"GO:0050492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glycerol-1-phosphate dehydrogenase (NAD+) activity","synonyms":[{"name":"glycerol-1-phosphate dehydrogenase [NAD+] activity","type":"exact"}],"termid":"GO:0106357"}


id: GO:0061567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into dCMP, deoxycytidine monophosphate, to produce dCDP. Addition of two phosphate groups produces dCTP.","definition_xrefs":["GOC:dph","PMID:23416111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dCMP phosphorylation","termid":"GO:0061567"}


id: PBO:0058589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6722","termid":"PBO:0058589"}


id: PBO:0063519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal kinase","termid":"PBO:0063519"}


id: GO:0008399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of naphthalene to naphthalene 1,2-oxide.","definition_xrefs":["PMID:1742282","PMID:1981702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"naphthalene hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP2F2","type":"narrow"}],"termid":"GO:0008399"}


id: PBO:0068903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 145, pseudogene","termid":"PBO:0068903"}


id: GO:0102252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: n H2O + a cellodextrin = n beta-cellobiose, releasing cellobiose from the reducing ends of the chains.","definition_xrefs":["EC:3.2.1.176","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"cellulose 1,4-beta-cellobiosidase activity (reducing end)","secondary_identifiers":["MetaCyc:RXN-12420"],"termid":"GO:0102252"}


id: GO:0050660
data:
  {"annotated_genes":["SJAG_04042","SJAG_02489","SJAG_03240","SJAG_00972","SJAG_04032","SJAG_03290","SJAG_03236","SJAG_00370","SJAG_04270","SJAG_02827","SJAG_03712","SJAG_04743","SJAG_04000","SJAG_01041","SJAG_00265","SJAG_01063","SJAG_01466","SJAG_03804","SJAG_02599","SJAG_03985","SJAG_01903","SJAG_04367","SJAG_00235","SJAG_02496","SJAG_01693","SJAG_00174","SJAG_04459","SJAG_04054","SJAG_01162","SJAG_04608","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59563,60562,62408,64737,65584,65747,71473,74337,75822,75913,76132,76188,76999,78128,78864,78869,93907,112588,118574],"is_not":false,"summary":null,"term":"GO:0050660"},{"annotations":[71650,68809,64355,109475,70007,59283,60623,69416,70587,76003,112804,69434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071949"}]},"cv_name":"molecular_function","definition":"Binding to FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.","definition_xrefs":["ISBN:0198506732","GOC:ai","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_00235":null,"SJAG_00265":null,"SJAG_00370":null,"SJAG_00972":null,"SJAG_01041":null,"SJAG_01063":null,"SJAG_01162":null,"SJAG_01466":null,"SJAG_01671":null,"SJAG_01693":null,"SJAG_01903":null,"SJAG_02489":null,"SJAG_02496":null,"SJAG_02599":null,"SJAG_02827":null,"SJAG_03236":null,"SJAG_03240":null,"SJAG_03290":null,"SJAG_03712":null,"SJAG_03804":null,"SJAG_03985":null,"SJAG_04000":null,"SJAG_04032":null,"SJAG_04042":null,"SJAG_04054":null,"SJAG_04270":null,"SJAG_04367":null,"SJAG_04459":null,"SJAG_04608":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"flavin adenine dinucleotide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"FAD or FADH2 binding","type":"exact"},{"name":"flavine-adenine dinucleotide binding","type":"exact"}],"termid":"GO:0050660","terms_by_termid":{"GO:0050660":null,"GO:0071949":null}}


id: GO:0031121
data:
  {"annotated_genes":["SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031025"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins at the midpoint of a cell.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"equatorial microtubule organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"equatorial microtubule organisation","type":"exact"},{"name":"equatorial microtubule organization and biogenesis","type":"related"}],"termid":"GO:0031121","terms_by_termid":{"GO:0031025":null}}


id: PBO:0044771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 53","termid":"PBO:0044771"}


id: GO:0004591
data:
  {"annotated_genes":["SJAG_02464"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70100],"is_not":false,"summary":null,"term":"GO:0004591"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + lipoamide + H+ = S-succinyldihydrolipoamide + CO2.","definition_xrefs":["EC:1.2.4.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor","termid":"GO:0016624"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxoglutarate dehydrogenase (succinyl-transferring) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-71401","RHEA:12188","MetaCyc:2OXOGLUTDECARB-RXN"],"synonyms":[{"name":"2-ketoglutarate dehydrogenase activity","type":"related"},{"name":"2-oxoglutarate dehydrogenase activity","type":"related"},{"name":"2-oxoglutarate: lipoate oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate:dihydrolipoyllysine-residue succinyltransferase-lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-succinylating)","type":"related"},{"name":"2-oxoglutarate:lipoamide 2-oxidoreductase (decarboxylating and acceptor-succinylating) activity","type":"related"},{"name":"AKGDH activity","type":"related"},{"name":"OGDC activity","type":"related"},{"name":"alpha-ketoglutarate dehydrogenase activity","type":"related"},{"name":"alpha-ketoglutaric acid dehydrogenase activity","type":"related"},{"name":"alpha-ketoglutaric dehydrogenase activity","type":"related"},{"name":"alpha-oxoglutarate dehydrogenase activity","type":"related"},{"name":"ketoglutaric dehydrogenase activity","type":"related"},{"name":"oxoglutarate decarboxylase activity","type":"related"},{"name":"oxoglutarate dehydrogenase (lipoamide) activity","type":"exact"},{"name":"oxoglutarate dehydrogenase activity","type":"related"}],"termid":"GO:0004591","terms_by_termid":{"GO:0004591":null}}


id: GO:0035651
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an AP-3 adaptor complex. The AP-3 adaptor complex is a heterotetrameric AP-type membrane coat adaptor complex that consists of beta3, delta, mu3 and sigma3 subunits and is found associated with endosomal membranes. In at least humans, the AP-3 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different genes (beta3A and beta3B, mu3A and mu3B, and sigma3A and sigma3B).","definition_xrefs":["PMID:21097499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"AP-3 adaptor complex binding","termid":"GO:0035651"}


id: PBO:0081082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC12 divergent transcript","termid":"PBO:0081082"}


id: PR:Q9USK6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cbp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USK6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBP3-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.17","synonyms":[{"name":"Spom972h-cbp3","type":"exact"}],"termid":"PR:Q9USK6"}


id: PBO:0073931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 4","termid":"PBO:0073931"}


id: PBO:0072607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 2","termid":"PBO:0072607"}


id: GO:0042199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanuric acid, a suspected gastrointestinal or liver toxicant, and a potential degradation product of triazine herbicides, such as atrazine and simazine. It is widely used for the stabilization of available chlorine in swimming pool water and is also the starting compound for the synthesis of many organic derivatives.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"s-triazine compound metabolic process","termid":"GO:0018965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanuric acid metabolic process","synonyms":[{"name":"cyanuric acid metabolism","type":"exact"}],"termid":"GO:0042199"}


id: PBO:0086047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in vacuolar protein sorting; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0086047"}


id: PATO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The temporal relation between the start of the process with respect to a reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"onset quality","termid":"PATO:0002325"}


id: FYPO:0004603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide and is elongated.","definition_xrefs":["PMID:7957061","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, elongated cell","synonyms":[{"name":"inviable following spore germination, without cell division, elongated cell","type":"exact"},{"name":"inviable germinated spore, without cell division, elongated cell","type":"exact"},{"name":"lethal after spore germination, without cell division, elongated cell","type":"exact"}],"termid":"FYPO:0004603"}


id: FYECO:0000307
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a cutin-1 was added to the medium or assay buffer in excess compared to standard medium or assay buffers. Cutin-1 targets the beta-subunit of fatty acid synthase.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cutin-1","termid":"FYECO:0000307"}


id: MONDO:1011407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nonspherocytic hemolytic anemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"anemia, non-human animal","termid":"MONDO:1012981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonspherocytic hemolytic anemia, non-human animal","secondary_identifiers":["OMIA:000433"],"termid":"MONDO:1011407","xrefs":{"Monarch":{"xref_id":"1011407"}}}


id: PBO:0075359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 1","termid":"PBO:0075359"}


id: MONDO:0011507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, congenital autoimmune","secondary_identifiers":["MESH:C565730","UMLS:C1857958","MEDGEN:347586","OMIM:605026"],"synonyms":[{"name":"diabetes mellitus, congenital autoimmune","type":"exact"}],"termid":"MONDO:0011507","xrefs":{"Monarch":{"xref_id":"0011507"}}}


id: PBO:0079967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 5","termid":"PBO:0079967"}


id: PBO:0050472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A cluster","termid":"PBO:0050472"}


id: GO:0061184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of embryonic development","termid":"GO:0040019"},{"relation_name":"is_a","term_name":"regulation of dermatome development","termid":"GO:0061183"},{"relation_name":"positively_regulates","term_name":"dermatome development","termid":"GO:0061054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dermatome development","termid":"GO:0061184"}


id: FYPO:0005060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break resection is normal (i.e. indistinguishable from wild type). Meiotic DNA double-strand break resection is the process by which long-tract single-stranded 3'-end DNA is generated by removal of bases from a 5' end from which SPO11/Rec12-oligonucleotide complexes have been removed.","definition_xrefs":["GO:1990899","PomBase:mah","PMID:26130711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic DNA double-strand break resection","synonyms":[{"name":"normal meiotic DNA double-strand break resectioning","type":"exact"}],"termid":"FYPO:0005060"}


id: MONDO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm morphologically characterized by the presence of a villous architectural pattern. Most often it occurs in the large intestine, small intestine, and the stomach in which the neoplastic epithelial cells show dysplastic features. It may also arise in the urinary bladder, urethra, and vagina.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"villous adenoma","secondary_identifiers":["ICDO:8261/0","MESH:D018253","NCIT:C7399","DOID:0050869","MEDGEN:60206","UMLS:C0206674"],"synonyms":[{"name":"villous adenoma","type":"exact"}],"termid":"MONDO:0000502","xrefs":{"Monarch":{"xref_id":"0000502"}}}


id: PBO:0047679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLNB antisense RNA 1","termid":"PBO:0047679"}


id: PBO:0069862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1149, pseudogene","termid":"PBO:0069862"}


id: FYPO:0002260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which L-glutamate import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal glutamate import","synonyms":[{"name":"normal L-glutamate import across plasma membrane","type":"exact"},{"name":"normal L-glutamic acid import","type":"exact"},{"name":"normal glutamate import during mitotic cell cycle","type":"related"},{"name":"normal glutamate import during vegetative growth","type":"exact"},{"name":"normal glutamate import into cell","type":"exact"},{"name":"normal glutamate uptake","type":"exact"},{"name":"normal glutamic acid import","type":"exact"}],"termid":"FYPO:0002260"}


id: GO:0000322
data:
  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vacuole","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000322","terms_by_termid":{"GO:0000324":null,"GO:0000328":null,"GO:0000329":null}}


id: GO:0015768
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"}]},"cv_name":"biological_process","definition":"The directed movement of maltose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltose is the disaccharide 4-O-alpha-D-glucopyranosyl-D-glucopyranose, an intermediate in the catabolism of glycogen and starch.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"maltose transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015768","terms_by_termid":{"GO:0106081":null}}


id: MOD:01129
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos dAdenosyl","termid":"MOD:01129"}


id: PBO:0000600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Upf1","termid":"PBO:0000600"}


id: GO:0010355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: homogentisic acid + farnesyl diphosphate = 2-methyl-6-farnesylplastoquinol.","definition_xrefs":["PMID:16989822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"homogentisate farnesyltransferase activity","termid":"GO:0010355"}


id: CHEBI:25255
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  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl methanesulfonate","termid":"CHEBI:25255"}


id: FYPO:0008009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere clustering is abnormal. Telomere clustering gathers telomeres during or prior to tethering to the nuclear periphery during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mlr","PMID:15615848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"},{"relation_name":"is_a","term_name":"abnormal telomere localization","termid":"FYPO:0007418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal interphase mitotic telomere clustering during vegetative growth","synonyms":[{"name":"abnormal interphase telomere clustering","type":"broad"},{"name":"abnormal mitotic interphase telomere clustering","type":"exact"},{"name":"abnormal telomere clustering during vegetative growth","type":"exact"}],"termid":"FYPO:0008009"}


id: PBO:0041625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium channel flower domain containing 1","termid":"PBO:0041625"}


id: PBO:0087364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific exo-1,3-beta-glucanase; contributes to ascospore thermoresistance; SPR1 has a paralog, EXG1, that arose from the whole genome duplication","termid":"PBO:0087364"}


id: BFO:0000066
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_in","termid":"BFO:0000066"}


id: MONDO:0022942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness mesenteric diverticula of small bowel neuropathy","termid":"MONDO:0022942","xrefs":{"Monarch":{"xref_id":"0022942"}}}


id: PBO:0034469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0034469"}


id: PBO:0091325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial electron transfer flavoprotein-ubiquinone oxidoreductase Cir2","termid":"PBO:0091325"}


id: PBO:0041680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium dependent secretion activator","termid":"PBO:0041680"}


id: GO:0043150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA that contributes to the process of double-strand break repair via homologous recombination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"part_of","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"DNA synthesis involved in double-strand break repair via homologous recombination","synonyms":[{"name":"DNA synthesis during double-strand break repair via homologous recombination","type":"related"}],"termid":"GO:0043150"}


id: PBO:0094356
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"community_curated","termid":"PBO:0094356"}


id: GO:0043828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylaminomethyl-2-thiouridine + selenophosphate = 5-methylaminomethyl-2-selenouridine + phosphate (at the wobble position in tRNA).","definition_xrefs":["RHEA:42716","PMID:14594807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenotransferase activity","termid":"GO:0016785"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0140101","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"tRNA 2-selenouridine synthase activity","secondary_identifiers":["EC:2.9.1.3","MetaCyc:RXN0-2281"],"termid":"GO:0043828"}


id: PBO:0017914
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YPD1","termid":"PBO:0017914"}


id: PBO:0046736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease 3'-5' domain containing 2","termid":"PBO:0046736"}


id: PBO:0081482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 362","termid":"PBO:0081482"}


id: PBO:0083399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF ULP2/YIL031W","termid":"PBO:0083399"}


id: GO:1900308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltoheptaose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heptasaccharide transport","termid":"GO:1900296"},{"relation_name":"is_a","term_name":"regulation of maltoheptaose transport","termid":"GO:1900306"},{"relation_name":"positively_regulates","term_name":"maltoheptaose transport","termid":"GO:2001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of maltoheptaose transport","synonyms":[{"name":"activation of maltoheptaose transport","type":"narrow"},{"name":"up regulation of maltoheptaose transport","type":"exact"},{"name":"up-regulation of maltoheptaose transport","type":"exact"},{"name":"upregulation of maltoheptaose transport","type":"exact"}],"termid":"GO:1900308"}


id: GO:1905824
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116469],"is_not":false,"summary":null,"term":"GO:1905824"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic sister chromatid arm separation.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:18765790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid separation","termid":"GO:1901970"},{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid arm separation","termid":"GO:1905822"},{"relation_name":"positively_regulates","term_name":"mitotic sister chromatid arm separation","termid":"GO:1990891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic sister chromatid arm separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic sister chromatid arm separation","type":"narrow"},{"name":"up regulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"up-regulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"upregulation of mitotic sister chromatid arm separation","type":"exact"}],"termid":"GO:1905824","terms_by_termid":{"GO:1905824":null}}


id: GO:0090328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of olfactory learning. Olfactory learning is any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"olfactory learning","termid":"GO:0008355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olfactory learning","termid":"GO:0090328"}


id: PBO:0067984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 286","termid":"PBO:0067984"}


id: GO:0050368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine = 3-amino-3-(4-hydroxyphenyl)propanoate.","definition_xrefs":["RHEA:15781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-tyrosine 2,3-aminomutase activity","secondary_identifiers":["KEGG_REACTION:R00739","EC:5.4.3.6","MetaCyc:TYROSINE-23-AMINOMUTASE-RXN"],"synonyms":[{"name":"tyrosine 2,3-aminomutase activity","type":"related"},{"name":"tyrosine alpha,beta-mutase activity","type":"related"}],"termid":"GO:0050368"}


id: MONDO:0018551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent urachus is a type of congenital urachal anomaly characterized by a persistent communication between the bladder and the umbilicus, secondary to non occlusion of the urachal lumen, manifesting as clear drainage from the umbilicus.","definition_xrefs":["Orphanet:431341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital urachal anomaly","termid":"MONDO:0018565"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent urachus","secondary_identifiers":["UMLS:C0266357","NCIT:C99005","GARD:21798","MEDGEN:75610","HP:0010479","icd11.foundation:1391202028","SCTID:398316009"],"synonyms":[{"name":"patent urachus","type":"exact"},{"name":"patent urachus (disease)","type":"exact"}],"termid":"MONDO:0018551","xrefs":{"Monarch":{"xref_id":"0018551"}}}


id: PBO:0063924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 3","termid":"PBO:0063924"}


id: PBO:0074931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 98","termid":"PBO:0074931"}


id: GO:0071934
data:
  {"annotated_genes":["SJAG_00835","SJAG_04673","SJAG_03652","SJAG_02962"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89935,89936],"is_not":false,"summary":null,"term":"GO:0071934"},{"annotations":[103429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[100479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"}]},"cv_name":"biological_process","definition":"The process in which thiamine is transported across a membrane. Thiamine is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine transport","termid":"GO:0015888"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"azole transmembrane transport","termid":"GO:0045117"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound transmembrane transport","termid":"GO:0072531"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"thiamine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thiamin transmembrane transport","type":"exact"},{"name":"thiamine membrane transport","type":"exact"},{"name":"vitamin B1 transmembrane transport","type":"exact"}],"termid":"GO:0071934","terms_by_termid":{"GO:0071934":null,"GO:0140125":null,"GO:1990545":null}}


id: SO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short (typically a few hundred base pairs) DNA sequence that has a single occurrence in a genome and whose location and base sequence are known.","direct_ancestors":[{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STS","synonyms":[{"name":"INSDC_feature:STS","type":"exact"},{"name":"sequence tag site","type":"exact"}],"termid":"SO:0000331"}


id: PBO:0015705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial acylglycerol lipase (predicted)","termid":"PBO:0015705"}


id: PBO:0089234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH/VHS domain protein","termid":"PBO:0089234"}


id: MONDO:0958270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty","termid":"MONDO:0019165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central precocious puberty in male","secondary_identifiers":["Orphanet:649929","MEDGEN:1853132","UMLS:C5816736"],"termid":"MONDO:0958270","xrefs":{"Monarch":{"xref_id":"0958270"}}}


id: GO:0070659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed inner ear sensory epithelia.","definition_xrefs":["GOC:dsf","PMID:19381250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear sensory epithelium regeneration","termid":"GO:0070659"}


id: GO:0031210
data:
  {"annotated_genes":["SJAG_00946"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69646],"is_not":false,"summary":null,"term":"GO:0031210"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatidylcholine, a glycophospholipid in which a phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"quaternary ammonium group binding","termid":"GO:0050997"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"phosphatidylcholine binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031210","terms_by_termid":{"GO:0031210":null}}


id: PBO:0025430
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Survival Motor Neuron","termid":"PBO:0025430"}


id: GO:0047609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylputrescine + H2O = acetate + putrescine.","definition_xrefs":["EC:3.5.1.62","RHEA:23412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0019213","GO:0016787"],"is_obsolete":false,"name":"acetylputrescine deacetylase activity","secondary_identifiers":["KEGG_REACTION:R01156","MetaCyc:ACETYLPUTRESCINE-DEACETYLASE-RXN"],"synonyms":[{"name":"N-acetylputrescine acetylhydrolase activity","type":"related"}],"termid":"GO:0047609"}


id: MONDO:0015175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune pancreatitis (AIP) is a rare pancreatic disease characterized by chronic non-alcoholic pancreatitis that presents with abdominal pain, steatorrhea, obstructive jaundice and responds well to steroid therapy and is seen in two subforms: type 1 AIP which affects elderly males, involves other organs and has increased immunoglobin G4 (IgG4) levels and type 2 AIP which affects both sexes equally but presents at a younger age and has no other organ involvement or increased IgG4 levels.","definition_xrefs":["Orphanet:103919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"autoimmune disorder of gastrointestinal tract","termid":"MONDO:0000588"},{"relation_name":"is_a","term_name":"pancreatitis","termid":"MONDO:0004982"},{"relation_name":"is_a","term_name":"IgG4-related disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"autoimmune pancreatitis","secondary_identifiers":["DOID:0040091","SCTID:448542008","MedDRA:10069002","MESH:D000081012","GARD:10911","NANDO:1200925","UMLS:C2609129","MEDGEN:750633","NANDO:2200943","icd11.foundation:2057951941"],"synonyms":[{"name":"AIP","type":"exact"},{"name":"lymphoplasmocytic sclerosing pancreatitis","type":"related"}],"termid":"MONDO:0015175","xrefs":{"Monarch":{"xref_id":"0015175"}}}


id: FYPO:0001701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to bortezomib. Cells stop growing (and may die) at a concentration of bortezomib that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to bortezomib","synonyms":[{"name":"hypersensitive to bortezomib","type":"exact"},{"name":"sensitive to Velcade","type":"exact"},{"name":"sensitive to bortezomib during mitotic cell cycle","type":"related"},{"name":"sensitive to bortezomib during vegetative growth","type":"exact"}],"termid":"FYPO:0001701"}


id: GO:0046091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyadenosine metabolic process","termid":"GO:0046090"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside biosynthetic process","termid":"GO:0046123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxyadenosine biosynthetic process","synonyms":[{"name":"deoxyadenosine anabolism","type":"exact"},{"name":"deoxyadenosine biosynthesis","type":"exact"},{"name":"deoxyadenosine formation","type":"exact"},{"name":"deoxyadenosine synthesis","type":"exact"}],"termid":"GO:0046091"}


id: GO:0141174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts anti-inflammatory cytokine signaling in the host organism, either by disruption of production, sequesteration, or destruction of at least one component of the signaling pathway.  Anti-inflammatory cytokines include: interleukin (IL)-1, IL-4, IL-6, IL-10, IL-11, and IL-13. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:32754056","PMID:19168731","PMID:29720526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host receptor-mediated signal transduction","termid":"GO:0075109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host anti-inflammatory cytokine signaling","synonyms":[{"name":"negative regulation by symbiont of host anti-inflammatory cytokine production","type":"exact"},{"name":"suppression by symbiont of host anti-inflammatory cytokine production","type":"exact"},{"name":"suppression by symbiont of host anti-inflammatory cytokine secretion","type":"related"},{"name":"symbiont-mediated degradation of host anti-inflammatory cytokine","type":"narrow"},{"name":"symbiont-mediated sequestering of host anti-inflammatory cytokine","type":"related"},{"name":"symbiont-mediated suppression of host anti-inflammatory cytokine production","type":"related"}],"termid":"GO:0141174"}


id: GO:0044430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cytoskeleton, a cellular scaffolding or skeleton that maintains cell shape, enables some cell motion (using structures such as flagella and cilia), and plays important roles in both intra-cellular transport (e.g. the movement of vesicles and organelles) and cellular division. Includes constituent parts of intermediate filaments, microfilaments, microtubules, and the microtrabecular lattice.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoskeletal part (obsolete GO:0044430)","secondary_identifiers":["NIF_Subcellular:sao1635329413"],"synonyms":[{"name":"cytoskeletal element","type":"exact"},{"name":"cytoskeleton component","type":"exact"}],"termid":"GO:0044430"}


id: PBO:0052742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 34","termid":"PBO:0052742"}


id: PBO:0064506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit G","termid":"PBO:0064506"}


id: PBO:0083775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nuclear protein; constituent of 66S pre-ribosomal particles; required for maturation of 25S and 5.8S rRNAs; required for maintenance of M1 satellite double-stranded RNA of the L-A virus","termid":"PBO:0083775"}


id: PBO:0065284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich and Gla domain 4","termid":"PBO:0065284"}


id: MONDO:0005192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the exocrine pancreas","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant exocrine pancreas neoplasm","termid":"MONDO:0002116"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"exocrine pancreatic carcinoma","secondary_identifiers":["UMLS:C0235974","NCIT:C3850","SCTID:372142002","EFO:0002618","MEDGEN:65917","DOID:4905"],"synonyms":[{"name":"cancer of pancreas","type":"broad"},{"name":"cancer of the pancreas","type":"broad"},{"name":"carcinoma of exocrine pancreas","type":"exact"},{"name":"carcinoma of pancreas","type":"exact"},{"name":"carcinoma of the pancreas","type":"exact"},{"name":"exocrine cancer","type":"broad"},{"name":"exocrine pancreas carcinoma","type":"exact"},{"name":"pancreas cancer","type":"broad"},{"name":"pancreas carcinoma","type":"exact"},{"name":"pancreatic cancer","type":"broad"},{"name":"pancreatic cancer (not islets)","type":"exact"},{"name":"pancreatic carcinoma","type":"exact"},{"name":"pancreatic carcinoma, familial","type":"related"}],"termid":"MONDO:0005192","xrefs":{"Monarch":{"xref_id":"0005192"}}}


id: GO:0010506
data:
  {"annotated_genes":["SJAG_01509","SJAG_03799","SJAG_04502","SJAG_04655","SJAG_02723","SJAG_00169","SJAG_04249","SJAG_02765","SJAG_05346","SJAG_00824","SJAG_04496","SJAG_03371","SJAG_05000","SJAG_02433","SJAG_01311","SJAG_01184","SJAG_01716","SJAG_04435","SJAG_03851","SJAG_00004","SJAG_00457","SJAG_04232","SJAG_00704","SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65685,65823,72411,78158,79383,79528],"is_not":false,"summary":null,"term":"GO:0010506"},{"annotations":[72288,76228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010507"},{"annotations":[106451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"},{"annotations":[108451,108361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[97420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[109467,114372,111635,99247,98678,73373,73400,79751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010508"},{"annotations":[68697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[106060,75097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[89309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"regulates","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00169":null,"SJAG_00457":null,"SJAG_00704":null,"SJAG_00824":null,"SJAG_01184":null,"SJAG_01311":null,"SJAG_01509":null,"SJAG_01716":null,"SJAG_02433":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_03371":null,"SJAG_03799":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04249":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05000":null,"SJAG_05289":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"regulation of autophagy","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0010506","terms_by_termid":{"GO:0010506":null,"GO:0010507":null,"GO:0010508":null,"GO:0016239":null,"GO:0016242":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null,"GO:2000786":null}}


id: MONDO:1012683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any X-linked chondrodysplasia characterized by spondylosis and arthrosis that occurs in dogs.","definition_xrefs":["PMID:17212747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, dog","termid":"MONDO:1011194"},{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylo-epiphyseal dysplasia tarda, X-linked, dog","secondary_identifiers":["OMIA:001448-9615"],"synonyms":[{"name":"spondyloepiphyseal dysplasia, congenital type, dog","type":"related"}],"termid":"MONDO:1012683","xrefs":{"Monarch":{"xref_id":"1012683"}}}


id: GO:1905304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac myofibril assembly.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:16151019","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of actomyosin structure organization","termid":"GO:0110020"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"regulation of cardiac myofibril assembly","synonyms":[{"name":"regulation of cardiac myofibril development","type":"exact"},{"name":"regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"regulation of heart myofibril assembly","type":"related"}],"termid":"GO:1905304"}


id: PBO:0090944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase chaperone Atp11","termid":"PBO:0090944"}


id: GO:0047405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a pyrimidine 5'-nucleotide = ribose-5-phosphate + a pyrimidine.","definition_xrefs":["EC:3.2.2.10","MetaCyc:3.2.2.10-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"pyrimidine-5'-nucleotide nucleosidase activity","secondary_identifiers":["RHEA:13425"],"synonyms":[{"name":"Pyr5N activity","type":"related"},{"name":"pyrimidine nucleotide N-ribosidase activity","type":"related"},{"name":"pyrimidine-5'-nucleotide phosphoribo(deoxyribo)hydrolase activity","type":"related"}],"termid":"GO:0047405"}


id: PR:Q96WW0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein WRAP73 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C32H8.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.09","secondary_identifiers":["UniProtKB:Q96WW0"],"synonyms":[{"name":"Spom972h-WRAP73","type":"exact"}],"termid":"PR:Q96WW0"}


id: GO:0005942
data:
  {"annotated_genes":["SJAG_02699","SJAG_00114","SJAG_01876","SJAG_04860","SJAG_03403","SJAG_04552"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111310,71273,76458,94418,77039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034271"},{"annotations":[77040,105515,76459,71274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034272"}]},"cv_name":"cellular_component","definition":"A protein complex capable of phosphatidylinositol 3-kinase activity and containing subunits of any phosphatidylinositol 3-kinase (PI3K) enzyme. These complexes are divided in three classes (called I, II and III) that differ for their presence across taxonomic groups and for the type of their constituents. Catalytic subunits of phosphatidylinositol 3-kinase enzymes are present in all 3 classes; regulatory subunits of phosphatidylinositol 3-kinase enzymes are present in classes I and III; adaptor proteins have been observed in class II complexes and may be present in other classes too.","definition_xrefs":["GOC:bf","PMID:24587488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"extrinsic component of membrane","termid":"GO:0019898"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_01876":null,"SJAG_02699":null,"SJAG_03403":null,"SJAG_04552":null,"SJAG_04860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"1-phosphatidylinositol 3-kinase complex","type":"exact"},{"name":"PI3-kinase p85-subunit alpha- PI3-kinase p110 complex","type":"narrow"},{"name":"PI3K complex","type":"exact"},{"name":"PIK3C3-PIK3R4 complex","type":"narrow"},{"name":"PIK3CA-PIK3R1 complex","type":"narrow"},{"name":"phosphoinositide 3-kinase complex","type":"exact"}],"termid":"GO:0005942","terms_by_termid":{"GO:0034271":null,"GO:0034272":null}}


id: PBO:0068930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 173, pseudogene","termid":"PBO:0068930"}


id: PBO:0081970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZRANB2 divergent transcript","termid":"PBO:0081970"}


id: GO:0048753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pigment granule.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"cellular pigmentation","termid":"GO:0033059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment granule organization","synonyms":[{"name":"pigment granule organisation","type":"exact"},{"name":"pigment granule organization and biogenesis","type":"related"}],"termid":"GO:0048753"}


id: PBO:0048444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 7","termid":"PBO:0048444"}


id: PBO:0026924
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_serine_phosphorylation_at_RxxS_site","termid":"PBO:0026924"}


id: GO:0007375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Internalization of the anterior midgut into the interior of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior midgut invagination","termid":"GO:0007375"}


id: GO:0036185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 15-oxo-(5S,6R)-dihydroxy-(7E,9E,11Z,13E)-eicosatetraenoate + NADH + H+ = 15-oxo-(5S,6R)-dihydroxy-(7E,9E,11Z)-eicosatrienoate + NAD+.","definition_xrefs":["PMID:10837478","RHEA:41592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"13-lipoxin reductase activity","secondary_identifiers":["Reactome:R-HSA-2161844"],"termid":"GO:0036185"}


id: MONDO:0022858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete continuous spike-wave during slow sleep syndrome (obsolete MONDO:0022858)","secondary_identifiers":["NANDO:1200601"],"termid":"MONDO:0022858","xrefs":{"Monarch":{"xref_id":"0022858"}}}


id: MONDO:0011669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome including neonatal and infantile hypotonia and failure to thrive, cystinuria type 1 and nephrolithiasis, growth retardation due to growth hormone deficiency, and minor facial dysmorphism.","definition_xrefs":["Orphanet:163690"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 2","termid":"MONDO:0016884"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"hypotonia-cystinuria syndrome","secondary_identifiers":["MEDGEN:341133","icd11.foundation:1852649756","GARD:16998","icd11.foundation:1742079513","MESH:C564710","OMIM:606407","UMLS:C1848030","DOID:0060858","Orphanet:238517","SCTID:721173005"],"synonyms":[{"name":"HCS","type":"exact"},{"name":"cystinuria with mitochondrial disease","type":"exact"},{"name":"homozygous 2P16 deletion syndrome","type":"related"},{"name":"homozygous 2P16 deletion syndrome, formerly","type":"related"},{"name":"homozygous 2P21 deletion syndrome","type":"related"},{"name":"hypotonia-cystinuria syndrome","type":"exact"},{"name":"hypotonia-cystinuria syndrome type 1","type":"exact"},{"name":"hypotonia-cystinuria type 1 syndrome","type":"exact"}],"termid":"MONDO:0011669","xrefs":{"Monarch":{"xref_id":"0011669"}}}


id: GO:0033707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxymugineic acid + NAD(P)+ = 3''-deamino-3''-oxonicotianamine + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3''-deamino-3''-oxonicotianamine reductase activity","secondary_identifiers":["MetaCyc:1.1.1.285-RXN"],"synonyms":[{"name":"2'-deoxymugineic acid:NAD(P)+ 3''-oxidoreductase activity","type":"related"}],"termid":"GO:0033707"}


id: PBO:0052193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMB2 antisense RNA 1","termid":"PBO:0052193"}


id: PBO:0075604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2","termid":"PBO:0075604"}


id: GO:0019248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-lactate from methylglyoxal, via the intermediate (R)-lactaldehyde.","definition_xrefs":["GOC:dph","GOC:go_curators","MetaCyc:MGLDLCTANA-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate biosynthetic process","termid":"GO:0019249"},{"relation_name":"is_a","term_name":"methylglyoxal catabolic process to lactate","termid":"GO:0061727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-lactate biosynthetic process from methylglyoxal via (R)-lactaldehyde","synonyms":[{"name":"D-lactate anabolism from methylglyoxal via (R)-lactaldehyde","type":"exact"},{"name":"D-lactate formation from methylglyoxal via (R)-lactaldehyde","type":"exact"},{"name":"D-lactate synthesis from methylglyoxal via (R)-lactaldehyde","type":"exact"}],"termid":"GO:0019248"}


id: GO:0061785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An endopeptidase activity that uses peptidoglycan as a substrate.","definition_xrefs":["GOC:jh","GOC:dph","PMID:22748813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"peptidoglycan muralytic activity","termid":"GO:0061783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0140096","GO:0008233"],"is_obsolete":false,"name":"peptidoglycan endopeptidase activity","termid":"GO:0061785"}


id: PBO:0075852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 2 interacting protein","termid":"PBO:0075852"}


id: GO:0018597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + NH4+ + O2 = A + H+ + H2O + hydroxylamine.","definition_xrefs":["PMID:16347810","RHEA:27341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ammonia monooxygenase activity","secondary_identifiers":["EC:1.14.99.39"],"termid":"GO:0018597"}


id: PBO:0028107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-galactose_absent_from_cell_wall_glycoprotein_glycan","termid":"PBO:0028107"}


id: FYPO:0000986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter results in a higher-than-normal level of transcription at a given pheromone level.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased transcriptional response to pheromone at normal pheromone level (obsolete FYPO:0000986)","synonyms":[{"name":"increased positive regulation of transcription from RNA polymerase II promoter by pheromones at normal pheromone level","type":"exact"},{"name":"increased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"increased transcriptional response to pheromone","type":"related"},{"name":"sensitive to pheromone","type":"related"}],"termid":"FYPO:0000986"}


id: GO:0048135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a group of interconnected cells derived from a single female gonial founder cell.","definition_xrefs":["PMID:10370240","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line cyst formation","termid":"GO:0048134"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line cyst formation","synonyms":[{"name":"female germline cyst formation","type":"exact"}],"termid":"GO:0048135"}


id: MONDO:0043959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic process that resembles a malignant lymphoma, but has a benign course.","definition_xrefs":["NCIT:C3825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pseudolymphoma","secondary_identifiers":["EFO:1001831","SCTID:19750001","UMLS:C0221269","MEDGEN:67450","MESH:D019310"],"synonyms":[{"name":"benign lymphoid hyperplasia","type":"related"},{"name":"hyperplasia, reactive lymphoid","type":"related"},{"name":"hyperplasias, reactive lymphoid","type":"related"},{"name":"lymphocytoma","type":"related"},{"name":"lymphocytomas","type":"related"},{"name":"lymphoid Hyperplasias, reactive","type":"related"},{"name":"lymphoid hyperplasia, reactive","type":"related"},{"name":"pseudolymphoma","type":"exact"},{"name":"pseudolymphomas","type":"related"},{"name":"reactive lymphoid Hyperplasias","type":"related"},{"name":"reactive lymphoid hyperplasia","type":"related"}],"termid":"MONDO:0043959","xrefs":{"Monarch":{"xref_id":"0043959"}}}


id: PBO:0064546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 8, pseudogene","termid":"PBO:0064546"}


id: MONDO:0700245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive epidermolytic ichthyosis","termid":"MONDO:0044742"},{"relation_name":"is_a","term_name":"epidermolytic hyperkeratosis 2","termid":"MONDO:0958184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"epidermolytic hyperkeratosis 2B, autosomal recessive","secondary_identifiers":["OMIM:620707","UMLS:C5882753","MEDGEN:1845041"],"termid":"MONDO:0700245","xrefs":{"Monarch":{"xref_id":"0700245"}}}


id: PBO:0084537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p14.5 protein family; functionally complements Mmf1p function when targeted to mitochondria; heat shock inducible; high-dosage growth inhibitor; forms a homotrimer in vitro; HMF1 has a paralog, MMF1, that arose from the whole genome duplication","termid":"PBO:0084537"}


id: FYECO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A temperature at which a conditional (heat- or cold-sensitive) mutant does not grow.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restrictive temperature","synonyms":[{"name":"non-permissive temperature","type":"exact"},{"name":"nonpermissive temperature","type":"exact"}],"termid":"FYECO:0000229"}


id: SO:0001915
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region defined by a cluster of experimentally determined transcription starting sites.","definition_xrefs":["PMID:21372179","PMID:19624849","SO:andrewgibson"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_start_cluster","synonyms":[{"name":"TSC","type":"exact"},{"name":"TSS cluster","type":"exact"},{"name":"transcriptional initiation cluster","type":"exact"},{"name":"transcriptional start site cluster","type":"exact"}],"termid":"SO:0001915"}


id: GO:0033574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a testosterone stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to testosterone","synonyms":[{"name":"response to testosterone stimulus","type":"exact"}],"termid":"GO:0033574"}


id: FYPO:0002944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal when the cell is in G0 phase. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during G0","termid":"FYPO:0003864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during G0","synonyms":[{"name":"decreased RNA accumulation during G0","type":"related"},{"name":"decreased RNA level during cell quiescence","type":"exact"},{"name":"decreased RNA level during quiescence","type":"exact"},{"name":"decreased transcript level during G0","type":"exact"},{"name":"reduced RNA level during G0","type":"exact"}],"termid":"FYPO:0002944"}


id: PBO:0044248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB and zona pellucida like domains 1","termid":"PBO:0044248"}


id: GO:1902063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of betaine aldehyde.","definition_xrefs":["PMID:23563483","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"betaine aldehyde metabolic process","termid":"GO:1902061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"betaine aldehyde biosynthetic process","synonyms":[{"name":"betaine aldehyde anabolism","type":"exact"},{"name":"betaine aldehyde biosynthesis","type":"exact"},{"name":"betaine aldehyde formation","type":"exact"},{"name":"betaine aldehyde synthesis","type":"exact"}],"termid":"GO:1902063"}


id: RO:0002413
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p1 directly provides input for p2 iff there exists some c such that p1 has_output c and p2 has_input c","direct_ancestors":[{"relation_name":"is_a","term_name":"immediately_causally_upstream_of","termid":"RO:0002412"},{"relation_name":"is_a","term_name":"transitively_provides_input_for","termid":"RO:0002414"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_provides_input_for","termid":"RO:0002413"}


id: PBO:0085490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proline permease; required for high-affinity transport of proline; also transports the toxic proline analog azetidine-2-carboxylate (AzC); PUT4 transcription is repressed in ammonia-grown cells","termid":"PBO:0085490"}


id: PBO:0087650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterodimeric FACT complex (Spt16p-Pob3p); FACT associates with chromatin via interaction with Nhp6Ap and Nhp6Bp, and reorganizes nucleosomes to facilitate access to DNA by RNA and DNA polymerases; protein abundance increases in response to DNA replication stress","termid":"PBO:0087650"}


id: MONDO:0005658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with astrovirus, causing gastroenteritis in human infants, calves, lambs, and piglets.","definition_xrefs":["MESH:D019350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Astroviridae infectious disease","secondary_identifiers":["MEDGEN:84000","UMLS:C0376550"],"termid":"MONDO:0005658","xrefs":{"Monarch":{"xref_id":"0005658"}}}


id: PBO:0072153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 30","termid":"PBO:0072153"}


id: MONDO:0003158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating malignant tumor characterized by the presence of atypical cells with myoepithelial differentiation. Representative examples include malignant breast myoepithelioma and salivary gland myoepithelial carcinoma.","definition_xrefs":["NCIT:C7596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoepithelial tumor","termid":"MONDO:0002380"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant myoepithelioma","secondary_identifiers":["DOID:4838","ONCOTREE:STMYEC","UMLS:C0334699","ICDO:8982/3","MEDGEN:90822"],"synonyms":[{"name":"malignant myoepithelioma","type":"exact"},{"name":"myoepithelial carcinoma","type":"exact"},{"name":"myoepithelioma carcinoma","type":"related"},{"name":"myoepithelioma, malignant","type":"exact"},{"name":"soft tissue myoepithelial carcinoma","type":"related"}],"termid":"MONDO:0003158","xrefs":{"Monarch":{"xref_id":"0003158"}}}


id: GO:0102037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 4-nitrotoluene + NADH + O2 = 4-nitrobenzyl alcohol + NAD+ + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-nitrotoluene monooxygenase activity","secondary_identifiers":["MetaCyc:R361-RXN"],"termid":"GO:0102037"}


id: FYPO:0004051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is increased in a cell culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glutathione transferase activity","termid":"FYPO:0003981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased glutathione transferase activity during stationary phase","synonyms":[{"name":"increased glutathione transferase activity in stationary phase","type":"exact"}],"termid":"FYPO:0004051"}


id: GO:0160030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of pollen intine, the inner layer of the pollen wall. The reticulate pollen wall pattern consists of two layers, exine and intine.","definition_xrefs":["PMID:35498668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pollen wall assembly","termid":"GO:0010208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pollen intine formation","termid":"GO:0160030"}


id: GO:0090345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organohalogen metabolic process","termid":"GO:0090345"}


id: PR:Q1MTR1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC11C11.11c gene.","definition_xrefs":["UniProtKB:Q1MTR1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-dependent helicase irc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.11c","synonyms":[{"name":"Spom972h-SPBC11C11.11c","type":"exact"}],"termid":"PR:Q1MTR1"}


id: PBO:0063427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 1","termid":"PBO:0063427"}


id: MOD:01896
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by trifluoroacetic acid forming an adduct, either a salt or a hydrogen bonded carboxylic acid dimer, with an amino acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifluoroacetic acid adduct","synonyms":[{"name":"TFA","type":"exact"}],"termid":"MOD:01896"}


id: GO:1904570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine incorporation.","definition_xrefs":["PMID:21685449","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational elongation","termid":"GO:0045900"},{"relation_name":"is_a","term_name":"regulation of selenocysteine incorporation","termid":"GO:1904569"},{"relation_name":"negatively_regulates","term_name":"selenocysteine incorporation","termid":"GO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of selenocysteine incorporation","synonyms":[{"name":"down regulation of selenocysteine incorporation","type":"exact"},{"name":"down-regulation of selenocysteine incorporation","type":"exact"},{"name":"downregulation of selenocysteine incorporation","type":"exact"},{"name":"inhibition of selenocysteine incorporation","type":"narrow"}],"termid":"GO:1904570"}


id: PBO:0085991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for selective and nonselective autophagy, and mitophagy; regulates the rate of autophagosome formation; interacts with Atg9p, and has a similar peri-mitochondrial localization; elevated Gcn4p-dependent expression under autophagy-inducing conditions; mobilized into polysomes upon a shift from a fermentable to nonfermentable carbon source; potential Cdc28p substrate; ATG41 has a paralog, ICY1, that arose from the whole genome duplication","termid":"PBO:0085991"}


id: GO:0032576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a linoleoyl ((9Z,12Z)-octadeca-9,12-dienoyl) group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"O-linoleoyltransferase activity","termid":"GO:0032576"}


id: MONDO:0000507
data:
  {"annotated_genes":["SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008178"}]},"cv_name":"mondo","definition":"Inclusion body myopathy with Paget disease of bone and frontotemporal dementia (IBMPFD) is a multisystem degenerative genetic disorder characterized by adult-onset proximal and distal muscle weakness (clinically resembling limb-girdle muscular dystrophy); early-onset Paget disease of bone, manifesting with bone pain, deformity and enlargement of the long-bones; and premature frontotemporal dementia, manifesting first with dysnomia, dyscalculia and comprehension deficits followed by progressive aphasia, alexia, and agraphia. As the disease progresses, muscle weakness begins to affect the other limbs and respiratory muscles, ultimately resulting in respiratory or cardiac failure.","definition_xrefs":["Orphanet:52430"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary inclusion-body myopathy","termid":"MONDO:0016112"},{"relation_name":"is_a","term_name":"frontotemporal dementia","termid":"MONDO:0017276"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0005336"],"is_obsolete":false,"name":"inclusion body myopathy with Paget disease of bone and frontotemporal dementia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050881","GARD:10899","SCTID:703544004","icd11.foundation:1947548457","MEDGEN:322251","OMIMPS:167320","UMLS:C1833662"],"synonyms":[{"name":"IBMPFD","type":"exact"},{"name":"inclusion body myopathy with Paget's disease of bone and frontotemporal dementia","type":"exact"},{"name":"inclusion body myopathy with early-onset Paget disease and frontotemporal dementia","type":"related"},{"name":"inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia","type":"exact"},{"name":"inclusion body myopathy/Paget disease/frontotemporal dementia","type":"exact"},{"name":"limb-girdle muscular dystrophy with Paget disease of bone","type":"exact"},{"name":"pagetoid amyotrophic lateral sclerosis","type":"exact"},{"name":"pagetoid neuroskeletal syndrome","type":"exact"}],"termid":"MONDO:0000507","terms_by_termid":{"MONDO:0008178":null},"xrefs":{"Monarch":{"xref_id":"0000507"}}}


id: PBO:0113374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative AMP hydrolase; secreted protein proposed to function as an adenosine monophosphatase in NAD+ degradation, via nucleoside salvage pathway that converts NAD+ to AMP and adenosine; overexpression results in adenosine accumulation and reduced levels of NAD+, deletion results in increased NAD+ and NADH; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; similar to human NT5E/CD73 gene involved in cancer progression","termid":"PBO:0113374"}


id: PBO:0077617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 8","termid":"PBO:0077617"}


id: FYPO:0005195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type) during S phase of the mitotic cell cycle. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation","termid":"FYPO:0002799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein degradation during mitotic S phase","synonyms":[{"name":"normal protein breakdown during mitotic S phase","type":"exact"},{"name":"normal protein catabolic process during mitotic S phase","type":"exact"},{"name":"normal protein catabolism during mitotic S phase","type":"exact"},{"name":"normal protein degradation during S phase during mitotic cell cycle","type":"related"},{"name":"normal protein degradation during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0005195"}


id: GO:0140609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions or pathway resulting in the formation of phycocyanobilin, which involves the oxidative cleavage of heme by a heme oxygenase (HO) to form biliverdin IX alpha. Biliverdin IX alpha is subsequently converted to phycocyanobilin by a ferredoxin-dependent oxidoreductase (PCYA).","definition_xrefs":["PMID:23345435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"phycocyanobilin biosynthetic process","synonyms":[{"name":"phycocyanobilin biosynthesis","type":"exact"}],"termid":"GO:0140609"}


id: PBO:0029162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_nitrogen_starvation","termid":"PBO:0029162"}


id: GO:0034486
data:
  {"annotated_genes":["SJAG_01319","SJAG_03899","SJAG_03401","SJAG_05213","SJAG_04698","SJAG_01990","SJAG_00051","SJAG_00877","SJAG_04725","SJAG_03256","SJAG_02029","SJAG_01080","SJAG_01344","SJAG_03497","SJAG_03400","SJAG_03442"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73278],"is_not":false,"summary":null,"term":"GO:0034486"},{"annotations":[76880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032974"},{"annotations":[102593,109820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[90186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[94386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[117997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"},{"annotations":[115355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[95862,96848,117999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[97151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[103623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[103625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[97152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[103626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[102595,103627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[97153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[109822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[103629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[103630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[95863,118000,96849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[88892,114306,106476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180042"},{"annotations":[114129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"}]},"cv_name":"biological_process","definition":"The process in which a solute is transported from one side of the vacuolar membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01080":null,"SJAG_01319":null,"SJAG_01344":null,"SJAG_01990":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03401":null,"SJAG_03442":null,"SJAG_03497":null,"SJAG_03899":null,"SJAG_04698":null,"SJAG_04725":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"vacuolar transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar membrane transport","type":"exact"}],"termid":"GO:0034486","terms_by_termid":{"GO:0032974":null,"GO:0034486":null,"GO:0034488":null,"GO:0034490":null,"GO:0036246":null,"GO:0036249":null,"GO:0071996":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0140146":null,"GO:0140147":null,"GO:0180042":null,"GO:1901482":null,"GO:1990591":null,"GO:1990818":null}}


id: PBO:0081740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF670-ZNF695 readthrough (NMD candidate)","termid":"PBO:0081740"}


id: PBO:0073271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 15","termid":"PBO:0073271"}


id: PBO:0028045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_polymerization","termid":"PBO:0028045"}


id: GO:0034535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxy-8-methylnaphthalene + O2 = 2-hydroxy-8-methylchromene-2-carboxylate + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxy-8-methylnaphthalene dioxygenase activity (obsolete GO:0034535)","termid":"GO:0034535"}


id: GO:1904195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of granulosa cell proliferation.","definition_xrefs":["GO_REF:0000058","PMID:22383759","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"granulosa cell proliferation","termid":"GO:1990739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of granulosa cell proliferation","termid":"GO:1904195"}


id: MONDO:0006534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of physical urticarias (or hives) that appears when a person is sweating.","definition_xrefs":["EFO:1000679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical urticaria","termid":"MONDO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cholinergic urticaria","secondary_identifiers":["SCTID:73098005","DOID:14443","ICD10CM:L50.5","ICD9:708.5","MEDGEN:508939","UMLS:C0152230","Wikipedia:Cholinergic_urticaria","icd11.foundation:855107748"],"termid":"MONDO:0006534","xrefs":{"Monarch":{"xref_id":"0006534"}}}


id: PBO:0038377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_treated_by_substance","termid":"PBO:0038377"}


id: RO:0002230
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x ends with y if and only if x has part y and the time point at which x ends is equivalent to the time point at which y ends. Formally: α(y) > α(x) ∧ ω(y) = ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"},{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends_with","termid":"RO:0002230"}


id: PBO:0028336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K5,_H4-K8,_H4-K12_and_H4-K16_acetylation_at_centromere_central_core","termid":"PBO:0028336"}


id: MONDO:0004831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rapidly growing, poorly circumscribed, mass-forming proliferation that arises from the subcutaneous tissues. It is characterized by the presence of spindle-shaped fibroblasts, round ganglion-like cells, myxoid to collagenous stroma formation, and high mitotic activity. It recurs only rarely following local excision and does not metastasize.","definition_xrefs":["NCIT:C4728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fasciitis","termid":"MONDO:0004830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferative fasciitis","secondary_identifiers":["DOID:9599","MEDGEN:98496","SCTID:254737002","UMLS:C0432528"],"termid":"MONDO:0004831","xrefs":{"Monarch":{"xref_id":"0004831"}}}


id: SO:1000067
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation causing a disruption of the translational reading frame, due to the deletion of a nucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000067 sequence_variant_causing_minus_1_frameshift (obsolete SO:1000067)","synonyms":[{"name":"minus 1 frameshift mutation","type":"exact"},{"name":"sequence variant causing minus 1 frameshift","type":"exact"}],"termid":"SO:1000067"}


id: PBO:0074639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 31B","termid":"PBO:0074639"}


id: PBO:0047701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMC1-LUC7L2 readthrough","termid":"PBO:0047701"}


id: PR:Q9Y7L7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol N-acetylglucosaminyltransferase subunit H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15231:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase subunit gpi15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.05","secondary_identifiers":["UniProtKB:Q9Y7L7"],"synonyms":[{"name":"PIGH homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC685.05","type":"related"},{"name":"Spom972h-PIGH","type":"exact"}],"termid":"PR:Q9Y7L7"}


id: MONDO:0013649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypotrichosis that has material basis in an autosomal recessive mutation on chromosome 10q11.23-q22.3.","definition_xrefs":["DOID:0110706","PMID:20054564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"hypotrichosis simplex","termid":"MONDO:0018914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 9","secondary_identifiers":["MEDGEN:481882","GARD:15781","OMIM:614237","UMLS:C3280252"],"synonyms":[{"name":"HYPT9","type":"exact"},{"name":"hypotrichosis 9","type":"exact"},{"name":"hypotrichosis type 9","type":"exact"},{"name":"hypt9","type":"exact"}],"termid":"MONDO:0013649","xrefs":{"Monarch":{"xref_id":"0013649"}}}


id: GO:0018530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-6-hydroxynicotine + H2O + O2 = 6-hydroxypseudooxynicotine + H2O2.","definition_xrefs":["EC:1.5.3.6","RHEA:10012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(R)-6-hydroxynicotine oxidase activity","secondary_identifiers":["MetaCyc:R-6-HYDROXYNICOTINE-OXIDASE-RXN","UM-BBD_reactionID:r0477","KEGG_REACTION:R07170"],"synonyms":[{"name":"(R)-6-hydroxynicotine:oxygen oxidoreductase activity","type":"related"},{"name":"6-hydroxy-D-nicotine oxidase activity","type":"exact"},{"name":"D-6-hydroxynicotine oxidase activity","type":"related"}],"termid":"GO:0018530"}


id: GO:0071478
data:
  {"annotated_genes":["SJAG_01648","SJAG_00272","SJAG_00208","SJAG_02818","SJAG_02860","SJAG_00814","SJAG_04190","SJAG_02182","SJAG_04150","SJAG_01262","SJAG_00729","SJAG_01010","SJAG_02199","SJAG_04877","SJAG_03898","SJAG_05197","SJAG_00863","SJAG_02334","SJAG_02200","SJAG_02828","SJAG_05242"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[119174,119173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[102620,76749,95028,108902],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[112621,105745,95809,96921,68495,69901,66228,93463,104023,75513,64624,67363,60141,65572,87801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to radiation","termid":"GO:0009314"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to radiation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:23873862":null},"synonyms":[{"name":"cellular response to electromagnetic radiation stimulus","type":"exact"},{"name":"cellular response to radiation stimulus","type":"exact"}],"termid":"GO:0071478","terms_by_termid":{"GO:0009785":null,"GO:0070914":null,"GO:0071483":null,"GO:1904161":null}}


id: GO:0044181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a multicellular organism grows in a threadlike, filamentous shape.","definition_xrefs":["GOC:mtg_cambridge_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth","termid":"GO:0030447"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a multicellular organism","termid":"GO:0044181"}


id: FYPO:0004971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to stress measured in a cell is lower than normal (i.e. lower than observed in wild-type cells during vegetative growth) during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of stress responsive gene mRNA during vegetative growth","termid":"FYPO:0005908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of stress responsive gene mRNA during cellular response to phosphate starvation","synonyms":[{"name":"decreased level of cellular response to stress gene mRNA during cellular response to phosphate starvation","type":"exact"},{"name":"decreased level of stress responsive gene RNA during cellular response to phosphate starvation","type":"exact"},{"name":"decreased level of stress responsive gene mRNA during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"decreased level of stress responsive gene mRNA during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"decreased level of stress responsive gene transcripts during cellular response to phosphate starvation","type":"exact"},{"name":"decreased mRNA level of stress responsive genes during cellular response to phosphate starvation","type":"exact"},{"name":"decreased stress responsive gene mRNA accumulation during cellular response to phosphate starvation","type":"related"},{"name":"reduced level of stress responsive gene mRNA during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0004971"}


id: FYPO:0007522
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119318],"is_not":false,"summary":null,"term":"FYPO:0007522"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of tacrolimus and magnesium chloride. Cells stop growing (and may die) at concentrations of tacrolimus and magnesium chloride that allow wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:19625445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to tacrolimus and magnesium chloride","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"inviable in the presence of FK506 and chloride","type":"exact"},{"name":"sensitive to FK506 and magnesium chloride","type":"exact"},{"name":"sensitive to magnesium chloride and FK506","type":"exact"},{"name":"sensitive to magnesium chloride and tacrolimus","type":"exact"},{"name":"sensitive to tacrolimus and MgCl2","type":"exact"},{"name":"sensitive to tacrolimus and magnesium chloride during mitotic cell cycle","type":"related"},{"name":"sensitive to tacrolimus and magnesium chloride during vegetative growth","type":"exact"},{"name":"vic-negative","type":"related"}],"termid":"FYPO:0007522","terms_by_termid":{"FYPO:0007522":null,"FYPO_EXT:0000001":null}}


id: PBO:0088226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neddylation protein Dcn1","termid":"PBO:0088226"}


id: PR:Q09714
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.08c","synonyms":[{"name":"Spom972h-SPAC18B11.08c","type":"exact"}],"termid":"PR:Q09714"}


id: GO:0044341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore, by a mechanism dependent upon sodium ions.","definition_xrefs":["GOC:BHF","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate ion transport","termid":"GO:0006817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"sodium-dependent phosphate transport","termid":"GO:0044341"}


id: PBO:0078640
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triple QxxK/R motif containing","termid":"PBO:0078640"}


id: GO:0046943
data:
  {"annotated_genes":["SJAG_00232","SJAG_04718","SJAG_00522","SJAG_05325","SJAG_01406","SJAG_01505","SJAG_00626","SJAG_03899","SJAG_04637","SJAG_02029","SJAG_05175","SJAG_00275","SJAG_04905","SJAG_02140","SJAG_04984","SJAG_04593","SJAG_00276","SJAG_01960","SJAG_00543","SJAG_04295","SJAG_04725","SJAG_03400","SJAG_04588","SJAG_03256","SJAG_04706","SJAG_02780","SJAG_01872","SJAG_00671","SJAG_02779","SJAG_03503","SJAG_03644","SJAG_01924"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70837,79628,79691,87250],"is_not":false,"summary":null,"term":"GO:0046943"},{"annotations":[78530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015123"},{"annotations":[96357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015139"},{"annotations":[71602,79083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[72305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[75115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[71601,79082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901604"},{"annotations":[73665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[92289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015128"},{"annotations":[69719,77552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[88203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034658"},{"annotations":[95817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[78916,97154,100162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[102596,109823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[96358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[96359,98026,78911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[78909,97155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[102597,109824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[102598,78913,109825,97156,100163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[107703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[100155,101016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[90411,78914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[78910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"},{"annotations":[67272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[101456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[101457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901239"},{"annotations":[88204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[72251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[76404,93143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089721"},{"annotations":[76759,94189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050833"},{"annotations":[101459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[112059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"}]},"cv_name":"molecular_function","definition":"Enables the transfer of carboxylic acids from one side of a membrane to the other. Carboxylic acids are organic acids containing one or more carboxyl (COOH) groups or anions (COO-).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid transmembrane transporter activity","termid":"GO:0005342"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_00275":null,"SJAG_00276":null,"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_01505":null,"SJAG_01872":null,"SJAG_01924":null,"SJAG_01960":null,"SJAG_02029":null,"SJAG_02140":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03503":null,"SJAG_03644":null,"SJAG_03899":null,"SJAG_04295":null,"SJAG_04588":null,"SJAG_04593":null,"SJAG_04637":null,"SJAG_04706":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04905":null,"SJAG_04984":null,"SJAG_05175":null,"SJAG_05325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"carboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-390347"],"termid":"GO:0046943","terms_by_termid":{"GO:0000064":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0005371":null,"GO:0008517":null,"GO:0015123":null,"GO:0015128":null,"GO:0015131":null,"GO:0015139":null,"GO:0015140":null,"GO:0015182":null,"GO:0015183":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0015225":null,"GO:0015233":null,"GO:0015366":null,"GO:0033229":null,"GO:0034639":null,"GO:0034658":null,"GO:0046943":null,"GO:0050833":null,"GO:0061459":null,"GO:0071913":null,"GO:0089721":null,"GO:0097434":null,"GO:1901239":null,"GO:1901604":null}}


id: GO:0055054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fructose + H+ = fructose + H+.","definition_xrefs":["GOC:ct"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"fructose:proton symporter activity","synonyms":[{"name":"fructose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0055054"}


id: GO:0046461
data:
  {"annotated_genes":["SJAG_03604","SJAG_01036","SJAG_02100","SJAG_02543","SJAG_02089"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74195],"is_not":false,"summary":null,"term":"GO:0046461"},{"annotations":[98268,71171,117381,91689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of neutral lipids, lipids only soluble in solvents of very low polarity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral lipid metabolic process","termid":"GO:0006638"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02100":null,"SJAG_02543":null,"SJAG_03604":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"neutral lipid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"neutral lipid breakdown","type":"exact"},{"name":"neutral lipid catabolism","type":"exact"},{"name":"neutral lipid degradation","type":"exact"}],"termid":"GO:0046461","terms_by_termid":{"GO:0019433":null,"GO:0046461":null}}


id: PBO:0044668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylarginine dimethylaminohydrolase 1","termid":"PBO:0044668"}


id: GO:0008875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + NADP+ = dehydro-D-gluconate + NADPH + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gluconate dehydrogenase activity","termid":"GO:0008875"}


id: PR:Q9Y7Z2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ADP-ribosylation factor 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.08","secondary_identifiers":["UniProtKB:Q9Y7Z2"],"synonyms":[{"name":"Spom972h-ARF6","type":"exact"}],"termid":"PR:Q9Y7Z2"}


id: PBO:0054757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2168","termid":"PBO:0054757"}


id: PBO:0069379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 639, pseudogene","termid":"PBO:0069379"}


id: PBO:0026799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_proteasome_core_complex_binding","termid":"PBO:0026799"}


id: GO:0019359
data:
  {"annotated_genes":["SJAG_03298","SJAG_02889","SJAG_01582","SJAG_01359","SJAG_00957","SJAG_02618","SJAG_01500","SJAG_04693","SJAG_01566","SJAG_03946"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70483,90444,112879,90866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[74427,77282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[79937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[70867,79663,77738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide nucleotides, any nucleotide that contains combined nicotinamide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleotide biosynthetic process","termid":"GO:0019363"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_03946":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nicotinamide nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nicotinamide nucleotide anabolism","type":"exact"},{"name":"nicotinamide nucleotide biosynthesis","type":"exact"},{"name":"nicotinamide nucleotide formation","type":"exact"},{"name":"nicotinamide nucleotide synthesis","type":"exact"}],"termid":"GO:0019359","terms_by_termid":{"GO:0006741":null,"GO:0009435":null,"GO:0034355":null,"GO:0034356":null}}


id: MONDO:0005463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Calcification of the aortic valve","definition_xrefs":["EFO:0005239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic valve disorder","termid":"MONDO:0003803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve calcification","secondary_identifiers":["UMLS:C0428791","SCTID:250978003","HP:0004380","MEDGEN:140899"],"synonyms":[{"name":"aortic valve calcification","type":"exact"},{"name":"aortic valve calcification (disease)","type":"exact"}],"termid":"MONDO:0005463","xrefs":{"Monarch":{"xref_id":"0005463"}}}


id: PBO:0040923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basonuclin 1","termid":"PBO:0040923"}


id: MONDO:0025478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumors most commonly seen on or near the genitalia. They are venereal, most likely transmitted through transplantation of cells by contact. Metastases have been reported. Spontaneous regression may occur.","definition_xrefs":["MESH:D014685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"venereal tumors, veterinary","synonyms":[{"name":"transmissible venereal tumor","type":"related"},{"name":"transmissible venereal tumors","type":"related"},{"name":"transmissible venereal tumour","type":"related"},{"name":"transmissible venereal tumours","type":"related"},{"name":"tumor, transmissible venereal","type":"related"},{"name":"tumor, veterinary venereal","type":"related"},{"name":"tumors, transmissible venereal","type":"related"},{"name":"tumors, veterinary venereal","type":"related"},{"name":"venereal tumor, transmissible","type":"related"},{"name":"venereal tumor, veterinary","type":"related"},{"name":"venereal tumors, transmissible","type":"related"},{"name":"veterinary venereal tumor","type":"related"},{"name":"veterinary venereal tumors","type":"related"},{"name":"veterinary venereal tumour","type":"related"},{"name":"veterinary venereal tumours","type":"related"}],"termid":"MONDO:0025478","xrefs":{"Monarch":{"xref_id":"0025478"}}}


id: PBO:0049384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIC subunit 6","termid":"PBO:0049384"}


id: PBO:0074416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM15 pseudogene 1","termid":"PBO:0074416"}


id: PBO:0091742
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe CREA homolog","termid":"PBO:0091742"}


id: MONDO:0001455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral retinal degeneration","termid":"MONDO:0001451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal lattice degeneration","secondary_identifiers":["ICD9:362.63","SCTID:3577000","UMLS:C0154856","DOID:12165","MEDGEN:102321"],"synonyms":[{"name":"palisade degeneration of retina","type":"exact"}],"termid":"MONDO:0001455","xrefs":{"Monarch":{"xref_id":"0001455"}}}


id: PBO:0082358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy receptor with a role in degradation of the ER and nucleus; involved specifically in autophagy of perinuclear endoplasmic reticulum in response to nitrogen starvation or rapamycin treatment; localizes to the perinuclear ER","termid":"PBO:0082358"}


id: PBO:0049543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2BC6 antisense RNA 1","termid":"PBO:0049543"}


id: PATO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001076 relative momentum (obsolete PATO:0001076)","termid":"PATO:0001076"}


id: PBO:0057461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 580","termid":"PBO:0057461"}


id: GO:0045190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic recombination of immunoglobulin genes involved in immune response","termid":"GO:0002204"},{"relation_name":"is_a","term_name":"B cell activation involved in immune response","termid":"GO:0002312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"isotype switching","secondary_identifiers":["Wikipedia:Immunoglobulin_class_switching"],"synonyms":[{"name":"class switch recombination","type":"exact"},{"name":"class switching","type":"exact"},{"name":"isotype switch recombination","type":"exact"}],"termid":"GO:0045190"}


id: SO:0000768
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid that may integrate with a chromosome.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid","termid":"SO:0000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episome","termid":"SO:0000768"}


id: GO:1902074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salt stimulus.","definition_xrefs":["GOC:mls","GOC:TermGenie","PMID:16666921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to salt","synonyms":[{"name":"response to salinity","type":"narrow"}],"termid":"GO:1902074"}


id: PBO:0116578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Winged helix repair factor Whr1","termid":"PBO:0116578"}


id: PBO:0061775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obscurin like cytoskeletal adaptor 1","termid":"PBO:0061775"}


id: GO:1904104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of convergent extension involved in gastrulation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:dph","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of convergent extension involved in gastrulation","synonyms":[{"name":"down regulation of convergent extension involved in gastrulation","type":"exact"},{"name":"down-regulation of convergent extension involved in gastrulation","type":"exact"},{"name":"downregulation of convergent extension involved in gastrulation","type":"exact"},{"name":"inhibition of convergent extension involved in gastrulation","type":"narrow"}],"termid":"GO:1904104"}


id: MONDO:0022908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutis gyratum acanthosis nigricans craniosynostosis","termid":"MONDO:0022908","xrefs":{"Monarch":{"xref_id":"0022908"}}}


id: GO:0100018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates glucose import.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucose import by transcription from RNA polymerase II promoter (obsolete GO:0100018)","termid":"GO:0100018"}


id: MONDO:0004022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the superior sagittal sinus and invades the parasagittal angle.","definition_xrefs":["NCIT:C4960"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebral convexity meningioma","termid":"MONDO:0003774"},{"relation_name":"is_a","term_name":"cerebral meningioma","termid":"MONDO:0003772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"parasagittal meningioma","secondary_identifiers":["DOID:6869","MEDGEN:155845","UMLS:C0751304"],"termid":"MONDO:0004022","xrefs":{"Monarch":{"xref_id":"0004022"}}}


id: PBO:0071596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 13","termid":"PBO:0071596"}


id: GO:0031009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ADPG pyrophosphorylase complex found in a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotetrameric ADPG pyrophosphorylase complex","termid":"GO:0030931"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"plastid ADPG pyrophosphorylase complex","termid":"GO:0031009"}


id: PBO:0054054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1396","termid":"PBO:0054054"}


id: MONDO:0019034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Accessory pancreas is an asymptomatic embryopathy characterized by the presence of pancreatic tissue in other sites of the body such as the splenic pedicle, gonadic pedicles, intestinal mesentery, duodenum wall, upper jejunum, or, more rarely, the gastric wall, ileum, gallbladder or spleen.","definition_xrefs":["Orphanet:674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"accessory pancreas","secondary_identifiers":["MESH:C536003","GARD:454","SCTID:79037006","UMLS:C0266268","MEDGEN:82737","icd11.foundation:240534435"],"synonyms":[{"name":"pancreas accessorium","type":"related"}],"termid":"MONDO:0019034","xrefs":{"Monarch":{"xref_id":"0019034"}}}


id: MONDO:0003626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare serous adenocarcinoma that arises from the uterine ligament.","definition_xrefs":["NCIT:C40136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine ligament adenocarcinoma","termid":"MONDO:0002741"},{"relation_name":"is_a","term_name":"cervical serous adenocarcinoma","termid":"MONDO:0003631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine ligament serous adenocarcinoma","secondary_identifiers":["MEDGEN:275561","UMLS:C1519872","DOID:5747"],"synonyms":[{"name":"uterine ligament serous adenocarcinoma","type":"exact"}],"termid":"MONDO:0003626","xrefs":{"Monarch":{"xref_id":"0003626"}}}


id: PBO:0076295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse differentiation inducing 1 like","termid":"PBO:0076295"}


id: PBO:0088396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase family Adi1","termid":"PBO:0088396"}


id: GO:0021913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results in the commitment of a cell to become an interneuron in the ventral spinal cord.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","PMID:11262869","GO_REF:0000021","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification (obsolete GO:0021913)","termid":"GO:0021913"}


id: GO:0008342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Feeding behavior in an insect larva.","definition_xrefs":["GOC:jid","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete larval feeding behavior (sensu Insecta) (obsolete GO:0008342)","synonyms":[{"name":"larval feeding behavior (sensu Insecta)","type":"exact"}],"termid":"GO:0008342"}


id: GO:0062159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane-bounded organelle of eukaryotic cells, especially Protozoa, that fills with water from the cytoplasm and then discharges this externally. One of its functions is osmoregulatory.","definition_xrefs":["PMID:23890380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"contractile vacuole complex","synonyms":[{"name":"CVC","type":"related"}],"termid":"GO:0062159"}


id: PBO:0029827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vacuolated_vegetative_cell,_abnormal_cell_shape,_normal_cell_size","termid":"PBO:0029827"}


id: MONDO:0030846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 48","secondary_identifiers":["GARD:16420","DOID:0112176","MEDGEN:1761843","OMIM:619108","UMLS:C5436823"],"synonyms":[{"name":"SPGF48","type":"exact"},{"name":"spermatogenic failure 48","type":"exact"}],"termid":"MONDO:0030846","xrefs":{"Monarch":{"xref_id":"0030846"}}}


id: GO:0099096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The giant, cup-shaped axon terminal of a vestibular afferent neuron, serving as a post-synaptic contact to a type I hair cell.","definition_xrefs":["PMID:25355208","PMID:10706428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vestibular calyx terminal","termid":"GO:0099096"}


id: PATO:0010000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in the bearer by virtue of the bearer consisting of a single, maximally connected structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maximally connected","termid":"PATO:0010000"}


id: GO:0120541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification, often by sulfation, of sugars in the polysaccharide chain component of dermatan sulfate proteoglycans.","definition_xrefs":["PMID:38500384"],"gene_count":0,"genotype_count":0,"name":"obsolete dermatan sulfate proteoglycan biosynthetic process, enzymatic modification (obsolete GO:0120541)","termid":"GO:0120541"}


id: FYPO:0006034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, morphology, or other physical characteristic of the mitochondrion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitochondrion","synonyms":[{"name":"normal mitochondria","type":"exact"},{"name":"normal mitochondrion during mitotic cell cycle","type":"related"},{"name":"normal mitochondrion during vegetative growth","type":"exact"}],"termid":"FYPO:0006034"}


id: GO:1903973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to macrophage colony-stimulating factor stimulus.","definition_xrefs":["GO_REF:0000058","GOC:nc","PMID:19100238","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to macrophage colony-stimulating factor","termid":"GO:1903970"},{"relation_name":"is_a","term_name":"regulation of cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:1903972"},{"relation_name":"negatively_regulates","term_name":"cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:0036006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to macrophage colony-stimulating factor stimulus","synonyms":[{"name":"down regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"down regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"down regulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"down-regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"down-regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"down-regulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"downregulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"downregulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"downregulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"inhibition of cellular response to M-CSF stimulus","type":"narrow"},{"name":"inhibition of cellular response to macrophage colony-stimulating factor","type":"narrow"},{"name":"inhibition of cellular response to macrophage colony-stimulating factor stimulus","type":"narrow"},{"name":"negative regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"negative regulation of cellular response to macrophage colony-stimulating factor","type":"exact"}],"termid":"GO:1903973"}


id: MONDO:0010535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bazex-Dupre-Christol syndrome is a rare genodermatosis (hereditary skin disease) with a predisposition to early-onset basal cell carcinomas.","definition_xrefs":["Orphanet:113"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited skin tumor (obsolete MONDO:0015950)","termid":"MONDO:0015950"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"excluded_subClassOf","term_name":"obsolete malignant tumor of palpebral epidermis (obsolete MONDO:0020175)","termid":"MONDO:0020175"},{"relation_name":"excluded_subClassOf","term_name":"obsolete congenital absence of the eyebrow/eyelashes (obsolete MONDO:0020188)","termid":"MONDO:0020188"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Bazex-Dupre-Christol syndrome","secondary_identifiers":["MEDGEN:87539","GARD:838","OMIM:301845","ICD9:757.39","SCTID:238640007","UMLS:C0346104","SCTID:254820002","Orphanet:166113"],"synonyms":[{"name":"BDCS","type":"exact"},{"name":"BZX","type":"related"},{"name":"Bazex syndrome","type":"exact"},{"name":"Bazex syndrome, X-linked dominant","type":"exact"},{"name":"Bazex-Dupre-Christol syndrome","type":"exact"},{"name":"Bazex-Dupré-Christol syndrome","type":"exact"},{"name":"acrokeratosis of Bazex","type":"exact"},{"name":"acrokeratosis paraneoplastica","type":"exact"},{"name":"acrokeratosis paraneoplastica of Bazex","type":"exact"},{"name":"follicular atrophoderma and basal cell carcinomas","type":"exact"},{"name":"follicular atrophoderma-basal cell carcinoma syndrome","type":"related"},{"name":"follicular atrophoderma-basocellular proliferations-hypotrichosis syndrome","type":"related"}],"termid":"MONDO:0010535","xrefs":{"Monarch":{"xref_id":"0010535"}}}


id: GO:0045150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetoin, 3-hydroxy-2-butanone.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"acetoin metabolic process","termid":"GO:0045149"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"acetoin catabolic process","synonyms":[{"name":"acetoin breakdown","type":"exact"},{"name":"acetoin catabolism","type":"exact"},{"name":"acetoin degradation","type":"exact"}],"termid":"GO:0045150"}


id: MONDO:0008498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strabismus, susceptibility to","secondary_identifiers":["UMLS:C1861449","OMIM:185100","MEDGEN:350026"],"synonyms":[{"name":"strabismus, susceptibility to","type":"exact"},{"name":"strabismus, susceptibility to, 1","type":"related"}],"termid":"MONDO:0008498","xrefs":{"Monarch":{"xref_id":"0008498"}}}


id: GO:0060567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of DNA-dependent transcription termination, the process in which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA.","definition_xrefs":["GOC:tb","GOC:dph","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of termination of DNA-templated transcription","termid":"GO:0031554"},{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex disassembly","termid":"GO:0043242"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"negatively_regulates","term_name":"DNA-templated transcription termination","termid":"GO:0006353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of termination of DNA-templated transcription","synonyms":[{"name":"negative regulation of DNA-dependent transcription, termination","type":"exact"},{"name":"negative regulation of DNA-templated transcription, termination","type":"exact"},{"name":"negative regulation of termination of DNA-dependent transcription","type":"exact"},{"name":"negative regulation of transcription termination, DNA-dependent","type":"exact"}],"termid":"GO:0060567"}


id: PATO:0001456
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's independence on oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity to oxygen","termid":"PATO:0001454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic","termid":"PATO:0001456"}


id: MONDO:0002836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A transitional cell carcinoma that arises from the male or female urethra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma of urethra","termid":"MONDO:0021327"},{"relation_name":"is_a","term_name":"urothelial carcinoma","termid":"MONDO:0040679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urethra transitional cell carcinoma","secondary_identifiers":["DOID:4013","NCIT:C6166","UMLS:C0863015","MEDGEN:167840","ONCOTREE:UCU"],"synonyms":[{"name":"UCU","type":"related"},{"name":"transitional cell carcinoma of the urethra","type":"exact"},{"name":"transitional cell carcinoma of urethra","type":"exact"},{"name":"urethra transitional cell carcinoma","type":"exact"},{"name":"urethral transitional cell carcinoma","type":"exact"},{"name":"urethral urothelial cancer","type":"exact"},{"name":"urethral urothelial carcinoma","type":"exact"}],"termid":"MONDO:0002836","xrefs":{"Monarch":{"xref_id":"0002836"}}}


id: GO:0046978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the TAP1 subunit of TAP (transporter associated with antigen processing) protein.","definition_xrefs":["PMID:11133832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TAP binding","termid":"GO:0046977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TAP1 binding","termid":"GO:0046978"}


id: PBO:0040355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 4","termid":"PBO:0040355"}


id: MONDO:0004075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign tumor, composed of lobules of mature adipocytes, that penetrates the surrounding tissue from which it arises. There is usually a higher local recurrence rate when compared with non-infiltrating lipomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infiltrating lipoma","secondary_identifiers":["DOID:7014","MEDGEN:90788","NCIT:C7451","NCIT:C7450","UMLS:C0334473"],"synonyms":[{"name":"intramuscular lipoma","type":"exact"},{"name":"intramuscular lipoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004075","xrefs":{"Monarch":{"xref_id":"0004075"}}}


id: PBO:0040086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase F pseudogene 1","termid":"PBO:0040086"}


id: GO:0160019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of platelet rolling.","definition_xrefs":["GOC:sl","GO_REF:0000058","PMID:15738422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heterotypic cell-cell adhesion","termid":"GO:0034115"},{"relation_name":"is_a","term_name":"regulation of platelet rolling","termid":"GO:0160017"},{"relation_name":"negatively_regulates","term_name":"platelet rolling","termid":"GO:0160015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of platelet rolling","termid":"GO:0160019"}


id: PBO:0050888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-L-iduronidase","termid":"PBO:0050888"}


id: PBO:0108580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase Jmj4","termid":"PBO:0108580"}


id: MOD:00334
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between the tele nitrogen of a histidine residue and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["PubMed:12033922","PubMed:12121092","Unimod:390#H","RESID:AA0329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-heme-L-histidine","synonyms":[{"name":"(S)-[7-ethenyl-12-[1-((2-amino-2-carboxyethyl)-1H-imidazol-1-yl)ethyl]-3,8,13,17-tetramethyl-21H,23H-porphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"1'-heme-L-histidine","type":"exact"},{"name":"2-[1-(N1'-histidyl)ethyl]protoporphyrin IX","type":"exact"},{"name":"BINDING Heme (covalent; via tele nitrogen)","type":"exact"},{"name":"Heme","type":"related"},{"name":"N(epsilon)-histidyl heme","type":"exact"},{"name":"N(tau)-histidyl heme","type":"exact"},{"name":"N1'-histidyl heme","type":"exact"},{"name":"heme","type":"related"},{"name":"tele-histidyl heme","type":"exact"}],"termid":"MOD:00334"}


id: FYPO:0001113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which the cellular response to a pheromone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus","termid":"FYPO:0000953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000298"],"is_obsolete":false,"name":"normal cellular response to pheromone","termid":"FYPO:0001113"}


id: GO:0043821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + propionyl-CoA = succinyl-CoA + propionate.","definition_xrefs":["PMID:10769117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"propionyl-CoA:succinate CoA-transferase activity","secondary_identifiers":["MetaCyc:RXN0-268","RHEA:28010"],"synonyms":[{"name":"propionyl-CoA succinate CoA-transferase activity","type":"exact"},{"name":"propionyl-CoA:succinate CoA transferase activity","type":"exact"}],"termid":"GO:0043821"}


id: MONDO:0042496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Poisoning caused by ingesting ergotized grain or by the misdirected or excessive use of ergot as a medicine.","definition_xrefs":["MESH:D004881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxicosis","termid":"MONDO:0042497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ergotism","secondary_identifiers":["icd11.foundation:1013848192","SCTID:51510002","ICD9:988.2"],"synonyms":[{"name":"Saint Anthony fire","type":"related"},{"name":"Saint Anthony's fire","type":"related"},{"name":"Saint Anthonys fire","type":"related"},{"name":"St Anthony's fire","type":"related"},{"name":"St. Anthony fire","type":"related"},{"name":"St. Anthony's fire","type":"related"},{"name":"St. Anthonys fire","type":"related"},{"name":"ergot poisoning","type":"related"},{"name":"ergot poisonings","type":"related"},{"name":"ergotism","type":"exact"},{"name":"ergotisms","type":"related"},{"name":"fire, St. Anthonys","type":"related"},{"name":"poisoning, ergot","type":"related"},{"name":"poisonings, ergot","type":"related"}],"termid":"MONDO:0042496","xrefs":{"Monarch":{"xref_id":"0042496"}}}


id: GO:1902038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hematopoietic stem cell differentiation.","definition_xrefs":["GOC:TermGenie","PMID:23403623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901534"},{"relation_name":"is_a","term_name":"regulation of hematopoietic stem cell differentiation","termid":"GO:1902036"},{"relation_name":"is_a","term_name":"positive regulation of stem cell differentiation","termid":"GO:2000738"},{"relation_name":"positively_regulates","term_name":"hematopoietic stem cell differentiation","termid":"GO:0060218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hematopoietic stem cell differentiation","synonyms":[{"name":"activation of haematopoietic stem cell differentiation","type":"narrow"},{"name":"activation of haemopoietic stem cell differentiation","type":"narrow"},{"name":"activation of hematopoietic stem cell differentiation","type":"narrow"},{"name":"activation of hemopoietic stem cell differentiation","type":"narrow"},{"name":"positive regulation of haematopoietic stem cell differentiation","type":"exact"},{"name":"positive regulation of haemopoietic stem cell differentiation","type":"exact"},{"name":"positive regulation of hemopoietic stem cell differentiation","type":"exact"},{"name":"up regulation of haematopoietic stem cell differentiation","type":"exact"},{"name":"up regulation of haemopoietic stem cell differentiation","type":"exact"},{"name":"up regulation of hematopoietic stem cell differentiation","type":"exact"},{"name":"up regulation of hemopoietic stem cell differentiation","type":"exact"},{"name":"up-regulation of haematopoietic stem cell differentiation","type":"exact"},{"name":"up-regulation of haemopoietic stem cell differentiation","type":"exact"},{"name":"up-regulation of hematopoietic stem cell differentiation","type":"exact"},{"name":"up-regulation of hemopoietic stem cell differentiation","type":"exact"},{"name":"upregulation of haematopoietic stem cell differentiation","type":"exact"},{"name":"upregulation of haemopoietic stem cell differentiation","type":"exact"},{"name":"upregulation of hematopoietic stem cell differentiation","type":"exact"},{"name":"upregulation of hemopoietic stem cell differentiation","type":"exact"}],"termid":"GO:1902038"}


id: MONDO:0003871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metanephric adenoma (obsolete MONDO:0003871)","termid":"MONDO:0003871","xrefs":{"Monarch":{"xref_id":"0003871"}}}


id: GO:0075028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent symbiont appressorium initiation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of appressorium initiation (obsolete GO:0075028)","synonyms":[{"name":"negative regulation of appressorium initiation on or near host","type":"related"},{"name":"negative regulation of initiation of appressorium on or near host","type":"exact"}],"termid":"GO:0075028"}


id: GO:0016980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: creatine + H2O = sarcosine + urea.","definition_xrefs":["RHEA:22456","EC:3.5.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"creatinase activity","secondary_identifiers":["MetaCyc:CREATINASE-RXN","KEGG_REACTION:R01566"],"synonyms":[{"name":"creatine amidinohydrolase activity","type":"related"}],"termid":"GO:0016980"}


id: PBO:0062455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 128 pseudogene","termid":"PBO:0062455"}


id: GO:0140302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interactions (or cell to cell communication) that occur between the male gametophyte (pollen/pollen tube) and the stylar tissues of the female sporophyte.","definition_xrefs":["PMID:27899537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen-style interaction","termid":"GO:0140302"}


id: PBO:0089054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor 2 (EF-2) Eft2","termid":"PBO:0089054"}


id: PBO:0027587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_sister_chromatid_cohesion_along_chromosome_arms","termid":"PBO:0027587"}


id: SO:0002228
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant extending the CDS at the 5' end, that causes elongation of the resulting polypeptide sequence at the N terminus.","definition_xrefs":["PMID:14732127","PMID:15864293","PMID:31216041","PMID:27984720","PMID:32020195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_extension","termid":"SO:0002227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_five_prime_extension","synonyms":[{"name":"CDS Extension 5 prime","type":"exact"},{"name":"CDS Extension five prime","type":"exact"},{"name":"elongated CDS five prime","type":"exact"},{"name":"elongated_CDS_five_prime","type":"exact"}],"termid":"SO:0002228"}


id: GO:0034947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: terephthalate + H2O = benzoate + HCO3-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete terephthalate decarboxylase activity (obsolete GO:0034947)","termid":"GO:0034947"}


id: PBO:0029752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_modification","termid":"PBO:0029752"}


id: PBO:0066546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 9 binding protein","termid":"PBO:0066546"}


id: PBO:0052492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 6","termid":"PBO:0052492"}


id: PBO:0076079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin interacting protein 1","termid":"PBO:0076079"}


id: GO:0150006
data:
  {"annotated_genes":["SJAG_04679","SJAG_05338","SJAG_04896"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95213,96617,118788],"is_not":false,"summary":null,"term":"GO:0150006"}]},"cv_name":"cellular_component","definition":"A protein complex required for the activation of urease. Activator subunits dissociate before urease has catalytic function.","definition_xrefs":["PMID:28710280","PMID:16244137","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator complex","termid":"GO:0150005"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"urease activator complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0150006","terms_by_termid":{"GO:0150006":null}}


id: GO:0008020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with incidental electromagnetic radiation, particularly visible light, and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:dph","ISBN:0198506732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"photoreceptor activity","termid":"GO:0009881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled photoreceptor activity","secondary_identifiers":["GO:0004975"],"synonyms":[{"name":"G protein coupled photoreceptor activity","type":"exact"},{"name":"G-protein coupled photoreceptor activity","type":"exact"},{"name":"photoreceptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0008020"}


id: MONDO:0004627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute or chronic inflammation of the duodenum. Causes include bacterial and viral infections and gastroesophageal reflux disease. Symptoms include vomiting and abdominal pain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duodenal disorder","termid":"MONDO:0002866"},{"relation_name":"is_a","term_name":"enteritis","termid":"MONDO:0043579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenitis","secondary_identifiers":["NCIT:C94409","MESH:D004382","UMLS:C0013298","MEDGEN:4419","icd11.foundation:1595026136","ICD9:535.60","ICD9:535.6","ICD10CM:K29.8","DOID:8643","SCTID:72007001"],"synonyms":[{"name":"duodenitis","type":"exact"},{"name":"duodenum inflammation","type":"exact"},{"name":"hemorrhagic duodenitis","type":"narrow"},{"name":"inflammation of duodenum","type":"exact"}],"termid":"MONDO:0004627","xrefs":{"Monarch":{"xref_id":"0004627"}}}


id: MONDO:0020189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eyebrow/eyelashes structural anomaly (obsolete MONDO:0020189)","secondary_identifiers":["Orphanet:98599"],"termid":"MONDO:0020189","xrefs":{"Monarch":{"xref_id":"0020189"}}}


id: PBO:0030166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_swollen_cell","termid":"PBO:0030166"}


id: PBO:0068146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 453","termid":"PBO:0068146"}


id: PBO:0065913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGAP1L intronic transcript 1","termid":"PBO:0065913"}


id: PBO:0005743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Npp106","termid":"PBO:0005743"}


id: PBO:0072542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 72","termid":"PBO:0072542"}


id: MONDO:0007974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant condition caused by mutation(s) in the MBD5 gene, encoding methyl-CpG-binding domain protein 5. It is characterized by severe developmental and cognitive delay, short stature, craniofacial dysmorphism, and seizures.","definition_xrefs":["NCIT:C141424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 1","secondary_identifiers":["GARD:18623","OMIM:156200","DOID:0070031","MESH:C566947","UMLS:C1969562","MEDGEN:409857"],"synonyms":[{"name":"MBD5 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD1","type":"exact"},{"name":"autosomal dominant intellectual disability 1","type":"exact"},{"name":"autosomal dominant mental retardation 1","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 1","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in MBD5","type":"exact"},{"name":"chromosome 2Q23.1 deletion syndrome","type":"related"},{"name":"intellectual disability, autosomal dominant 1","type":"exact"},{"name":"intellectual disability, autosomal dominant type 1","type":"exact"},{"name":"mental retardation, autosomal dominant 1","type":"related"},{"name":"mental retardation, autosomal dominant type 1","type":"exact"}],"termid":"MONDO:0007974","xrefs":{"Monarch":{"xref_id":"0007974"}}}


id: FYPO:0008309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell divides with a greater surface area than normal (i.e. compared to wild-type cells under the same conditions).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable swollen vegetative cell","termid":"FYPO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cell surface area at division","termid":"FYPO:0008309"}


id: MONDO:0012043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reis-Bücklers corneal dystrophy (RBCD), also known as granular corneal dystrophy type III, is a rare form of superficial corneal dystrophy characterized by bilateral symmetrical reticular opacities in the superficial central cornea, with progressive visual impairment.","definition_xrefs":["Orphanet:98961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-stromal TGFBI dystrophy","termid":"MONDO:0000764"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Reis-Bucklers corneal dystrophy","secondary_identifiers":["OMIM:608470","DOID:0060453","UMLS:C0339278","GARD:9276","ICD9:371.52","MESH:C535476","SCTID:231930000","MEDGEN:83284"],"synonyms":[{"name":"CDB1","type":"related"},{"name":"CDRB","type":"related"},{"name":"RBCD","type":"exact"},{"name":"Reis Bucklers corneal dystrophy","type":"related"},{"name":"Reis Bucklers dystrophy","type":"related"},{"name":"Reis-Bucklers corneal dystrophy","type":"exact"},{"name":"Reis-Bücklers corneal dystrophy","type":"related"},{"name":"anterior limiting membrane dystrophy type 1","type":"exact"},{"name":"anterior limiting membrane dystrophy type I","type":"exact"},{"name":"atypical granular corneal dystrophy","type":"exact"},{"name":"corneal dystrophy Reis Bucklers type","type":"related"},{"name":"corneal dystrophy geographic","type":"related"},{"name":"corneal dystrophy of Bowman Layer, type 1","type":"related"},{"name":"corneal dystrophy of Bowman layer type 1","type":"exact"},{"name":"corneal dystrophy of Bowman layer type I","type":"exact"},{"name":"corneal dystrophy, REIS-Bucklers type","type":"related"},{"name":"corneal dystrophy, geographic","type":"related"},{"name":"geographic corneal dystrophy","type":"exact"},{"name":"granular corneal dystrophy type 3","type":"exact"},{"name":"granular corneal dystrophy type III","type":"exact"},{"name":"granular corneal dystrophy, type 3","type":"related"},{"name":"superficial granular corneal dystrophy","type":"exact"}],"termid":"MONDO:0012043","xrefs":{"Monarch":{"xref_id":"0012043"}}}


id: MONDO:0019205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The association of amelogenesis imperfecta and a microscopically typical hair dysplasia has been found in several members of a family in two generations. Transmission is X-linked.","definition_xrefs":["Orphanet:79129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichodysplasia-amelogenesis imperfecta syndrome","secondary_identifiers":["MEDGEN:930013","GARD:18943","UMLS:C4304344"],"termid":"MONDO:0019205","xrefs":{"Monarch":{"xref_id":"0019205"}}}


id: GO:0061865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The basement membrane constituent secretion in which there is a restriction or targeting of basement membrane proteins for controlled release on the basal side of polarized epithelium.","definition_xrefs":["PMID:28228250","PMID:26610918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basement membrane constituent secretion","termid":"GO:0061864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"polarized secretion of basement membrane proteins in epithelium","termid":"GO:0061865"}


id: GO:0034328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a decanoyl (CH3-[CH2]8-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"decanoyltransferase activity","termid":"GO:0034328"}


id: PBO:0045800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin receptor type A","termid":"PBO:0045800"}


id: PBO:0074930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 97","termid":"PBO:0074930"}


id: PBO:0067806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 108","termid":"PBO:0067806"}


id: PBO:0056780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mex-3 RNA binding family member B","termid":"PBO:0056780"}


id: PR:O60163
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine-sensitive aspartokinase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03819","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.04","secondary_identifiers":["UniProtKB:O60163"],"synonyms":[{"name":"Spom972h-lysC","type":"exact"},{"name":"aspartate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60163"}


id: PBO:0089720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase non-catalytic subunit Gcd10","termid":"PBO:0089720"}


id: GO:0045121
data:
  {"annotated_genes":["SJAG_04001","SJAG_04714","SJAG_04620","SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103047,118322,88232,89121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.","definition_xrefs":["PMID:16645198","PMID:20044567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane microdomain","termid":"GO:0098857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03536":null,"SJAG_04001":null,"SJAG_04620":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"membrane raft","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Lipid_raft"],"synonyms":[{"name":"GEM domain","type":"related"},{"name":"glycolipid-enriched membrane domain","type":"related"},{"name":"lipid raft","type":"exact"}],"termid":"GO:0045121","terms_by_termid":{"GO:0044853":null}}


id: GO:0031090
data:
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id: SO:0002369
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A scaRNA possessing a box C/D sequence motif, guiding the methylation of snRNAs.","definition_xrefs":["PMID:24659245","PMID:17099227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA","termid":"SO:0002095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_scaRNA","synonyms":[{"name":"C/D scaRNA","type":"exact"}],"termid":"SO:0002369"}


id: MONDO:0008055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Thomsen and Becker disease","termid":"MONDO:0009710"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotonia congenita, autosomal dominant","secondary_identifiers":["DOID:0081336","OMIM:160800","SCTID:57938005","ICD9:359.29","MEDGEN:422446","GARD:6176","SCTID:8960007","UMLS:C2936781"],"synonyms":[{"name":"Thomsen and Becker disease","type":"broad"},{"name":"Thomsen disease","type":"exact"},{"name":"Thomsen's disease","type":"exact"},{"name":"congenital myotonia, autosomal dominant form","type":"exact"},{"name":"myotonia Levior","type":"related"},{"name":"myotonia congenita, autosomal dominant","type":"exact"},{"name":"myotonia congenita, dominant","type":"exact"}],"termid":"MONDO:0008055","xrefs":{"Monarch":{"xref_id":"0008055"}}}


id: PBO:0066823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 122","termid":"PBO:0066823"}


id: PBO:0056634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 13","termid":"PBO:0056634"}


id: PBO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain","termid":"PBO:0002307"}


id: PBO:0003588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein complex assembly protein (predicted)","termid":"PBO:0003588"}


id: MONDO:0000303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"subcutaneous mycosis","termid":"MONDO:0000255"},{"relation_name":"is_a","term_name":"tinea infection","termid":"MONDO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"conidiobolomycosis","secondary_identifiers":["UMLS:C0276712","DOID:0050279","icd11.foundation:1326582778","SCTID:240783007","MEDGEN:547510","ICD9:111.8"],"synonyms":[{"name":"Conidiobolus infectious disease","type":"exact"},{"name":"infection by Conidiobolus","type":"exact"},{"name":"rhinoentomophthoromycosis","type":"related"}],"termid":"MONDO:0000303","xrefs":{"Monarch":{"xref_id":"0000303"}}}


id: GO:0003682
data:
  {"annotated_genes":["SJAG_03945","SJAG_03905","SJAG_00913","SJAG_00914","SJAG_01146","SJAG_03441","SJAG_00164","SJAG_04670","SJAG_00698","SJAG_03460","SJAG_04755","SJAG_01938","SJAG_03944","SJAG_03694","SJAG_02773","SJAG_03698","SJAG_00440","SJAG_02348","SJAG_02810","SJAG_00861","SJAG_04512","SJAG_03635","SJAG_00796","SJAG_04917","SJAG_03997","SJAG_01745","SJAG_05239","SJAG_00170","SJAG_02314","SJAG_03689","SJAG_04586","SJAG_01610","SJAG_03449","SJAG_03926","SJAG_04879","SJAG_05313","SJAG_03787","SJAG_01599","SJAG_05333","SJAG_03832","SJAG_03431","SJAG_03982","SJAG_01653","SJAG_03418","SJAG_01823","SJAG_01067","SJAG_00471","SJAG_04205","SJAG_03128","SJAG_03387","SJAG_02990","SJAG_04396","SJAG_00584","SJAG_00768","SJAG_00942","SJAG_02563","SJAG_01878","SJAG_05192","SJAG_02401","SJAG_01016","SJAG_00935","SJAG_04183","SJAG_03927","SJAG_03579","SJAG_01827","SJAG_00641","SJAG_02815","SJAG_00327","SJAG_01157","SJAG_00728","SJAG_04407","SJAG_03354","SJAG_02416","SJAG_00311","SJAG_00618","SJAG_04038","SJAG_00585","SJAG_00783","SJAG_01046","SJAG_02165","SJAG_01010","SJAG_00925","SJAG_04210","SJAG_00863","SJAG_02698"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57412,58458,66373,68344,69603,69656,70091,70208,70306,70875,71185,71673,71947,72626,72796,72897,73221,73441,73684,73982,74686,74838,75032,75881,76201,76431,77193,77603,77646,77989,78011,78333,78578,79254,79930,80009,80026,88899,90433,93763,100873,103956,106788,107944,111546,112680,112848,113180,115077,115454],"is_not":false,"summary":null,"term":"GO:0003682"},{"annotations":[76866,73751,79562,110920,70102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031490"},{"annotations":[115159,99384,108928,106727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043035"},{"annotations":[105188,115787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990188"},{"annotations":[113093,103026,77314,74664,95953,79429,78447,109741,107677,76690,96888,102705,71108,73504,110022,115203,93881,116814,116920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031491"},{"annotations":[111676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140585"},{"annotations":[76518,106529,93002,93882,91212,108985,103027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990841"}]},"cv_name":"molecular_function","definition":"Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.","definition_xrefs":["PMID:20404130","GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":85,"genes_by_uniquename":{"SJAG_00164":null,"SJAG_00170":null,"SJAG_00311":null,"SJAG_00327":null,"SJAG_00440":null,"SJAG_00471":null,"SJAG_00584":null,"SJAG_00585":null,"SJAG_00618":null,"SJAG_00641":null,"SJAG_00698":null,"SJAG_00728":null,"SJAG_00768":null,"SJAG_00783":null,"SJAG_00796":null,"SJAG_00861":null,"SJAG_00863":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00935":null,"SJAG_00942":null,"SJAG_01010":null,"SJAG_01016":null,"SJAG_01046":null,"SJAG_01067":null,"SJAG_01146":null,"SJAG_01157":null,"SJAG_01599":null,"SJAG_01610":null,"SJAG_01653":null,"SJAG_01745":null,"SJAG_01823":null,"SJAG_01827":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02165":null,"SJAG_02314":null,"SJAG_02348":null,"SJAG_02401":null,"SJAG_02416":null,"SJAG_02563":null,"SJAG_02698":null,"SJAG_02773":null,"SJAG_02810":null,"SJAG_02815":null,"SJAG_02990":null,"SJAG_03128":null,"SJAG_03354":null,"SJAG_03387":null,"SJAG_03418":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03449":null,"SJAG_03460":null,"SJAG_03579":null,"SJAG_03635":null,"SJAG_03689":null,"SJAG_03694":null,"SJAG_03698":null,"SJAG_03787":null,"SJAG_03832":null,"SJAG_03905":null,"SJAG_03926":null,"SJAG_03927":null,"SJAG_03944":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04038":null,"SJAG_04183":null,"SJAG_04205":null,"SJAG_04210":null,"SJAG_04396":null,"SJAG_04407":null,"SJAG_04512":null,"SJAG_04586":null,"SJAG_04670":null,"SJAG_04755":null,"SJAG_04879":null,"SJAG_04917":null,"SJAG_05192":null,"SJAG_05239":null,"SJAG_05313":null,"SJAG_05333":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chromatin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"lamin/chromatin binding","type":"narrow"},{"name":"microtubule/chromatin interaction","type":"narrow"},{"name":"nuclear membrane vesicle binding to chromatin","type":"narrow"}],"termid":"GO:0003682","terms_by_termid":{"GO:0003682":null,"GO:0031490":null,"GO:0031491":null,"GO:0043035":null,"GO:0140585":null,"GO:1990188":null,"GO:1990841":null}}


id: MONDO:0016579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with defective bone mineralization (obsolete MONDO:0019705)","termid":"MONDO:0019705"}],"gene_count":0,"genotype_count":0,"name":"obsolete dominant hypophosphatemia with nephrolithiasis or osteoporosis (obsolete MONDO:0016579)","secondary_identifiers":["Orphanet:244305"],"termid":"MONDO:0016579","xrefs":{"Monarch":{"xref_id":"0016579"}}}


id: MONDO:0011463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, autosomal recessive axonal hereditary motor and sensory neuropathy disease characterized by prenatal onset of a severe sensorimotor axonal polyneuropathy (reflected by reduced fetal movement and polyhydramnios), manifesting, at birth, with respiratory failure requiring mechanical ventilation, profound muscular hypotonia, rapidly progressing distal muscle weakness, and absent deep tendon reflexes, in the absence of contractures, leading to death before 8 months of age. Neuropathological findings show severe loss of large- and medium-sized myelinated fibers without signs of demyelination.","definition_xrefs":["Orphanet:538096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, lethal neonatal, axonal sensorimotor, autosomal recessive","secondary_identifiers":["MEDGEN:348918","MESH:C565773","OMIM:604431","UMLS:C1858353","GARD:17976"],"synonyms":[{"name":"polyneuropathy, lethal neonatal, axonal sensorimotor, autosomal recessive","type":"exact"}],"termid":"MONDO:0011463","xrefs":{"Monarch":{"xref_id":"0011463"}}}


id: FYPO:0000740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular pigment accumulation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular pigment accumulation phenotype","termid":"FYPO:0000739"},{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular pigment accumulation","synonyms":[{"name":"normal cellular pigment accumulation during mitotic cell cycle","type":"related"},{"name":"normal cellular pigment accumulation during vegetative growth","type":"exact"}],"termid":"FYPO:0000740"}


id: MONDO:0005204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An antiphospholipid syndrome that occurs as an isolated disorder.","direct_ancestors":[{"relation_name":"is_a","term_name":"antiphospholipid syndrome","termid":"MONDO:8000010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"primary antiphospholipid syndrome","secondary_identifiers":["SCTID:239892009","icd11.foundation:85700944","NANDO:1200267","MEDGEN:592740","UMLS:C0409980","ICD9:795.79"],"termid":"MONDO:0005204","xrefs":{"Monarch":{"xref_id":"0005204"}}}


id: PBO:0039767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 2","termid":"PBO:0039767"}


id: PBO:0043144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 12","termid":"PBO:0043144"}


id: PBO:0087169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C82","termid":"PBO:0087169"}


id: PBO:0089801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S11","termid":"PBO:0089801"}


id: MONDO:0100313
data:
  {"annotated_genes":["SJAG_04001","SJAG_04621","SJAG_00118","SJAG_01143"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[85737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013589"},{"annotations":[86672,86671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014462"}]},"cv_name":"mondo","definition":"A renal disorder characterized by sclerotic lesions in the glomeruli. Causes include drugs, viruses, and malignancies (lymphomas), or it may be idiopathic. It presents with asymptomatic proteinuria or nephritic syndrome and it may lead to renal failure.","definition_xrefs":["NCIT:C37308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulosclerosis","termid":"MONDO:0000490"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_04001":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:6517","SCTID:236403004","EFO:0004236","MEDGEN:4904","ICD9:582.1","DOID:1312","MESH:D005923","UMLS:C0017668"],"synonyms":[{"name":"FGS","type":"exact"},{"name":"FGS (focal glomerular sclerosis)","type":"exact"},{"name":"FSGS","type":"exact"},{"name":"FSGS - focal segmental glomerulosclerosis","type":"exact"},{"name":"focal glomerular sclerosis","type":"exact"},{"name":"focal glomerulosclerosis","type":"exact"}],"termid":"MONDO:0100313","terms_by_termid":{"MONDO:0011303":null,"MONDO:0013589":null,"MONDO:0014462":null},"xrefs":{"Monarch":{"xref_id":"0100313"}}}


id: PBO:0000993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent 3' to 5' DNA helicase, FANCM ortholog Fml1","termid":"PBO:0000993"}


id: PBO:0026755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0026755"}


id: GO:1905232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-glutamate(1-) stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:25962137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to L-glutamate","termid":"GO:1902065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-glutamate","synonyms":[{"name":"cellular response to L-glutamate(1-)","type":"related"}],"termid":"GO:1905232"}


id: MONDO:1010807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in springbok.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, springbok","secondary_identifiers":["OMIA:000810-59523"],"termid":"MONDO:1010807","xrefs":{"Monarch":{"xref_id":"1010807"}}}


id: GO:0043695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a pheromone stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to pheromone","termid":"GO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of pheromone","termid":"GO:0043695"}


id: PBO:0109518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPDYE1 and UBE2D4 antisense RNA 1","termid":"PBO:0109518"}


id: PBO:0030614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cell_wall-degrading_enzymes","termid":"PBO:0030614"}


id: GO:1905433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:19448629","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"regulation of retrograde trans-synaptic signaling by neuropeptide","termid":"GO:1905432"},{"relation_name":"negatively_regulates","term_name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of retrograde trans-synaptic signaling by neuropeptide","synonyms":[{"name":"down regulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"},{"name":"down-regulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"},{"name":"downregulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"},{"name":"inhibition of neuropeptide-mediated retrograde trans-synaptic signaling","type":"related"},{"name":"inhibition of retrograde trans-synaptic signaling by neuropeptide","type":"narrow"},{"name":"negative regulation of neuropeptide-mediated retrograde trans-synaptic signaling","type":"related"}],"termid":"GO:1905433"}


id: MONDO:0019761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngo-tracheo-esophageal cleft (LC) type 1 is a congenital respiratory tract anomaly characterized by a supraglottic, interarytenoid cleft above the vocal folds with moderate respiratory symptoms.","definition_xrefs":["Orphanet:93938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft type 1","secondary_identifiers":["GARD:19236","UMLS:C0584823","MEDGEN:667239"],"synonyms":[{"name":"LTEC I","type":"exact"},{"name":"LTEC1","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft type 1","type":"exact"}],"termid":"MONDO:0019761","xrefs":{"Monarch":{"xref_id":"0019761"}}}


id: MONDO:0043789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Delayed-type hypersensitivity reaction to foreign proteins derived from an animal serum. It occurs approximately six to twenty one days following the administration of the foreign antigen. Symptoms include fever, arthralgias, myalgias, skin eruptions, lymphadenopathy, chest pain, and dyspnea. Certain drugs (e.g., antibiotics, anticancer agents, and anti-inflammatory medications) and infectious disorders (e.g., hepatitis B) may also cause serum sickness-like reaction.","definition_xrefs":["NCIT:C79718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type IV hypersensitivity disease","termid":"MONDO:0002459"},{"relation_name":"is_a","term_name":"type III hypersensitivity disease","termid":"MONDO:0007004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"serum sickness","secondary_identifiers":["icd11.foundation:715261250","MEDGEN:11390","MESH:D012713","SCTID:72284000","UMLS:C0036830"],"synonyms":[{"name":"Sicknesses, serum","type":"related"},{"name":"intoxication by serum","type":"related"},{"name":"protein sickness","type":"related"},{"name":"serum Sicknesses","type":"related"},{"name":"serum reaction","type":"related"},{"name":"serum sickness","type":"exact"},{"name":"sickness, serum","type":"related"},{"name":"transfusion reaction due to serum protein reaction","type":"exact"}],"termid":"MONDO:0043789","xrefs":{"Monarch":{"xref_id":"0043789"}}}


id: GO:0090555
data:
  {"annotated_genes":["SJAG_05209","SJAG_02897","SJAG_01731","SJAG_00669","SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94225,97732,99283,99999,112291],"is_not":false,"summary":null,"term":"GO:0090555"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylethanolamine from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:20043909","GOC:ab","PMID:16452632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphatidylethanolamine flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent phosphatidylethanolamine transporter activity","type":"related"},{"name":"ATPase-coupled phosphatidylethanolamine transporter activity","type":"broad"},{"name":"phosphatidylethanolamine flippase activity (exoplasmic to cytosolic leaflet)","type":"exact"},{"name":"phosphatidylethanolamine-translocating ATPase activity","type":"related"}],"termid":"GO:0090555","terms_by_termid":{"GO:0090555":null}}


id: GO:1904708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of granulosa cell apoptotic process.","definition_xrefs":["GO_REF:0000058","PMID:19208546","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"granulosa cell apoptotic process","termid":"GO:1904700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of granulosa cell apoptotic process","synonyms":[{"name":"regulation of granulosa cell apoptosis","type":"narrow"},{"name":"regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"regulation of granulosa cell of ovary apoptotic process","type":"exact"}],"termid":"GO:1904708"}


id: GO:0033901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of poly(A), forming oligoribonucleotides and ultimately 3'-AMP.","definition_xrefs":["EC:3.1.27.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"ribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.27.8-RXN"],"synonyms":[{"name":"endoribonuclease V activity","type":"related"}],"termid":"GO:0033901"}


id: PBO:0070208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 136 pseudogene","termid":"PBO:0070208"}


id: GO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress.","definition_xrefs":["PMID:12925704","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane repair","termid":"GO:0001778"}


id: MONDO:0003984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm of the internal auditory canal, often presenting as an acoustic tumor. It may be intermixed with the vestibulocochlear nerve and may adhere to adjacent structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"auditory system cancer","termid":"MONDO:0004532"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign neoplasm of ear","termid":"MONDO:0021474"},{"relation_name":"is_a","term_name":"inner ear neoplasm","termid":"MONDO:0024320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal auditory canal lipoma","secondary_identifiers":["MEDGEN:232658","DOID:6752","NCIT:C5452","UMLS:C1334226"],"synonyms":[{"name":"inner Ear lipoma","type":"exact"},{"name":"internal Ear lipoma","type":"exact"},{"name":"internal acoustic meatus lipoma","type":"exact"},{"name":"lipoma of internal acoustic meatus","type":"exact"},{"name":"lipoma of internal auditory canal","type":"exact"},{"name":"lipoma of the internal auditory canal","type":"exact"}],"termid":"MONDO:0003984","xrefs":{"Monarch":{"xref_id":"0003984"}}}


id: PBO:0041229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1orf50 antisense RNA 1","termid":"PBO:0041229"}


id: FYPO:0005491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of protein localization in vacuole occurs to a lower extent than normal, and some of the protein is secreted, i.e. some of a protein that normally resides in the vacuole is instead secreted.","definition_xrefs":["PMID:22484924","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased maintenance of protein localization in vacuole, with protein secreted","synonyms":[{"name":"decreased maintenance of protein localisation in vacuole, with protein secreted","type":"exact"},{"name":"decreased maintenance of protein localization in vacuole, with protein secreted, during mitotic cell cycle","type":"related"},{"name":"decreased maintenance of protein localization in vacuole, with protein secreted, during vegetative growth","type":"exact"},{"name":"protein partially mislocalized from vacuole to extracellular region","type":"related"},{"name":"reduced maintenance of protein localization in vacuole, with protein secreted","type":"exact"}],"termid":"FYPO:0005491"}


id: GO:0032785
data:
  {"annotated_genes":["SJAG_01707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription elongation","termid":"GO:0032784"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"negatively_regulates","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01707":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"negative regulation of DNA-templated transcription, elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of RNA elongation","type":"broad"},{"name":"down-regulation of RNA elongation","type":"broad"},{"name":"downregulation of RNA elongation","type":"broad"},{"name":"inhibition of RNA elongation","type":"broad"},{"name":"negative regulation of DNA-dependent transcription, elongation","type":"exact"},{"name":"negative regulation of transcription elongation","type":"broad"},{"name":"negative regulation of transcription elongation, DNA-dependent","type":"exact"},{"name":"negative regulation of transcriptional elongation","type":"broad"},{"name":"negative transcription elongation regulator activity","type":"related"}],"termid":"GO:0032785","terms_by_termid":{"GO:0034244":null}}


id: GO:0019264
data:
  {"annotated_genes":["SJAG_01766","SJAG_03914"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71774,73189],"is_not":false,"summary":null,"term":"GO:0019264"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycine from other compounds, including serine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine biosynthetic process","termid":"GO:0006545"},{"relation_name":"is_a","term_name":"L-serine metabolic process","termid":"GO:0006563"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01766":null,"SJAG_03914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"glycine biosynthetic process from serine","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLYSYN-PWY"],"synonyms":[{"name":"glycine anabolism from serine","type":"exact"},{"name":"glycine formation from serine","type":"exact"},{"name":"glycine synthesis from serine","type":"exact"}],"termid":"GO:0019264","terms_by_termid":{"GO:0019264":null}}


id: FYPO:0000683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which the basal activity of an enzyme is increased relative to normal. Basal enzyme activity is the activity observed in the absence of a regulator. Abnormally elevated basal activity may or may not reach the levels observed in the normal activated state.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity phenotype","termid":"FYPO:0000654"},{"relation_name":"output_of","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001320","FYPO:0001985","FYPO:0000654","FYPO:0005447"],"is_obsolete":false,"name":"constitutive catalytic activity","synonyms":[{"name":"constitutive catalytic activity during mitotic cell cycle","type":"related"},{"name":"constitutive catalytic activity during vegetative growth","type":"exact"},{"name":"constitutive enzymatic activity","type":"exact"},{"name":"constitutively active enzyme","type":"related"}],"termid":"FYPO:0000683"}


id: PBO:0074824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 20","termid":"PBO:0074824"}


id: GO:0016819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid anhydride which contains a sulfonyl group, -SO2-.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides","termid":"GO:0016817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides","secondary_identifiers":["EC:3.6.2.-"],"synonyms":[{"name":"hydrolase activity, acting on acid anhydrides, in sulphonyl-containing anhydrides","type":"exact"}],"termid":"GO:0016819"}


id: PR:Q9UTA0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.11c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.11c","synonyms":[{"name":"Spom972h-SPAC27E2.11c","type":"exact"}],"termid":"PR:Q9UTA0"}


id: GO:0090136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an epithelial cell to another epithelial cell via adhesion molecules.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"epithelial cell-cell adhesion","termid":"GO:0090136"}


id: PBO:0031370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate_vegetative_cell","termid":"PBO:0031370"}


id: PBO:0065380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 8","termid":"PBO:0065380"}


id: PBO:0078694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (AAG) 5-1","termid":"PBO:0078694"}


id: PBO:0005554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps60 (predicted)","termid":"PBO:0005554"}


id: PBO:0045770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein 1 pseudogene 1","termid":"PBO:0045770"}


id: PBO:0055243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2670","termid":"PBO:0055243"}


id: PBO:0085318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 3-phosphate binding protein; formation of a distinct complex with TORC1, induced by glutamine in dose-dependent manner, results in TORC1 activation, suggesting dual roles as both a glutamine sensor and a direct TORC1 activator; involved in leucine- and glutamine-responsive TORC1 activation, independent of the Gtr/Ego pathway; related to human PLEKHF1, a lysosomal membrane permeabilization regulator; contains a PtdIns3P binding FYVE domain; similar to Fab1p and Vps27p","termid":"PBO:0085318"}


id: GO:0072423
data:
  {"annotated_genes":["SJAG_04332","SJAG_04183","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[102190,94339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA integrity checkpoint signaling","termid":"GO:0072402"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage checkpoint effector process","type":"exact"},{"name":"response to signal involved in DNA damage checkpoint","type":"exact"}],"termid":"GO:0072423","terms_by_termid":{"GO:0072429":null,"GO:0072435":null}}


id: PBO:0082720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1p complex involved in transcription elongation; binds to and modulates the activity of RNA polymerases I and II; required for expression of a subset of genes, including cell cycle-regulated genes; involved in SER3 repression by helping to maintain SRG1 transcription-dependent nucleosome occupancy; homolog of human PD2/hPAF1","termid":"PBO:0082720"}


id: MONDO:0011369
data:
  {"annotated_genes":["SJAG_04785","SJAG_02432","SJAG_01072"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86303,86304,86305],"is_not":false,"summary":null,"term":"MONDO:0011369"}]},"cv_name":"mondo","definition":"Any familial hypercholesterolemia in which the cause of the disease is a mutation in the PCSK9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypercholesterolemia","termid":"MONDO:0005439"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01072":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"hypercholesterolemia, autosomal dominant, 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:603776","UMLS:C1863551","MESH:C566337","MEDGEN:355007"],"synonyms":[{"name":"Fh3","type":"related"},{"name":"HCHOLA3","type":"related"},{"name":"PCSK9 familial hypercholesterolemia","type":"exact"},{"name":"familial hypercholesterolemia caused by mutation in PCSK9","type":"exact"},{"name":"hypercholesterolemia, autosomal dominant, 3","type":"exact"},{"name":"hypercholesterolemia, autosomal dominant, type 3","type":"exact"},{"name":"hypercholesterolemia, familial, 3","type":"exact"},{"name":"low density lipoprotein cholesterol level QTL 1","type":"exact"},{"name":"low density lipoprotein cholesterol level quantitative trait locus 1","type":"related"}],"termid":"MONDO:0011369","terms_by_termid":{"MONDO:0011369":null},"xrefs":{"Monarch":{"xref_id":"0011369"}}}


id: PBO:0086852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Rheb-related GTPase; involved in regulating canavanine resistance and arginine uptake; member of the Ras superfamily of G-proteins","termid":"PBO:0086852"}


id: PBO:0086335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proton:glutathione antiporter; localized to the vacuolar and plasma membranes; imports glutathione from the vacuole and exports it through the plasma membrane; has a role in resistance to oxidative stress and modulation of the PKA pathway; GEX1 has a paralog, GEX2, that arose from a segmental duplication","termid":"PBO:0086335"}


id: PBO:0084377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Long chain fatty acyl-CoA synthetase; activates imported fatty acids with a preference for C16:0-C18:0 chain lengths; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery","termid":"PBO:0084377"}


id: PBO:0067939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 241","termid":"PBO:0067939"}


id: PBO:0040677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAR1 pseudogene 2","termid":"PBO:0040677"}


id: PBO:0076276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syncollin","termid":"PBO:0076276"}


id: PBO:0003363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator subunit Iki3 (predicted)","termid":"PBO:0003363"}


id: PBO:0085167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycosylated covalently-bound cell wall protein; required for cell wall stability; expression is cell cycle regulated, peaking in M/G1 and also subject to regulation by the cell integrity pathway; coding sequence contains length polymorphisms in different strains; PIR3 has a paralog, HSP150, that arose from the whole genome duplication","termid":"PBO:0085167"}


id: PBO:0043793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylation element binding protein 4","termid":"PBO:0043793"}


id: MONDO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the small intestine.","definition_xrefs":["NCIT:C26765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastroenteritis","termid":"MONDO:0002269"},{"relation_name":"is_a","term_name":"small intestine disorder","termid":"MONDO:0024635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"enteritis","secondary_identifiers":["SCTID:64613007","MEDGEN:4964","UMLS:C0014335","MESH:D004751"],"synonyms":[{"name":"Enteritides","type":"related"},{"name":"enteritis","type":"exact"},{"name":"enteritis of small intestine","type":"exact"},{"name":"enteritis, inflammatory disorder of small intestine","type":"related"},{"name":"inflammation of small intestine","type":"exact"},{"name":"small intestine inflammation","type":"exact"}],"termid":"MONDO:0043579","xrefs":{"Monarch":{"xref_id":"0043579"}}}


id: GO:0047125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + L-pipecolate = NADPH + delta1-piperideine-2-carboxylate.","definition_xrefs":["EC:1.5.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"delta1-piperideine-2-carboxylate reductase activity","secondary_identifiers":["MetaCyc:RXN-8166","RHEA:12524"],"synonyms":[{"name":"1,2-didehydropipecolate reductase activity","type":"related"},{"name":"1,2-didehydropipecolic reductase activity","type":"related"},{"name":"D1-piperideine-2-carboxylate reductase activity","type":"exact"},{"name":"L-pipecolate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"P2C reductase activity","type":"related"},{"name":"delta 1-piperideine-2-carboxylate reductase activity","type":"exact"}],"termid":"GO:0047125"}


id: _global:has_dividend_quality
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"has_ratio_quality","termid":"_global:has_ratio_quality"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_dividend_quality","termid":"_global:has_dividend_quality"}


id: GO:0035701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a hematopoietic stem cell from one site to another. A hematopoietic stem cell is a cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.","definition_xrefs":["PMID:20234092","GOC:BHF","CL:0000037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell migration","synonyms":[{"name":"hemopoietic stem cell migration","type":"exact"}],"termid":"GO:0035701"}


id: GO:0009086
data:
  {"annotated_genes":["SJAG_00309","SJAG_00395","SJAG_03671","SJAG_03712","SJAG_04042","SJAG_03614","SJAG_01466","SJAG_04425","SJAG_02972","SJAG_02290","SJAG_03881","SJAG_02689","SJAG_04459","SJAG_00419","SJAG_02293","SJAG_01404","SJAG_00365","SJAG_00881","SJAG_00234","SJAG_04953","SJAG_03152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64051,70588,71651,74335,76080,78867,111762,115577],"is_not":false,"summary":null,"term":"GO:0009086"},{"annotations":[65215,110882,105792,68270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[106404,99805,95356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[76765,77626,78167,80115,58695,79065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid biosynthetic process","termid":"GO:0000097"},{"relation_name":"is_a","term_name":"methionine metabolic process","termid":"GO:0006555"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00309":null,"SJAG_00365":null,"SJAG_00395":null,"SJAG_00419":null,"SJAG_00881":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_03152":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_03881":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"methionine biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"methionine anabolism","type":"exact"},{"name":"methionine biosynthesis","type":"exact"},{"name":"methionine formation","type":"exact"},{"name":"methionine synthesis","type":"exact"}],"termid":"GO:0009086","terms_by_termid":{"GO:0009086":null,"GO:0019509":null,"GO:0071266":null,"GO:1990355":null}}


id: GO:0061493
data:
  {"annotated_genes":["SJAG_02795","SJAG_02246","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96655,98071,99653],"is_not":false,"summary":null,"term":"GO:0061493"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the inner plaque is on the nuclear face of the spindle pole body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central plaque of spindle pole body","termid":"GO:0005823"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02246":null,"SJAG_02795":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005816"],"is_obsolete":false,"name":"central plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061493","terms_by_termid":{"GO:0061493":null}}


id: MONDO:0015461
data:
  {"annotated_genes":["SJAG_01370"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","definition":"Short rib-polydactyly syndromes are a group of bone malformations characterized by a narrow thorax and polydactyly (usually preaxial).","definition_xrefs":["Orphanet:1505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01370":null},"genotype_count":0,"is_obsolete":false,"name":"short rib-polydactyly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:11412","icd11.foundation:960900212","NCIT:C85065","UMLS:C0036996","GARD:18726","MESH:D012779","SCTID:205484001","ICD9:756.3"],"termid":"MONDO:0015461","terms_by_termid":{"MONDO:0054565":null},"xrefs":{"Monarch":{"xref_id":"0015461"}}}


id: GO:0045066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a regulatory T cell. Regulatory T cells control or suppress immune responses through a variety of mechanisms and subsets include the CD4+CD25+ cell type as well as certain CD8+ cell types.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulatory T cell differentiation","synonyms":[{"name":"regulatory T cell development","type":"related"},{"name":"regulatory T lymphocyte differentiation","type":"exact"},{"name":"regulatory T-cell differentiation","type":"exact"},{"name":"regulatory T-lymphocyte differentiation","type":"exact"},{"name":"suppressor T cell differentiation","type":"exact"},{"name":"suppressor T lymphocyte differentiation","type":"exact"},{"name":"suppressor T-cell differentiation","type":"exact"},{"name":"suppressor T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045066"}


id: GO:0043128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the activity of 1-phosphatidylinositol 4-kinase.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of 1-phosphatidylinositol 4-kinase activity (obsolete GO:0043128)","synonyms":[{"name":"activation of 1-phosphatidylinositol 4-kinase activity","type":"narrow"},{"name":"positive regulation of PI4K activity","type":"exact"},{"name":"stimulation of 1-phosphatidylinositol 4-kinase activity","type":"narrow"},{"name":"up regulation of 1-phosphatidylinositol 4-kinase activity","type":"exact"},{"name":"up-regulation of 1-phosphatidylinositol 4-kinase activity","type":"exact"},{"name":"upregulation of 1-phosphatidylinositol 4-kinase activity","type":"exact"}],"termid":"GO:0043128"}


id: PBO:0062087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 18 pseudogene","termid":"PBO:0062087"}


id: PBO:0082345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent Lon protease; involved in degradation of misfolded mitochondrial proteins; required for mitochondrial maintenance and biogenesis; regulates mitochondrial DNA copy number with Mrx6p; subunit of a complex containing Mrx6p, Pet20p, and Mam33p that may regulate mtDNA replication; protease-independent, chaperone-like function in mitochondrial membrane complex assembly; localizes to the mitochondrial matrix","termid":"PBO:0082345"}


id: PBO:0070453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 10","termid":"PBO:0070453"}


id: GO:0052560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates the immune response of the symbiont organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont immune response (obsolete GO:0052560)","synonyms":[{"name":"induction by organism of symbiont immune response","type":"exact"}],"termid":"GO:0052560"}


id: PBO:0056457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARVEL domain containing 3","termid":"PBO:0056457"}


id: MONDO:0013508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 19, autosomal dominant","secondary_identifiers":["MEDGEN:462760","OMIM:613969","UMLS:C3151410"],"synonyms":[{"name":"MYP19","type":"exact"},{"name":"myopia 19, autosomal dominant","type":"exact"}],"termid":"MONDO:0013508","xrefs":{"Monarch":{"xref_id":"0013508"}}}


id: MONDO:0700009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 2 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 disorder","termid":"MONDO:0700009","xrefs":{"Monarch":{"xref_id":"0700009"}}}


id: GO:0062187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + N-(8,9-epoxy-5Z,11Z,14Z-eicosatrienoyl)-ethanolamine + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:21289075","RHEA:53140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anandamide epoxidase activity","termid":"GO:0062186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"anandamide 8,9 epoxidase activity","termid":"GO:0062187"}


id: PBO:0117093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCH antisense RNA 2","termid":"PBO:0117093"}


id: MONDO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"eyelid degenerative disorder","secondary_identifiers":["UMLS:C0155209","DOID:10120","SCTID:1112003","MEDGEN:509851","ICD9:374.50"],"synonyms":[{"name":"eyelid neurodegenerative disease","type":"exact"},{"name":"neurodegenerative disease of eyelid","type":"exact"}],"termid":"MONDO:0000941","xrefs":{"Monarch":{"xref_id":"0000941"}}}


id: GO:0044672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multifunctional enzyme complex composed of five different polypeptides that catalyzes the decarbonylation of acetyl-CoA, cleaves the C-C and C-S bonds in the acetyl moiety of acetyl-CoA, oxidizes the carbonyl group to CO2 and transfers the methyl group to tetrahydrosarcinapterin. These reactions are important for methanogenesis.","definition_xrefs":["PMID:7693685","PMID:8955306","GOC:mengo_curators","PMID:11607176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"acetyl-CoA decarbonylase/synthase-carbon monoxide dehydrogenase complex","synonyms":[{"name":"CO dehydrogenase complex","type":"broad"},{"name":"CO dehydrogenase/acetyl-CoA synthase complex","type":"exact"},{"name":"CODH","type":"broad"},{"name":"CODH/ACS complex","type":"exact"},{"name":"carbon monoxide dehydrogenase","type":"broad"},{"name":"carbon-monoxide:(acceptor) oxidoreductase complex","type":"broad"}],"termid":"GO:0044672"}


id: GO:1904011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an Aroclor 1254 stimulus.","definition_xrefs":["PMID:18602130","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to Aroclor 1254","termid":"GO:1904010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to Aroclor 1254","termid":"GO:1904011"}


id: PR:Q9P7L7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.06 gene.","definition_xrefs":["UniProtKB:Q9P7L7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C21C3.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.06","synonyms":[{"name":"Spom972h-SPBC21C3.06","type":"exact"}],"termid":"PR:Q9P7L7"}


id: PBO:0051585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18 receptor 1","termid":"PBO:0051585"}


id: MONDO:0015572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral malformation due to abnormal neuronal migration (obsolete MONDO:0015572)","secondary_identifiers":["Orphanet:163209"],"synonyms":[{"name":"brain malformation due to abnormal neuronal migration","type":"exact"},{"name":"non-syndromic cerebral malformation due to abnormal neuronal migration","type":"related"}],"termid":"MONDO:0015572","xrefs":{"Monarch":{"xref_id":"0015572"}}}


id: PBO:0064086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITPNA antisense RNA 1","termid":"PBO:0064086"}


id: MONDO:0020698
data:
  {"annotated_genes":["SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional biotin deficiency","termid":"MONDO:0000461"},{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn error of biotin metabolism","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0020698","terms_by_termid":{"MONDO:0009666":null},"xrefs":{"Monarch":{"xref_id":"0020698"}}}


id: GO:0050015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kievitone hydrate = H2O + H+ + kievitone.","definition_xrefs":["EC:4.2.1.95","RHEA:23604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"kievitone hydratase activity","secondary_identifiers":["MetaCyc:KIEVITONE-HYDRATASE-RXN","KEGG_REACTION:R03622"],"synonyms":[{"name":"KHase activity","type":"related"},{"name":"kievitone-hydrate hydro-lyase (kievitone-forming)","type":"related"},{"name":"kievitone-hydrate hydro-lyase activity","type":"related"}],"termid":"GO:0050015"}


id: GO:1905073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tight junction disassembly.","definition_xrefs":["GOC:rl","PMID:18718461","GOC:BHF","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"tight junction disassembly","termid":"GO:1905071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tight junction disassembly","synonyms":[{"name":"regulation of occluding cell junction disassembly","type":"exact"},{"name":"regulation of occluding junction disassembly","type":"exact"}],"termid":"GO:1905073"}


id: PATO:0002300
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that has a value that is increased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"deviation(from_normal)","termid":"PATO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased quality","termid":"PATO:0002300"}


id: PBO:0083489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YBR278W","termid":"PBO:0083489"}


id: MOD:01734
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01734"}


id: GO:1990477
data:
  {"annotated_genes":["SJAG_03939","SJAG_04768","SJAG_02382","SJAG_00701","SJAG_00456"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87278,90582,109049,111646,112544],"is_not":false,"summary":null,"term":"GO:1990477"}]},"cv_name":"cellular_component","definition":"Protein complex formed by an RNA binding protein Red1, an RNA helicase Mtl1, Red5, Rmn1, Iss10/Pir1, and Ars2/Pir2. This complex is required for the recruitment of the nuclear exosome to Mmi1 nuclear focus. It is likely related to the human CBCN complex. This complex is also known as RNA silencing (NURS) complex.","definition_xrefs":["PMID:32012158","PMID:24210919","PMID:24713849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00456":null,"SJAG_00701":null,"SJAG_02382":null,"SJAG_03939":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"MTREC complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990345"],"synonyms":[{"name":"Mtl1-Red1 core complex","type":"exact"},{"name":"NURS complex","type":"exact"},{"name":"PAXT complex","type":"exact"}],"termid":"GO:1990477","terms_by_termid":{"GO:1990477":null}}


id: SO:0001088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The covalent bond between sulfur atoms that binds two peptide chains or different parts of one peptide chain and is a structural determinant in many protein molecules.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001088 disulfide_bond (obsolete SO:0001088)","synonyms":[{"name":"disulfid","type":"related"},{"name":"disulfide","type":"related"},{"name":"disulfide bond","type":"related"},{"name":"disulphide","type":"exact"},{"name":"disulphide bond","type":"related"}],"termid":"SO:0001088"}


id: FYPO:0004858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing Congo Red.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on Congo Red","synonyms":[{"name":"normal cell population growth in presence of Congo Red","type":"exact"},{"name":"normal cell population growth on Congo Red","type":"exact"},{"name":"normal cellular response to Congo Red","type":"related"},{"name":"normal vegetative cell population growth on Congo Red","type":"exact"}],"termid":"FYPO:0004858"}


id: PBO:0031418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination","termid":"PBO:0031418"}


id: PBO:0032719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_mitotic_metaphase","termid":"PBO:0032719"}


id: MONDO:0015083
data:
  {"annotated_genes":["SJAG_01114","SJAG_04765","SJAG_02278","SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85171,85173,85172,85170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011444"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculomotor nerve paralysis","termid":"MONDO:0001309"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02278":null,"SJAG_04522":null,"SJAG_04765":null},"genotype_count":0,"is_obsolete":false,"name":"nuclear oculomotor paralysis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:100932"],"termid":"MONDO:0015083","terms_by_termid":{"MONDO:0011444":null},"xrefs":{"Monarch":{"xref_id":"0015083"}}}


id: MONDO:0859266
data:
  {"annotated_genes":["SJAG_00872"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86643],"is_not":false,"summary":null,"term":"MONDO:0859266"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with severe motor impairment, absent language, cerebral hypomyelination, and brain atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774185","MEDGEN:1823958","OMIM:619972"],"termid":"MONDO:0859266","terms_by_termid":{"MONDO:0859266":null},"xrefs":{"Monarch":{"xref_id":"0859266"}}}


id: GO:0102654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-acyl-2-hexadecanoyl-glycerolipid + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = a 1-acyl-2-[(3E)-hexadec-3-enoyl]-glycerolipid + 2 H2O + 2 oxidized [2Fe-2S]-[ferredoxin]. The this activity introduces an unusual trans double bond at carbon 3 of a palmitoyl group attached to the sn-2 position of glycerolipids.","definition_xrefs":["RHEA:46764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"palmitoyl-[glycerolipid] 3-(E)-desaturase activity","secondary_identifiers":["EC:1.14.19.43","MetaCyc:RXN-16053"],"synonyms":[{"name":"1-18:1-2-16:0-phosphatidylglycerol trans-3 desaturase activity","type":"related"}],"termid":"GO:0102654"}


id: PBO:0053518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 508","termid":"PBO:0053518"}


id: GO:2000129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of octopamine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of octopamine or tyramine signaling pathway","termid":"GO:2000126"},{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway","termid":"GO:2000128"},{"relation_name":"negatively_regulates","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of octopamine signaling pathway","synonyms":[{"name":"negative regulation of octopamine signalling pathway","type":"exact"}],"termid":"GO:2000129"}


id: PR:O14073
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.08 gene.","definition_xrefs":["UniProtKB:O14073","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl aminopeptidase C2E11.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.08","synonyms":[{"name":"Spom972h-SPACUNK4.08","type":"exact"}],"termid":"PR:O14073"}


id: PBO:0003747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, Atf-CREB family Atf21","termid":"PBO:0003747"}


id: PBO:0015653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-level_fluctuates_during","termid":"PBO:0015653"}


id: PBO:0064372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral myelin protein 22","termid":"PBO:0064372"}


id: PBO:0061871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one cut homeobox 3","termid":"PBO:0061871"}


id: SO:0000698
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding an mRNA that has the stop codon redefined as pyrrolysine.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_redefined_as_pyrrolysine","termid":"SO:0000884"},{"relation_name":"is_a","term_name":"gene_with_stop_codon_read_through","termid":"SO:0000697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_redefined_as_pyrrolysine","synonyms":[{"name":"gene with stop codon redefined as pyrrolysine","type":"exact"}],"termid":"SO:0000698"}


id: PBO:0050474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A2","termid":"PBO:0050474"}


id: MONDO:0012462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive frontotemporal pachygyria","secondary_identifiers":["UMLS:C1853215","OMIM:610279","MESH:C538092","Orphanet:329329","GARD:21489","MEDGEN:343995"],"synonyms":[{"name":"pachygyria, frontotemporal","type":"related"}],"termid":"MONDO:0012462","xrefs":{"Monarch":{"xref_id":"0012462"}}}


id: PBO:0053212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 9B","termid":"PBO:0053212"}


id: FYPO:0004894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is decreased during sporulation.","definition_xrefs":["PomBase:mah","PMID:11069657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0002159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased 1,3-beta-D-glucan synthase activity during sporulation","synonyms":[{"name":"reduced 1,3-beta-D-glucan synthase activity during sporulation","type":"exact"}],"termid":"FYPO:0004894"}


id: PBO:0031844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0031844"}


id: PBO:0073019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short coiled-coil protein","termid":"PBO:0073019"}


id: PBO:0114110
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"much shorter than S. c Ina22, butpicked up by Jackhmmr with good score/motif conservation","termid":"PBO:0114110"}


id: SO:0000703
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence implicated in an experimental result.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"remark","termid":"SO:0000700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimental_result_region","synonyms":[{"name":"experimental result region","type":"exact"}],"termid":"SO:0000703"}


id: PBO:0012847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide-methionine (R)-S-oxide reductase MsrB","termid":"PBO:0012847"}


id: GO:0044829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism activates or increases the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation by host of viral process","termid":"GO:0044794"},{"relation_name":"is_a","term_name":"modulation by host of viral genome replication","termid":"GO:0044827"},{"relation_name":"positively_regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by host of viral genome replication","termid":"GO:0044829"}


id: GO:0046321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid oxidation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid metabolic process","termid":"GO:0045923"},{"relation_name":"is_a","term_name":"regulation of fatty acid oxidation","termid":"GO:0046320"},{"relation_name":"positively_regulates","term_name":"fatty acid oxidation","termid":"GO:0019395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of fatty acid oxidation","synonyms":[{"name":"activation of fatty acid oxidation","type":"narrow"},{"name":"stimulation of fatty acid oxidation","type":"narrow"},{"name":"up regulation of fatty acid oxidation","type":"exact"},{"name":"up-regulation of fatty acid oxidation","type":"exact"},{"name":"upregulation of fatty acid oxidation","type":"exact"}],"termid":"GO:0046321"}


id: GO:0002930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the trabecular meshwork over time, from its formation to the mature structure. The trabecular meshwork is a fenestrated endothelial-like tissue situated at the intersection of the cornea and the iris. The trabecular meshwork provides drainage for the aqueous humor.","definition_xrefs":["PMID:20568247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trabecular meshwork development","termid":"GO:0002930"}


id: GO:0140088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde + NADP+ + H2O = acetate + NADPH + 2 H+.","definition_xrefs":["PMID:15659684","PMID:9473035","RHEA:25298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NADP+) activity","termid":"GO:0033721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"acetaldehyde dehydrogenase (NADP+) activity","termid":"GO:0140088"}


id: PBO:0059813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 39","termid":"PBO:0059813"}


id: GO:0007505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the adult fat body over time, from its formation to the mature structure. Larval fat body cells that remain at eclosion degenerate in the first 2 to 4 days of adult life, leaving behind the smaller cells of the adult fat body.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat body development","termid":"GO:0007503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult fat body development","termid":"GO:0007505"}


id: PR:O74984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC338.06c gene.","definition_xrefs":["UniProtKB:O74984","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein homolog C338.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.06c","synonyms":[{"name":"Spom972h-SPCC338.06c","type":"exact"}],"termid":"PR:O74984"}


id: GO:0012501
data:
  {"annotated_genes":["SJAG_01527","SJAG_03258","SJAG_00737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96341],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0012502"},{"annotations":[73724,79368],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0043065"}]},"cv_name":"biological_process","definition":"A process which begins when a cell receives an internal or external signal and activates a series of biochemical events (signaling pathway). The process ends with the death of the cell.","definition_xrefs":["GOC:lr","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell death","termid":"GO:0008219"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_01527":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016244","Reactome:R-HSA-5357801","Wikipedia:Programmed_cell_death"],"synonyms":[{"name":"PCD","type":"related"},{"name":"RCD","type":"related"},{"name":"caspase-independent apoptosis","type":"related"},{"name":"caspase-independent cell death","type":"narrow"},{"name":"non-apoptotic programmed cell death","type":"narrow"},{"name":"nonapoptotic programmed cell death","type":"narrow"},{"name":"regulated cell death","type":"broad"}],"termid":"GO:0012501","terms_by_termid":{"GO:0012502":null,"GO:0043065":null}}


id: PBO:0000979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin family","termid":"PBO:0000979"}


id: GO:1900587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arugosin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"arugosin metabolic process","termid":"GO:1900585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"arugosin biosynthetic process","synonyms":[{"name":"arugosin anabolism","type":"exact"},{"name":"arugosin biosynthesis","type":"exact"},{"name":"arugosin formation","type":"exact"},{"name":"arugosin synthesis","type":"exact"}],"termid":"GO:1900587"}


id: MOD:01644
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-phenylalanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-phenylalanine removal","termid":"MOD:01644"}


id: PBO:0017554
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bypass of Yeast Ras","termid":"PBO:0017554"}


id: PBO:0044601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCAF8 divergent transcript","termid":"PBO:0044601"}


id: PBO:0041087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and PHD finger containing 3","termid":"PBO:0041087"}


id: GO:0009530
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant cell wall that is still able to expand, permitting cell growth. Primary cell walls contain more pectin than secondary walls and no lignin is present.","definition_xrefs":["GOC:jid","PMID:9442872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"primary cell wall","termid":"GO:0009530"}


id: PBO:0075559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG7 matrix AAA peptidase subunit, paraplegin","termid":"PBO:0075559"}


id: MONDO:1012781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any paroxysmal dyskinesia that occurs in dogs due to a mutation in the PIGN gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dyskinesia, dog","termid":"MONDO:1010422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysmal dyskinesia, PIGN-related, dog","secondary_identifiers":["OMIA:002084-9615"],"termid":"MONDO:1012781","xrefs":{"Monarch":{"xref_id":"1012781"}}}


id: GO:1902487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a non-growing cell tip.","definition_xrefs":["PMID:23041194","GOC:TermGenie","PMID:21652630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to non-growing cell tip","synonyms":[{"name":"protein localisation in non-growing cell tip","type":"exact"},{"name":"protein localisation to non-growing cell tip","type":"exact"},{"name":"protein localization in non-growing cell tip","type":"exact"}],"termid":"GO:1902487"}


id: PBO:0027595
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_binucleate_multiseptate_vegetative_cell","termid":"PBO:0027595"}


id: FYPO:0000288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype that affects the regulation of gene expression.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression phenotype","termid":"FYPO:0000142"},{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"gene expression regulation phenotype","synonyms":[{"name":"fission yeast gene expression regulation phenotype","type":"exact"}],"termid":"FYPO:0000288"}


id: FYPO:0004678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated 25S rRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased polyadenylated 25S rRNA level","synonyms":[{"name":"increased mature polyadenylated 25S rRNA transcript level","type":"exact"},{"name":"increased polyadenylated 25S rRNA accumulation","type":"related"},{"name":"increased polyadenylated 25S rRNA level during mitotic cell cycle","type":"related"},{"name":"increased polyadenylated 25S rRNA level during vegetative growth","type":"exact"},{"name":"increased polyadenylated 25S rRNA transcript level","type":"exact"}],"termid":"FYPO:0004678"}


id: PBO:0064374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMPCA pseudogene 1","termid":"PBO:0064374"}


id: GO:0005123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the death receptor (DR) family. The DR family falls within the tumor necrosis factor receptor superfamily and is characterized by a cytoplasmic region of ~80 residues termed the death domain (DD).","definition_xrefs":["GOC:ceb","GOC:rl","PMID:15654015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor receptor superfamily binding","termid":"GO:0032813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"death receptor binding","synonyms":[{"name":"APO binding","type":"narrow"},{"name":"DR binding","type":"narrow"},{"name":"EDAR binding","type":"narrow"},{"name":"FAS binding","type":"narrow"},{"name":"KILLER binding","type":"narrow"},{"name":"NGFR binding","type":"narrow"},{"name":"TNFR1 binding","type":"narrow"},{"name":"TRAIL binding","type":"narrow"},{"name":"death receptor adaptor protein activity","type":"related"},{"name":"death receptor interacting protein activity","type":"related"},{"name":"death receptor ligand","type":"narrow"},{"name":"death receptor-associated factor activity","type":"related"}],"termid":"GO:0005123"}


id: PBO:0055723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin B2","termid":"PBO:0055723"}


id: GO:0042942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which of D-serine, the D-enantiomer of 2-amino-3-hydroxypropanoic acid is transported across a lipid bilayer, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jsg","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"serine transport","termid":"GO:0032329"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"D-serine transmembrane transport","termid":"GO:0042942"}


id: PBO:0067503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 643, pseudogene","termid":"PBO:0067503"}


id: PBO:0027613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated,_septated_cell","termid":"PBO:0027613"}


id: PBO:0085678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in producing mature rRNAs and snoRNAs; involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the small subunit processome complex, which is required for processing of pre-18S rRNA","termid":"PBO:0085678"}


id: PBO:0064830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R9A antisense RNA 1","termid":"PBO:0064830"}


id: PR:O94639
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zrt1 gene.","definition_xrefs":["UniProtKB:O94639","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-regulated transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.06","synonyms":[{"name":"Spom972h-zrt1","type":"exact"},{"name":"high-affinity zinc transport protein zrt1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94639"}


id: MONDO:0010811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-cancerous nodular enlargement of the prostate gland. It is characterized by the presence of epithelial cell nodules, and stromal nodules containing fibrous and smooth muscle elements. It is the most common urologic disorder in men, causing blockage of urine flow.","definition_xrefs":["NCIT:C2897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate disorder","termid":"MONDO:0003105"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign prostatic hyperplasia","secondary_identifiers":["DOID:11132","HP:0008711","UMLS:C1704272","SCTID:266569009","ICD9:600","ICD9:600.20","EFO:0000284","MEDGEN:312369","OMIM:600082","ICD9:600.0","MESH:D011470"],"synonyms":[{"name":"BPH","type":"related"},{"name":"benign hyperplasia of prostate","type":"exact"},{"name":"benign hyperplasia of the prostate","type":"exact"},{"name":"benign prostate hyperplasia","type":"exact"},{"name":"benign prostatic Hypertrophy","type":"exact"},{"name":"benign prostatic hyperplasia","type":"exact"},{"name":"benign prostatic hyperplasia (disease)","type":"exact"},{"name":"benign prostatic hyperplasia - BPH","type":"exact"},{"name":"benign prostatic hypertrophy","type":"exact"},{"name":"prostate hypertrophy","type":"broad"},{"name":"prostatic hyperplasia, benign","type":"related"},{"name":"prostatic hypertrophy","type":"broad"}],"termid":"MONDO:0010811","xrefs":{"Monarch":{"xref_id":"0010811"}}}


id: SO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA between two loop anchor positions that are held in close physical proximity.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"},{"relation_name":"overlaps","term_name":"topologically_associated_domain","termid":"SO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_loop","synonyms":[{"name":"DNA loop","type":"exact"}],"termid":"SO:0002307"}


id: MONDO:0012123
data:
  {"annotated_genes":["SJAG_02903"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86228],"is_not":false,"summary":null,"term":"MONDO:0012123"}]},"cv_name":"mondo","definition":"The CDG (Congenital Disorders of Glycosylation) syndromes are a group of autosomal recessive disorders affecting glycoprotein synthesis. CDG syndrome type Ie is characterized by psychomotor delay, seizures, hypotonia, facial dysmorphism and microcephaly. Ocular anomalies are also very common.","definition_xrefs":["Orphanet:79322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02903":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation type 1E","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C535743","MEDGEN:324784","SCTID:725078006","NCIT:C126871","UMLS:C1837396","GARD:9831","OMIM:608799","DOID:0080557"],"synonyms":[{"name":"CDG 1E","type":"related"},{"name":"CDG Ie","type":"related"},{"name":"CDG syndrome type Ie","type":"exact"},{"name":"CDG-Ie","type":"exact"},{"name":"CDG1E","type":"exact"},{"name":"CDGIe","type":"exact"},{"name":"DPM1 congenital disorder of glycosylation","type":"exact"},{"name":"DPM1-CDG","type":"related"},{"name":"DPM1-CDG (CDG-Ie)","type":"related"},{"name":"Dol-P-mannosyltransferase deficiency","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Ie","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1E","type":"related"},{"name":"congenital disorder of glycosylation caused by mutation in DPM1","type":"exact"},{"name":"congenital disorder of glycosylation type 1E","type":"exact"},{"name":"congenital disorder of glycosylation type 1e","type":"exact"},{"name":"congenital disorder of glycosylation type Ie","type":"exact"},{"name":"congenital disorder of glycosylation, type Ie","type":"related"}],"termid":"MONDO:0012123","terms_by_termid":{"MONDO:0012123":null},"xrefs":{"Monarch":{"xref_id":"0012123"}}}


id: PBO:0072412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 17","termid":"PBO:0072412"}


id: PR:P87320
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msp1 gene.","definition_xrefs":["UniProtKB:P87320","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein msp1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.06","synonyms":[{"name":"Spom972h-msp1","type":"exact"}],"termid":"PR:P87320"}


id: GO:0004878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C5a product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:pg","ISBN:0781735149","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"},{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"complement component C5a receptor activity","secondary_identifiers":["GO:0004944"],"synonyms":[{"name":"C5a anaphylatoxin receptor activity","type":"related"}],"termid":"GO:0004878"}


id: SO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is part of a promoter.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000832 promoter_region (obsolete SO:0000832)","termid":"SO:0000832"}


id: PBO:0110461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator for ribosomal proteins via TOR signaling pathway Ifh1","termid":"PBO:0110461"}


id: SO:0001808
data:
  {"annotated_genes":["SJAG_05271","SJAG_00659","SJAG_02217","SJAG_00695","SJAG_02353"],"annotation_feature_type":"gene","cv_annotations":{"sequence":[{"annotations":[80318,80319,80400,80538,80557],"is_not":false,"summary":null,"term":"SO:0001808"}]},"cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the mitochondrion.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00659":null,"SJAG_00695":null,"SJAG_02217":null,"SJAG_02353":null,"SJAG_05271":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"mitochondrial_targeting_signal","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"MTS","type":"exact"},{"name":"mitochondrial signal sequence","type":"exact"},{"name":"mitochondrial targeting signal","type":"exact"}],"termid":"SO:0001808","terms_by_termid":{"SO:0001808":null}}


id: GO:0080041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-ribose + H2O = AMP + ribose-1-phosphate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-sugar diphosphatase activity","termid":"GO:0019144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ADP-ribose pyrophosphohydrolase activity","termid":"GO:0080041"}


id: GO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the tissue kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinin cascade","termid":"GO:0002256"},{"relation_name":"regulates","term_name":"tissue kallikrein-kinin cascade","termid":"GO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"regulation of tissue kallikrein-kinin cascade","synonyms":[{"name":"regulation of glandular kallikrein-kinin cascade","type":"exact"}],"termid":"GO:0002382"}


id: PBO:0081097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 22","termid":"PBO:0081097"}


id: PBO:0060853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK2 pseudogene 1","termid":"PBO:0060853"}


id: PBO:0042865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 97","termid":"PBO:0042865"}


id: GO:1905788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of detection of mechanical stimulus involved in sensory perception of touch.","definition_xrefs":["PMID:8692859","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nervous system process","termid":"GO:0031645"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:1905787"},{"relation_name":"negatively_regulates","term_name":"detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:0050976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"down regulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"down regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"down regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"down regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"down regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"down regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"down regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"down-regulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"down-regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"down-regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"down-regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"down-regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"down-regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"down-regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"downregulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"downregulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"downregulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"downregulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"downregulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"downregulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"downregulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"inhibition of detection of mechanical stimulus involved in sensory perception of touch","type":"narrow"},{"name":"inhibition of perception of touch, detection of mechanical stimulus","type":"narrow"},{"name":"inhibition of perception of touch, sensory detection of mechanical stimulus","type":"narrow"},{"name":"inhibition of perception of touch, sensory transduction of mechanical stimulus","type":"narrow"},{"name":"inhibition of sensory detection of mechanical stimulus during perception of touch","type":"narrow"},{"name":"inhibition of sensory transduction of mechanical stimulus during perception of touch","type":"narrow"},{"name":"inhibition of tactition, sensory detection of mechanical stimulus","type":"narrow"},{"name":"negative regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"negative regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"negative regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"negative regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"negative regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"negative regulation of tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:1905788"}


id: MONDO:0007161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 2","secondary_identifiers":["UMLS:C1862459","MEDGEN:400056","DOID:0070164","GARD:15041","OMIM:108420"],"synonyms":[{"name":"Aspermiogenesis Factor","type":"related"},{"name":"SPGF2","type":"exact"},{"name":"spermatogenic failure 2","type":"exact"}],"termid":"MONDO:0007161","xrefs":{"Monarch":{"xref_id":"0007161"}}}


id: MOD:00977
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium containing modified residue","termid":"MOD:00747"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disodium salt","termid":"MOD:00977"}


id: PBO:0113155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone variant H2A.Z; exchanged for histone H2A in nucleosomes by the SWR1 complex; involved in transcriptional regulation through prevention of the spread of silent heterochromatin; Htz1p-containing nucleosomes facilitate RNA Pol II passage by affecting correct assembly and modification status of RNA Pol II elongation complexes and by favoring efficient nucleosome remodeling","termid":"PBO:0113155"}


id: PBO:0086750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; predicted to encode a triose phosphate transporter subfamily member based on phylogenetic analysis; similar to YOR307C/SLY41; deletion mutant has a respiratory growth defect","termid":"PBO:0086750"}


id: GO:0097267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which arachidonic acid is converted to other compounds initially by omega-hydroxylation.","definition_xrefs":["PMID:10681399","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate metabolic process","termid":"GO:0019369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"omega-hydroxylase P450 pathway","secondary_identifiers":["Reactome:R-HSA-2142816"],"synonyms":[{"name":"P450 omega-hydroxylase pathway","type":"exact"}],"termid":"GO:0097267"}


id: PBO:0061664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 42","termid":"PBO:0061664"}


id: GO:0035848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the oviduct are generated and organized. An oviduct is a tube through which an ova passes from the ovary to the uterus, or from the ovary to the outside of the organism.","definition_xrefs":["GOC:yaf","PMID:22918811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"oviduct development","termid":"GO:0060066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oviduct morphogenesis","synonyms":[{"name":"fallopian tube morphogenesis","type":"narrow"}],"termid":"GO:0035848"}


id: GO:0070080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a titin Z protein domain, which recognizes and binds to the C-terminal calmodulin-like domain of alpha-actinin-2 (Act-EF34), adopts a helical structure, and binds in a groove formed by the two planes between the helix pairs of Act-EF34.","definition_xrefs":["InterPro:IPR015129","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"titin Z domain binding","synonyms":[{"name":"Z repeat domain binding","type":"exact"}],"termid":"GO:0070080"}


id: GO:0048601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of an oocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of an oocyte.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte morphogenesis","synonyms":[{"name":"oocyte morphogenesis during differentiation","type":"exact"}],"termid":"GO:0048601"}


id: MONDO:0012063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulnar/fibula ray defect - brachydactyly syndrome is a very rare malformation syndrome characterized by ulnar hypoplasia associated with hypoplastic to absent fourth and/or fifth digits, fibular hypoplasia, short stature and facial dysmorphism.","definition_xrefs":["Orphanet:52056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulnar/fibula ray defect-brachydactyly syndrome","secondary_identifiers":["SCTID:719843001","GARD:16654","UMLS:C1837830","MESH:C563905","OMIM:608571","MEDGEN:324890"],"synonyms":[{"name":"Morava-Mehes syndrome","type":"exact"},{"name":"ulnar/fibular RAY defect and brachydactyly","type":"related"}],"termid":"MONDO:0012063","xrefs":{"Monarch":{"xref_id":"0012063"}}}


id: GO:0141032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host actin cytoskeleton by reorganizing the actin filaments, in a way that keeps the total filementous actin remains approximately constant. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:31130928","PMID:22212282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via actin filament reorganization","synonyms":[{"name":"perturbation by symbiont of host actin cytoskeleton via actin filament rearrangement","type":"exact"},{"name":"perturbation by symbiont of host actin cytoskeleton via actin filament reorganization","type":"exact"}],"termid":"GO:0141032"}


id: MONDO:0011414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peters anomaly (PA) is a congenital corneal opacity disorder characterized by a central corneal leukoma that obstructs the pupil leading to visual loss as well as absence of the posterior corneal stroma and Descemet membrane.","definition_xrefs":["Orphanet:708"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete corneoiridogoniodysgenesis (obsolete MONDO:0020220)","termid":"MONDO:0020220"},{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"},{"relation_name":"is_a","term_name":"anterior segment dysgenesis","termid":"MONDO:0019503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Peters anomaly","secondary_identifiers":["HP:0000659","OMIM:604229","DOID:0060673","GARD:7377","ICD9:743.44","MESH:C537884","SCTID:204153003","UMLS:C0344559","DOID:0080610","MEDGEN:91031","MedDRA:10059202","icd11.foundation:1902926622"],"synonyms":[{"name":"ASGD5","type":"related"},{"name":"Peters anomaly","type":"exact"},{"name":"Peters anomaly (disease)","type":"exact"},{"name":"Peters congenital glaucoma","type":"exact"},{"name":"anterior segment dysgenesis 5","type":"related"},{"name":"anterior segment dysgenesis 5, multiple subtypes","type":"exact"}],"termid":"MONDO:0011414","xrefs":{"Monarch":{"xref_id":"0011414"}}}


id: PBO:0068961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 205, pseudogene","termid":"PBO:0068961"}


id: MONDO:0005118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tick-borne, infectious disease caused by Anaplasma phagocytophilum, an obligate intracellular bacterium that is typically transmitted to humans by ticks of the Ixodes ricinus species complex.","definition_xrefs":["Wikipedia:Human_granulocytic_anaplasmosis"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ehrlichiosis","termid":"MONDO:0016003"},{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"anaplasmosis","termid":"MONDO:0025303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"human granulocytic ehrlichiosis","secondary_identifiers":["MEDGEN:96911","ICD9:082.49","SCTID:85708001","UMLS:C0483368","EFO:0000777","GARD:71","DOID:0050025"],"synonyms":[{"name":"HGE","type":"broad"},{"name":"human anaplasmosis caused by Anaplasma phagocytophilum","type":"related"},{"name":"human anaplasmosis due to Anaplasma phagocytophilum","type":"exact"},{"name":"human ehrlichial infection, human granulocytic type","type":"related"},{"name":"human granulocytic anaplasmosis","type":"exact"},{"name":"human granulocytic ehrlichiosis","type":"exact"},{"name":"infection by Anaplasma phagocytophilum","type":"related"}],"termid":"MONDO:0005118","xrefs":{"Monarch":{"xref_id":"0005118"}}}


id: MONDO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cancer of long bone of lower limb","termid":"MONDO:0000952"},{"relation_name":"is_a","term_name":"cancer affecting bone of limb skeleton","termid":"MONDO:0024311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cancer of short bone of lower limb","secondary_identifiers":["ICD9:170.8","ICD10CM:C40.3","DOID:10151","MEDGEN:509319","SCTID:712525007","UMLS:C0153518"],"synonyms":[{"name":"malignant neoplasm of short bone of lower limb","type":"exact"},{"name":"malignant neoplasm of short bones of leg","type":"exact"}],"termid":"MONDO:0000953","xrefs":{"Monarch":{"xref_id":"0000953"}}}


id: MONDO:0024318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral infection of central nervous system","secondary_identifiers":["UMLS:C0348165","ICD10WHO:A80-A89","ICD10CM:A80-A89","MESH:D020805","SCTID:302810003","MEDGEN:91141"],"synonyms":[{"name":"central nervous system viral infection","type":"related"},{"name":"viral disease of central nervous system","type":"related"},{"name":"viral infection of central nervous system","type":"exact"}],"termid":"MONDO:0024318","xrefs":{"Monarch":{"xref_id":"0024318"}}}


id: PBO:0064327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLS1 antisense RNA 1","termid":"PBO:0064327"}


id: PR:O94581
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.08c","synonyms":[{"name":"Spom972h-cox12","type":"exact"},{"name":"cytochrome c oxidase polypeptide VIb (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94581"}


id: PBO:0029194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_kinetochore","termid":"PBO:0029194"}


id: PBO:0072901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cancer cell invasion","termid":"PBO:0072901"}


id: PBO:0042874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 126","termid":"PBO:0042874"}


id: PR:O94421
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snf22 gene.","definition_xrefs":["UniProtKB:O94421","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF chromatin-remodeling complex subunit snf22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.14c","synonyms":[{"name":"ATP-dependent helicase snf22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SWI/SNF complex subunit snf22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snf22","type":"exact"}],"termid":"PR:O94421"}


id: PBO:0073076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDE2 telomere maintenance homolog","termid":"PBO:0073076"}


id: GO:0033058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another along an axis.","definition_xrefs":["GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"directional locomotion","termid":"GO:0033058"}


id: PBO:0087427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit beta1 of the nascent polypeptide-associated complex (NAC); involved in protein targeting, associated with cytoplasmic ribosomes; enhances DNA binding of the Gal4p activator; homolog of human BTF3b; EGD1 has a paralog, BTT1, that arose from the whole genome duplication","termid":"PBO:0087427"}


id: FYPO:0006145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to copper ions is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:24569997","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion during meiotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper during meiotic cell cycle","type":"exact"},{"name":"decreased RNA level during meiotic cell cycle during copper excess","type":"related"},{"name":"decreased transcript level during cellular response to copper ion during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006145"}


id: GO:1901638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any copper ion import that takes place in ascospore-type prospore.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete copper ion import into ascospore-type prospore (obsolete GO:1901638)","synonyms":[{"name":"copper ion import into ascospore-type prospore","type":"exact"},{"name":"copper ion uptake in ascospore-type prospore","type":"exact"}],"termid":"GO:1901638"}


id: GO:0010040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron(II) ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to iron ion","termid":"GO:0010039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to iron(II) ion","synonyms":[{"name":"response to iron(II)","type":"exact"}],"termid":"GO:0010040"}


id: MONDO:0011718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAAF3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 2","secondary_identifiers":["UMLS:C1847554","GARD:15400","DOID:0110626","MEDGEN:338258","MESH:C535277","OMIM:606763"],"synonyms":[{"name":"CILD2","type":"exact"},{"name":"DNAAF3 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 2","type":"related"},{"name":"ciliary dyskinesia, primary, 2, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 2","type":"exact"},{"name":"primary ciliary dyskinesia 2 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAAF3","type":"exact"},{"name":"primary ciliary dyskinesia type 2","type":"exact"}],"termid":"MONDO:0011718","xrefs":{"Monarch":{"xref_id":"0011718"}}}


id: PBO:0064601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU2F2 antisense RNA 2","termid":"PBO:0064601"}


id: GO:0031537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemical reactions and pathways involving anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"anthocyanin-containing compound metabolic process","termid":"GO:0046283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anthocyanin metabolic process","synonyms":[{"name":"regulation of anthocyanin metabolism","type":"exact"}],"termid":"GO:0031537"}


id: PBO:0081545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 461","termid":"PBO:0081545"}


id: MONDO:0010310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopathia striata with cranial sclerosis (OS-CS) is a bone dysplasia characterized by longitudinal striations of the metaphyses of the long bones, sclerosis of the craniofacial bones, macrocephaly, cleft palate and hearing loss.","definition_xrefs":["Orphanet:2780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis","termid":"MONDO:0017198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopathia striata with cranial sclerosis","secondary_identifiers":["DOID:0060886","GARD:4148","ICD9:733.99","OMIM:300373","MEDGEN:96590","SCTID:254129003","MESH:C536053","UMLS:C0432268"],"synonyms":[{"name":"OSCS","type":"related"},{"name":"Osteopathia striata with cranial sclerosis, X-linked dominant","type":"exact"},{"name":"Robinow-Unger syndrome","type":"exact"},{"name":"hyperostosis generalisata with striations","type":"exact"},{"name":"osteopathia striata - cranial sclerosis","type":"related"},{"name":"osteopathia striata cranial sclerosis","type":"related"},{"name":"osteopathia striata with cranial sclerosis","type":"exact"},{"name":"osteopathia striata-cranial sclerosis syndrome","type":"related"}],"termid":"MONDO:0010310","xrefs":{"Monarch":{"xref_id":"0010310"}}}


id: PATO:0001091
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001091 relative elasticity value (obsolete PATO:0001091)","termid":"PATO:0001091"}


id: PBO:0005456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sir2 family histone deacetylase Hst2","termid":"PBO:0005456"}


id: PBO:0031662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_modification_during_vegetative_growth","termid":"PBO:0031662"}


id: GO:0035820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensin decreases the amount of sodium that is excreted in urine over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of renal output by angiotensin","termid":"GO:0003083"},{"relation_name":"is_a","term_name":"negative regulation of renal sodium excretion","termid":"GO:0035814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of renal sodium excretion by angiotensin","termid":"GO:0035820"}


id: GO:0036170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to deprivation of nourishment.","definition_xrefs":["GOC:di","PMID:17554048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"},{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:0036170"}


id: PBO:0001018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer gamma subunit Sec21 (predicted)","termid":"PBO:0001018"}


id: MONDO:0021008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An antiphospholipid syndrome that occurs alongside another autoimmune disorder.","direct_ancestors":[{"relation_name":"is_a","term_name":"antiphospholipid syndrome","termid":"MONDO:8000010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"secondary antiphospholipid syndrome","secondary_identifiers":["MEDGEN:592743","ICD9:795.79","SCTID:239895006","icd11.foundation:138987181","UMLS:C0409983"],"termid":"MONDO:0021008","xrefs":{"Monarch":{"xref_id":"0021008"}}}


id: MOD:01429
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms an adduct with a (15)N labeled compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(15)N isotope tagged reagent","termid":"MOD:01429"}


id: FYPO:0005373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to methyl methanesulfonate (MMS) is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to MMS.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal cell cycle regulation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal cell cycle regulation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell cycle delay following methyl methanesulfonate exposure","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to MMS","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to methyl methanesulphonate","type":"exact"},{"name":"normal mitotic cell cycle regulation in response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005373"}


id: PBO:0084274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; required for the biogenesis of ER-derived COPII transport vesicles; interacts with Yif1p and Yos1p; localizes to the Golgi, the ER, and COPII vesicles; human homolog YIPF5 can complement yeast yip1 mutant","termid":"PBO:0084274"}


id: GO:2001006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan biosynthetic process","termid":"GO:0032951"},{"relation_name":"regulates","term_name":"cellulose biosynthetic process","termid":"GO:0030244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cellulose biosynthetic process","synonyms":[{"name":"regulation of cellulose anabolism","type":"exact"},{"name":"regulation of cellulose biosynthesis","type":"exact"},{"name":"regulation of cellulose formation","type":"exact"},{"name":"regulation of cellulose synthesis","type":"exact"}],"termid":"GO:2001006"}


id: PBO:0014270
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CAR1","termid":"PBO:0014270"}


id: PBO:0062442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 106 pseudogene","termid":"PBO:0062442"}


id: PBO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.3","termid":"PBO:0001055"}


id: PBO:0043909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine receptor like factor 2","termid":"PBO:0043909"}


id: PBO:0062913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P2RX5-TAX1BP3 readthrough (NMD candidate)","termid":"PBO:0062913"}


id: MONDO:0005380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A none disease characterized by death of bone tissue due to a lack of blood supply.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare rheumatologic disease (obsolete MONDO:0015940)","termid":"MONDO:0015940"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteonecrosis","secondary_identifiers":["DOID:0080008","NCIT:C35476","Orphanet:399158","NORD:1537","ICD9:733.42","EFO:0004259","DOID:10159","UMLS:C0029445","ICD9:733.49","icd11.foundation:536467755","SCTID:240196003","ICD9:733.41","ICD9:733.44","NCIT:C34880","ICD9:732.3","ICD9:733.43","GARD:21657","ICD10CM:M87","MEDGEN:45249","MESH:D010020","ICD9:733.4"],"synonyms":[{"name":"aseptic necrosis","type":"exact"},{"name":"bone necrosis","type":"exact"},{"name":"ischaemic bone disease","type":"exact"},{"name":"ischemic bone disease","type":"exact"},{"name":"osteonecrosis","type":"exact"}],"termid":"MONDO:0005380","xrefs":{"Monarch":{"xref_id":"0005380"}}}


id: PBO:0055124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2543","termid":"PBO:0055124"}


id: PBO:0065959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD23B pseudogene 1","termid":"PBO:0065959"}


id: PBO:0055160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2579","termid":"PBO:0055160"}


id: PBO:0029273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_MCB_promoters_during_cellular_response_to_hydroxyurea","termid":"PBO:0029273"}


id: GO:0022027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"cell proliferation in forebrain","termid":"GO:0021846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"interkinetic nuclear migration","termid":"GO:0022027"}


id: GO:0140859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + medicarpin = 4'-methoxyisoflavan-2',4,7-triol.","definition_xrefs":["RHEA:35407","PMID:7805842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"pterocarpan synthase activity","secondary_identifiers":["EC:4.2.1.139"],"synonyms":[{"name":"2',7-dihydroxy-4'-methoxyisoflavanol dehydratase activity","type":"exact"},{"name":"2'-hydroxyisoflavanol 4,2'-dehydratase activity","type":"exact"},{"name":"7,2'-dihydroxy-4'-methoxyisoflavanol dehydratase activity","type":"exact"},{"name":"medicarpan synthase activity","type":"exact"},{"name":"medicarpin synthase activity","type":"exact"}],"termid":"GO:0140859"}


id: PBO:0062036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 5","termid":"PBO:0062036"}


id: GO:1990813
data:
  {"annotated_genes":["SJAG_04126","SJAG_00600","SJAG_00229","SJAG_04259","SJAG_01082","SJAG_03681","SJAG_03926","SJAG_01601","SJAG_03989","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93594,98926,101073,101593,104293,107618,113018,113572,114289,115694],"is_not":false,"summary":null,"term":"GO:1990813"}]},"cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome centromeric region is maintained during homologous chromosome segregation at meiotic anaphase I after cohesin is cleaved by separase along the arm regions.","definition_xrefs":["PMID:14730319","PMID:25533956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"meiotic centromeric cohesion protection in anaphase I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"anaphase cohesion protection","type":"exact"},{"name":"protection of centromeric cohesion during meiotic anaphase I","type":"exact"}],"termid":"GO:1990813","terms_by_termid":{"GO:1990813":null}}


id: GO:0060341
data:
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