# terms

id: MONDO:0005226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute basophilic leukemia (obsolete MONDO:0005226)","termid":"MONDO:0005226","xrefs":{"Monarch":{"xref_id":"0005226"}}}


id: FYPO:0000202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of cytokinetic cell separation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of cytokinetic cell separation","synonyms":[{"name":"abnormal regulation of cell separation after cytokinesis","type":"exact"},{"name":"abnormal regulation of cell separation following cytokinesis","type":"exact"},{"name":"abnormal regulation of cytokinetic cell separation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of cytokinetic cell separation during vegetative growth","type":"exact"},{"name":"abnormal regulation of mitotic cytokinetic cell separation","type":"exact"}],"termid":"FYPO:0000202"}


id: PBO:0116766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC33 antisense RNA 1","termid":"PBO:0116766"}


id: PBO:0030642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_raffinose_carbon_source","termid":"PBO:0030642"}


id: MONDO:0013424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 3p is a rare chromosomal anomaly syndrome, resulting from a partial deletion of the short arm of chromosome 3, with a highly variable phenotype typically characterized by pre- and post-natal growth retardation, intellectual disability, developmental delay and craniofacial dysmorphism (microcephaly, trigonocephaly, downslanting palpebral fissures, telecanthus, ptosis, micrognathia). Postaxial polydactyly, hypotonia, renal anomalies and congenital heart defects (e.g. atrioventricular septal defect) may be associated.","definition_xrefs":["Orphanet:1620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 3","termid":"MONDO:0016885"},{"relation_name":"is_a","term_name":"blepharophimosis - intellectual disability syndrome","termid":"MONDO:0017393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3p- syndrome","secondary_identifiers":["NCIT:C41377","DOID:0060417","GARD:3750","UMLS:C4706503","SCTID:763528002","MESH:C536804","NORD:951","MEDGEN:1643555","OMIM:613792"],"synonyms":[{"name":"3p deletion","type":"related"},{"name":"3p monosomy","type":"related"},{"name":"3p- syndrome","type":"exact"},{"name":"Chromosome 3, Monosomy 3p","type":"exact"},{"name":"Del(3p) syndrome","type":"related"},{"name":"chromosome 3, monosomy 3p25","type":"related"},{"name":"chromosome 3p deletion","type":"related"},{"name":"chromosome 3p- syndrome","type":"related"},{"name":"chromosome 3pter-p25 deletion syndrome","type":"exact"},{"name":"del(3p25)","type":"related"},{"name":"deletion 3p","type":"related"},{"name":"deletion 3p25","type":"related"},{"name":"distal 3p deletion","type":"exact"},{"name":"distal monosomy 3p","type":"exact"},{"name":"distal monosomy type 3p","type":"exact"},{"name":"monosomy 3p","type":"related"},{"name":"monosomy 3pter","type":"exact"},{"name":"partial monosomy 3p","type":"related"},{"name":"telomeric monosomy 3p","type":"exact"}],"termid":"MONDO:0013424","xrefs":{"Monarch":{"xref_id":"0013424"}}}


id: PBO:0075662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, non-erythrocytic 2","termid":"PBO:0075662"}


id: GO:0016622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","secondary_identifiers":["EC:1.2.2.-"],"termid":"GO:0016622"}


id: GO:1901616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of organic hydroxy compound.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete organic hydroxy compound catabolic process (obsolete GO:1901616)","synonyms":[{"name":"organic hydroxy compound breakdown","type":"exact"},{"name":"organic hydroxy compound catabolism","type":"exact"},{"name":"organic hydroxy compound degradation","type":"exact"}],"termid":"GO:1901616"}


id: PBO:0089873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S10","termid":"PBO:0089873"}


id: PBO:0049404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 1C","termid":"PBO:0049404"}


id: PBO:0028114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snoRNA_guided_rRNA_2'-O-methylation_abolished_at_specific_site","termid":"PBO:0028114"}


id: FYPO:0005025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation does not occur in centromeric regions (i.e. adjacent to the kinetochores).","definition_xrefs":["PomBase:mah","PMID:21633354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic chromosome condensation","termid":"FYPO:0003844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000631","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0000337","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitotic chromosome centromere condensation","synonyms":[{"name":"abolished chromosome centromere condensation during mitotic cell cycle","type":"related"},{"name":"abolished mitotic chromosome centromere condensation during vegetative growth","type":"exact"},{"name":"abolished mitotic chromosome condensation at centromere","type":"exact"},{"name":"mitotic chromosome condensation abolished at centromere","type":"exact"},{"name":"mitotic chromosome kinetochore condensation","type":"exact"}],"termid":"FYPO:0005025"}


id: PBO:0085143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein that mediates homolog segregation during meiosis I; forms a complex with Lrs4p and then Mam1p at kinetochores; required for condensin recruitment to the replication fork barrier site and rDNA repeat segregation","termid":"PBO:0085143"}


id: GO:0033561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the rate or extent of water loss from an organism via the skin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of water loss via skin (obsolete GO:0033561)","synonyms":[{"name":"skin barrier function","type":"related"}],"termid":"GO:0033561"}


id: PBO:0059683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 49","termid":"PBO:0059683"}


id: FYPO:0005743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal invertase activity during glucose starvation","synonyms":[{"name":"normal beta-fructofuranosidase activity during glucose starvation","type":"exact"},{"name":"normal invertase activity during cellular response to glucose starvation","type":"exact"},{"name":"normal invertase activity during glucose depletion","type":"exact"},{"name":"normal invertase activity during glucose deprivation","type":"exact"},{"name":"normal invertase activity during glucose limitation","type":"related"}],"termid":"FYPO:0005743"}


id: GO:0090059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the protoxylem over time, from its formation to the mature structure. The protoxylem comprises the first formed elements of the primary xylem.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem development","termid":"GO:0010089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protoxylem development","termid":"GO:0090059"}


id: MONDO:0006585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skin findings arising from repeated rubbing, picking or scratching of a real or imagined irritation of the skin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"neurodermatitis","secondary_identifiers":["EFO:1000740","DOID:3309","MESH:D009450","MEDGEN:45056","NCIT:C111963","UMLS:C0027822","SCTID:267854005"],"synonyms":[{"name":"lichen simplex Chronicus","type":"exact"}],"termid":"MONDO:0006585","xrefs":{"Monarch":{"xref_id":"0006585"}}}


id: MONDO:0007186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic disorder characterized by reflux of the gastric and/or duodenal contents into the distal esophagus. It is usually caused by incompetence of the lower esophageal sphincter. Symptoms include heartburn and acid indigestion. It may cause injury to the esophageal mucosa.","definition_xrefs":["NCIT:C26781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastroesophageal reflux disease","secondary_identifiers":["ICD9:530.81","UMLS:C0017168","SCTID:235595009","EFO:0003948","MESH:D005764","DOID:8534","OMIM:109350","MEDGEN:6553"],"synonyms":[{"name":"GERD","type":"exact"},{"name":"GERD - gastro-esophageal reflux disease","type":"exact"},{"name":"Gastresophageal reflux","type":"exact"},{"name":"acid reflux","type":"exact"},{"name":"gastro-esophageal reflux","type":"exact"},{"name":"gastroesophageal reflux","type":"exact"},{"name":"gastroesophageal reflux disease","type":"exact"},{"name":"gastroesophageal reflux, paediatric","type":"related"},{"name":"gastroesophageal reflux, pediatric","type":"related"},{"name":"ger","type":"related"}],"termid":"MONDO:0007186","xrefs":{"Monarch":{"xref_id":"0007186"}}}


id: MONDO:0018588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, systemic amyloidosis characterized by slowly progressive renal disease presenting with proteinuria, hypertension and decreased glomerular filtration rate leading to progressive renal failure. Histology reveals amyloid deposits of leukocyte chemotactic factor-2 protein in the renal cortical interstitium, tubular basement membranes, glomeruli and the vessel walls. Extra-renal deposits can be seen in the liver, lungs, spleen and adrenal glands.","definition_xrefs":["Orphanet:439224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"ALECT2 amyloidosis","secondary_identifiers":["icd11.foundation:1363099940","GARD:21827","MEDGEN:1801621","UMLS:C5680047"],"synonyms":[{"name":"LECT2 amyloidosis","type":"exact"},{"name":"leukocyte chemotactic factor-2 amyloidosis","type":"exact"}],"termid":"MONDO:0018588","xrefs":{"Monarch":{"xref_id":"0018588"}}}


id: MONDO:0013193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any thyrotoxic periodic paralysis in which the cause of the disease is a mutation in the KCNJ18 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"thyrotoxic periodic paralysis","termid":"MONDO:0019201"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotoxic periodic paralysis, susceptibility to, 2","secondary_identifiers":["OMIM:613239","UMLS:C2750473","MEDGEN:413851"],"synonyms":[{"name":"KCNJ18 thyrotoxic periodic paralysis","type":"exact"},{"name":"TTPP2","type":"related"},{"name":"thyrotoxic periodic paralysis caused by mutation in KCNJ18","type":"exact"},{"name":"thyrotoxic periodic paralysis, susceptibility to, 2","type":"exact"},{"name":"thyrotoxic periodic paralysis, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0013193","xrefs":{"Monarch":{"xref_id":"0013193"}}}


id: FYPO:0002785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which riboflavin binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal riboflavin binding","termid":"FYPO:0002388"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished riboflavin binding","synonyms":[{"name":"riboflavin binding abolished","type":"exact"}],"termid":"FYPO:0002785"}


id: PBO:0075440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member N5","termid":"PBO:0075440"}


id: MONDO:0011102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the TECTA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 12","secondary_identifiers":["GARD:18107","MESH:C563295","DOID:0110544","OMIM:601543","UMLS:C1832187","MEDGEN:321902"],"synonyms":[{"name":"DFNA12","type":"narrow"},{"name":"DFNA8","type":"narrow"},{"name":"TECTA autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 12","type":"narrow"},{"name":"autosomal dominant deafness 8","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 12","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in TECTA","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 12","type":"narrow"},{"name":"autosomal dominant nonsyndromic hearing loss 12","type":"exact"},{"name":"deafness, autosomal dominant 12","type":"narrow"},{"name":"deafness, autosomal dominant 8","type":"narrow"},{"name":"deafness, autosomal dominant 8/12","type":"narrow"},{"name":"deafness, autosomal dominant type 12","type":"narrow"}],"termid":"MONDO:0011102","xrefs":{"Monarch":{"xref_id":"0011102"}}}


id: GO:0035205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lamellocyte differentiation. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellocyte differentiation","termid":"GO:0035203"},{"relation_name":"is_a","term_name":"positive regulation of hemocyte differentiation","termid":"GO:0045612"},{"relation_name":"positively_regulates","term_name":"lamellocyte differentiation","termid":"GO:0035171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lamellocyte differentiation","synonyms":[{"name":"activation of lamellocyte differentiation","type":"narrow"},{"name":"stimulation of lamellocyte differentiation","type":"narrow"},{"name":"up regulation of lamellocyte differentiation","type":"exact"},{"name":"up-regulation of lamellocyte differentiation","type":"exact"},{"name":"upregulation of lamellocyte differentiation","type":"exact"}],"termid":"GO:0035205"}


id: PBO:0045634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 46 (pseudogene)","termid":"PBO:0045634"}


id: PBO:0086998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reverse transcriptase subunit of the telomerase holoenzyme; essential for telomerase core catalytic activity, involved in other aspects of telomerase assembly and function; mutations in human homolog are associated with aplastic anemia","termid":"PBO:0086998"}


id: MONDO:0012711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripapillary atrophy, beta type","secondary_identifiers":["OMIM:611650","MEDGEN:409689","MESH:C566898","UMLS:C1968838"],"synonyms":[{"name":"Beta-PPA","type":"related"},{"name":"PPAB","type":"related"},{"name":"peripapillary atrophy, BETA type","type":"related"},{"name":"peripapillary atrophy, beta type","type":"exact"},{"name":"peripapillary chorioretinal atrophy, Beta type","type":"related"}],"termid":"MONDO:0012711","xrefs":{"Monarch":{"xref_id":"0012711"}}}


id: PBO:0041158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 13","termid":"PBO:0041158"}


id: PBO:0038493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 4","termid":"PBO:0038493"}


id: PBO:0073033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretin","termid":"PBO:0073033"}


id: MONDO:0012708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lateral sclerosis","termid":"MONDO:0018155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"primary lateral sclerosis, adult, 1","secondary_identifiers":["OMIM:611637","MEDGEN:369357","UMLS:C1968845","MESH:C566900"],"synonyms":[{"name":"PLSA1","type":"exact"},{"name":"Pls, adult","type":"related"},{"name":"primary lateral sclerosis, ADULT, 1","type":"related"}],"termid":"MONDO:0012708","xrefs":{"Monarch":{"xref_id":"0012708"}}}


id: PR:O59734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small nuclear ribonucleoprotein F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03376","PANTHER:PTHR11021:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein F (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.14","secondary_identifiers":["UniProtKB:O59734"],"synonyms":[{"name":"Sm protein F (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Sm-F (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SmF (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNRPF","type":"exact"},{"name":"snRNP-F (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59734"}


id: PBO:0071990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 19","termid":"PBO:0071990"}


id: GO:0004970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transmembrane transfer of an ion by a channel that opens when glutamate has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate receptor activity","termid":"GO:0008066"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215","GO:0038023"],"is_obsolete":false,"name":"glutamate-gated receptor activity","synonyms":[{"name":"ionotropic glutamate receptor activity","type":"exact"}],"termid":"GO:0004970"}


id: PBO:0083465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene MRPL38","termid":"PBO:0083465"}


id: MONDO:0015665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scleromyxedema is a rare, severe skin disorder. Signs and symptoms include abnormal accumulation of mucin in the skin (mucinosis), causing papular and sclerodermoid bumps; increased production of fibroblasts (connective tissue cells) in the absence of a thyroid disorder; and monoclonal gammopathy (abnormal proteins in the blood). It often involves internal organs and may affect various body systems. The cause of scleromyxedema is not known. There is no standard treatment. Management may involve the use of intravenous immunoglobulin (IVIG), plasmapheresis, thalidomide and corticoids, or more aggressive interventions, such as autologous bone marrow transplantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"lichen myxedematosus","termid":"MONDO:0018432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"scleromyxedema","secondary_identifiers":["SCTID:402468007","GARD:7615","NCIT:C85061","Orphanet:167635","ICD9:701.8","UMLS:C0263390","MESH:D053718","MedDRA:10055046","MEDGEN:120476"],"synonyms":[{"name":"Arndt-Gottron disease","type":"exact"},{"name":"Scleromyxedema","type":"exact"},{"name":"generalised lichenoid papular eruption","type":"exact"},{"name":"generalised papular and sclerodermoid","type":"related"},{"name":"generalised papular and sclerodermoid lichen myxedematosus","type":"exact"},{"name":"generalized lichenoid papular eruption","type":"exact"},{"name":"generalized papular and sclerodermoid","type":"related"},{"name":"generalized papular and sclerodermoid lichen myxedematosus","type":"exact"},{"name":"lichen myxedematosus","type":"related"},{"name":"mucinosis, papular","type":"related"},{"name":"myxedematosus, lichen","type":"related"},{"name":"papular mucinosis","type":"related"},{"name":"scleromyxoedema","type":"exact"}],"termid":"MONDO:0015665","xrefs":{"Monarch":{"xref_id":"0015665"}}}


id: GO:0016613
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex containing a vanadium-iron cluster found in some species, such as Azotobacter vinelandii. It is composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase, the vanadium-iron protein, is tetrameric with an alpha2-beta2 structure, and nitrogenase reductase is a homodimer.","definition_xrefs":["PMID:3474027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogenase complex","termid":"GO:0016610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"vanadium-iron nitrogenase complex","synonyms":[{"name":"vanadium-iron nitrogenase activity","type":"related"}],"termid":"GO:0016613"}


id: GO:0060815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation of mRNAs that contribute to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"part_of","term_name":"anterior/posterior axis specification","termid":"GO:0009948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation involved in anterior/posterior axis specification","termid":"GO:0060815"}


id: GO:0030328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prenylcysteine, 3-methyl-2-buten-1-yl-cysteine, a derivative of the amino acid cysteine formed by the covalent addition of a prenyl residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenylcysteine metabolic process","termid":"GO:0030329"},{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prenylcysteine catabolic process","synonyms":[{"name":"prenylcysteine breakdown","type":"exact"},{"name":"prenylcysteine catabolism","type":"exact"},{"name":"prenylcysteine degradation","type":"exact"}],"termid":"GO:0030328"}


id: GO:2001309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the epipolythiodioxopiperazine gliotoxin, a poisonous substance produced by some species of fungi.","definition_xrefs":["GOC:di","PMID:16333108","PMID:17574915","PMID:18272357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin catabolic process","termid":"GO:0043387"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"detoxification of nitrogen compound","termid":"GO:0051410"},{"relation_name":"is_a","term_name":"gliotoxin metabolic process","termid":"GO:2001308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044248","GO:0019748","GO:0098754"],"is_obsolete":false,"name":"gliotoxin catabolic process","synonyms":[{"name":"gliotoxin breakdown","type":"exact"},{"name":"gliotoxin catabolism","type":"exact"},{"name":"gliotoxin degradation","type":"exact"}],"termid":"GO:2001309"}


id: PBO:0082630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of cytosolic iron-sulfur protein assembly (CIA) machinery; acts at a late step of Fe-S cluster assembly; forms the CIA targeting complex with Cia1p and Cia2p that directs Fe-S cluster incorporation and maturation of a subset of cytosolic and nuclear proteins involved in methionine biosynthesis, DNA replication and repair, transcription, and telomere maintenance; ortholog of human MMS19","termid":"PBO:0082630"}


id: GO:0031160
data:
  {"annotated_genes":["SJAG_04236","SJAG_02131","SJAG_01321","SJAG_05285","SJAG_03824","SJAG_03057","SJAG_03483","SJAG_03013","SJAG_02916","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87409,87410,115611],"is_not":false,"summary":null,"term":"GO:0031160"},{"annotations":[90035,108864,117584,113869,114157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005619"},{"annotations":[91562],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005631"},{"annotations":[87305],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005632"}]},"cv_name":"cellular_component","definition":"The specialized envelope lying outside the cell membrane of a spore.","definition_xrefs":["GOC:mah","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01321":null,"SJAG_02131":null,"SJAG_02916":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03483":null,"SJAG_03824":null,"SJAG_04236":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"spore wall","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spore coat","type":"exact"}],"termid":"GO:0031160","terms_by_termid":{"GO:0005619":null,"GO:0005631":null,"GO:0005632":null,"GO:0031160":null}}


id: GO:0071961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the length of the chromosome arms during mitosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic sister chromatid cohesion","termid":"GO:0007064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic sister chromatid cohesion, arms","synonyms":[{"name":"mitotic sister chromatid cohesion along arms","type":"exact"},{"name":"sister chromatid cohesion along arms at mitosis","type":"exact"}],"termid":"GO:0071961"}


id: MONDO:0019727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type III mixed cryoglobulinemia, a relatively rare clinico-serological subtype of mixed cryoglobulinemia (MC), is an immune complex disorder characterized by purpura, weakness and arthralgia and defined immunochemically by cryoglobulins containing both polyclonal IgGs and polyclonal IgMs.","definition_xrefs":["Orphanet:93555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cryoglobulinemic vasculitis","termid":"MONDO:0007407"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed cryoglobulinemia type III","secondary_identifiers":["ICD10CM:D89.1","GARD:19221","UMLS:C5680263","MEDGEN:1843066"],"synonyms":[{"name":"MC type III","type":"exact"}],"termid":"MONDO:0019727","xrefs":{"Monarch":{"xref_id":"0019727"}}}


id: PBO:0004806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose methyltransferase (predicted)","termid":"PBO:0004806"}


id: MONDO:0017323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypocalcemic rickets is a group of genetic diseases characterized by hypocalcemia and rickets. It comprises hypocalcemic vitamin D dependent rickets (VDDR-I) and hypocalcemic vitamin D resistant rickets (HVDRR).","definition_xrefs":["Orphanet:289103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rickets","termid":"MONDO:0005520"},{"relation_name":"is_a","term_name":"disorders of vitamin D metabolism","termid":"MONDO:0017322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypocalcemic rickets","secondary_identifiers":["SCTID:722947004","NCIT:C131421","UMLS:C4302195","GARD:21133","MEDGEN:927864"],"synonyms":[{"name":"Calciopenic rickets","type":"exact"},{"name":"calcium deficiency rickets","type":"exact"}],"termid":"MONDO:0017323","xrefs":{"Monarch":{"xref_id":"0017323"}}}


id: PBO:0083063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroorotase; catalyzes the third enzymatic step in the de novo biosynthesis of pyrimidines, converting carbamoyl-L-aspartate into dihydroorotate","termid":"PBO:0083063"}


id: GO:2001109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lens epithelial cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"lens epithelial cell proliferation","termid":"GO:0097166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lens epithelial cell proliferation","termid":"GO:2001109"}


id: GO:0046342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CDP-diacylglycerol, CDP-1,2-diacylglycerol, a substance composed of diacylglycerol in glycosidic linkage with cytidine diphosphate.","definition_xrefs":["PMID:6147353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-diacylglycerol metabolic process","termid":"GO:0046341"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"CDP-diacylglycerol catabolic process","synonyms":[{"name":"CDP-diacylglycerol breakdown","type":"exact"},{"name":"CDP-diacylglycerol catabolism","type":"exact"},{"name":"CDP-diacylglycerol degradation","type":"exact"}],"termid":"GO:0046342"}


id: PBO:0062013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 2","termid":"PBO:0062013"}


id: MONDO:0001036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An accumulation of pus in the anterior chamber of the eye.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious anterior uveitis","termid":"MONDO:0017210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hypopyon","secondary_identifiers":["NCIT:C50593","DOID:10443","ICD9:364.05","SCTID:87807004","UMLS:C0020641","icd11.foundation:803985395","MEDGEN:43802"],"termid":"MONDO:0001036","xrefs":{"Monarch":{"xref_id":"0001036"}}}


id: PBO:0030469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_iron-sulfur_cluster_transfer","termid":"PBO:0030469"}


id: PBO:0062754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily M member 1","termid":"PBO:0062754"}


id: PBO:0027157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_arginine_level","termid":"PBO:0027157"}


id: GO:0044751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a human chorionic gonadotropin stimulus.","definition_xrefs":["PMID:21325635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to human chorionic gonadotropin","termid":"GO:0044752"},{"relation_name":"is_a","term_name":"cellular response to gonadotropin stimulus","termid":"GO:0071371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to human chorionic gonadotropin stimulus","synonyms":[{"name":"cellular response to human chorionic gonadotrophin stimulus","type":"exact"}],"termid":"GO:0044751"}


id: PBO:0080819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xyloside xylosyltransferase 1","termid":"PBO:0080819"}


id: PBO:0061896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 1, short wave sensitive","termid":"PBO:0061896"}


id: GO:0050163
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106582],"is_not":false,"summary":null,"term":"GO:0050163"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: oxaloacetate = <stereo>enol</stereo>-oxaloacetate.","definition_xrefs":["EC:5.3.2.2","RHEA:16021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","termid":"GO:0016862"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"oxaloacetate tautomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:OXALOACETATE-TAUTOMERASE-RXN","KEGG_REACTION:R00363"],"synonyms":[{"name":"oxalacetic keto-enol isomerase activity","type":"related"},{"name":"oxaloacetate keto-enol tautomerase activity","type":"related"},{"name":"oxaloacetate keto-enol-isomerase activity","type":"related"}],"termid":"GO:0050163","terms_by_termid":{"GO:0050163":null}}


id: PBO:0111780
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PHD finger","termid":"PBO:0111780"}


id: PBO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI anchored protein (predicted)","termid":"PBO:0000064"}


id: PBO:0035846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_iMTOC","termid":"PBO:0035846"}


id: GO:0007319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate that oskar mRNAs are effectively translated into protein.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"regulation of oskar mRNA translation","termid":"GO:0046011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of oskar mRNA translation","synonyms":[{"name":"down regulation of oskar mRNA translation","type":"exact"},{"name":"down-regulation of oskar mRNA translation","type":"exact"},{"name":"downregulation of oskar mRNA translation","type":"exact"},{"name":"inhibition of oskar mRNA translation","type":"narrow"}],"termid":"GO:0007319"}


id: PBO:0068667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 48, pseudogene","termid":"PBO:0068667"}


id: PBO:0088832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate (Pi) transmembrane transporter Plt1","termid":"PBO:0088832"}


id: PBO:0064095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired like homeodomain 1","termid":"PBO:0064095"}


id: PBO:0072871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SATB1 antisense RNA 1","termid":"PBO:0072871"}


id: GO:0070502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly-gamma-glutamate, a polymer of D- and/or L-glutamic acid residues linked by gamma-peptidyl bonds, that forms all or part of a bacterial capsule.","definition_xrefs":["GOC:mah","PMID:16689787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capsule organization","termid":"GO:0045230"},{"relation_name":"is_a","term_name":"poly-gamma-glutamate biosynthetic process","termid":"GO:0070501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"capsule poly-gamma-glutamate biosynthetic process","synonyms":[{"name":"capsular poly-gamma-glutamate biosynthetic process","type":"exact"},{"name":"capsule poly-gamma-glutamate anabolism","type":"exact"},{"name":"capsule poly-gamma-glutamate biosynthesis","type":"exact"},{"name":"capsule poly-gamma-glutamate formation","type":"exact"},{"name":"capsule poly-gamma-glutamate synthesis","type":"exact"}],"termid":"GO:0070502"}


id: PBO:0063855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein interacting with PRKCA 1","termid":"PBO:0063855"}


id: GO:0010021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amylopectin, the (1->4) linked alpha glucose units with alpha-(1->6) linkages.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"amylopectin metabolic process","termid":"GO:2000896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amylopectin biosynthetic process","synonyms":[{"name":"amylopectin anabolism","type":"exact"},{"name":"amylopectin biosynthesis","type":"exact"},{"name":"amylopectin formation","type":"exact"},{"name":"amylopectin synthesis","type":"exact"}],"termid":"GO:0010021"}


id: MONDO:0012308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare subtype of Joubert syndrome and related disorders (JSRD) characterized by the neurological features of JS associated with renal disease, in the absence of retinopathy.","definition_xrefs":["Orphanet:220497"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"excluded_subClassOf","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome with renal defect","secondary_identifiers":["UMLS:C1846790","DOID:0110999","NCIT:C74997","GARD:10169","SCTID:716999001","OMIM:609583","MEDGEN:335526","icd11.foundation:1419767028","MESH:C536296"],"synonyms":[{"name":"JBTS4","type":"exact"},{"name":"JS-R","type":"exact"},{"name":"Joubert syndrome 4","type":"related"},{"name":"Joubert syndrome type 4","type":"exact"},{"name":"Joubert syndrome with renal anomalies","type":"related"}],"termid":"MONDO:0012308","xrefs":{"Monarch":{"xref_id":"0012308"}}}


id: PBO:0048338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 49","termid":"PBO:0048338"}


id: GO:0039548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway in a host organism by reducing the activity of host IRF3 (interferon regulatory factor-3). IRF3 is a transcription factor in the RIG-I/MDA-5 signaling pathway. Viral infection triggers phosphorylation of cytoplasmic IRF3, which allows IRF3 to form a homodimer, migrate to the nucleus, and activate transcription of IFN-alpha and IFN-beta genes.","definition_xrefs":["PMID:21632562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity","secondary_identifiers":["VZ:757"],"synonyms":[{"name":"inhibition of IRF3-dependent antiviral response","type":"related"},{"name":"inhibition of host IRF3 by virus","type":"related"},{"name":"suppression by virus of host IRF3 activity","type":"related"},{"name":"suppression by virus of host interferon regulatory factor 3","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity","type":"narrow"}],"termid":"GO:0039548"}


id: PBO:0034072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcribed_from","termid":"PBO:0034072"}


id: GO:0042577
data:
  {"annotated_genes":["SJAG_00920","SJAG_04986","SJAG_02763","SJAG_02356"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75992,76672,71062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008195"},{"annotations":[79703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042392"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phospholipid + H2O = a lipid + phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00920":null,"SJAG_02356":null,"SJAG_02763":null,"SJAG_04986":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"lipid phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0042577","terms_by_termid":{"GO:0008195":null,"GO:0042392":null}}


id: PBO:0051112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-68 (pseudogene)","termid":"PBO:0051112"}


id: PBO:0016091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin family protein Plp2 (predicted)","termid":"PBO:0016091"}


id: GO:0046966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear thyroid hormone receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"nuclear thyroid hormone receptor binding","synonyms":[{"name":"ligand-dependent thyroid hormone receptor interactor activity","type":"narrow"},{"name":"thyroid hormone receptor binding","type":"broad"}],"termid":"GO:0046966"}


id: PBO:0027951
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_pyridoxal_level","termid":"PBO:0027951"}


id: GO:0030451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the alternative pathway of complement activation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"complement activation, alternative pathway","termid":"GO:0006957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of complement activation, alternative pathway","synonyms":[{"name":"regulation of complement cascade, alternative pathway","type":"exact"}],"termid":"GO:0030451"}


id: GO:0120038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a plasma membrane bounded cell projection, a prolongation or process extending from a cell, e.g. a cilium or axon.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane bounded cell projection part (obsolete GO:0120038)","termid":"GO:0120038"}


id: GO:0030881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to beta-2-microglobulin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"beta-2-microglobulin binding","termid":"GO:0030881"}


id: PBO:0028748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_containing_anucleate_spores","termid":"PBO:0028748"}


id: GO:0106021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of vesicle docking.","definition_xrefs":["PMID:22810233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of vesicle docking","termid":"GO:0106020"},{"relation_name":"negatively_regulates","term_name":"vesicle docking","termid":"GO:0048278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140056"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0008150","GO:0140056","GO:0006810"],"is_obsolete":false,"name":"negative regulation of vesicle docking","synonyms":[{"name":"negative regulation of vesicle to membrane docking","type":"exact"}],"termid":"GO:0106021"}


id: PBO:0064857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 15A","termid":"PBO:0064857"}


id: PBO:0091265
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by C. albicans SFU1","termid":"PBO:0091265"}


id: GO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a myeloid dendritic cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell cytokine production","termid":"GO:0002371"},{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"},{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"myeloid dendritic cell cytokine production","termid":"GO:0002372"}


id: PBO:0025470
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sapk INteracting protein","termid":"PBO:0025470"}


id: PBO:0087783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VI of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; expression is regulated by oxygen levels","termid":"PBO:0087783"}


id: GO:0052353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of carbohydrate molecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont carbohydrate (obsolete GO:0052353)","termid":"GO:0052353"}


id: PBO:0039962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 5","termid":"PBO:0039962"}


id: GO:0016912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SAP kinase 5 activity (obsolete GO:0016912)","synonyms":[{"name":"SAP kinase 5 activity","type":"exact"},{"name":"SAPK5","type":"exact"}],"termid":"GO:0016912"}


id: MONDO:0003121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the middle cranial fossa.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle cranial fossa meningioma","secondary_identifiers":["UMLS:C1334757","MEDGEN:277369","DOID:4749","NCIT:C5586"],"synonyms":[{"name":"meningioma (disease) of middle cranial fossa","type":"exact"},{"name":"meningioma of middle cranial fossa","type":"exact"},{"name":"meningioma of the middle cranial fossa","type":"exact"},{"name":"middle cranial fossa meningioma (disease)","type":"exact"}],"termid":"MONDO:0003121","xrefs":{"Monarch":{"xref_id":"0003121"}}}


id: PBO:0018200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transmembrane transporter Amt1","termid":"PBO:0018200"}


id: PBO:0003949
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.11","termid":"PBO:0003949"}


id: PBO:0057282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 503","termid":"PBO:0057282"}


id: PATO:0002188
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality which inheres in a molecular entity when the molecular entity does not possess an electrical dipole.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarity","termid":"PATO:0002186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonpolar polarity","termid":"PATO:0002188"}


id: PBO:0003224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Rlp1","termid":"PBO:0003224"}


id: PBO:0068239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal N5","termid":"PBO:0068239"}


id: PBO:0044154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD phosphatase subunit 1","termid":"PBO:0044154"}


id: MONDO:0024463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 1","secondary_identifiers":["GARD:18039","MEDGEN:215397","UMLS:C0949595","DOID:0080493","OMIM:233300"],"synonyms":[{"name":"ODG1","type":"exact"},{"name":"XX gonadal dysgenesis","type":"related"},{"name":"XXGD","type":"related"},{"name":"gonadal dysgenesis, 20 type","type":"related"},{"name":"gonadal dysgenesis, XX type","type":"related"},{"name":"ovarian dysgenesis 1","type":"exact"},{"name":"ovarian dysgenesis, hypergonadotropic, autosomal recessive","type":"related"},{"name":"ovarian dysgenesis, hypergonadotropic, with normal karyotype","type":"related"},{"name":"ovarian failure, hypergonadotropic","type":"related"}],"termid":"MONDO:0024463","xrefs":{"Monarch":{"xref_id":"0024463"}}}


id: GO:1901283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5,6,7,8-tetrahydromethanopterin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"tetrahydromethanopterin metabolic process","termid":"GO:2001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"5,6,7,8-tetrahydromethanopterin metabolic process","synonyms":[{"name":"5,6,7,8-tetrahydromethanopterin metabolism","type":"exact"}],"termid":"GO:1901283"}


id: PBO:0064738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 74","termid":"PBO:0064738"}


id: PBO:0091142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial alpha-ketoglutarate dehydrogenase Ymr1 (predicted)","termid":"PBO:0091142"}


id: PBO:0074585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 3A","termid":"PBO:0074585"}


id: PBO:0069453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 718, pseudogene","termid":"PBO:0069453"}


id: GO:0031695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-2B adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"alpha-2B adrenergic receptor binding","synonyms":[{"name":"alpha-2B adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031695"}


id: MONDO:0013310
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87044],"is_not":false,"summary":null,"term":"MONDO:0013310"}]},"cv_name":"mondo","definition":"Congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency is a unique form of congenital adrenal hyperplasia (CAH) characterized by glucocorticoid deficiency, severe sexual ambiguity in both sexes and skeletal (especially craniofacial) malformations.","definition_xrefs":["Orphanet:95699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia","termid":"MONDO:0018479"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:715733000","NANDO:1200402","GARD:12664","UMLS:C1860042","DOID:0080925","icd11.foundation:497412536","MEDGEN:348008","NANDO:2200375","NCIT:C174439","OMIM:613571"],"synonyms":[{"name":"POR deficiency","type":"exact"},{"name":"PORD","type":"exact"},{"name":"adrenal hyperplasia, congenital, due to cytochrome P450 oxidoreductase deficiency","type":"related"},{"name":"congenital adrenal hyperplasia due to cytochrome POR deficiency","type":"exact"},{"name":"disordered steroidogenesis due to POR deficiency","type":"related"},{"name":"disordered steroidogenesis due to cytochrome P450 oxidoreductase","type":"related"},{"name":"disordered steroidogenesis due to cytochrome P450 oxidoreductase deficiency","type":"related"}],"termid":"MONDO:0013310","terms_by_termid":{"MONDO:0013310":null},"xrefs":{"Monarch":{"xref_id":"0013310"}}}


id: GO:0051367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The decanoylation of peptidyl-serine to form peptidyl-O3-decanoyl-L-serine, typical of the protein ghrelin.","definition_xrefs":["RESID:AA0385","GOC:jsg","PMID:12630926"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine decanoylation (obsolete GO:0051367)","termid":"GO:0051367"}


id: GO:0045928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone metabolic process","termid":"GO:0007556"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone metabolic process","termid":"GO:0006716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of juvenile hormone metabolic process","synonyms":[{"name":"down regulation of juvenile hormone metabolic process","type":"exact"},{"name":"down-regulation of juvenile hormone metabolic process","type":"exact"},{"name":"downregulation of juvenile hormone metabolic process","type":"exact"},{"name":"inhibition of juvenile hormone metabolic process","type":"narrow"},{"name":"negative regulation of juvenile hormone metabolism","type":"exact"}],"termid":"GO:0045928"}


id: GO:0062087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of vein smooth muscle contraction.","definition_xrefs":["PMID:8428203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vein smooth muscle contraction","termid":"GO:0062086"},{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle contraction","termid":"GO:1904695"},{"relation_name":"positively_regulates","term_name":"vein smooth muscle contraction","termid":"GO:0014826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vein smooth muscle contraction","termid":"GO:0062087"}


id: GO:1902260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","GOC:BHF","PMID:11299204","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"},{"relation_name":"is_a","term_name":"negative regulation of voltage-gated potassium channel activity","termid":"GO:1903817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of delayed rectifier potassium channel activity","synonyms":[{"name":"down regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"down-regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"downregulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"inhibition of delayed rectifier potassium channel activity","type":"narrow"}],"termid":"GO:1902260"}


id: MONDO:0013728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pregnancy loss, recurrent, susceptibility in which the cause of the disease is a mutation in the F2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy loss, recurrent, susceptibility to, 2","secondary_identifiers":["OMIM:614390","UMLS:C3280672","MEDGEN:482302"],"synonyms":[{"name":"F2 pregnancy loss, recurrent, susceptibility","type":"exact"},{"name":"RPRGL2","type":"related"},{"name":"pregnancy loss, recurrent, susceptibility caused by mutation in F2","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, 2","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0013728","xrefs":{"Monarch":{"xref_id":"0013728"}}}


id: PBO:0091767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific HMG-box DNA-binding transcription factor Mc at silenced MAT3 locus","termid":"PBO:0091767"}


id: PBO:0048463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucokinase","termid":"PBO:0048463"}


id: PBO:0028759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_aseptate_vegetative_cell_with_cell_cycle_arrest_in_mitotic_M_phase","termid":"PBO:0028759"}


id: GO:0000400
data:
  {"annotated_genes":["SJAG_02262","SJAG_02708","SJAG_02226","SJAG_02690","SJAG_04752","SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77765,78347,79394,94669,105876],"is_not":false,"summary":null,"term":"GO:0000400"},{"annotations":[75088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000402"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment containing four-way junctions, also known as Holliday junctions, a structure where two DNA double strands are held together by reciprocal exchange of two of the four strands, one strand each from the two original helices.","definition_xrefs":["GOC:krc","ISBN:0815332181","PMID:15563464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02226":null,"SJAG_02262":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_04752":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"four-way junction DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Holliday junction binding","type":"exact"},{"name":"forked DNA binding","type":"broad"}],"termid":"GO:0000400","terms_by_termid":{"GO:0000400":null,"GO:0000402":null}}


id: PBO:0053401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 331","termid":"PBO:0053401"}


id: MONDO:0016154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of myotubularin (obsolete MONDO:0016154)","secondary_identifiers":["Orphanet:207110"],"termid":"MONDO:0016154","xrefs":{"Monarch":{"xref_id":"0016154"}}}


id: MONDO:0006454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare primary thymic carcinoma, characterized by the presence of keratinizing or non-keratinizing malignant squamous cells. Approximately 10-20% of cases occur in combination with thymoma. The prognosis depends on the tumor stage and the degree of cellular differentiation.","definition_xrefs":["NCIT:C6455"],"gene_count":0,"genotype_count":0,"name":"obsolete thymic squamous cell carcinoma (obsolete MONDO:0006454)","termid":"MONDO:0006454","xrefs":{"Monarch":{"xref_id":"0006454"}}}


id: PBO:0088513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lis1 homology and WD repeat protein","termid":"PBO:0088513"}


id: MONDO:0025152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of chimpanzees, gorillas, and orangutans.","definition_xrefs":["MESH:D018420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human primate disease","termid":"MONDO:0025013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-human ape disease","synonyms":[{"name":"Pongidae disease","type":"related"},{"name":"Pongidae diseases","type":"related"},{"name":"ape disease","type":"related"},{"name":"disease, Pongidae","type":"related"},{"name":"disease, ape","type":"related"},{"name":"diseases, Pongidae","type":"related"},{"name":"diseases, ape","type":"related"}],"termid":"MONDO:0025152","xrefs":{"Monarch":{"xref_id":"0025152"}}}


id: PBO:0058231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4520-2","termid":"PBO:0058231"}


id: FYPO:0006600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased during metaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during mitotic metaphase","termid":"FYPO:0003002"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin during mitotic metaphase","synonyms":[{"name":"decreased protein localisation to centromeric chromatin during mitotic metaphase","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during metaphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during metaphase of mitotic cell cycle","type":"related"},{"name":"reduced protein localization to centromeric chromatin during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006600"}


id: MONDO:0017252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary airway malformation","termid":"MONDO:0016580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation type 4","secondary_identifiers":["icd11.foundation:1737719514","Orphanet:280854","UMLS:C5437760","GARD:21097","MEDGEN:1777484"],"synonyms":[{"name":"CPAM type 4","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung type 4","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung type 4","type":"exact"}],"termid":"MONDO:0017252","xrefs":{"Monarch":{"xref_id":"0017252"}}}


id: PBO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose Insensitive Transcription","termid":"PBO:0001589"}


id: PBO:0090491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"up-frameshift suppressor 3 family protein","termid":"PBO:0090491"}


id: GO:0000256
data:
  {"annotated_genes":["SJAG_05287","SJAG_00035"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62189,75072],"is_not":false,"summary":null,"term":"GO:0000256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of allantoin, (2,5-dioxo-4-imidazolidinyl)urea.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allantoin metabolic process","termid":"GO:0000255"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantoin catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"allantoin breakdown","type":"exact"},{"name":"allantoin catabolism","type":"exact"},{"name":"allantoin degradation","type":"exact"}],"termid":"GO:0000256","terms_by_termid":{"GO:0000256":null}}


id: GO:0038096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An Fc-gamma receptor signaling pathway that contributes to the endocytic engulfment of external particulate material by phagocytes.","definition_xrefs":["GOC:phg","PMID:15466916","PMID:12488490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor mediated stimulatory signaling pathway","termid":"GO:0002431"},{"relation_name":"is_a","term_name":"immune response-regulating cell surface receptor signaling pathway involved in phagocytosis","termid":"GO:0002433"},{"relation_name":"is_a","term_name":"Fc-gamma receptor signaling pathway","termid":"GO:0038094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"Fc-gamma receptor signaling pathway involved in phagocytosis","secondary_identifiers":["Reactome:R-HSA-9664422","Reactome:R-HSA-2029480"],"synonyms":[{"name":"Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:0038096"}


id: PBO:0041949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chibby family member 1, beta catenin antagonist","termid":"PBO:0041949"}


id: PBO:0091575
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by mouse HUS1","termid":"PBO:0091575"}


id: PBO:0076118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 2","termid":"PBO:0076118"}


id: PBO:0091903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family, Knh3","termid":"PBO:0091903"}


id: PR:O42866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbonyl reductase family member 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01330","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.02","secondary_identifiers":["UniProtKB:O42866"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CBR4","type":"exact"}],"termid":"PR:O42866"}


id: MONDO:0003527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare genetic neoplastic disorder with an autosomal dominant pattern of inheritance characterized by multiple, recurrent skin cancers that spontaneously resolve. It has been described almost exclusively in families of Scottish origin. It is caused by a mutation in the tumor-suppressing gene, TGFBR1, on chromosome 9. Clinical presentation is usually rapidly growing squamous cell carcinomas or keratoacanthomas that primarily localize to sun-exposed areas. Appearance of the neoplasms occurs over several weeks before receding over the course of several months if untreated. The regression of the lesions leaves pitting cicatrices but no other known sequelae.","gene_count":0,"genotype_count":0,"name":"obsolete Ferguson-Smith tumor (obsolete MONDO:0003527)","termid":"MONDO:0003527","xrefs":{"Monarch":{"xref_id":"0003527"}}}


id: MONDO:0009693
data:
  {"annotated_genes":["SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87125],"is_not":false,"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A bone marrow-based plasma cell neoplasm characterized by a serum monoclonal protein and skeletal destruction with osteolytic lesions, pathological fractures, bone pain, hypercalcemia, and anemia. Clinical variants include non-secretory myeloma, smoldering myeloma, indolent myeloma, and plasma cell leukemia. (WHO, 2001)","definition_xrefs":["NCIT:C3242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"plasma cell neoplasm","termid":"MONDO:0004959"},{"relation_name":"is_a","term_name":"myeloid neoplasm","termid":"MONDO:0005170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"plasma cell myeloma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:526287100","icd11.foundation:1582389689","ONCOTREE:PCM","GARD:7108","MEDGEN:10122","MedDRA:10028228","EFO:0001378","ICD9:203.0","MESH:D009101","Orphanet:29073","UMLS:C0026764","NORD:1469","ICDO:9732/3","OMIM:254500","DOID:9538","ICD10CM:C90.0"],"synonyms":[{"name":"Al amyloidosis","type":"related"},{"name":"Kahler disease","type":"exact"},{"name":"Kahler's disease","type":"exact"},{"name":"Multiple Myeloma","type":"exact"},{"name":"amyloidosis, systemic","type":"related"},{"name":"medullary plasmacytoma","type":"exact"},{"name":"multiple myeloma","type":"exact"},{"name":"multiple myeloma, resistance to, Somatic mutation","type":"exact"},{"name":"multiple myeloma, susceptibility to, Somatic mutation","type":"exact"},{"name":"multiple myeloma/plasma cell myeloma","type":"exact"},{"name":"myeloid neoplasm of plasma cell","type":"exact"},{"name":"myeloma","type":"exact"},{"name":"myeloma - multiple","type":"related"},{"name":"myeloma, multiple","type":"exact"},{"name":"myeloma, plasma cell, malignant","type":"exact"},{"name":"myelomatosis","type":"exact"},{"name":"plasma cell myeloid neoplasm","type":"exact"},{"name":"plasma cell myeloma","type":"exact"}],"termid":"MONDO:0009693","terms_by_termid":{"MONDO:0009693":null},"xrefs":{"Monarch":{"xref_id":"0009693"}}}


id: GO:0051497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of actin filament bundle assembly","termid":"GO:0032232"},{"relation_name":"is_a","term_name":"regulation of stress fiber assembly","termid":"GO:0051492"},{"relation_name":"negatively_regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"negative regulation of stress fiber assembly","synonyms":[{"name":"down regulation of stress fiber formation","type":"related"},{"name":"down-regulation of stress fiber formation","type":"exact"},{"name":"downregulation of stress fiber formation","type":"related"},{"name":"inhibition of stress fiber formation","type":"narrow"},{"name":"negative regulation of stress fibre biosynthesis","type":"related"},{"name":"negative regulation of stress fibre formation","type":"related"}],"termid":"GO:0051497"}


id: SO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region in a genome which promotes recombination.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_hotspot","secondary_identifiers":["http://en.wikipedia.org/wiki/Recombination_hotspot"],"synonyms":[{"name":"recombination hotspot","type":"exact"}],"termid":"SO:0000339"}


id: PBO:0052552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLRC4-KLRK1 readthrough","termid":"PBO:0052552"}


id: PR:O14352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsm4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.06","synonyms":[{"name":"Spom972h-lsm4","type":"exact"}],"termid":"PR:O14352"}


id: PBO:0007947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate light chain Dli1/Dil1","termid":"PBO:0007947"}


id: MONDO:0010028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sialuria is an extremely rare metabolic disorder described in fewer than 10 patients to date and characterized by variable signs and symptoms, mostly in infancy, including transient failure to thrive, slightly prolonged neonatal jaundice, equivocal or mild hepatomegaly, microcytic anemia, frequent upper respiratory infections, gastroenteritis, dehydration and flat and coarse facies. Learning difficulties and seizures may occur in childhood.","definition_xrefs":["Orphanet:3166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of sialic acid metabolism","termid":"MONDO:0017736"},{"relation_name":"is_a","term_name":"free sialic acid storage disease","termid":"MONDO:0019366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"sialuria","secondary_identifiers":["UMLS:C0342853","SCTID:238051008","ICD9:796.4","GARD:4865","DOID:3659","MedDRA:10067529","MEDGEN:137980","icd11.foundation:154329034","OMIM:269921"],"synonyms":[{"name":"sialuria","type":"exact"},{"name":"sialuria, French type","type":"exact"}],"termid":"MONDO:0010028","xrefs":{"Monarch":{"xref_id":"0010028"}}}


id: MONDO:0100059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Long-lasting, unexplained and asymptomatic blood hypereosinophilia.","definition_xrefs":["PMID:24338273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"hypereosinophilia of undetermined significance","secondary_identifiers":["MEDGEN:1812275","UMLS:C5666804"],"synonyms":[{"name":"HEUS","type":"exact"},{"name":"benign eosinophilia","type":"exact"}],"termid":"MONDO:0100059","xrefs":{"Monarch":{"xref_id":"0100059"}}}


id: MONDO:0021537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A undifferentiated carcinoma that involves the nasopharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"},{"relation_name":"is_a","term_name":"nasopharyngeal carcinoma","termid":"MONDO:0015459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated carcinoma of nasopharynx","secondary_identifiers":["NCIT:C8023","icd11.foundation:584112926","MEDGEN:124650","SCTID:422541001","UMLS:C0279748"],"synonyms":[{"name":"lymphoepithelioma of nasopharynx","type":"exact"},{"name":"lymphoepithelioma of the nasopharynx","type":"exact"},{"name":"nasopharyngeal lymphoepithelioma","type":"exact"},{"name":"nasopharyngeal nonkeratinizing undifferentiated carcinoma","type":"exact"},{"name":"nasopharyngeal undifferentiated carcinoma","type":"exact"},{"name":"nasopharynx undifferentiated carcinoma","type":"exact"},{"name":"undifferentiated carcinoma of the nasopharynx","type":"exact"},{"name":"undifferentiated nasopharyngeal throat cancer","type":"exact"}],"termid":"MONDO:0021537","xrefs":{"Monarch":{"xref_id":"0021537"}}}


id: PBO:0054406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1802","termid":"PBO:0054406"}


id: GO:1904941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA nucleotidylexotransferase activity.","definition_xrefs":["GOC:bc","GOC:BHF_miRNA","PMID:23575307","GOC:BHF","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA nucleotidylexotransferase activity (obsolete GO:1904941)","synonyms":[{"name":"activation of DNA nucleotidylexotransferase activity","type":"narrow"},{"name":"activation of TdT","type":"related"},{"name":"activation of addase activity","type":"narrow"},{"name":"activation of deoxynucleotidyl terminal transferase activity","type":"narrow"},{"name":"activation of deoxyribonucleic acid nucleotidyltransferase activity","type":"narrow"},{"name":"activation of deoxyribonucleic nucleotidyltransferase activity","type":"narrow"},{"name":"activation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"narrow"},{"name":"activation of terminal addition enzyme activity","type":"related"},{"name":"activation of terminal deoxynucleotide transferase activity","type":"narrow"},{"name":"activation of terminal deoxynucleotidyltransferase activity","type":"narrow"},{"name":"activation of terminal deoxyribonucleotidyltransferase activity","type":"narrow"},{"name":"activation of terminal transferase activity","type":"narrow"},{"name":"positive regulation of TdT","type":"related"},{"name":"positive regulation of addase activity","type":"exact"},{"name":"positive regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"positive regulation of terminal addition enzyme activity","type":"related"},{"name":"positive regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"positive regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of terminal transferase activity","type":"exact"},{"name":"up regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of TdT","type":"related"},{"name":"up regulation of addase activity","type":"exact"},{"name":"up regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of terminal addition enzyme activity","type":"related"},{"name":"up regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"up regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"up regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"up regulation of terminal transferase activity","type":"exact"},{"name":"up-regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of TdT","type":"related"},{"name":"up-regulation of addase activity","type":"exact"},{"name":"up-regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of terminal addition enzyme activity","type":"related"},{"name":"up-regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"up-regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of terminal transferase activity","type":"exact"},{"name":"upregulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of TdT","type":"related"},{"name":"upregulation of addase activity","type":"exact"},{"name":"upregulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of terminal addition enzyme activity","type":"related"},{"name":"upregulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"upregulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"upregulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"upregulation of terminal transferase activity","type":"exact"}],"termid":"GO:1904941"}


id: GO:0071308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a menaquinone (vitamin K2) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to menaquinone","termid":"GO:0032572"},{"relation_name":"is_a","term_name":"cellular response to vitamin K","termid":"GO:0071307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to menaquinone","synonyms":[{"name":"cellular response to menatetrenone","type":"exact"},{"name":"cellular response to vitamin K2","type":"exact"}],"termid":"GO:0071308"}


id: GO:0015155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lactose from one side of a membrane to the other. Lactose is a disaccharide 4-O-beta-D-galactopyranosyl-D-glucose, and constitutes roughly 5% of the milk in almost all mammals.","definition_xrefs":["GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"lactose transmembrane transporter activity","secondary_identifiers":["GO:0019189"],"synonyms":[{"name":"lactose permease activity","type":"exact"},{"name":"lactose/glucose efflux transporter activity","type":"narrow"}],"termid":"GO:0015155"}


id: MONDO:0010375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked intellectual disability-epilepsy syndrome","termid":"MONDO:0016160"},{"relation_name":"is_a","term_name":"hereditary hyperekplexia","termid":"MONDO:0021022"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"},{"relation_name":"is_a","term_name":"X-linked complex neurodevelopmental disorder","termid":"MONDO:0100148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 8","secondary_identifiers":["DOID:0080215","OMIM:300607","Orphanet:163985","MEDGEN:375581","MESH:C564474","GARD:17010","UMLS:C1845102"],"synonyms":[{"name":"DEE8","type":"exact"},{"name":"EIEE8","type":"exact"},{"name":"developmental and epileptic encephalopathy 8","type":"exact"},{"name":"early infantile epileptic encephalopathy 8","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 8","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 8","type":"exact"},{"name":"hyperekplexia and epilepsy","type":"related"},{"name":"hyperekplexia-epilepsy syndrome","type":"exact"}],"termid":"MONDO:0010375","xrefs":{"Monarch":{"xref_id":"0010375"}}}


id: PBO:0056251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein 2","termid":"PBO:0056251"}


id: PBO:0041663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 8","termid":"PBO:0041663"}


id: PBO:0071346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 4","termid":"PBO:0071346"}


id: MONDO:0011878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Worth syndrome (obsolete MONDO:0011878)","termid":"MONDO:0011878","xrefs":{"Monarch":{"xref_id":"0011878"}}}


id: GO:0009694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving jasmonic acid, a fatty acid derivative with the formula (1R-(1 alpha, 2 beta(Z)))-3-oxo-2-(2-pentenyl)cyclopentaneacetic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"jasmonic acid metabolic process","synonyms":[{"name":"jasmonic acid metabolism","type":"exact"}],"termid":"GO:0009694"}


id: PBO:0040285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit beta 1","termid":"PBO:0040285"}


id: PBO:0062864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 1","termid":"PBO:0062864"}


id: GO:1901698
data:
  {"annotated_genes":["SJAG_00790","SJAG_01854","SJAG_04583","SJAG_03345","SJAG_01528","SJAG_02539","SJAG_01626","SJAG_01051","SJAG_01858","SJAG_03227","SJAG_04612","SJAG_04384","SJAG_05022","SJAG_03288","SJAG_00126","SJAG_01768","SJAG_01585","SJAG_00403","SJAG_00131","SJAG_02685","SJAG_00681","SJAG_07000","SJAG_04429","SJAG_02244","SJAG_05274","SJAG_00948","SJAG_00530","SJAG_00766","SJAG_02694","SJAG_00931","SJAG_03032","SJAG_03153","SJAG_01134","SJAG_01656","SJAG_03841","SJAG_04345","SJAG_04063","SJAG_00941","SJAG_01709","SJAG_00627","SJAG_01584","SJAG_04904","SJAG_02774","SJAG_03657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102016,87195],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070458"},{"annotations":[78481,94779,76064,94512,70822,111772,74656,116950,100571,71983,78296,78524,70499,102720,71011,104616,70440,98021,115650,70413,97637,78543,79261,91197,107904,73108,78324,116385,107469,74163,87583,104532,93370,107968,89334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036503"},{"annotations":[72961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[77372,77869],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904293"},{"annotations":[75323,78846],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030970"},{"annotations":[93347,95500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen compound stimulus.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00131":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00627":null,"SJAG_00681":null,"SJAG_00766":null,"SJAG_00790":null,"SJAG_00931":null,"SJAG_00941":null,"SJAG_00948":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01528":null,"SJAG_01584":null,"SJAG_01585":null,"SJAG_01626":null,"SJAG_01656":null,"SJAG_01709":null,"SJAG_01768":null,"SJAG_01854":null,"SJAG_01858":null,"SJAG_02244":null,"SJAG_02539":null,"SJAG_02685":null,"SJAG_02694":null,"SJAG_02774":null,"SJAG_03032":null,"SJAG_03153":null,"SJAG_03227":null,"SJAG_03288":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03841":null,"SJAG_04063":null,"SJAG_04345":null,"SJAG_04384":null,"SJAG_04429":null,"SJAG_04583":null,"SJAG_04612":null,"SJAG_04904":null,"SJAG_05022":null,"SJAG_05274":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrogen compound","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"response to nitrogen molecular entity","type":"exact"}],"termid":"GO:1901698","terms_by_termid":{"GO:0030970":null,"GO:0031990":null,"GO:0036503":null,"GO:0070458":null,"GO:0097466":null,"GO:1904293":null}}


id: GO:0051556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leucoanthocyanidins, a class of colorless intermediates in the biosynthetic pathway of the pigmented flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"leucoanthocyanidin metabolic process","secondary_identifiers":["MetaCyc:PWY1F-823"],"synonyms":[{"name":"leucoanthocyanidin metabolism","type":"exact"}],"termid":"GO:0051556"}


id: PBO:0086652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole, while HA-tagged protein is found in the soluble fraction, suggesting cytoplasmic localization","termid":"PBO:0086652"}


id: MONDO:0043839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lesion on the surface of the skin or a mucous surface, produced by the sloughing of inflammatory necrotic tissue.","definition_xrefs":["MESH:D014456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulcer disease","secondary_identifiers":["MEDGEN:22541","UMLS:C0041582","NCIT:C3426","SCTID:429040005"],"synonyms":[{"name":"ulcer","type":"exact"},{"name":"ulcers","type":"exact"}],"termid":"MONDO:0043839","xrefs":{"Monarch":{"xref_id":"0043839"}}}


id: MONDO:0012975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the GJB6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 3B","secondary_identifiers":["UMLS:C2675237","OMIM:612643","DOID:0110565","MESH:C567215","GARD:18130","MEDGEN:436382"],"synonyms":[{"name":"DFNA3B","type":"narrow"},{"name":"GJB6 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 3B","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 3B","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in GJB6","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 3B","type":"narrow"},{"name":"deafness, autosomal dominant 3B","type":"narrow"},{"name":"deafness, autosomal dominant 3b","type":"narrow"},{"name":"deafness, autosomal dominant type 3B","type":"narrow"}],"termid":"MONDO:0012975","xrefs":{"Monarch":{"xref_id":"0012975"}}}


id: PBO:0078959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-2","termid":"PBO:0078959"}


id: PBO:0045792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER degradation enhancing alpha-mannosidase like protein 2","termid":"PBO:0045792"}


id: PBO:0031119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_HMG-CoA_reductase_activity","termid":"PBO:0031119"}


id: PBO:0061577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrimin","termid":"PBO:0061577"}


id: PBO:0091010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi transport protein Yos1","termid":"PBO:0091010"}


id: PATO:0000947
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's being oval with two axes of symmetry, as produced by a conical section.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elliptic","synonyms":[{"name":"ellipse-shaped","type":"exact"},{"name":"ellipsoid","type":"exact"},{"name":"elliptical","type":"exact"},{"name":"oval","type":"related"},{"name":"ovoid","type":"related"}],"termid":"PATO:0000947"}


id: PBO:0088952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2406 family conserved fungal protein","termid":"PBO:0088952"}


id: GO:0047333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dihydrostreptomycin 6-phosphate = ADP + dihydrostreptomycin 3'alpha,6-bisphosphate + 2 H+.","definition_xrefs":["EC:2.7.1.88","RHEA:16281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"dihydrostreptomycin-6-phosphate 3'-alpha-kinase activity","secondary_identifiers":["MetaCyc:2.7.1.88-RXN","KEGG_REACTION:R03395"],"synonyms":[{"name":"ATP:dihydrostreptomycin-6-P 3'alpha-phosphotransferase activity","type":"related"},{"name":"ATP:dihydrostreptomycin-6-phosphate 3'alpha-phosphotransferase activity","type":"related"},{"name":"dihydrostreptomycin 6-phosphate kinase (phosphorylating)","type":"related"},{"name":"dihydrostreptomycin-6-phosphate 3'alpha-kinase activity","type":"related"}],"termid":"GO:0047333"}


id: GO:0141006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transposable element silencing mechanism in which a Piwi-associated RNA (piRNA) triggers heterochromatin assembly. Heterochromatin is a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:32381626","PMID:32674113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA-mediated heterochromatin formation","termid":"GO:0140966"},{"relation_name":"is_a","term_name":"transposable element silencing by heterochromatin formation","termid":"GO:0141005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"transposable element silencing by piRNA-mediated heterochromatin formation","secondary_identifiers":["Reactome:R-HSA-9845323"],"synonyms":[{"name":"piRNA-mediated retrotransposon silencing by heterochromatin formation","type":"narrow"}],"termid":"GO:0141006"}


id: PBO:0085191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORF with sequence and positional similarity to the MAL64 gene; the MAL64 gene is thought to be a nonfunctional copy of MAL63; encoded within the complex locus MAL3 in some strains of S. cerevisiae, but not in S288C","termid":"PBO:0085191"}


id: PBO:0077056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 1 pseudogene 1","termid":"PBO:0077056"}


id: MONDO:0010955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal dysplasia with intellectual disability and syndactyly","secondary_identifiers":["MEDGEN:322135","OMIM:600906","MESH:C538018","UMLS:C1833169"],"synonyms":[{"name":"ectodermal dysplasia intellectual disability syndactyly","type":"related"},{"name":"ectodermal dysplasia mental retardation syndactyly","type":"related"},{"name":"ectodermal dysplasia with intellectual disability and syndactyly","type":"exact"},{"name":"ectodermal dysplasia with mental retardation and syndactyly","type":"exact"}],"termid":"MONDO:0010955","xrefs":{"Monarch":{"xref_id":"0010955"}}}


id: MONDO:0013109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, acute lymphocytic, susceptibility to, 2","secondary_identifiers":["UMLS:C2751593","MEDGEN:442766","OMIM:613067"],"synonyms":[{"name":"ALL2","type":"related"},{"name":"leukemia, acute lymphoblastic, susceptibility to, 2","type":"related"},{"name":"leukemia, acute lymphocytic, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0013109","xrefs":{"Monarch":{"xref_id":"0013109"}}}


id: GO:0004925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prolactin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prolactin receptor activity","termid":"GO:0004925"}


id: PBO:0005048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght6","termid":"PBO:0005048"}


id: PBO:0088177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zeta subunit of the coatomer complex (COPI); COPI coats Golgi-derived transport vesicles; involved in retrograde transport between Golgi and ER","termid":"PBO:0088177"}


id: MONDO:0006973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the sebaceous glands, sweat glands, or the hair follicles. Representative examples include sebaceous carcinoma, apocrine carcinoma, eccrine carcinoma, and pilomatrical carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal appendage tumor","termid":"MONDO:0002297"},{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin appendage carcinoma","secondary_identifiers":["ICDO:8390/3","MESH:D018280","EFO:1001183","MEDGEN:60209","NCIT:C3775","MedDRA:10040798","ONCOTREE:SKAC","UMLS:C0206697"],"synonyms":[{"name":"adnexal carcinoma","type":"exact"},{"name":"carcinoma of adnexa","type":"exact"},{"name":"carcinoma of cutaneous appendage","type":"exact"},{"name":"carcinoma of skin appendage","type":"exact"},{"name":"carcinoma, adnexal, malignant","type":"exact"},{"name":"cutaneous appendage carcinoma","type":"exact"},{"name":"skin adnexal carcinoma","type":"related"},{"name":"skin appendage carcinoma","type":"exact"}],"termid":"MONDO:0006973","xrefs":{"Monarch":{"xref_id":"0006973"}}}


id: PBO:0055359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2788","termid":"PBO:0055359"}


id: PBO:0034398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_regulator_(obsolete_requires_regulator)","termid":"PBO:0034398"}


id: MONDO:0007551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal subtype of epidermolysis bullosa simplex (EBS). The disease is characterized by blisters occurring mainly on the palms and soles, exacerbated by warm weather.","definition_xrefs":["Orphanet:79400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 1C, localized","secondary_identifiers":["ICD9:757.39","GARD:2146","MEDGEN:87016","SCTID:294705005","UMLS:C0080333","OMIM:131800","DOID:0080510"],"synonyms":[{"name":"EBS, acral form","type":"related"},{"name":"EBS-loc","type":"exact"},{"name":"Weber-Cockayne syndrome","type":"related"},{"name":"Weber-Cockayne type epidermolysis bullosa simplex","type":"related"},{"name":"epidermolysis bullosa of hands and feet","type":"related"},{"name":"epidermolysis bullosa simplex 1C, localized","type":"exact"},{"name":"epidermolysis bullosa simplex of palms and soles","type":"exact"},{"name":"epidermolysis bullosa simplex, Weber-Cockayne type","type":"exact"},{"name":"epidermolysis bullosa simplex, localised","type":"related"},{"name":"epidermolysis bullosa simplex, localized","type":"related"},{"name":"localised epidermolysis bullosa simplex","type":"exact"},{"name":"localized epidermolysis bullosa simplex","type":"exact"}],"termid":"MONDO:0007551","xrefs":{"Monarch":{"xref_id":"0007551"}}}


id: PBO:0045314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-deoxynucleoside 5'-phosphate N-hydrolase 1","termid":"PBO:0045314"}


id: PBO:0063261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 7","termid":"PBO:0063261"}


id: GO:0010853
data:
  {"annotated_genes":["SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010856"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an enzyme that catalyzes a ring closure reaction.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"cyclase regulator activity","termid":"GO:0010851"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"cyclase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010853","terms_by_termid":{"GO:0010856":null}}


id: GO:0140630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 geranylgeranyl diphosphate -> all-trans-phytoene + 2 diphosphate.","definition_xrefs":["PMID:7896759","PMID:12641468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"all-trans-phytoene synthase activity","synonyms":[{"name":"phytoene synthase activity","type":"broad"}],"termid":"GO:0140630"}


id: MONDO:0042960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sackey-Sakati-Aur syndrome","secondary_identifiers":["MESH:C537219","UMLS:C2931442","MEDGEN:444056"],"synonyms":[{"name":"Aur syndrome","type":"related"},{"name":"Sackey Sakati Aur syndrome","type":"related"},{"name":"multiple dysmorphic features and pancytopenia","type":"related"},{"name":"pancytopenia multiple congenital anomalies","type":"related"}],"termid":"MONDO:0042960","xrefs":{"Monarch":{"xref_id":"0042960"}}}


id: PBO:0003208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication licensing factor Cdt1","termid":"PBO:0003208"}


id: PBO:0024825
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Arabidopsis thaliana AtSGP1","termid":"PBO:0024825"}


id: GO:0000716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The identification of lesions on the actively transcribed strand of the DNA duplex as well as a small subset of lesions not recognized by the general nucleotide-excision repair pathway.","definition_xrefs":["GOC:elh","PMID:10197977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair, DNA damage recognition","termid":"GO:0000715"},{"relation_name":"part_of","term_name":"transcription-coupled nucleotide-excision repair","termid":"GO:0006283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"transcription-coupled nucleotide-excision repair, DNA damage recognition","synonyms":[{"name":"pyrimidine-dimer repair, DNA damage recognition","type":"related"}],"termid":"GO:0000716"}


id: GO:0071649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of chemokine (C-C motif) ligand 5.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-C motif) ligand 5 production","termid":"GO:0071609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of chemokine (C-C motif) ligand 5 production","synonyms":[{"name":"regulation of CCL5 production","type":"exact"},{"name":"regulation of RANTES production","type":"exact"},{"name":"regulation of Regulated upon Activation, Normal T-cell Expressed, and Secreted production","type":"exact"}],"termid":"GO:0071649"}


id: GO:0002587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002581"},{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002584"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002586"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"down regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"down-regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"downregulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"inhibition of antigen processing and presentation of peptide antigen via MHC class II","type":"narrow"},{"name":"negative regulation of peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002587"}


id: PBO:0051943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine triphosphatase","termid":"PBO:0051943"}


id: PBO:0083302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 5' end of essential NBP1/YLR457C gene required for mitosis","termid":"PBO:0083302"}


id: PBO:0029768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_ionizing_radiation","termid":"PBO:0029768"}


id: PBO:0061107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family CARD domain containing 5","termid":"PBO:0061107"}


id: PBO:0040174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASNS pseudogene 5","termid":"PBO:0040174"}


id: GO:0140723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of patulin, an acetate-derived tetraketide mycotoxin produced by several fungal species that shows antimicrobial properties against several bacteria.","definition_xrefs":["PMID:30680886","PMID:25120234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"patulin biosynthetic process","synonyms":[{"name":"patulin anabolism","type":"exact"},{"name":"patulin biosynthesis","type":"exact"},{"name":"patulin formation","type":"exact"},{"name":"patulin synthesis","type":"exact"}],"termid":"GO:0140723"}


id: PBO:0083055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diadenosine and diphosphoinositol polyphosphate phosphatase; hydrolyzes diphosphorylated inositol polyphosphates and diadenosine polyphosphates; high specificity for diadenosine hexa- and pentaphosphates; contains endopolyphosphatase activity with a high affinity for polyphosphates, an activity also observed for its human DIPP homologs; possesses mRNA decapping activity; nudix hydrolase family member; protein abundance increases in response to DNA replication stress","termid":"PBO:0083055"}


id: GO:0030882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipid antigen.","definition_xrefs":["PMID:14500461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen binding","termid":"GO:0003823"},{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"lipid antigen binding","termid":"GO:0030882"}


id: SO:1001255
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001255 status_of_coding_sequence (obsolete SO:1001255)","termid":"SO:1001255"}


id: GO:0052404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont protease activity, the catalysis of the hydrolysis of peptide bonds in a protein. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont peptidase activity (obsolete GO:0052404)","synonyms":[{"name":"down regulation by host of symbiont protease activity","type":"narrow"},{"name":"down-regulation by host of symbiont protease activity","type":"narrow"},{"name":"downregulation by host of symbiont protease activity","type":"narrow"},{"name":"inhibition by host of symbiont protease activity","type":"narrow"},{"name":"inhibition of symbiont protease activity","type":"narrow"},{"name":"negative regulation by host of symbiont protease activity","type":"narrow"}],"termid":"GO:0052404"}


id: PBO:0058886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10523","termid":"PBO:0058886"}


id: MONDO:0013158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive muscular dystrophy caused by mutations in the LARGE gene. It is associated with characteristic brain and eye malformations, profound mental retardation, and death usually in the first years of life.","definition_xrefs":["NCIT:C126743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A6","secondary_identifiers":["OMIM:613154","DOID:0111242","MEDGEN:461764","UMLS:C3150414","GARD:15626"],"synonyms":[{"name":"MDDGA6","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, large-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies) type A, 6","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 6","type":"related"}],"termid":"MONDO:0013158","xrefs":{"Monarch":{"xref_id":"0013158"}}}


id: GO:0006929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another along a substrate such as the extracellular matrix; the migrating cell forms a protrusion that attaches to the substrate.","definition_xrefs":["PMID:14657486","PMID:11944043","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cell migration","synonyms":[{"name":"substrate-bound cell migration","type":"exact"}],"termid":"GO:0006929"}


id: GO:0030998
data:
  {"annotated_genes":["SJAG_00172","SJAG_04303","SJAG_03843","SJAG_03438","SJAG_04748","SJAG_02490","SJAG_02652","SJAG_05333","SJAG_07002"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88845,90124,91263,94539,104676,109345,109438,110916,115327],"is_not":false,"summary":null,"term":"GO:0030998"}]},"cv_name":"cellular_component","definition":"A proteinaceous scaffold associated with fission yeast chromosomes during meiotic prophase. Linear elements consist of a protein complex, LinE, with four main structural components (Rec10, Rec25, Rec27, and Mug20 in S. pombe) associated with chromatin. The resulting structure is related to but not equivalent to the synaptonemal complex.","definition_xrefs":["GOC:jb","PMID:12665553","DOI:10.2323/jgam.28.263","PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptonemal structure","termid":"GO:0099086"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00172":null,"SJAG_02490":null,"SJAG_02652":null,"SJAG_03438":null,"SJAG_03843":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_05333":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"linear element","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030998","terms_by_termid":{"GO:0030998":null}}


id: MONDO:0000581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lambda 5 deficiency (obsolete MONDO:0000581)","termid":"MONDO:0000581","xrefs":{"Monarch":{"xref_id":"0000581"}}}


id: PBO:0075249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 1, Y-linked","termid":"PBO:0075249"}


id: GO:0043763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of UTP:glucose-1-phosphate uridylyltransferase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"UTP:glucose-1-phosphate uridylyltransferase regulator activity","synonyms":[{"name":"UDP-glucose diphosphorylase regulator activity","type":"exact"},{"name":"UDP-glucose pyrophosphorylase regulator activity","type":"exact"},{"name":"glucose-1-phosphate uridylyltransferase regulator activity","type":"exact"}],"termid":"GO:0043763"}


id: MOD:01001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a 2-aminoisobutyric acid.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unnatural residue","termid":"MOD:00850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoisobutyric acid residue (Aib)","synonyms":[{"name":"2-amino-2-methylpropanoic acid","type":"exact"},{"name":"2-amino-2-methylpropionic acid","type":"exact"},{"name":"2-methylalanine","type":"exact"},{"name":"Aib","type":"exact"},{"name":"alpha,alpha-dimethylglycine","type":"exact"},{"name":"alpha-aminoisobutyric acid","type":"exact"},{"name":"alpha-methylalanine","type":"exact"}],"termid":"MOD:01001"}


id: PBO:0031613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_transport","termid":"PBO:0031613"}


id: GO:1905266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of blasticidin S.","definition_xrefs":["GOC:pr","GO_REF:0000068","GOC:TermGenie","Wikipedia:Blasticidin_S","PMID:23874663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside biosynthetic process","termid":"GO:0046134"},{"relation_name":"is_a","term_name":"blasticidin S metabolic process","termid":"GO:1905264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"blasticidin S biosynthetic process","synonyms":[{"name":"blasticidin S anabolism","type":"exact"},{"name":"blasticidin S biosynthesis","type":"exact"},{"name":"blasticidin S formation","type":"exact"},{"name":"blasticidin S synthesis","type":"exact"}],"termid":"GO:1905266"}


id: PBO:0088268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic histidine-tRNA ligase Hrs1","termid":"PBO:0088268"}


id: PBO:0090134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4196 and DUF4211, human CCDC82 ortholog","termid":"PBO:0090134"}


id: MONDO:0032736
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86911],"is_not":false,"summary":null,"term":"MONDO:0032736"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"is_obsolete":false,"name":"metabolic crises, recurrent, with variable encephalomyopathic features and neurologic regression","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1681269","OMIM:618416","UMLS:C5193083"],"synonyms":[{"name":"MECREN","type":"related"},{"name":"METABOLIC CRISES, RECURRENT, WITH VARIABLE ENCEPHALOMYOPATHIC FEATURES AND NEUROLOGIC REGRESSION","type":"related"}],"termid":"MONDO:0032736","terms_by_termid":{"MONDO:0032736":null},"xrefs":{"Monarch":{"xref_id":"0032736"}}}


id: PBO:0089352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi 4,6-pyruvylated galactose (PvGal) residue biosynthesis protein Pvg5","termid":"PBO:0089352"}


id: PBO:0091493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA Meu16","termid":"PBO:0091493"}


id: PBO:0069198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 452, pseudogene","termid":"PBO:0069198"}


id: GO:0034672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the pronephros along the anterior/posterior axis to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in pronephros development","termid":"GO:0039017"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification involved in pronephros development","synonyms":[{"name":"anterior/posterior pattern specification involved in pronephric kidney development","type":"exact"}],"termid":"GO:0034672"}


id: PBO:0058011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3937","termid":"PBO:0058011"}


id: GO:0090606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which microorganisms produce an extracellular matrix and form multicellular aggregates at an air-liquid interface.","definition_xrefs":["GOC:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-species biofilm formation","termid":"GO:0044010"},{"relation_name":"is_a","term_name":"surface biofilm formation","termid":"GO:0090604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species surface biofilm formation","secondary_identifiers":["GO:0032022"],"synonyms":[{"name":"multicellular pellicle formation","type":"related"}],"termid":"GO:0090606"}


id: GO:0030618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A TGF-beta cytoplasmic mediator that is phosphorylated by a TGFbeta receptor and complexes with a common-partner mediator. The- heterocomplex translocates to the nucleus to regulate transcription.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity (obsolete GO:0030618)","synonyms":[{"name":"TGF-beta receptor, pathway-specific cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, pathway-specific cytoplasmic mediator activity","type":"exact"},{"name":"pathway restricted SMAD protein","type":"related"},{"name":"pathway-restricted SMAD protein","type":"related"},{"name":"pathway-specific SMAD protein","type":"related"},{"name":"receptor regulated SMAD protein","type":"related"},{"name":"receptor-regulated SMAD protein","type":"related"}],"termid":"GO:0030618"}


id: MONDO:0002978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that arises in the orbit. It is characterized by the presence of round cells with myoblastic differentiation and a fibrovascular stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orbit rhabdomyosarcoma","termid":"MONDO:0002580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"orbit alveolar rhabdomyosarcoma","secondary_identifiers":["DOID:4384","MEDGEN:235408","UMLS:C1335126","NCIT:C6247"],"synonyms":[{"name":"alveolar rhabdomyosarcoma of orbit","type":"exact"},{"name":"alveolar rhabdomyosarcoma of the orbit","type":"exact"}],"termid":"MONDO:0002978","xrefs":{"Monarch":{"xref_id":"0002978"}}}


id: PBO:0061293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal PAS domain protein 4","termid":"PBO:0061293"}


id: MONDO:0006270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-invasive adenocarcinoma of the breast characterized by a proliferation of monomorphic cells completely filling the lumina. The overall lobular architecture is preserved. It is frequently multifocal (90% in some series) and bilateral. It seldom becomes invasive; however there is an increased risk of infiltrating ductal adenocarcinoma.","definition_xrefs":["NCIT:C4018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lobular neoplasia","termid":"MONDO:0002486"},{"relation_name":"is_a","term_name":"adenocarcinoma in situ","termid":"MONDO:0003218"},{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lobular breast carcinoma in situ","secondary_identifiers":["MEDGEN:79007","UMLS:C0279563","EFO:1000326","ICDO:8520/2","ONCOTREE:LCIS","SCTID:109888004"],"synonyms":[{"name":"LCIS","type":"exact"},{"name":"breast lobular carcinoma in situ","type":"related"},{"name":"lobular Ca in situ of breast","type":"exact"},{"name":"lobular Ca in situ of the breast","type":"exact"},{"name":"lobular breast carcinoma in situ","type":"exact"},{"name":"lobular carcinoma in situ","type":"exact"},{"name":"lobular carcinoma in situ (LCIS)","type":"exact"},{"name":"lobular carcinoma in situ of breast","type":"exact"},{"name":"lobular carcinoma in situ of the breast","type":"exact"},{"name":"lobular carcinoma in situ of the breast (LCIS)","type":"exact"},{"name":"non-infiltrating lobular breast carcinoma","type":"exact"},{"name":"non-infiltrating lobular carcinoma","type":"exact"},{"name":"non-infiltrating lobular carcinoma of breast","type":"exact"},{"name":"non-infiltrating lobular carcinoma of the breast","type":"exact"},{"name":"non-invasive lobular breast carcinoma","type":"exact"},{"name":"non-invasive lobular carcinoma of breast","type":"exact"},{"name":"non-invasive lobular carcinoma of the breast","type":"exact"}],"termid":"MONDO:0006270","xrefs":{"Monarch":{"xref_id":"0006270"}}}


id: PBO:0026939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiosis_I","termid":"PBO:0026939"}


id: PBO:0109653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammatory MKL1 (MRTFA) interacting lncRNA","termid":"PBO:0109653"}


id: MONDO:0000179
data:
  {"annotated_genes":["SJAG_02791","SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[86676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"}]},"cv_name":"mondo","definition":"Neu-Laxova syndrome (NLS) is a rare, multiple malformation syndrome characterized by severe intrauterine growth retardation (IUGR), severe microcephaly with a sloping forehead, severe ichthyosis (collodion baby type), and facial dysmorphism.","definition_xrefs":["Orphanet:2671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lissencephaly type 3","termid":"MONDO:0015148"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"3-phosphoglycerate dehydrogenase deficiency","termid":"MONDO:0018491"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"Neu-Laxova syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C14089","SCTID:77817004","GARD:102","UMLS:C0265218","ICD9:759.89","MESH:C536405","icd11.foundation:893358230","MEDGEN:78537","OMIMPS:256520"],"synonyms":[{"name":"NLS","type":"related"},{"name":"Neu Laxova syndrome","type":"related"},{"name":"nuclear localization signal","type":"exact"}],"termid":"MONDO:0000179","terms_by_termid":{"MONDO:0009736":null,"MONDO:0014466":null},"xrefs":{"Monarch":{"xref_id":"0000179"}}}


id: PBO:0090255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L27","termid":"PBO:0090255"}


id: GO:0043697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a specialized cell loses the structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these cells can revert back to the features of the stem cells that were their ancestors.","definition_xrefs":["GOC:pg","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dedifferentiation","termid":"GO:0043696"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell dedifferentiation","termid":"GO:0043697"}


id: PBO:0035696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of,_positive_effect","termid":"PBO:0035696"}


id: PBO:0075032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-43","termid":"PBO:0075032"}


id: PBO:0078506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tribbles pseudokinase 3","termid":"PBO:0078506"}


id: PBO:0040583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRISC and BRCA1 A complex member 2","termid":"PBO:0040583"}


id: PBO:0014303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMR domain protein, possibly involved in DNA repair and neddylation","termid":"PBO:0014303"}


id: PBO:0039587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 5","termid":"PBO:0039587"}


id: GO:0102354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11-cis-retinol + NADP = 11-cis-retinal + NADPH + H+.","definition_xrefs":["GOC:pz","RHEA:54912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"11-cis-retinol dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-13363"],"termid":"GO:0102354"}


id: MONDO:0009321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hallux varus-preaxial polysyndactyly syndrome is a rare, genetic, congenital limb malformation disorder characterized by bilateral medial displacement of the hallux and preaxial polysyndactyly of the first toes. Radiographs show broad, shortened, misshapen first metatarsals and may associate incomplete or complete duplication of proximal phalanges and duplication or triplication of distal phalanges. There have been no further descriptions in the literature since 1980.","definition_xrefs":["Orphanet:2110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hallux varus-preaxial polysyndactyly syndrome","secondary_identifiers":["MEDGEN:341088","GARD:3118","MESH:C536885","UMLS:C1856197","OMIM:234280"],"synonyms":[{"name":"Kleiner Holmes syndrome","type":"related"},{"name":"Kleiner-Holmes syndrome","type":"exact"},{"name":"hallux varus and preaxial polysyndactyly","type":"related"}],"termid":"MONDO:0009321","xrefs":{"Monarch":{"xref_id":"0009321"}}}


id: PBO:0080353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 7 pseudogene","termid":"PBO:0080353"}


id: PBO:0063799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain interacting protein","termid":"PBO:0063799"}


id: PR:O74972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4B4.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein fyv4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.11","synonyms":[{"name":"Spom972h-SPBC4B4.11","type":"exact"}],"termid":"PR:O74972"}


id: PBO:0084523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the ChAPs family (Chs5p-Arf1p-binding proteins); members include Bch1p, Bch2p, Bud7p, and Chs6p; ChAPs family proteins form the exomer complex with Chs5p to mediate export of specific cargo proteins from the Golgi to the plasma membrane; interacts selectively with the activated, GTP-bound form of Arf1p; may interact with ribosomes; protein abundance increases and forms cytoplasmic foci in response to DNA replication stress","termid":"PBO:0084523"}


id: MONDO:0013138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vertigo","termid":"MONDO:0004900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertigo, benign recurrent, 2","secondary_identifiers":["MESH:C567749","MEDGEN:442695","OMIM:613106","UMLS:C2751289"],"synonyms":[{"name":"BRV2","type":"exact"},{"name":"vertigo, benign recurrent, 2","type":"exact"}],"termid":"MONDO:0013138","xrefs":{"Monarch":{"xref_id":"0013138"}}}


id: GO:0001694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of histamine, a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans.","definition_xrefs":["ISBN:0395825172","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine metabolic process","termid":"GO:0001692"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"histamine biosynthetic process","secondary_identifiers":["GO:0001693"],"synonyms":[{"name":"histamine anabolism","type":"exact"},{"name":"histamine biosynthesis","type":"exact"},{"name":"histamine formation","type":"exact"},{"name":"histamine synthesis","type":"exact"}],"termid":"GO:0001694"}


id: GO:0071699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the olfactory placode are generated and organized. The olfactory placode is a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"ectodermal placode morphogenesis","termid":"GO:0071697"},{"relation_name":"part_of","term_name":"olfactory placode development","termid":"GO:0071698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory placode morphogenesis","termid":"GO:0071699"}


id: PBO:0074789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 10","termid":"PBO:0074789"}


id: PBO:0038590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase family member 9","termid":"PBO:0038590"}


id: GO:0160165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of CD8-positive alpha-beta T cells such that the total number of CD8-positive alpha-beta T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:30650357","PMID:33815406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell homeostasis","termid":"GO:0043029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta T cell homeostasis","synonyms":[{"name":"CD8+ T cell homeostasis","type":"broad"},{"name":"CD8-positive T cell homeostasis","type":"broad"}],"termid":"GO:0160165"}


id: MONDO:0005874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schistosomiasis of the brain, spinal cord, or meninges caused by infections with trematodes of the genus schistosoma (primarily schistosoma japonicum; schistosoma mansoni; and schistosoma haematobium in humans). S. japonicum infections of the nervous system may cause an acute meningoencephalitis or a chronic encephalopathy. S. mansoni and S. haematobium nervous system infections are associated with acute transverse myelitis involving the lower portions of the spinal cord. (From Joynt, Clinical Neurology, 1998, Ch27, pp61-2)","definition_xrefs":["MESH:D020818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schistosomiasis","termid":"MONDO:0015254"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroschistosomiasis","secondary_identifiers":["icd11.foundation:446216876","DOID:13722","EFO:0007394","MEDGEN:155718","UMLS:C0752191"],"termid":"MONDO:0005874","xrefs":{"Monarch":{"xref_id":"0005874"}}}


id: GO:0045844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of striated muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle tissue development","termid":"GO:0016202"},{"relation_name":"is_a","term_name":"positive regulation of muscle organ development","termid":"GO:0048636"},{"relation_name":"is_a","term_name":"positive regulation of muscle tissue development","termid":"GO:1901863"},{"relation_name":"positively_regulates","term_name":"striated muscle tissue development","termid":"GO:0014706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of striated muscle tissue development","synonyms":[{"name":"activation of striated muscle development","type":"narrow"},{"name":"stimulation of striated muscle development","type":"narrow"},{"name":"up regulation of striated muscle development","type":"exact"},{"name":"up-regulation of striated muscle development","type":"exact"},{"name":"upregulation of striated muscle development","type":"exact"}],"termid":"GO:0045844"}


id: GO:1905363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endosomal vesicle fusion.","definition_xrefs":["GOC:bc","GOC:PARL","GO_REF:0000058","GOC:TermGenie","PMID:26911690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of endosomal vesicle fusion","termid":"GO:1905364"},{"relation_name":"positively_regulates","term_name":"endosomal vesicle fusion","termid":"GO:0034058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"positive regulation of endosomal vesicle fusion","synonyms":[{"name":"activation of endosomal vesicle fusion","type":"narrow"},{"name":"activation of endosome vesicle fusion","type":"narrow"},{"name":"positive regulation of endosome vesicle fusion","type":"exact"},{"name":"up regulation of endosomal vesicle fusion","type":"exact"},{"name":"up regulation of endosome vesicle fusion","type":"exact"},{"name":"up-regulation of endosomal vesicle fusion","type":"exact"},{"name":"up-regulation of endosome vesicle fusion","type":"exact"},{"name":"upregulation of endosomal vesicle fusion","type":"exact"},{"name":"upregulation of endosome vesicle fusion","type":"exact"}],"termid":"GO:1905363"}


id: MONDO:0019968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Osgood-Schlatter disease (obsolete MONDO:0019968)","termid":"MONDO:0019968","xrefs":{"Monarch":{"xref_id":"0019968"}}}


id: GO:1905951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA recombination that takes place in mitochondrion.","definition_xrefs":["GOC:TermGenie","PMID:8087883","GO_REF:0000062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"},{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"mitochondrion DNA recombination","synonyms":[{"name":"DNA recombination in mitochondria","type":"exact"}],"termid":"GO:1905951"}


id: PBO:0070481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 16","termid":"PBO:0070481"}


id: GO:0008238
data:
  {"annotated_genes":["SJAG_00451","SJAG_01868","SJAG_00975","SJAG_00969","SJAG_02565","SJAG_03009","SJAG_01542","SJAG_01481","SJAG_02117","SJAG_04819","SJAG_04103","SJAG_02033","SJAG_01896","SJAG_06636","SJAG_03022","SJAG_03586","SJAG_03744","SJAG_00181","SJAG_01088","SJAG_04858","SJAG_04928"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004180"},{"annotations":[74356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016807"},{"annotations":[70043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008239"},{"annotations":[63549,62171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004239"},{"annotations":[63548,57774,97641,64254,74100,114244,72498,60080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070006"},{"annotations":[57984,74067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004181"},{"annotations":[60262,61090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070573"},{"annotations":[67640,68912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008235"},{"annotations":[75155,79227,76204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[73841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain, in a reaction that requires a free N-terminal amino group, C-terminal carboxyl group or both.","direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00451":null,"SJAG_00969":null,"SJAG_00975":null,"SJAG_01088":null,"SJAG_01481":null,"SJAG_01542":null,"SJAG_01868":null,"SJAG_01896":null,"SJAG_02033":null,"SJAG_02117":null,"SJAG_02565":null,"SJAG_03009":null,"SJAG_03022":null,"SJAG_03586":null,"SJAG_03744":null,"SJAG_04103":null,"SJAG_04819":null,"SJAG_04858":null,"SJAG_04928":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0140096","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"exopeptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"exoprotease activity","type":"narrow"}],"termid":"GO:0008238","terms_by_termid":{"GO:0004180":null,"GO:0004181":null,"GO:0004185":null,"GO:0004239":null,"GO:0008235":null,"GO:0008239":null,"GO:0008240":null,"GO:0016807":null,"GO:0070006":null,"GO:0070573":null}}


id: PR:O14009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.06c gene.","definition_xrefs":["UniProtKB:O14009","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear speckle splicing regulatory protein 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.06c","synonyms":[{"name":"Spom972h-SPAC29A4.06c","type":"exact"},{"name":"coiled-coil domain-containing protein 55 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14009"}


id: PBO:0034097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_preventative_for_condition","termid":"PBO:0034097"}


id: MONDO:0021932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trypanosomiasis caused by infection by Trypanosoma brucei gambiense.","definition_xrefs":["NCIT:C35084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human African trypanosomiasis","termid":"MONDO:0005459"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"},{"relation_name":"is_a","term_name":"parasitic skin disorder","termid":"MONDO:0024610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"infection by Trypanosoma gambiense","secondary_identifiers":["ICD9:086.3","UMLS:C0041232","SCTID:75809006","MEDGEN:11933"],"synonyms":[{"name":"Gambian sleeping sickness","type":"related"},{"name":"Gambian trypanosomiasis","type":"related"},{"name":"Gambiense trypanosomiasis infection","type":"related"},{"name":"Infection by Trypanosoma gambiense","type":"exact"},{"name":"Infection caused by Trypanosoma gambiense","type":"related"},{"name":"chronic sleeping sickness","type":"related"}],"termid":"MONDO:0021932","xrefs":{"Monarch":{"xref_id":"0021932"}}}


id: PBO:0085749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; implicated in proteasome function; interacts with TORC1, Ure2 and Gdh2; overexpression leads to hypersensitivity to rapamycin and nuclear accumulation of Gln3; epitope-tagged protein localizes to the cytoplasm","termid":"PBO:0085749"}


id: GO:0015410
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108465],"is_not":false,"summary":null,"term":"GO:0015410"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Mn2+(out) = ADP + phosphate + Mn2+(in).","definition_xrefs":["RHEA:17365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type manganese transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:7.2.2.5","MetaCyc:3.6.3.35-RXN","Reactome:R-HSA-5692462"],"synonyms":[{"name":"ABC-type Mn(2+) transporter","type":"related"},{"name":"ATP-dependent manganese transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled manganese transmembrane transporter activity","type":"related"},{"name":"manganese ABC transporter","type":"narrow"},{"name":"manganese transmembrane transporter activity, phosphorylative mechanism","type":"related"},{"name":"manganese-transporting ATPase activity","type":"related"}],"termid":"GO:0015410","terms_by_termid":{"GO:0015410":null}}


id: PBO:0055696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LKAAEAR motif containing 1","termid":"PBO:0055696"}


id: SO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An epigenetically modified gene, rearranged at the DNA level.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"rearranged_at_DNA_level","termid":"SO:0000904"},{"relation_name":"is_a","term_name":"epigenetically_modified_gene","termid":"SO:0000898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_rearranged_at_DNA_level","synonyms":[{"name":"gene rearranged at DNA level","type":"exact"}],"termid":"SO:0000138"}


id: GO:0032267
data:
  {"annotated_genes":["SJAG_05249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65106],"is_not":false,"summary":null,"term":"GO:0032267"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + cytidine(34) in tRNA(Ile2) + L-lysine = AMP + diphosphate + H+ + lysidine(34) in tRNA(Ile2). This modification converts both the codon specificity of tRNA(Ile) from AUG to AUA and its amino acid specificity from methionine to isoleucine.","definition_xrefs":["PMID:14527414","RHEA:43744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0140098","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"tRNA(Ile)-lysidine synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:6.3.4.19"],"synonyms":[{"name":"tRNA(Ile)-2-lysyl-cytidine synthase activity","type":"exact"},{"name":"tRNA(Ile)-lysidine synthetase activity","type":"exact"}],"termid":"GO:0032267","terms_by_termid":{"GO:0032267":null}}


id: PBO:0064928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 regulatory subunit 2","termid":"PBO:0064928"}


id: PBO:0040417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c pseudogene 2","termid":"PBO:0040417"}


id: PBO:0076160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 pseudogene 4","termid":"PBO:0076160"}


id: MONDO:1012391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"necrotizing meningoencephalitis, non-human animal","termid":"MONDO:1011879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotizing meningoencephalitis, dog","secondary_identifiers":["OMIA:001470-9615"],"termid":"MONDO:1012391","xrefs":{"Monarch":{"xref_id":"1012391"}}}


id: PBO:0073853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member 3 pseudogene 3","termid":"PBO:0073853"}


id: PBO:0086497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pimeloyl-CoA synthetase involved in biotin biosynthesis; in S. cerevisiae strains YJM627 and A364a; highly degraded pseudogenic copy of BIO1/YAR070W-A, which is a paralog of YJR154W","termid":"PBO:0086497"}


id: GO:0140987
data:
  {"annotated_genes":["SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102650],"is_not":false,"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ATP from one side of a membrane to the other according to the reaction: ATP(out) + phosphate(in) = ATP(in) + phosphate(out).","definition_xrefs":["PMID:15123600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP transmembrane transporter activity","termid":"GO:0005347"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00612":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ATP:phosphate antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:65840"],"synonyms":[{"name":"ATP:inorganic phosphate antiporter activity","type":"exact"},{"name":"inorganic phosphate:ATP antiporter activity","type":"exact"}],"termid":"GO:0140987","terms_by_termid":{"GO:0140987":null}}


id: FYPO:0007448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the endoplasmic reticulum is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:32735772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"},{"relation_name":"is_a","term_name":"abnormal macroautophagy during nitrogen starvation","termid":"FYPO:0004670"},{"relation_name":"is_a","term_name":"abnormal reticulophagy","termid":"FYPO:0008083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000257","FYPO:0005447"],"is_obsolete":false,"name":"normal reticulophagy during nitrogen starvation","synonyms":[{"name":"normal ER autophagy during nitrogen starvation","type":"exact"},{"name":"normal ER degradation during nitrogen starvation","type":"related"},{"name":"normal ER-phagy during nitrogen starvation","type":"exact"},{"name":"normal endoplasmic reticulum autophagy during nitrogen starvation","type":"exact"},{"name":"normal reticulophagy during nitrogen depletion","type":"exact"},{"name":"normal reticulophagy during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0007448"}


id: FYPO:0008232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more microtubule bundles than normal during mitotic M-phase.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundles present in increased numbers","termid":"FYPO:0002401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0002399","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"microtubule bundles present in increased numbers during mitotic M phase","termid":"FYPO:0008232"}


id: GO:0015556
data:
  {"annotated_genes":["SJAG_00522","SJAG_01406","SJAG_00671","SJAG_02140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[67272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[101456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[88204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[101459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of C4-dicarboxylate from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"C4-dicarboxylate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0015556","terms_by_termid":{"GO:0015131":null,"GO:0015140":null,"GO:0015183":null,"GO:0015366":null,"GO:0097434":null}}


id: PBO:0070760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 16","termid":"PBO:0070760"}


id: GO:0009860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of pollen via tip extension of the intine wall.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell tip growth","termid":"GO:0009932"},{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"pollen tube development","termid":"GO:0048868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube growth","termid":"GO:0009860"}


id: PBO:0050696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 9 pseudogene 2","termid":"PBO:0050696"}


id: PBO:0046639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 20","termid":"PBO:0046639"}


id: PBO:0055059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2475","termid":"PBO:0055059"}


id: MONDO:0010746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thumbs, congenital Clasped","secondary_identifiers":["MEDGEN:98140","OMIM:314100","UMLS:C0431886"],"synonyms":[{"name":"Clasped thumbs, congenital","type":"related"},{"name":"adducted thumbs syndrome","type":"related"},{"name":"thumbs, congenital Clasped","type":"exact"}],"termid":"MONDO:0010746","xrefs":{"Monarch":{"xref_id":"0010746"}}}


id: GO:1990222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The ProVWX complex belongs to the family of ATP-binding cassette (ABC) transporter proteins complexes. It consists of a cytoplasmic ATPase subunit ProV, a transmembrane subunit ProW and a periplasmic binding protein ProX. It is capable of translocating a wide variety of solute (e.g. glycine betaine) across the plasma membrane and is activated under osmotic stress conditions.","definition_xrefs":["GOC:bhm","PMID:23249124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"ProVWX complex","synonyms":[{"name":"ATP-binding cassette (ABC) transporter complex ProVWX","type":"exact"}],"termid":"GO:1990222"}


id: GO:1990144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to hypoxia (lowered oxygen tension). Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level. The pathway ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","PMID:20436456","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"},{"relation_name":"part_of","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to hypoxia","termid":"GO:1990144"}


id: PBO:0040714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6B transcription repressor","termid":"PBO:0040714"}


id: MONDO:0000995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of genetic neurological disorders caused by mutations in genes involved in the sodium and calcium channels in nerve cells. It is characterized by episodes of muscle paralysis in which the affected muscles become flaccid and the deep tendon reflexes disappear. Between the episodes the affected muscles usually work normally.","definition_xrefs":["NCIT:C84709"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"muscle tissue disorder","termid":"MONDO:0003939"},{"relation_name":"is_a","term_name":"inborn metal metabolism disorder","termid":"MONDO:0004689"},{"relation_name":"is_a","term_name":"periodic paralysis","termid":"MONDO:0016122"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial periodic paralysis","secondary_identifiers":["SCTID:267607008","NANDO:1200502","MEDGEN:18291","UMLS:C0030443","Orphanet:371433","MESH:D010245","GARD:21613","DOID:1029"],"synonyms":[{"name":"familial periodic paralyses","type":"related"},{"name":"familial periodic paralysis","type":"exact"},{"name":"familial periodic paralyzes","type":"related"},{"name":"genetic periodic paralysis","type":"related"},{"name":"hereditary periodic paralysis (disease)","type":"exact"},{"name":"normokalemic periodic paralyses","type":"related"},{"name":"normokalemic periodic paralysis","type":"related"},{"name":"normokalemic periodic paralyzes","type":"related"},{"name":"paralysis, familial periodic","type":"related"},{"name":"paralysis, normokalemic periodic","type":"related"},{"name":"paralyzes, normokalemic periodic","type":"related"},{"name":"periodic paralysis, familial","type":"related"},{"name":"periodic paralysis, normokalemic","type":"related"},{"name":"periodic paralyzes, familial","type":"related"},{"name":"periodic paralyzes, normokalemic","type":"related"}],"termid":"MONDO:0000995","xrefs":{"Monarch":{"xref_id":"0000995"}}}


id: PBO:0084009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogenin glucosyltransferase; self-glucosylating initiator of glycogen synthesis, also glucosylates n-dodecyl-beta-D-maltoside; similar to mammalian glycogenin; GLG2 has a paralog, GLG1, that arose from the whole genome duplication","termid":"PBO:0084009"}


id: MONDO:0008465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patterson-Stevenson-Fontaine syndrome is a very rare variant of acrofacial dysostosis characterized by mandibulofacial dysostosis and limb anomalies.","definition_xrefs":["Orphanet:2439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Patterson-Stevenson-Fontaine syndrome","secondary_identifiers":["MEDGEN:1808766","GARD:4260","OMIM:183700","SCTID:724069009","UMLS:C5574964"],"synonyms":[{"name":"Patterson Stevenson Fontaine syndrome","type":"related"},{"name":"Patterson-Stevenson syndrome","type":"exact"},{"name":"Patterson-Stevenson-Fontaine syndrome","type":"exact"},{"name":"split foot deformity-mandibulofacial dysostosis syndrome","type":"exact"},{"name":"split-foot deformity with ectrodactyly and mandibulofacial dysostosis","type":"related"},{"name":"split-foot deformity with mandibulofacial dysostosis","type":"related"}],"termid":"MONDO:0008465","xrefs":{"Monarch":{"xref_id":"0008465"}}}


id: GO:0001080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to an increase in the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["GOC:txnOH","GOC:mah","PMID:19104072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0001079"},{"relation_name":"is_a","term_name":"nitrogen catabolite activation of transcription","termid":"GO:0090294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"nitrogen catabolite activation of transcription from RNA polymerase II promoter","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter by nitrogen catabolites","type":"exact"}],"termid":"GO:0001080"}


id: PBO:0067369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 470, pseudogene","termid":"PBO:0067369"}


id: PBO:0028407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_biotin_import","termid":"PBO:0028407"}


id: PBO:0056198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A8","termid":"PBO:0056198"}


id: MONDO:1011289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dacryocystitis that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dacryocystitis, non-human animal","termid":"MONDO:1010360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dacryocystitis, rabbit","secondary_identifiers":["OMIA:002610-9986"],"termid":"MONDO:1011289","xrefs":{"Monarch":{"xref_id":"1011289"}}}


id: PBO:0072543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 73","termid":"PBO:0072543"}


id: PR:Q9USP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongator complex protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12896:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.06c","secondary_identifiers":["UniProtKB:Q9USP1"],"synonyms":[{"name":"SPCC11E10.06c","type":"related"},{"name":"Spom972h-ELP4","type":"exact"}],"termid":"PR:Q9USP1"}


id: GO:0046947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"hydroxylysine metabolic process","termid":"GO:0046946"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"hydroxylysine biosynthetic process","synonyms":[{"name":"hydroxylysine anabolism","type":"exact"},{"name":"hydroxylysine biosynthesis","type":"exact"},{"name":"hydroxylysine formation","type":"exact"},{"name":"hydroxylysine synthesis","type":"exact"}],"termid":"GO:0046947"}


id: GO:0007355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Specification of the anterior (head and thoracic segments) of the embryo by the gap genes; exemplified in insects by the actions of hunchback gene product.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"zygotic determination of anterior/posterior axis, embryo","termid":"GO:0007354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior region determination","termid":"GO:0007355"}


id: GO:0042509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:jl","PMID:11426647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"},{"relation_name":"regulates","term_name":"tyrosine phosphorylation of STAT protein","termid":"GO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042522","GO:0042513","GO:0042528","GO:0042516","GO:0042510","GO:0042519","GO:0042525"],"synonyms":[{"name":"regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0042509"}


id: PBO:0055276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2703","termid":"PBO:0055276"}


id: GO:2001093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a galactotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"galactotriose transport","termid":"GO:2001093"}


id: MONDO:0850199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary immunodeficiency disease that results from defeciency in the number or function of CD56+CD3− NK cell in peripheral blood.","definition_xrefs":["DOID:0080709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"NK cell deficiency","secondary_identifiers":["MEDGEN:1644714","UMLS:C4693357"],"termid":"MONDO:0850199","xrefs":{"Monarch":{"xref_id":"0850199"}}}


id: PBO:0059955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 41","termid":"PBO:0059955"}


id: MONDO:1011684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alloimmune hemolytic anemia of the newborn, non-human animal","secondary_identifiers":["OMIA:000028"],"termid":"MONDO:1011684","xrefs":{"Monarch":{"xref_id":"1011684"}}}


id: GO:0090527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of actin filaments.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete actin filament reorganization (obsolete GO:0090527)","termid":"GO:0090527"}


id: MONDO:0005767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe condition resulting from bacteria invading healthy muscle from adjacent traumatized muscle or soft tissue. The infection originates in a wound contaminated with bacteria of the genus clostridium. C. perfringens accounts for the majority of cases (over eighty percent), while C. noyvi, C. septicum, and C. histolyticum cause most of the other cases.","definition_xrefs":["MESH:D005738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"bacterial infectious disease with sepsis","termid":"MONDO:0005229"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"},{"relation_name":"is_a","term_name":"infection due to clostridium perfringens","termid":"MONDO:0023149"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"gas gangrene","secondary_identifiers":["EFO:0007279","UMLS:C0017105","ICD10CM:A48.0","ICD9:040.0","DOID:9159","SCTID:80466000","icd11.foundation:1920227791","MEDGEN:8959"],"synonyms":[{"name":"gas bacillus infection","type":"exact"},{"name":"gas gangrene","type":"exact"},{"name":"myonecrosis","type":"exact"}],"termid":"MONDO:0005767","xrefs":{"Monarch":{"xref_id":"0005767"}}}


id: GO:0071802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of podosome assembly.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of podosome assembly","termid":"GO:0071801"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"podosome assembly","termid":"GO:0071800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of podosome assembly","synonyms":[{"name":"down regulation of podosome assembly","type":"exact"},{"name":"down-regulation of podosome assembly","type":"exact"},{"name":"downregulation of podosome assembly","type":"exact"},{"name":"inhibition of podosome assembly","type":"narrow"}],"termid":"GO:0071802"}


id: PBO:0073697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle and kinetochore associated complex subunit 2 pseudogene 1","termid":"PBO:0073697"}


id: PBO:0074219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC44A3 pseudogene 1","termid":"PBO:0074219"}


id: MONDO:0971015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class II deficiency","termid":"MONDO:0008855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MHC class II deficiency 4","secondary_identifiers":["OMIM:620817","MEDGEN:347176","UMLS:C1859537"],"termid":"MONDO:0971015","xrefs":{"Monarch":{"xref_id":"0971015"}}}


id: PBO:0040050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1B pseudogene 1","termid":"PBO:0040050"}


id: GO:0015926
data:
  {"annotated_genes":["SJAG_05001","SJAG_03280","SJAG_01171","SJAG_02478","SJAG_02192","SJAG_03295","SJAG_02718","SJAG_03824","SJAG_02590","SJAG_02076","SJAG_02446","SJAG_02131","SJAG_01017","SJAG_04363","SJAG_01888","SJAG_04301","SJAG_00667","SJAG_03444","SJAG_03646","SJAG_02649"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74941,76620],"is_not":false,"summary":null,"term":"GO:0015926"},{"annotations":[101398,101397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004558"},{"annotations":[115419,87240,108193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008422"},{"annotations":[87168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106407"},{"annotations":[78775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004573"},{"annotations":[59689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004339"},{"annotations":[68540,57847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051118"},{"annotations":[79915,73987,77638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042973"},{"annotations":[73088,101746,101747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046557"},{"annotations":[70270,70437,76752,94898,73091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004338"},{"annotations":[76472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004575"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosyl compounds, substances containing a group derived from a cyclic form of glucose or a glucose derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02076":null,"SJAG_02131":null,"SJAG_02192":null,"SJAG_02446":null,"SJAG_02478":null,"SJAG_02590":null,"SJAG_02649":null,"SJAG_02718":null,"SJAG_03280":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_03824":null,"SJAG_04301":null,"SJAG_04363":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"glucosidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015926","terms_by_termid":{"GO:0004338":null,"GO:0004339":null,"GO:0004558":null,"GO:0004573":null,"GO:0004575":null,"GO:0008422":null,"GO:0015926":null,"GO:0042973":null,"GO:0046557":null,"GO:0051118":null,"GO:0106407":null}}


id: FYPO:0005840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that does not have uniform thickness and does not extend over the entire cell division site.","definition_xrefs":["PMID:26877082","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"incomplete, asymmetric septum","synonyms":[{"name":"discontinuous, asymmetric secondary septum","type":"exact"},{"name":"incomplete, asymmetric secondary cell septum","type":"exact"},{"name":"incomplete, asymmetric secondary cell septum during mitotic cell cycle","type":"related"},{"name":"incomplete, asymmetric secondary cell septum during vegetative growth","type":"exact"},{"name":"incomplete, asymmetric secondary septum","type":"exact"}],"termid":"FYPO:0005840"}


id: PBO:0039220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member E2","termid":"PBO:0039220"}


id: GO:0048367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the shoot system over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot system development","secondary_identifiers":["GO:0022621"],"synonyms":[{"name":"shoot development","type":"exact"}],"termid":"GO:0048367"}


id: SO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a premature start codon is gained.","definition_xrefs":["Sanger:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_premature_start_codon_variant","termid":"SO:0001983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_premature_start_codon_gain_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"5 prime UTR premature start codon gain variant","type":"exact"},{"name":"Jannovar:5_prime_UTR_premature_start_codon_gain_variant","type":"exact"},{"name":"snpEff:START_GAINED","type":"exact"}],"termid":"SO:0001988"}


id: PBO:0073307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERPINE1 mRNA binding protein 1 pseudogene 3","termid":"PBO:0073307"}


id: MONDO:0003541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute lymphoblastic leukemia occurring during adulthood.","definition_xrefs":["NCIT:C4967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"adult acute lymphoblastic leukemia","secondary_identifiers":["MEDGEN:199693","DOID:5604","UMLS:C0751606"],"synonyms":[{"name":"acute lymphoblastic leukaemia (ALL)","type":"broad"},{"name":"acute lymphoblastic leukemia (ALL)","type":"broad"},{"name":"adult ALL","type":"exact"},{"name":"adult acute lymphoblastic leukemia","type":"exact"},{"name":"adult acute lymphocytic leukaemia","type":"exact"},{"name":"adult acute lymphocytic leukemia","type":"exact"},{"name":"adult acute lymphogenous leukaemia","type":"exact"},{"name":"adult acute lymphogenous leukemia","type":"exact"},{"name":"adult acute lymphoid leukaemia","type":"exact"},{"name":"adult acute lymphoid leukemia","type":"exact"},{"name":"adult precursor lymphoblastic leukaemia","type":"exact"},{"name":"adult precursor lymphoblastic leukemia","type":"exact"}],"termid":"MONDO:0003541","xrefs":{"Monarch":{"xref_id":"0003541"}}}


id: SO:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that is invalidated due to polyA priming.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invalidated","termid":"SO:0000790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated_by_genomic_polyA_primed_cDNA","synonyms":[{"name":"invalidated by genomic polyA primed cDNA","type":"exact"}],"termid":"SO:0000415"}


id: PBO:0039946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 5A","termid":"PBO:0039946"}


id: PR:O74407
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aspartate--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.07c","secondary_identifiers":["UniProtKB:O74407"],"synonyms":[{"name":"AspRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DARS","type":"exact"},{"name":"aspartyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74407"}


id: PBO:0082005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 5 pseudogene 1","termid":"PBO:0082005"}


id: PBO:0078508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 2","termid":"PBO:0078508"}


id: GO:0014897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of an organ due to an increase in size of muscle cells without cell division. In the case of striated muscle, this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle hypertrophy","termid":"GO:0014897"}


id: PBO:0062912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2X 5","termid":"PBO:0062912"}


id: MONDO:0020362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inverse Marcus-Gunn phenomenon is a rare congenital synkinesis where jaw opening by the pterygoid muscle (during eating or yawning) causes eyelid drooping from inhibition of the oculomotor nerve to the levator palpebrae superioris. Familial occurrence has been reported.","definition_xrefs":["Orphanet:98951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"jaw-winking syndrome","termid":"MONDO:0007946"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverse Marcus-Gunn phenomenon","secondary_identifiers":["MEDGEN:1784220","UMLS:C5548210","icd11.foundation:348052110","GARD:19608"],"termid":"MONDO:0020362","xrefs":{"Monarch":{"xref_id":"0020362"}}}


id: PBO:0030219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_alpha,alpha-trehalase_activity","termid":"PBO:0030219"}


id: MONDO:0011120
data:
  {"annotated_genes":["SJAG_01466","SJAG_04156","SJAG_03712","SJAG_00106","SJAG_04425","SJAG_04459","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87148,87149,87150,87151,87152,87153,87154],"is_not":false,"summary":null,"term":"MONDO:0011120"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated spina bifida","termid":"MONDO:0019351"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01466":null,"SJAG_03712":null,"SJAG_04042":null,"SJAG_04156":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"neural tube defects, folate-sensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:601634","MEDGEN:355746","MESH:C536409","UMLS:C1866558"],"synonyms":[{"name":"NTD, folate-sensitive","type":"related"},{"name":"NTDFS","type":"related"},{"name":"neural tube defects, folate-sensitive","type":"exact"},{"name":"neural tube defects, folate-sensitive, susceptibility to","type":"related"},{"name":"neural tube defects, susceptibility to","type":"related"},{"name":"spina bifida, folate-sensitive","type":"related"}],"termid":"MONDO:0011120","terms_by_termid":{"MONDO:0011120":null},"xrefs":{"Monarch":{"xref_id":"0011120"}}}


id: FYPO:0004673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, contains more than one septum, and contains a nucleus that is broken into small fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"fragmented nucleus","termid":"FYPO:0006661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001320","FYPO:0000004","FYPO:0000631","FYPO:0000032","FYPO:0005447","FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated multiseptate vegetative cell with fragmented nucleus","synonyms":[{"name":"elongated inviable multiseptate cell with fragmented nucleus","type":"exact"},{"name":"inviable elongated multiseptate cell with fragmented nucleus during vegetative growth","type":"exact"},{"name":"inviable elongated multiseptate vegetative cell with fragmented DNA","type":"related"},{"name":"inviable elongated multiseptate vegetative cell with fragmented nucleus during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multiseptate vegetative cell with fragmented nucleus","type":"exact"}],"termid":"FYPO:0004673"}


id: MONDO:0018231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary bone dysplasia with progressive ossification of skin, skeletal muscle, fascia, tendons and ligaments (obsolete MONDO:0018231)","secondary_identifiers":["Orphanet:364531"],"synonyms":[{"name":"primary osteodysplasia with progressive ossification of skin, skeletal muscle, fascia, tendons and ligaments","type":"exact"},{"name":"primary skeletal dysplasia with progressive ossification of skin, skeletal muscle, fascia, tendons and ligaments","type":"exact"}],"termid":"MONDO:0018231","xrefs":{"Monarch":{"xref_id":"0018231"}}}


id: PBO:0081271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 35","termid":"PBO:0081271"}


id: PBO:0030773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_hydroxyurea","termid":"PBO:0030773"}


id: PBO:0062947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 5","termid":"PBO:0062947"}


id: GO:0006043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosamine metabolic process","termid":"GO:0006041"},{"relation_name":"is_a","term_name":"glucosamine-containing compound catabolic process","termid":"GO:1901072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucosamine catabolic process","synonyms":[{"name":"chitosamine catabolic process","type":"exact"},{"name":"chitosamine catabolism","type":"exact"},{"name":"glucosamine breakdown","type":"exact"},{"name":"glucosamine catabolism","type":"exact"},{"name":"glucosamine degradation","type":"exact"}],"termid":"GO:0006043"}


id: MONDO:0800433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian cancer, familial, susceptibility to, 1","secondary_identifiers":["UMLS:C2676678","MEDGEN:393561"],"termid":"MONDO:0800433","xrefs":{"Monarch":{"xref_id":"0800433"}}}


id: MONDO:1010580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in golden hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, golden hamster","secondary_identifiers":["OMIA:000424-10036"],"termid":"MONDO:1010580","xrefs":{"Monarch":{"xref_id":"1010580"}}}


id: PATO:0000563
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000563 relative size value (obsolete PATO:0000563)","termid":"PATO:0000563"}


id: PBO:0091005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1708 family conserved fungal protein, cell division site","termid":"PBO:0091005"}


id: GO:1990970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a trans-activation response (TAR) element, a hairpin RNA structure located at the 5' end of all HIV-1 transcripts, and which is required for trans-activation of a viral promoter.","definition_xrefs":["GOC:PARL","PMID:25116364","Wikipedia:Trans-activation_response_element_(TAR)","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-miRNA binding","termid":"GO:0070883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"trans-activation response element binding","synonyms":[{"name":"TAR binding","type":"exact"}],"termid":"GO:1990970"}


id: PBO:0079148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPAN9 intronic transcript 1","termid":"PBO:0079148"}


id: PBO:0072560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding D","termid":"PBO:0072560"}


id: MONDO:0019435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of juvenile idiopathic arthritis defined by the presence of arthritis affecting five or more separate joints during the first six months of disease, with positive serologic testing for rheumatoid factor.","definition_xrefs":["NCIT:C119034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyarticular juvenile idiopathic arthritis","termid":"MONDO:0018456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatoid factor-positive polyarticular juvenile idiopathic arthritis","secondary_identifiers":["MEDGEN:855737","EFO:0009731","UMLS:C3890733","GARD:19064","Orphanet:85435","NANDO:2201058"],"synonyms":[{"name":"juvenile idiopathic rheumatoid factor-positive polyarthritis","type":"exact"},{"name":"polyarthritis with rheumatoid factor","type":"exact"},{"name":"polyarticular JIA, RF+","type":"exact"},{"name":"polyarticular juvenile idiopathic arthritis, RF+","type":"exact"},{"name":"polyarticular juvenile idiopathic arthritis, rheumatoid Factor Positive","type":"exact"},{"name":"rheumatoid factor-positive polyarticular JIA","type":"exact"}],"termid":"MONDO:0019435","xrefs":{"Monarch":{"xref_id":"0019435"}}}


id: MONDO:0018837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vasculitis, characterized by inflammatory lesions in the wall of vessels, may be due to different viruses.","definition_xrefs":["Orphanet:48435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary vasculitis","termid":"MONDO:0018640"},{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postinfectious vasculitis","secondary_identifiers":["SCTID:724063005","MEDGEN:1376009","UMLS:C4510302","GARD:18835"],"termid":"MONDO:0018837","xrefs":{"Monarch":{"xref_id":"0018837"}}}


id: GO:0140202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a polyamine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:17218313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"polyamine import across plasma membrane","termid":"GO:0140202"}


id: GO:0030756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + isoorientin = S-adenosyl-L-homocysteine + H+ + isoscoparin.","definition_xrefs":["RHEA:24096","EC:2.1.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"isoorientin 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:ISOORIENTIN-3-O-METHYLTRANSFERASE-RXN","KEGG_REACTION:R03731"],"synonyms":[{"name":"S-adenosyl-L-methionine:isoorientin 3'-O-methyltransferase activity","type":"related"},{"name":"isoorientin 3'-methyltransferase activity","type":"related"}],"termid":"GO:0030756"}


id: PBO:0004949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Spf38","termid":"PBO:0004949"}


id: GO:0106394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"},{"relation_name":"negatively_regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of palmitic acid catabolic process","termid":"GO:0106394"}


id: MONDO:0018903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the striated muscle of mammals by parasites of the genus sarcocystis. Disease symptoms such as vomiting, diarrhea, muscle weakness, and paralysis are produced by sarcocystin, a toxin produced by the organism.","definition_xrefs":["MESH:D012523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coccidiosis","termid":"MONDO:0005707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcocystosis","secondary_identifiers":["ICD9:136.5","Orphanet:54368","DOID:9640","MedDRA:10039483","SCTID:88905005","GARD:18848","icd11.foundation:261748740","MEDGEN:48559","EFO:0007476","UMLS:C0036231"],"synonyms":[{"name":"sarcosporidiosis","type":"exact"}],"termid":"MONDO:0018903","xrefs":{"Monarch":{"xref_id":"0018903"}}}


id: PBO:0110345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDCA7 pseudogene 1","termid":"PBO:0110345"}


id: PBO:0046922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 41 member A, Y-linked 1","termid":"PBO:0046922"}


id: MONDO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyshormonogenic goiter","secondary_identifiers":["ICD9:246.1","UMLS:C0152077","DOID:12175","SCTID:190304001","MEDGEN:508873"],"termid":"MONDO:0001460","xrefs":{"Monarch":{"xref_id":"0001460"}}}


id: GO:0033539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway in which the initial step of each oxidation cycle, which converts an acyl-CoA to a trans-2-enoyl-CoA, is catalyzed by acyl-CoA dehydrogenase; the electrons removed by oxidation pass through the respiratory chain to oxygen and leave H2O as the product. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["GOC:mah","MetaCyc:FAO-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:0033539"}


id: PBO:0047890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(6)(q13)","termid":"PBO:0047890"}


id: FYPO:0009022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-isoleucine as the nitrogen source.","definition_xrefs":["PomBase:mlr","PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on isoleucine nitrogen source","synonyms":[{"name":"decreased growth on isoleucine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on isoleucine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with isoleucine nitrogen source","type":"related"},{"name":"reduced cell growth on isoleucine nitrogen source","type":"related"},{"name":"slow cell growth on isoleucine nitrogen source","type":"narrow"}],"termid":"FYPO:0009022"}


id: GO:0019953
data:
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id: PBO:0067752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 51","termid":"PBO:0067752"}


id: PR:P79009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2502 gene.","definition_xrefs":["UniProtKB:P79009","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC694.05c","synonyms":[{"name":"S31-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps2502","type":"exact"}],"termid":"PR:P79009"}


id: GO:0021547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the midbrain-hindbrain boundary. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate.","definition_xrefs":["GOC:dgh","GOC:isa_complete","PMID:15541513","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"},{"relation_name":"part_of","term_name":"midbrain-hindbrain boundary development","termid":"GO:0030917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary initiation","synonyms":[{"name":"MHB biosynthesis","type":"exact"},{"name":"MHB formation","type":"exact"},{"name":"isthmus biosynthesis","type":"related"},{"name":"isthmus formation","type":"related"},{"name":"midbrain-hindbrain boundary biosynthesis","type":"exact"},{"name":"midbrain-hindbrain boundary formation","type":"exact"}],"termid":"GO:0021547"}


id: FYPO:0000937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cortical microtubule cytoskeleton is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex during vegetative growth","termid":"FYPO:0000929"},{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal protein localization to cortical microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to cortical microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"decreased protein localisation to cortical microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"decreased protein localization to cortical microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to cortical microtubule cytoskeleton during vegetative growth","type":"exact"}],"termid":"FYPO:0000937"}


id: GO:0043634
data:
  {"annotated_genes":["SJAG_03984","SJAG_16455","SJAG_01176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76038,99417,113058],"is_not":false,"summary":null,"term":"GO:0043634"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a noncoding RNA (ncRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target ncRNA.","definition_xrefs":["GOC:dgf","GOC:jl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation-dependent RNA catabolic process","termid":"GO:0043633"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_03984":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyadenylation-dependent ncRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(A)-dependent ncRNA catabolic process","type":"related"}],"termid":"GO:0043634","terms_by_termid":{"GO:0043634":null}}


id: PBO:0055025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2440","termid":"PBO:0055025"}


id: GO:0086087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of a bundle of His cell contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in bundle of His cell action potential repolarization","termid":"GO:0086087"}


id: PBO:0068268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 4","termid":"PBO:0068268"}


id: GO:0099039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a sphingolipid molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid translocation","termid":"GO:0034204"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"sphingolipid translocation","termid":"GO:0099039"}


id: PBO:0061830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxoglutarate dehydrogenase","termid":"PBO:0061830"}


id: PBO:0082804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; yeast specific, no metazoan counterpart; interacts with mRNA in commitment complex","termid":"PBO:0082804"}


id: PBO:0052520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 33","termid":"PBO:0052520"}


id: PBO:0059391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S25","termid":"PBO:0059391"}


id: PBO:0029907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K4_methylation","termid":"PBO:0029907"}


id: PBO:0075726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRM pseudogene 2","termid":"PBO:0075726"}


id: GO:0061780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The protein localization to chromatin by which a cohesin ring complex is topologically linked to DNA as part of the mitotic cell cycle.","definition_xrefs":["GOC:vw","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cohesin loading (obsolete GO:0061780)","termid":"GO:0061780"}


id: MONDO:0958118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"},{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"autosomal recessive combined immunodeficiency due to IL6R deficiency","secondary_identifiers":["MEDGEN:1863760","UMLS:C5925112","Orphanet:656326"],"termid":"MONDO:0958118","xrefs":{"Monarch":{"xref_id":"0958118"}}}


id: PBO:0068773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 10, pseudogene","termid":"PBO:0068773"}


id: GO:0015881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of creatine across a membrane.","definition_xrefs":["GOC:pr","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"creatine transmembrane transport","secondary_identifiers":["GO:1902598"],"synonyms":[{"name":"creatine transport","type":"broad"}],"termid":"GO:0015881"}


id: MONDO:0003238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign, usually polypoid neoplasm that arises from the cervix. It is characterized by the presence of a glandular component and a smooth muscle cell component. Variants include the endocervical type, endometrial type, and atypical polypoid adenomyoma.","definition_xrefs":["NCIT:C40231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenomyoma","termid":"MONDO:0005635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical adenomyoma","secondary_identifiers":["DOID:4995","UMLS:C1516404","MEDGEN:275705"],"synonyms":[{"name":"cervical adenomyoma","type":"exact"}],"termid":"MONDO:0003238","xrefs":{"Monarch":{"xref_id":"0003238"}}}


id: PBO:0077769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 5","termid":"PBO:0077769"}


id: PBO:0073726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 7","termid":"PBO:0073726"}


id: MONDO:0018730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of rare venous malformation that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete rare genetic venous malformation (obsolete MONDO:0018730)","secondary_identifiers":["Orphanet:459548"],"synonyms":[{"name":"genetic rare venous malformation","type":"exact"}],"termid":"MONDO:0018730","xrefs":{"Monarch":{"xref_id":"0018730"}}}


id: FYPO:0000769
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id: MONDO:1011687
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic neutropenia, non-human animal","secondary_identifiers":["OMIA:000248"],"termid":"MONDO:1011687","xrefs":{"Monarch":{"xref_id":"1011687"}}}


id: GO:0090549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of a carbon source.","definition_xrefs":["PMID:18245858","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbon starvation","termid":"GO:0090549"}


id: GO:0099142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when ATP has been bound by the channel complex or one of its constituent parts on the intracellular side of the plasma membrane.","definition_xrefs":["PMID:9755289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly ligand-gated monoatomic ion channel activity","termid":"GO:0005217"},{"relation_name":"is_a","term_name":"ATP-gated ion channel activity","termid":"GO:0035381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"intracellularly ATP-gated ion channel activity","termid":"GO:0099142"}


id: PBO:0050512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C12","termid":"PBO:0050512"}


id: RO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between an independent continuant (the bearer) and a specifically dependent continuant (the dependent), in which the dependent specifically depends on the bearer for its existence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bearer_of","termid":"RO:0000053"}


id: MONDO:0100490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital breast hypoplasia/aplasia","termid":"MONDO:0015855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breasts and/or nipples, aplasia or hypoplasia of, 1","secondary_identifiers":["OMIM:113700","GARD:15045"],"synonyms":[{"name":"BNAH1","type":"exact"},{"name":"amastia","type":"related"},{"name":"amazia","type":"related"},{"name":"athelia","type":"related"},{"name":"breasts and/or nipples, aplasia or hypoplasia of, 1","type":"exact"}],"termid":"MONDO:0100490","xrefs":{"Monarch":{"xref_id":"0100490"}}}


id: PBO:0040750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxybutyrate dehydrogenase 2","termid":"PBO:0040750"}


id: PBO:0066198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 15B","termid":"PBO:0066198"}


id: PBO:0051015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 mRNA binding protein 2","termid":"PBO:0051015"}


id: PBO:0091617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix protein, YjgF family protein Mmf2, reactive intermediate imine deaminase A homolog","termid":"PBO:0091617"}


id: GO:1900176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry in the lateral mesoderm.","definition_xrefs":["GOC:vk","GOC:BHF","GOC:TermGenie","PMID:15084459"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1900176)","synonyms":[{"name":"down-regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"downregulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"inhibition of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"negative regulation of nodal signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1900176"}


id: MONDO:0011663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile primary lateral sclerosis (JPLS) is a very rare motor neuron disease characterized by progressive upper motor neuron dysfunction leading to loss of the ability to walk with wheelchair dependence, and subsequently, loss of motor speech production.","definition_xrefs":["Orphanet:247604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral sclerosis","termid":"MONDO:0018155"},{"relation_name":"is_a","term_name":"ALS2-related motor neuron disease","termid":"MONDO:0100227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"juvenile primary lateral sclerosis","secondary_identifiers":["MEDGEN:342870","GARD:4485","UMLS:C1853396","MESH:C536416","OMIM:606353","SCTID:717964007"],"synonyms":[{"name":"JPLS","type":"exact"},{"name":"PLS juvenile","type":"related"},{"name":"PLSJ","type":"related"},{"name":"Pls, juvenile","type":"related"},{"name":"juvenile PLS","type":"exact"},{"name":"primary lateral sclerosis, juvenile","type":"related"}],"termid":"MONDO:0011663","xrefs":{"Monarch":{"xref_id":"0011663"}}}


id: PBO:0082275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anillin-like protein involved in bud-site selection; required for the axial budding pattern; required for the formation and disassembly of the double septin ring structure, and generally for septin organization; functions as a platform linking the cytokinesis tag septins to the axial landmark through its multiple domains; in vivo substrate of Cdc28p/Clb2p","termid":"PBO:0082275"}


id: PBO:0042064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 127","termid":"PBO:0042064"}


id: GO:0006383
data:
  {"annotated_genes":["SJAG_00619","SJAG_00142","SJAG_04161","SJAG_03689","SJAG_01713","SJAG_01444","SJAG_03144","SJAG_02242","SJAG_03931","SJAG_03761","SJAG_03035","SJAG_03354","SJAG_01827","SJAG_00067","SJAG_04261","SJAG_00585","SJAG_04408","SJAG_03546","SJAG_00637","SJAG_01765","SJAG_03181","SJAG_03014","SJAG_00731","SJAG_03921","SJAG_02101","SJAG_02898","SJAG_04030","SJAG_03578","SJAG_02070","SJAG_00421","SJAG_03007","SJAG_01313","SJAG_04934","SJAG_03120","SJAG_05339","SJAG_02600","SJAG_02815"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62295,62896,63011,63974,64027,65973,66641,69891,101305,102480,103135,105597,111269,112441,116559],"is_not":false,"summary":null,"term":"GO:0006383"},{"annotations":[73587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042791"},{"annotations":[73566],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0016480"},{"annotations":[75744,77929],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006359"},{"annotations":[71571,102863],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070898"},{"annotations":[115783,99688,97950,92822],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006386"},{"annotations":[106726,87976,95370,79612,56994,115158,88707,73589,70887],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006384"},{"annotations":[74911,76299,76801,79404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042797"}]},"cv_name":"biological_process","definition":"The synthesis of RNA from a DNA template by RNA polymerase III, originating at an RNAP III promoter.","definition_xrefs":["GOC:jl","PMID:12381659","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00067":null,"SJAG_00142":null,"SJAG_00421":null,"SJAG_00585":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_01827":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02242":null,"SJAG_02600":null,"SJAG_02815":null,"SJAG_02898":null,"SJAG_03007":null,"SJAG_03014":null,"SJAG_03035":null,"SJAG_03120":null,"SJAG_03144":null,"SJAG_03181":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_03578":null,"SJAG_03689":null,"SJAG_03761":null,"SJAG_03921":null,"SJAG_03931":null,"SJAG_04030":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04408":null,"SJAG_04934":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-74158","GO:0001041","GO:0001009","GO:0001035"],"synonyms":[{"name":"RNA polymerase III transcription factor activity","type":"related"},{"name":"U2 snRNA transcription (S. cerevisiae)","type":"narrow"},{"name":"U6 snRNA transcription (mammalian)","type":"narrow"},{"name":"transcription from Pol III promoter","type":"exact"},{"name":"transcription from RNA polymerase III promoter","type":"exact"},{"name":"transcription from RNA polymerase III type 2 promoter","type":"narrow"},{"name":"transcription from RNA polymerase III type 3 promoter","type":"narrow"},{"name":"transcription from a RNA polymerase III hybrid type promoter","type":"narrow"}],"termid":"GO:0006383","terms_by_termid":{"GO:0006359":null,"GO:0006383":null,"GO:0006384":null,"GO:0006386":null,"GO:0016480":null,"GO:0042791":null,"GO:0042797":null,"GO:0070898":null}}


id: PBO:0069991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1286, pseudogene","termid":"PBO:0069991"}


id: _global:involved_in_negative_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' negatively regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"_global:involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_negative_regulation_of","secondary_identifiers":["RO:0002430"],"termid":"_global:involved_in_negative_regulation_of"}


id: PBO:0044823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109F (pseudogene)","termid":"PBO:0044823"}


id: GO:1990762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase involved in cytoplasmic translation.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanyl-tRNA aminoacylation","termid":"GO:0006419"},{"relation_name":"part_of","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006399","GO:0002181","GO:0010467","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"cytoplasmic alanyl-tRNA aminoacylation","termid":"GO:1990762"}


id: PBO:0052074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1","termid":"PBO:0052074"}


id: FYPO:0001787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of sterol binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal lipid binding","termid":"FYPO:0006942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal sterol binding","synonyms":[{"name":"normal cholesterol binding","type":"narrow"},{"name":"normal ergosterol binding","type":"narrow"}],"termid":"FYPO:0001787"}


id: PBO:0080432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 16","termid":"PBO:0080432"}


id: GO:1904027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of collagen fibril organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25451920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix organization","termid":"GO:1903054"},{"relation_name":"is_a","term_name":"regulation of collagen fibril organization","termid":"GO:1904026"},{"relation_name":"negatively_regulates","term_name":"collagen fibril organization","termid":"GO:0030199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen fibril organization","synonyms":[{"name":"down regulation of collagen fibril organisation","type":"exact"},{"name":"down regulation of collagen fibril organization","type":"exact"},{"name":"down regulation of fibrillar collagen organization","type":"exact"},{"name":"down-regulation of collagen fibril organisation","type":"exact"},{"name":"down-regulation of collagen fibril organization","type":"exact"},{"name":"down-regulation of fibrillar collagen organization","type":"exact"},{"name":"downregulation of collagen fibril organisation","type":"exact"},{"name":"downregulation of collagen fibril organization","type":"exact"},{"name":"downregulation of fibrillar collagen organization","type":"exact"},{"name":"inhibition of collagen fibril organisation","type":"narrow"},{"name":"inhibition of collagen fibril organization","type":"narrow"},{"name":"inhibition of fibrillar collagen organization","type":"narrow"},{"name":"negative regulation of collagen fibril organisation","type":"exact"},{"name":"negative regulation of fibrillar collagen organization","type":"exact"}],"termid":"GO:1904027"}


id: GO:0046621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of growth of an organ of an organism.","definition_xrefs":["GOC:tb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organ growth","termid":"GO:0046620"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"organ growth","termid":"GO:0035265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of organ growth","termid":"GO:0046621"}


id: MONDO:0005543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune hepatitis characterized by the presence of antinuclear antibody (ANA) and antismooth-muscle antibody (ASMA).","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hepatitis","termid":"MONDO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"autoimmune hepatitis type 1","secondary_identifiers":["GARD:22251","SCTID:197284004","SCTID:721711009","UMLS:C4303164","icd11.foundation:260422751","MEDGEN:928833","ICD9:571.49","Orphanet:563576"],"synonyms":[{"name":"autoimmune hepatitis type 1","type":"exact"},{"name":"type 1 AIH","type":"exact"}],"termid":"MONDO:0005543","xrefs":{"Monarch":{"xref_id":"0005543"}}}


id: PBO:0029005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-telophase_nuclear_clustering","termid":"PBO:0029005"}


id: GO:0005856
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id: FYPO:0003275
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id: PBO:0001336
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  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by heat shock","termid":"PBO:0001336"}


id: MONDO:0043523
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Poisoning occurring after exposure to cadmium compounds or fumes. It may cause gastrointestinal syndromes, anemia, or pneumonitis.","definition_xrefs":["MESH:D002105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadmium poisoning","secondary_identifiers":["SCTID:3398004"],"synonyms":[{"name":"Itai Itai","type":"related"},{"name":"Itai-Itai","type":"related"},{"name":"Poisonings, cadmium","type":"related"},{"name":"cadmium Poisonings","type":"related"},{"name":"cadmium poisoning","type":"exact"},{"name":"poisoning, cadmium","type":"related"}],"termid":"MONDO:0043523","xrefs":{"Monarch":{"xref_id":"0043523"}}}


id: PBO:0080833
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-tRNA synthetase 1","termid":"PBO:0080833"}


id: MONDO:0019443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenitally uncorrected transposition of the great arteries (congenitally uncorrected TGA), also referred to as complete transposition, is a congenital cardiac malformation characterized by atrioventricular concordance and ventriculoarterial (VA) discordance.","definition_xrefs":["Orphanet:860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposition of the great arteries","termid":"MONDO:0000153"},{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dextro-looped transposition of the great arteries","secondary_identifiers":["DOID:0060770","UMLS:C5671327","NANDO:1200698","GARD:5476","MEDGEN:1812310","OMIMPS:608808"],"synonyms":[{"name":"D-TGA","type":"exact"},{"name":"DTGA","type":"exact"},{"name":"congenitally uncorrected transposition of the great arteries","type":"exact"},{"name":"congenitally uncorrected transposition of the great vessels","type":"exact"},{"name":"isolated ventriculoarterial discordance","type":"exact"},{"name":"ventriculoarterial discordance with atrioventricular concordance","type":"exact"}],"termid":"MONDO:0019443","xrefs":{"Monarch":{"xref_id":"0019443"}}}


id: FYPO:0001230
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of all or part of the cell cortex is abnormal when the cell is subject to nitrogen starvation. The cell cortex is the region of a cell that lies just beneath the plasma membrane.","definition_xrefs":["GO:0005938","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cortex morphology","termid":"FYPO:0001229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cortex morphology during nitrogen starvation","synonyms":[{"name":"abnormal cell cortex morphology during nitrogen depletion","type":"exact"},{"name":"abnormal cell cortex morphology during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0001230"}


id: PBO:0060585
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id: PBO:0063567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase B","termid":"PBO:0063567"}


id: MONDO:0011959
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sweet's syndrome (the eponym for acute febrile neutrophilic dermatosis) is characterized by a constellation of clinical symptoms, physical features, and pathologic findings which include fever, neutrophilia, tender erythematous skin lesions (papules, nodules, and plaques), and a diffuse infiltrate consisting predominantly of mature neutrophils that are typically located in the upper dermis.","definition_xrefs":["Orphanet:3243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sweet syndrome","secondary_identifiers":["GARD:521","SCTID:84625002","ICD9:702.8","NCIT:C85177","OMIM:608068","UMLS:C0085077","MedDRA:10000748","MESH:D016463","DOID:0080746","NORD:1749","MEDGEN:43097","icd11.foundation:195212152"],"synonyms":[{"name":"Afnd","type":"related"},{"name":"Gomm button disease","type":"related"},{"name":"Gomm-button disease","type":"related"},{"name":"acute febrile neutrophilic dermatosis","type":"exact"},{"name":"neutrophilic dermatosis, acute febrile","type":"related"},{"name":"sweet syndrome","type":"exact"}],"termid":"MONDO:0011959","xrefs":{"Monarch":{"xref_id":"0011959"}}}


id: PBO:0049073
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 89B","termid":"PBO:0049073"}


id: PBO:0034459
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id: MONDO:0000321
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tularemia that results in bacteremia and has symptom fever, has symptom chills, has symptom myalgia, has symptom malaise, and has symptom weight loss.","definition_xrefs":["DOID:0050383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tularemia","termid":"MONDO:0018077"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"typhoidal tularemia","secondary_identifiers":["MEDGEN:633510","UMLS:C0473876","SCTID:398554008"],"termid":"MONDO:0000321","xrefs":{"Monarch":{"xref_id":"0000321"}}}


id: PBO:0070202
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 127 pseudogene","termid":"PBO:0070202"}


id: PBO:0040109
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with SH3 domain, ankyrin repeat and PH domain 1","termid":"PBO:0040109"}


id: GO:0075224
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium germination","termid":"GO:0075223"},{"relation_name":"is_a","term_name":"positive regulation of sporangium development","termid":"GO:0075311"},{"relation_name":"positively_regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporangium germination","synonyms":[{"name":"positive regulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075224"}


id: MONDO:0007305
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebral dysplasia","secondary_identifiers":["HP:0008469","MESH:C566140","OMIM:118005","UMLS:C1861693","MEDGEN:396199"],"synonyms":[{"name":"cervical vertebral dysplasia","type":"exact"},{"name":"cervical vertebral dysplasia (disease)","type":"exact"}],"termid":"MONDO:0007305","xrefs":{"Monarch":{"xref_id":"0007305"}}}


id: PBO:0038848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS16 divergent transcript","termid":"PBO:0038848"}


id: PBO:0061879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein 2","termid":"PBO:0061879"}


id: PBO:0072473
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 2","termid":"PBO:0072473"}


id: PBO:0048490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 2","termid":"PBO:0048490"}


id: PBO:0075764
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 3","termid":"PBO:0075764"}


id: PBO:0031488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle","termid":"PBO:0031488"}


id: MONDO:0100231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A susceptibility or predisposition to psoriatic arthritis, in which the cause of the disease is a mutation in the LTA gene. Psoriatic arthritis affects more than 10% of patients with psoriasis and, in most cases, there is an association between the severity of the arthritis and the skin involvement.","definition_xrefs":["OMIM:607507","MONDO:patterns/susceptibility_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psoriatic arthritis, susceptibility to","termid":"MONDO:0100232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriatic arthritis, susceptibility to, 1","secondary_identifiers":["MEDGEN:375279","UMLS:C1843772"],"synonyms":[{"name":"PSORAS1","type":"exact"},{"name":"psoriatic arthritis susceptibility caused by LTA","type":"exact"},{"name":"psoriatic arthritis, susceptibility to","type":"broad"},{"name":"psoriatic arthritis, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0100231","xrefs":{"Monarch":{"xref_id":"0100231"}}}


id: PBO:0051354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-7 (pseudogene)","termid":"PBO:0051354"}


id: MOD:00889
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-prolinium (charged L-proline) residue to N,N-dimethyl-L-proline.","definition_xrefs":["Unimod:36#P"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-proline (L-prolinium) residue","termid":"MOD:00888"},{"relation_name":"is_a","term_name":"N,N-dimethyl-L-proline","termid":"MOD:00075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-proline (from L-prolinium)","termid":"MOD:00889"}


id: GO:0051035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of DNA, deoxyribonucleic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid transmembrane transporter activity","termid":"GO:0051032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"DNA transmembrane transporter activity","termid":"GO:0051035"}


id: PBO:0026804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026804"}


id: PBO:0041322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 74","termid":"PBO:0041322"}


id: GO:0036172
data:
  {"annotated_genes":["SJAG_01970","SJAG_03362","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99330,110241,110242],"is_not":false,"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"A process that generates thiamine (vitamin B1) from derivatives of it without de novo synthesis.","definition_xrefs":["PMID:16952958","PMID:15150256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"},{"relation_name":"is_a","term_name":"thiamine biosynthetic process","termid":"GO:0009228"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03362":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"thiamine salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036172","terms_by_termid":{"GO:0036172":null}}


id: PBO:0005263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dephospho-CoA kinase (predicted)","termid":"PBO:0005263"}


id: PBO:0059744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 18","termid":"PBO:0059744"}


id: GO:0036205
data:
  {"annotated_genes":["SJAG_03387"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70864],"is_not":false,"summary":null,"term":"GO:0036205"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a histone protein by individual cells.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"histone catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"histone protein catabolic process","type":"exact"}],"termid":"GO:0036205","terms_by_termid":{"GO:0036205":null}}


id: PBO:0088280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 6 Pam1","termid":"PBO:0088280"}


id: PBO:0076975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 6","termid":"PBO:0076975"}


id: FYPO:0007596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitophagy","termid":"FYPO:0000500"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitophagy during nitrogen starvation","synonyms":[{"name":"decreased autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen starvation","type":"exact"},{"name":"reduced autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007596"}


id: GO:0140896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a double-stranded DNA or RNA from another organism to cytosolic cyclic GMP-AMP (cGAMP) synthase (cGAS) that activates innate immune responses through production of the second messenger cGAMP, which activates the adaptor STING.","definition_xrefs":["PMID:34261127","PMID:27648547","PMID:34261128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cGAS/STING signaling pathway","termid":"GO:0140896"}


id: GO:0004796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = thromboxane A(2).","definition_xrefs":["EC:5.3.99.5","RHEA:17137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"thromboxane-A synthase activity","secondary_identifiers":["MetaCyc:THROMBOXANE-A-SYNTHASE-RXN","Reactome:R-HSA-5603275","KEGG_REACTION:R02268","Reactome:R-HSA-76500","GO:0008400"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate isomerase activity","type":"related"},{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate thromboxane-A2-isomerase activity","type":"related"},{"name":"cytochrome P450 CYP5","type":"narrow"},{"name":"thromboxane synthase activity","type":"related"},{"name":"thromboxane synthetase activity","type":"related"}],"termid":"GO:0004796"}


id: MOD:01562
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01562"}


id: GO:0042180
data:
  {"annotated_genes":["SJAG_04642","SJAG_01668","SJAG_00933","SJAG_01866","SJAG_04674","SJAG_02106","SJAG_04726","SJAG_02988","SJAG_01043","SJAG_04223","SJAG_01672","SJAG_01820","SJAG_00721","SJAG_01596","SJAG_02960","SJAG_02488","SJAG_04404","SJAG_04000","SJAG_06603","SJAG_03130","SJAG_01402","SJAG_04568","SJAG_01865","SJAG_00459"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006666"},{"annotations":[74259,72523,60860,102588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[104850,59076,60859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"},{"annotations":[70529],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[88978],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904775"},{"annotations":[74917],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[72807,119168,63761,76413,119167,74052,73918,87497,78948,78503,72257,73646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006744"},{"annotations":[119166,115008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006743"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms, as carried out by individual cells. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.","definition_xrefs":["GOC:jl","ISBN:0787650153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01402":null,"SJAG_01596":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_02106":null,"SJAG_02488":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_03130":null,"SJAG_04000":null,"SJAG_04223":null,"SJAG_04404":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ketone metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:29191091":null},"synonyms":[{"name":"ketone metabolism","type":"exact"}],"termid":"GO:0042180","terms_by_termid":{"GO:0006666":null,"GO:0006743":null,"GO:0006744":null,"GO:0010510":null,"GO:0019243":null,"GO:0045717":null,"GO:0061727":null,"GO:1904775":null}}


id: PBO:0038784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacylase 3","termid":"PBO:0038784"}


id: GO:0009978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 13(S)-hydroperoxylinolenate = 12,13(S)-epoxylinolenate + H2O.","definition_xrefs":["PMID:9778849","EC:4.2.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"allene oxide synthase activity","secondary_identifiers":["MetaCyc:RXN1F-19","RHEA:25074","GO:0047987"],"synonyms":[{"name":"(9Z,11E,14Z)-(13S)-hydroperoxyoctadeca-9,11,14-trienoate 12,13-hydro-lyase [(9Z)-(13S)-12,13-epoxyoctadeca-9,11-dienoate-forming]","type":"related"},{"name":"(9Z,11E,14Z)-(13S)-hydroperoxyoctadeca-9,11,14-trienoate 12,13-hydro-lyase activity","type":"related"},{"name":"HPI","type":"related"},{"name":"hydroperoxide dehydratase activity","type":"related"},{"name":"hydroperoxide isomerase activity","type":"related"},{"name":"linoleate hydroperoxide isomerase","type":"related"},{"name":"linoleic acid hydroperoxide isomerase","type":"related"}],"termid":"GO:0009978"}


id: PBO:0116294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidase that deconjugates Smt3/SUMO-1 peptides from proteins; plays a role in chromosome cohesion at centromeric regions, recovery from checkpoint arrest induced by DNA damage or DNA replication defect, and RNA splicing; potential Cdc28p substrate; human homolog PML implicated in promyelocytic leukemia can partially complement yeast null mutant","termid":"PBO:0116294"}


id: FYECO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing glycerol as the sole carbon source, yeast extract and other components. The concentration of glycerol is typically around 2-3% and supplemented with trace amounts of another carbon source (e.g. glucose).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol YE","secondary_identifiers":["FYECO:0000083"],"synonyms":[{"name":"glycerol rich medium","type":"broad"},{"name":"glycerol sole carbon source YE","type":"related"},{"name":"glycerol sole carbon source rich medium","type":"exact"},{"name":"non-fermentable glycerol sole carbon source rich medium","type":"exact"},{"name":"nonfermentable glycerol sole carbon source rich medium","type":"related"}],"termid":"FYECO:0000138"}


id: PBO:0060484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 6","termid":"PBO:0060484"}


id: FYPO:0000797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tert-butyl hydroperoxide (TBHP or t-BOOH). Cells stop growing (and may die) at a concentration of tert-butyl hydroperoxide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to tert-butyl hydroperoxide","synonyms":[{"name":"hypersensitive to tert-butyl hydroperoxide","type":"exact"},{"name":"sensitive to 2-methyl-prop-2-yl-hydroperoxide","type":"exact"},{"name":"sensitive to TBHP","type":"exact"},{"name":"sensitive to t-BOOH","type":"exact"},{"name":"sensitive to tert-butyl hydroperoxide during mitotic cell cycle","type":"related"},{"name":"sensitive to tert-butyl hydroperoxide during vegetative growth","type":"exact"}],"termid":"FYPO:0000797"}


id: PBO:0069451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 716, pseudogene","termid":"PBO:0069451"}


id: PR:O14016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ure6 gene.","definition_xrefs":["UniProtKB:O14016","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized urease accessory protein UreF-like (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.13","synonyms":[{"name":"Spom972h-ure6","type":"exact"}],"termid":"PR:O14016"}


id: GO:0008140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cAMP response element binding protein (a CREB protein).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor binding","termid":"GO:0140297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cAMP response element binding protein binding","synonyms":[{"name":"3',5' cAMP response element binding protein binding","type":"exact"},{"name":"3',5'-cAMP response element binding protein binding","type":"exact"},{"name":"CBP","type":"related"},{"name":"CREB binding","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate response element binding protein binding","type":"exact"},{"name":"cyclic AMP response element binding protein binding","type":"exact"}],"termid":"GO:0008140"}


id: MONDO:0018258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Angora hair nevus","secondary_identifiers":["Orphanet:370039","UMLS:C4751601","GARD:21590","MEDGEN:1667925"],"synonyms":[{"name":"Schauder syndrome","type":"exact"}],"termid":"MONDO:0018258","xrefs":{"Monarch":{"xref_id":"0018258"}}}


id: GO:0047672
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthranilate + benzoyl-CoA = N-benzoylanthranilate + CoA.","definition_xrefs":["RHEA:21600","EC:2.3.1.144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"anthranilate N-benzoyltransferase activity","secondary_identifiers":["MetaCyc:ANTHRANILATE-N-BENZOYLTRANSFERASE-RXN","KEGG_REACTION:R02453"],"synonyms":[{"name":"benzoyl-CoA:anthranilate N-benzoyltransferase","type":"broad"}],"termid":"GO:0047672"}


id: MONDO:0006139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaplastic changes in the cervical glandular or squamous epithelium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"},{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical metaplasia","secondary_identifiers":["EFO:1000168","UMLS:C0281796","MEDGEN:129096"],"termid":"MONDO:0006139","xrefs":{"Monarch":{"xref_id":"0006139"}}}


id: PBO:0014309
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae MET22","termid":"PBO:0014309"}


id: GO:0021852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a pyramidal neuron precursor from the ventricular zone to the correct layer of the cerebral cortex.","definition_xrefs":["GOC:dgh","PMID:22192824","GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"},{"relation_name":"is_a","term_name":"radial glia-guided pyramidal neuron migration","termid":"GO:0140650"},{"relation_name":"part_of","term_name":"pyramidal neuron development","termid":"GO:0021860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyramidal neuron migration to cerebral cortex","synonyms":[{"name":"projection neuron migration","type":"related"},{"name":"pyramidal neuron migration","type":"broad"}],"termid":"GO:0021852"}


id: PR:Q09765
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A NEDD8-activating enzyme E1 catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00177","PRO:DNx","PANTHER:PTHR10953:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-activating enzyme E1 catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.12c","secondary_identifiers":["UniProtKB:Q09765"],"synonyms":[{"name":"Spom972h-UBA3","type":"exact"},{"name":"ubiquitin-activating enzyme E1 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09765"}


id: GO:0005616
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit protein complex which, in Drosophila, is a heterohexamer of three subunits, alpha, beta and gamma. The complex is thought to store amino acids for synthesis of adult proteins.","definition_xrefs":["PMID:6781759","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"larval serum protein complex","termid":"GO:0005616"}


id: PBO:0061926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily I member 1","termid":"PBO:0061926"}


id: PBO:0044473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 11 subfamily B member 2","termid":"PBO:0044473"}


id: GO:0000807
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The sex chromosome present in both sexes of species in which the female is the heterogametic sex. Two copies of the Z chromosome are present in each somatic cell of males and one copy is present in females.","definition_xrefs":["GOC:mah","GOC:mr","ISBN:0321000382","PMID:20622855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"Z chromosome","secondary_identifiers":["Wikipedia:ZW_sex-determination_system"],"termid":"GO:0000807"}


id: GO:0050455
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 columbamine + O2 = 2 berberine + 2 H2O.","definition_xrefs":["RHEA:23564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"columbamine oxidase activity","secondary_identifiers":["EC:1.21.3.2","KEGG_REACTION:R00044","MetaCyc:COLUMBAMINE-OXIDASE-RXN"],"synonyms":[{"name":"berberine synthase activity","type":"related"},{"name":"columbamine:oxygen oxidoreductase (cyclizing)","type":"related"}],"termid":"GO:0050455"}


id: MONDO:0024348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pityriasis capitis (obsolete MONDO:0024348)","secondary_identifiers":["SCTID:400201008"],"synonyms":[{"name":"pityriasis capitis","type":"exact"}],"termid":"MONDO:0024348","xrefs":{"Monarch":{"xref_id":"0024348"}}}


id: PBO:0065449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 6","termid":"PBO:0065449"}


id: PBO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA 5' exonuclease (predicted)","termid":"PBO:0000802"}


id: PBO:0083175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps origin of replication ARS918, partially overlaps ORF RPB3/YIL021W","termid":"PBO:0083175"}


id: PBO:0077745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of EGR1, exonuclease","termid":"PBO:0077745"}


id: PBO:0048580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 4 pseudogene","termid":"PBO:0048580"}


id: GO:0019293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of phenylalanine to tyrosine.","definition_xrefs":["PMID:4004813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine biosynthetic process","termid":"GO:0006571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tyrosine biosynthetic process, by oxidation of phenylalanine","secondary_identifiers":["MetaCyc:PWY-6134","GO:0019291"],"synonyms":[{"name":"L-tyrosine biosynthesis IV","type":"exact"},{"name":"tyrosine anabolism, by oxidation of phenylalanine","type":"exact"},{"name":"tyrosine formation, by oxidation of phenylalanine","type":"exact"},{"name":"tyrosine synthesis, by oxidation of phenylalanine","type":"exact"}],"termid":"GO:0019293"}


id: PBO:0027299
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_cell_cycle_arrest_phenotype","termid":"PBO:0027299"}


id: GO:0046688
data:
  {"annotated_genes":["SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70627],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010273"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to copper ion","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"copper sensitivity/resistance","type":"related"},{"name":"response to copper","type":"exact"}],"termid":"GO:0046688","terms_by_termid":{"GO:0010273":null}}


id: PBO:0043171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular inhibitor of PP2A","termid":"PBO:0043171"}


id: PBO:0063572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"period circadian regulator 2","termid":"PBO:0063572"}


id: GO:0033610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of oxalate, the organic acid ethanedioate.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxalate metabolic process","termid":"GO:0033609"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"oxalate biosynthetic process","synonyms":[{"name":"ethanedioate biosynthetic process","type":"exact"},{"name":"ethanedioic acid biosynthetic process","type":"exact"},{"name":"oxalate anabolism","type":"exact"},{"name":"oxalate biosynthesis","type":"exact"},{"name":"oxalate formation","type":"exact"},{"name":"oxalate synthesis","type":"exact"},{"name":"oxalic acid biosynthetic process","type":"exact"}],"termid":"GO:0033610"}


id: GO:0046663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a leading edge cell, the dorsal-most cells of the epidermis that migrates during dorsal closure.","definition_xrefs":["PMID:12147138","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leading edge cell differentiation","termid":"GO:0035026"},{"relation_name":"part_of","term_name":"initiation of dorsal closure","termid":"GO:0007392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, leading edge cell differentiation","termid":"GO:0046663"}


id: PBO:0073534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like, endophilin B2","termid":"PBO:0073534"}


id: GO:0035950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of oligopeptide transport, by regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:17005992","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035950)","synonyms":[{"name":"regulation of oligopeptide transport by regulation of transcription from Pol II promoter","type":"exact"}],"termid":"GO:0035950"}


id: PBO:0040970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 41","termid":"PBO:0040970"}


id: PBO:0110361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC2 pseudogene 1","termid":"PBO:0110361"}


id: GO:1905184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of protein serine/threonine phosphatase activity.","definition_xrefs":["PMID:16950131","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein serine/threonine phosphatase activity (obsolete GO:1905184)","synonyms":[{"name":"activation of protein serine/threonine phosphatase activity","type":"narrow"},{"name":"activation of serine/threonine specific protein phosphatase activity","type":"narrow"},{"name":"positive regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"up regulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"up regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"up-regulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"up-regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"upregulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"upregulation of serine/threonine specific protein phosphatase activity","type":"exact"}],"termid":"GO:1905184"}


id: PBO:0000126
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Srb8","termid":"PBO:0000126"}


