# terms

id: MONDO:0014799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the SIPA1L3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 45","secondary_identifiers":["UMLS:C4225182","OMIM:616851","DOID:0110262","MEDGEN:895198"],"synonyms":[{"name":"CTRCT45","type":"exact"},{"name":"SIPA1L3 early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 45","type":"exact"},{"name":"cataract type 45","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in SIPA1L3","type":"exact"}],"termid":"MONDO:0014799","xrefs":{"Monarch":{"xref_id":"0014799"}}}


id: GO:0097222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enzymatic addition of a sequence of 40-60 adenylyl residues at the 3' end of a eukaryotic mitochondrial mRNA primary transcript. Mitochondria contain both stabilizing and destabilizing poly(A) tails.","definition_xrefs":["PMID:18083837","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA processing","termid":"GO:0000963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mitochondrial mRNA polyadenylation","termid":"GO:0097222"}


id: PBO:0012227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit (predicted)","termid":"PBO:0012227"}


id: PBO:0063468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDHA1 pseudogene 1","termid":"PBO:0063468"}


id: GO:0009781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Processes by which a molecule of water is oxidized during photosynthesis. P680+, the photochemically oxidized reaction-center chlorophyll of PSII, is a strong biological oxidant. The reduction potential of P680+ is more positive than that of water, and thus it can oxidize water to give O2 and H+ ions. The oxygen escapes as a gas while the H+ ions remain in solution inside the thylakoid vesicle.","definition_xrefs":["ISBN:0816017360","GOC:jid","ISBN:0716743663"],"gene_count":0,"genotype_count":0,"name":"obsolete photosynthetic water oxidation (obsolete GO:0009781)","synonyms":[{"name":"photosynthetic water oxidation","type":"exact"}],"termid":"GO:0009781"}


id: GO:1990025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Synaptic bouton found in the ventral horn of the spinal cord. F boutons range in diameter from 0.5 to 7 um and contain flattened or pleomorphic synaptic vesicles.","definition_xrefs":["NIF_Subcellular:nlx_subcell_100206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"F bouton","termid":"GO:1990025"}


id: PBO:0052682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 50","termid":"PBO:0052682"}


id: PBO:0081621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 550","termid":"PBO:0081621"}


id: MONDO:0005607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of chronic obstructive pulmonary disease characterized by chronic inflammation in the bronchial tree that results in edema, mucus production, obstruction, and reduced airflow to and from the lung alveoli. The most common cause is tobacco smoking. Signs and symptoms include coughing with excessive mucus production, and shortness of breath.","definition_xrefs":["NCIT:C26722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchitis","termid":"MONDO:0003781"},{"relation_name":"is_a","term_name":"chronic obstructive pulmonary disease","termid":"MONDO:0005002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic bronchitis","secondary_identifiers":["EFO:0006505","ICD9:491.9","MESH:D029481","UMLS:C0008677","icd11.foundation:290835130","SCTID:63480004","ICD9:491","MEDGEN:3084","ICD9:491.8"],"synonyms":[{"name":"bronchitis, chronic","type":"exact"}],"termid":"MONDO:0005607","xrefs":{"Monarch":{"xref_id":"0005607"}}}


id: PBO:0058203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4496","termid":"PBO:0058203"}


id: PATO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An achromatic color of maximum brightness; the color of objects that reflect nearly all light of all visible wavelengths.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"white","synonyms":[{"name":"whitish","type":"related"}],"termid":"PATO:0000323"}


id: PBO:0047182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 200 member C","termid":"PBO:0047182"}


id: MONDO:0035784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with rectovesical fistula (obsolete MONDO:0035784)","secondary_identifiers":["Orphanet:600984"],"termid":"MONDO:0035784","xrefs":{"Monarch":{"xref_id":"0035784"}}}


id: GO:0061608
data:
  {"annotated_genes":["SJAG_03662","SJAG_03693","SJAG_01534","SJAG_03959","SJAG_02425","SJAG_04411","SJAG_00968","SJAG_00840","SJAG_00586","SJAG_01909","SJAG_01789","SJAG_02998","SJAG_03470","SJAG_01083"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70652,72459,72537,73413,73535,74572,76158,77682,93202,93255,96302,102353,114252,117061],"is_not":false,"summary":null,"term":"GO:0061608"}]},"cv_name":"molecular_function","definition":"Combining with a nuclear import signal (NIS) on a cargo to be transported, to mediate transport of the cargo through the nuclear pore, from the cytoplasm to the nuclear lumen. The cargo can be either a RNA or a protein.","definition_xrefs":["Wikipedia:Nuclear_transport","PMID:28713609","GOC:vw","GOC:dph","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic carrier activity","termid":"GO:0140142"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00586":null,"SJAG_00840":null,"SJAG_00968":null,"SJAG_01083":null,"SJAG_01534":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_02425":null,"SJAG_02998":null,"SJAG_03470":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03959":null,"SJAG_04411":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140142"}],"interesting_parent_ids":["GO:0140142","GO:0003674","GO:0140104"],"is_obsolete":false,"name":"nuclear import signal receptor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"importin activity","type":"related"}],"termid":"GO:0061608","terms_by_termid":{"GO:0061608":null}}


id: PBO:0091730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric lncRNA nam6","termid":"PBO:0091730"}


id: PBO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unmerged","termid":"PBO:0002035"}


id: GO:0042691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of crystal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of crystal cell differentiation","termid":"GO:0042689"},{"relation_name":"is_a","term_name":"positive regulation of hemocyte differentiation","termid":"GO:0045612"},{"relation_name":"positively_regulates","term_name":"crystal cell differentiation","termid":"GO:0042688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of crystal cell differentiation","synonyms":[{"name":"activation of crystal cell differentiation","type":"narrow"},{"name":"stimulation of crystal cell differentiation","type":"narrow"},{"name":"up regulation of crystal cell differentiation","type":"exact"},{"name":"up-regulation of crystal cell differentiation","type":"exact"},{"name":"upregulation of crystal cell differentiation","type":"exact"}],"termid":"GO:0042691"}


id: PBO:0116974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADORA1 antisense RNA 2","termid":"PBO:0116974"}


id: GO:0060042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the retina is generated and organized.","definition_xrefs":["GOC:dph","GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina morphogenesis in camera-type eye","synonyms":[{"name":"retina morphogenesis in camera-style eye","type":"exact"},{"name":"retinogenesis","type":"exact"}],"termid":"GO:0060042"}


id: FYPO:0001255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to the level of oxygen is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein level during cellular response to oxygen","synonyms":[{"name":"increased protein accumulation during cellular response to oxygen","type":"related"},{"name":"increased protein level during cellular response to oxygen during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to oxygen during vegetative growth","type":"exact"},{"name":"increased protein level during cellular response to oxygen levels","type":"exact"}],"termid":"FYPO:0001255"}


id: FYPO:0000038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize ethanolamine, and therefore requires ethanolamine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for ethanolamine","synonyms":[{"name":"ethanolamine auxotrophy","type":"exact"},{"name":"growth auxotrophic for ethanolamine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for ethanolamine during vegetative growth","type":"exact"}],"termid":"FYPO:0000038"}


id: PBO:0028361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_polynucleotide_5'-phosphatase_activity","termid":"PBO:0028361"}


id: GO:0061982
data:
  {"annotated_genes":["SJAG_03092","SJAG_03942","SJAG_05220","SJAG_00908","SJAG_03854","SJAG_01863","SJAG_04303","SJAG_01837","SJAG_02731","SJAG_04001","SJAG_05260","SJAG_03680","SJAG_05295","SJAG_03681","SJAG_00377","SJAG_00935","SJAG_00918","SJAG_01832","SJAG_00980","SJAG_01775","SJAG_02814","SJAG_01410","SJAG_01138","SJAG_03720","SJAG_03989","SJAG_02294","SJAG_03673","SJAG_00100","SJAG_03327","SJAG_01419","SJAG_00623","SJAG_02187","SJAG_02616","SJAG_05226","SJAG_02267","SJAG_01620","SJAG_05185","SJAG_01370","SJAG_01224","SJAG_00397","SJAG_00368","SJAG_00757","SJAG_02181","SJAG_04332","SJAG_01662","SJAG_02311","SJAG_02339","SJAG_03437","SJAG_00794","SJAG_02295","SJAG_01263","SJAG_03751","SJAG_00756","SJAG_03525","SJAG_01278","SJAG_02606","SJAG_01076","SJAG_00229","SJAG_02465","SJAG_02771","SJAG_02346","SJAG_00727","SJAG_02286","SJAG_05373","SJAG_05333","SJAG_01371","SJAG_01067","SJAG_00600","SJAG_04623","SJAG_00418","SJAG_04076","SJAG_00113","SJAG_01211","SJAG_05019","SJAG_03073","SJAG_05319","SJAG_01777","SJAG_02561","SJAG_02822","SJAG_02045","SJAG_03685","SJAG_03220","SJAG_04271","SJAG_01601","SJAG_02652","SJAG_02104","SJAG_04457","SJAG_05196","SJAG_03698","SJAG_02708","SJAG_01044","SJAG_01538","SJAG_01156","SJAG_00666","SJAG_04950","SJAG_04748","SJAG_04287","SJAG_00140","SJAG_03926","SJAG_05266","SJAG_04280","SJAG_02556","SJAG_01873","SJAG_07002","SJAG_00364","SJAG_01515","SJAG_02460","SJAG_03217","SJAG_01708","SJAG_00172","SJAG_02490","SJAG_05323","SJAG_01082","SJAG_03221","SJAG_03287","SJAG_03683","SJAG_01805","SJAG_04126","SJAG_03567","SJAG_04143","SJAG_01677","SJAG_03219","SJAG_01330","SJAG_04259","SJAG_03048","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58832],"is_not":false,"summary":null,"term":"GO:0061982"},{"annotations":[107457,88329,98859,116592,88949],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[113735,103051,91638,90787,110843,102759,116737,87546,94999,100529,91179,97374,111196],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030989"},{"annotations":[87601,93590,115329,90076,98420,113571,116855,101134,107616],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[111019,78829,87547,107617,110345],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007129"},{"annotations":[89148,91586,117505,116660],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045143"},{"annotations":[111020,101232,106388],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[89380,116856],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"},{"annotations":[107514,117038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007127"},{"annotations":[114288,106116],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[89550,64382],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[102612,89551,104905,87189,99725],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[115694,98926,101593,114289,113572,113018,93594,101073,104293,107618],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[79077,91265,106523,94541,88953,79087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042138"},{"annotations":[104677,109440,110918,90127,108543],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0010780"},{"annotations":[78352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[110097,107459],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0010772"},{"annotations":[115851,106414,91224],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033315"},{"annotations":[89081,100349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006311"},{"annotations":[100350,96715,110098,88270,116897,107460,101320,78831],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[91555,107547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000710"},{"annotations":[93677,109977],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051755"},{"annotations":[100447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902346"},{"annotations":[110099,98862,107461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000708"},{"annotations":[88271,78825,100351],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0010774"},{"annotations":[96512,115737,117356,117493],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045141"},{"annotations":[113777],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044821"},{"annotations":[98493,99939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[70368,78290],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[73349],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0110032"},{"annotations":[113575],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[102173,108154],"is_not":false,"rel_names":["regulates","positively_regulates","part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[92476,77537,90599,92549,79078,103661,89383,70816,115330,100386,104641,106524,100944,104123,100449,91266,69084],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007131"},{"annotations":[101137],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[116473],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[71487,76660,74139,110121,108878,117094,74697,107943,117243,78976],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[116026],"is_not":false,"rel_names":["part_of","regulates"],"summary":null,"term":"GO:0062209"},{"annotations":[110154,95352,90776,116712,108939,108683,93607,109687,101138,105280,107302,113888,89535,107620,95104,98428,100325,97703,110111,113021,115719,102233,88931],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"A 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id: PBO:0073357
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id: FYPO:0001533
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id: MONDO:0013270
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Rett syndrome, congenital variant (obsolete MONDO:0013270)","termid":"MONDO:0013270","xrefs":{"Monarch":{"xref_id":"0013270"}}}


id: FYPO:0005893
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein found associated with chromatin is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased protein level in chromatin","synonyms":[{"name":"increased protein level at chromatin during vegetative growth","type":"exact"},{"name":"increased protein level in chromatin during mitotic cell cycle","type":"related"},{"name":"increased protein level in chromatin during vegetative growth","type":"exact"},{"name":"protein accumulation in chromatin","type":"exact"}],"termid":"FYPO:0005893"}


id: GO:0042176
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id: GO:0048164
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id: FYPO:0003966
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to salt stress is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during cellular response to salt stress","synonyms":[{"name":"increased protein accumulation during cellular response to salt stress","type":"related"},{"name":"increased protein level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0003966"}


id: PBO:0003400
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducer of sexual development Sds23/Moc1","termid":"PBO:0003400"}


id: GO:0046990
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an N-hydroxyarylamine = CoA + an N-acetoxyarylamine.","definition_xrefs":["EC:2.3.1.118","MetaCyc:2.3.1.118-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"N-hydroxyarylamine O-acetyltransferase activity","secondary_identifiers":["RHEA:20277"],"synonyms":[{"name":"N-hydroxy-2-aminofluorene-O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-hydroxyarylamine O-acetyltransferase activity","type":"related"},{"name":"arylhydroxamate N,O-acetyltransferase activity","type":"related"}],"termid":"GO:0046990"}


id: PBO:0066171
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 4","termid":"PBO:0066171"}


id: GO:0035162
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stages of blood cell formation that take place within the embryo.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic hemopoiesis","synonyms":[{"name":"embryonic haematopoiesis","type":"exact"},{"name":"embryonic haemopoiesis","type":"exact"},{"name":"embryonic hematopoiesis","type":"exact"}],"termid":"GO:0035162"}


id: SO:0002038
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding an shRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shRNA_primary_transcript","synonyms":[{"name":"shRNA primary transcript","type":"exact"}],"termid":"SO:0002038"}


id: GO:0045670
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of osteoclast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoclast differentiation","termid":"GO:0045670"}


id: PBO:0057143
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 222","termid":"PBO:0057143"}


id: MONDO:1011411
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Von Willebrand disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Von Willebrand disease, non-human animal","secondary_identifiers":["OMIA:001056"],"termid":"MONDO:1011411","xrefs":{"Monarch":{"xref_id":"1011411"}}}


id: MONDO:0004994
data:
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Cardiomyopathies may be classified as either primary or secondary, on the basis of etiology, or on the pathophysiology of the lesion: hypertrophic, dilated, or restrictive.","definition_xrefs":["NCIT:C34830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue disorder","termid":"MONDO:0003939"},{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00547":null,"SJAG_00930":null,"SJAG_00993":null,"SJAG_01139":null,"SJAG_01181":null,"SJAG_01209":null,"SJAG_01240":null,"SJAG_01322":null,"SJAG_01665":null,"SJAG_01671":null,"SJAG_01754":null,"SJAG_02131":null,"SJAG_02229":null,"SJAG_02342":null,"SJAG_02431":null,"SJAG_02536":null,"SJAG_02611":null,"SJAG_02785":null,"SJAG_02919":null,"SJAG_02923":null,"SJAG_03077":null,"SJAG_03126":null,"SJAG_03145":null,"SJAG_03453":null,"SJAG_03703":null,"SJAG_03815":null,"SJAG_03824":null,"SJAG_04231":null,"SJAG_04397":null,"SJAG_04553":null,"SJAG_04567":null,"SJAG_04621":null,"SJAG_05199":null,"SJAG_MIT03":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:425.9","MEDGEN:209232","MedDRA:10007636","ICD10CM:I42","Orphanet:167848","SCTID:57809008","MESH:D009202","SCTID:85898001","UMLS:C0878544","DOID:0050700","ICD9:425","icd11.foundation:282225286","ICD9:425.4","EFO:0000318"],"synonyms":[{"name":"Cardiomyopathies","type":"exact"},{"name":"cardiomyopathy","type":"exact"}],"termid":"MONDO:0004994","terms_by_termid":{"MONDO:0008104":null,"MONDO:0008409":null,"MONDO:0008647":null,"MONDO:0008685":null,"MONDO:0009026":null,"MONDO:0009290":null,"MONDO:0009867":null,"MONDO:0010788":null,"MONDO:0010946":null,"MONDO:0011451":null,"MONDO:0012111":null,"MONDO:0012112":null,"MONDO:0012371":null,"MONDO:0012556":null,"MONDO:0012557":null,"MONDO:0012799":null,"MONDO:0012808":null,"MONDO:0013186":null,"MONDO:0013197":null,"MONDO:0013198":null,"MONDO:0013261":null,"MONDO:0013262":null,"MONDO:0013339":null,"MONDO:0013968":null,"MONDO:0014051":null,"MONDO:0014073":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0014667":null,"MONDO:0014668":null,"MONDO:0030300":null,"MONDO:0030330":null,"MONDO:0032592":null,"MONDO:0033669":null,"MONDO:0054588":null,"MONDO:0859358":null,"MONDO:0957545":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0004994"}}}


id: MONDO:0800431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"efavirenz central nervous system toxicity, susceptibility to","secondary_identifiers":["MEDGEN:482783","UMLS:C3281153"],"termid":"MONDO:0800431","xrefs":{"Monarch":{"xref_id":"0800431"}}}


id: PATO:0000642
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being merged with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fused with","synonyms":[{"name":"coalesced","type":"related"},{"name":"fused","type":"exact"},{"name":"fused to","type":"exact"},{"name":"joined with","type":"related"},{"name":"merged with","type":"related"}],"termid":"PATO:0000642"}


id: GO:1905870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 3'-UTR-mediated mRNA stabilization.","definition_xrefs":["PMID:19737525","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of 3'-UTR-mediated mRNA stabilization","termid":"GO:1905868"},{"relation_name":"positively_regulates","term_name":"3'-UTR-mediated mRNA stabilization","termid":"GO:0070935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"positive regulation of 3'-UTR-mediated mRNA stabilization","synonyms":[{"name":"activation of 3'-UTR-mediated mRNA stabilization","type":"narrow"},{"name":"activation of 3'-untranslated region-mediated mRNA stabilization","type":"narrow"},{"name":"positive regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"up regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"up regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"up-regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"up-regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"upregulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"upregulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"}],"termid":"GO:1905870"}


id: PBO:0056036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent transforming growth factor beta binding protein 1","termid":"PBO:0056036"}


id: PBO:0070359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 34","termid":"PBO:0070359"}


id: PBO:0017954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly ACN9 family protein Sdh7 (predicted)","termid":"PBO:0017954"}


id: MONDO:1010516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Jacobsen syndrome that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jacobsen syndrome, non-human animal","termid":"MONDO:1010032"},{"relation_name":"is_a","term_name":"thrombocytopenia, cattle","termid":"MONDO:1010662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jacobsen syndrome, cattle","secondary_identifiers":["OMIA:002558-9913"],"termid":"MONDO:1010516","xrefs":{"Monarch":{"xref_id":"1010516"}}}


id: PBO:0027009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_tethering_at_nuclear_periphery","termid":"PBO:0027009"}


id: PBO:0057872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3180-1","termid":"PBO:0057872"}


id: GO:0071429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains small nuclear RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071429)","synonyms":[{"name":"snRNA-containing RNP export from nucleus","type":"exact"},{"name":"snRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"snRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"snRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071429"}


id: PATO:0002324
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The temporal relation between the end of the process with respect to a reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"offset quality","termid":"PATO:0002324"}


id: GO:1903136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cuprous ion, copper(1+).","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","PMID:24567322","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion binding","termid":"GO:0005507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0046872"],"is_obsolete":false,"name":"cuprous ion binding","synonyms":[{"name":"Cu(+) binding","type":"exact"},{"name":"Cu(I) binding","type":"exact"},{"name":"copper(1+) binding","type":"exact"}],"termid":"GO:1903136"}


id: GO:0071631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a mating pheromone, a peptide hormone that induces a behavioral or physiological response(s) from a responding organism or cell, that positively regulates a conjugation process that results in the union of cellular and genetic information from compatible mating types.","definition_xrefs":["GOC:jh","GOC:elh","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"is_a","term_name":"mating pheromone secretion","termid":"GO:0071834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0000747","GO:0023052"],"is_obsolete":false,"name":"mating pheromone secretion involved in positive regulation of conjugation with cellular fusion","secondary_identifiers":["GO:0071833"],"synonyms":[{"name":"mating-type pheromone secretion involved in conjugation with cellular fusion","type":"exact"},{"name":"peptide pheromone export involved in positive regulation of conjugation with cellular fusion","type":"related"}],"termid":"GO:0071631"}


id: GO:1902267
data:
  {"annotated_genes":["SJAG_04469"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106190],"is_not":false,"summary":null,"term":"GO:1902267"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polyamine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"polyamine transmembrane transport","termid":"GO:1902047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of polyamine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902267","terms_by_termid":{"GO:1902267":null}}


id: GO:0009582
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events in which an (non-living) abiotic stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of abiotic stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perception of abiotic stimulus","type":"related"}],"termid":"GO:0009582","terms_by_termid":{"GO:0050982":null}}


id: MONDO:1010607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exocrine pancreatic insufficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocrine pancreatic insufficiency, non-human animal","termid":"MONDO:1010058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocrine pancreatic insufficiency, dog","secondary_identifiers":["OMIA:000765-9615"],"termid":"MONDO:1010607","xrefs":{"Monarch":{"xref_id":"1010607"}}}


id: PBO:0113485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"This gene is absent from the reference genome, but present in various other strains' genomes; similar to MAL63","termid":"PBO:0113485"}


id: GO:0070713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of an guanosine-cytidine dinucleotide.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dinucleotide insertion","termid":"GO:0070707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA guanosine-cytidine insertion","synonyms":[{"name":"RNA GC insertion","type":"exact"}],"termid":"GO:0070713"}


id: MONDO:0019674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"postaxial polydactyly of fingers","termid":"MONDO:0017426"},{"relation_name":"is_a","term_name":"postaxial polydactyly","termid":"MONDO:0020927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postaxial polydactyly type B","secondary_identifiers":["icd11.foundation:366939273","Orphanet:93335","UMLS:C1868120","MEDGEN:357425","GARD:16818","SCTID:715707008"],"synonyms":[{"name":"PAPB","type":"exact"}],"termid":"MONDO:0019674","xrefs":{"Monarch":{"xref_id":"0019674"}}}


id: PBO:0063704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidoglycan recognition protein 3","termid":"PBO:0063704"}


id: MONDO:0015736
data:
  {"annotated_genes":["SJAG_04887","SJAG_03379","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[84962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012239"},{"annotations":[86521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009725"}]},"cv_name":"mondo","definition":"Intermediate nemaline myopathy is a type of nemaline myopathy (NM) that shows features of typical NM in neonates with a more severe progression.","definition_xrefs":["Orphanet:171433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of alpha-actin","termid":"MONDO:0016193"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of nebulin","termid":"MONDO:0016194"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03145":null,"SJAG_03379":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"intermediate nemaline myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12823","icd11.foundation:1667070006","MEDGEN:1803914","UMLS:C5680452"],"synonyms":[{"name":"Intermediate congenital NM","type":"related"},{"name":"Intermediate congenital nemaline myopathy","type":"related"}],"termid":"MONDO:0015736","terms_by_termid":{"MONDO:0008070":null,"MONDO:0009725":null,"MONDO:0012239":null},"xrefs":{"Monarch":{"xref_id":"0015736"}}}


id: GO:0034265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the cytokinin 6-isopentenyladenine.","definition_xrefs":["GOC:mah","PMID:18216168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin biosynthetic process","termid":"GO:0009691"},{"relation_name":"is_a","term_name":"isopentenyl adenine metabolic process","termid":"GO:0034264"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isopentenyl adenine biosynthetic process","synonyms":[{"name":"isopentenyl adenine anabolism","type":"exact"},{"name":"isopentenyl adenine biosynthesis","type":"exact"},{"name":"isopentenyl adenine formation","type":"exact"},{"name":"isopentenyl adenine synthesis","type":"exact"},{"name":"isopentenyladenine biosynthetic process","type":"exact"}],"termid":"GO:0034265"}


id: GO:0045042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The conservative import of proteins into the mitochondrial intermembrane space. The entire protein enters the matrix, and then the second targeting sequence directs the protein, presumably bound to a matrix protein, across the inner membrane to the intermembrane space.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into mitochondrial intermembrane space, conservative (obsolete GO:0045042)","synonyms":[{"name":"conservative mitochondrial IMS protein import","type":"exact"},{"name":"conservative mitochondrial intermembrane space protein import","type":"exact"},{"name":"conservative protein transport into mitochondrial IMS","type":"exact"},{"name":"conservative protein transport into mitochondrial intermembrane space","type":"exact"},{"name":"protein import into mitochondrial IMS, conservative","type":"exact"},{"name":"protein import into mitochondrial intermembrane space, conservative","type":"exact"},{"name":"protein transport into mitochondrial IMS, conservative","type":"exact"},{"name":"protein transport into mitochondrial intermembrane space, conservative","type":"exact"}],"termid":"GO:0045042"}


id: GO:0047301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-methyl-2-oxopentanoate + L-valine = 3-methyl-2-oxobutanoate + L-isoleucine.","definition_xrefs":["RHEA:11468","EC:2.6.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"valine-3-methyl-2-oxovalerate transaminase activity","secondary_identifiers":["KEGG_REACTION:R02200","MetaCyc:2.6.1.32-RXN"],"synonyms":[{"name":"L-valine:(S)-3-methyl-2-oxopentanoate aminotransferase activity","type":"related"},{"name":"valine--3-methyl-2-oxovalerate aminotransferase activity","type":"related"},{"name":"valine--isoleucine aminotransferase activity","type":"related"},{"name":"valine--isoleucine transaminase activity","type":"related"},{"name":"valine-2-keto-methylvalerate aminotransferase activity","type":"related"},{"name":"valine-3-methyl-2-oxovalerate aminotransferase activity","type":"exact"}],"termid":"GO:0047301"}


id: PBO:0057138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 219a-1","termid":"PBO:0057138"}


id: PBO:0070843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 22","termid":"PBO:0070843"}


id: GO:1904926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a palmitoleic acid stimulus.","definition_xrefs":["GO_REF:0000071","GOC:mr","PMID:25429233","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to palmitoleic acid","termid":"GO:1904926"}


id: FYPO:0003380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of the first meiotic nuclear division, in which homologous chromosomes are normally paired and segregated from each other, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased frequency of meiosis","termid":"FYPO:0000476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased frequency of meiosis I","synonyms":[{"name":"decreased frequency of first meiotic nuclear division","type":"exact"},{"name":"decreased meiosis I","type":"exact"},{"name":"meiosis I: decreased frequency","type":"exact"},{"name":"reduced frequency of meiosis I","type":"exact"}],"termid":"FYPO:0003380"}


id: PBO:0070104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 18 pseudogene","termid":"PBO:0070104"}


id: PBO:0057361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ae-1","termid":"PBO:0057361"}


id: MONDO:0016365
data:
  {"annotated_genes":["SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[85467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"}]},"cv_name":"mondo","definition":"An instance of primary hyperparathyroidism (disease) that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary hyperparathyroidism","termid":"MONDO:0010837"},{"relation_name":"is_a","term_name":"hereditary hyperparathyroidism","termid":"MONDO:0016166"},{"relation_name":"is_a","term_name":"tumor of parathyroid gland","termid":"MONDO:0021360"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01151":null},"genotype_count":0,"is_obsolete":false,"name":"familial primary hyperparathyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:2837","MEDGEN:543605","Orphanet:2207","icd11.foundation:1186866066","UMLS:C0271846"],"synonyms":[{"name":"hereditary primary hyperparathyroidism (disease)","type":"exact"}],"termid":"MONDO:0016365","terms_by_termid":{"MONDO:0007767":null,"MONDO:0007768":null},"xrefs":{"Monarch":{"xref_id":"0016365"}}}


id: GO:0120070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any stomach fundus smooth muscle contraction.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stomach fundus smooth muscle contraction","termid":"GO:0120068"},{"relation_name":"is_a","term_name":"negative regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904305"},{"relation_name":"negatively_regulates","term_name":"stomach fundus smooth muscle contraction","termid":"GO:0014825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomach fundus smooth muscle contraction","termid":"GO:0120070"}


id: PBO:0002884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin ligase E3 Ptr1","termid":"PBO:0002884"}


id: PBO:0044107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 55","termid":"PBO:0044107"}


id: GO:1903022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands.","definition_xrefs":["GO_REF:0000059","GOC:rb","GOC:TermGenie","PMID:12192046"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands (obsolete GO:1903022)","synonyms":[{"name":"activation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"narrow"},{"name":"up regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"},{"name":"up-regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"},{"name":"upregulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"}],"termid":"GO:1903022"}


id: PBO:0082867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm G; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Smd3p, Sme1p, and Smx3p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm G","termid":"PBO:0082867"}


id: GO:0050837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a selenide-sulfide bond to form the cystine-like L-cysteinyl-L-selenocysteine, as in vertebrate selenopeptide P.","definition_xrefs":["RESID:AA0358"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteinyl-L-selenocysteine (obsolete GO:0050837)","termid":"GO:0050837"}


id: PBO:0026993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_chloroacetaldehyde","termid":"PBO:0026993"}


id: MONDO:0015538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare dendritic cell tumor composed of spindle to ovoid cells with a phenotype that is similar to the Langerhans cells. Patients usually present with cutaneous papules, nodules, and plaques. Systemic symptoms are usually absent. The clinical course is variable.","definition_xrefs":["NCIT:C81767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytic and dendritic cell neoplasm","termid":"MONDO:0006247"},{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"indeterminate dendritic cell tumor","secondary_identifiers":["GARD:20022","MEDGEN:415159","ONCOTREE:IDCT","Orphanet:158019","SCTID:721313009","UMLS:C2825741"],"synonyms":[{"name":"IDCT","type":"related"},{"name":"indeterminate Dendritic cell tumor","type":"exact"},{"name":"indeterminate Dendritic cell tumour","type":"exact"},{"name":"indeterminate cell histiocytosis","type":"exact"},{"name":"indeterminate dendritic cell tumor","type":"exact"}],"termid":"MONDO:0015538","xrefs":{"Monarch":{"xref_id":"0015538"}}}


id: GO:0032243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"},{"relation_name":"negatively_regulates","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of nucleoside transport","synonyms":[{"name":"down regulation of nucleoside transport","type":"exact"},{"name":"down-regulation of nucleoside transport","type":"exact"},{"name":"downregulation of nucleoside transport","type":"exact"},{"name":"inhibition of nucleoside transport","type":"narrow"}],"termid":"GO:0032243"}


id: MONDO:0000397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of cerebral palsy caused by damage to cerebellar structures.","definition_xrefs":["Wikipedia:Ataxic_cerebral_palsy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral palsy","termid":"MONDO:0006497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxic cerebral palsy","secondary_identifiers":["icd11.foundation:1134558601","ICD9:343.8","MEDGEN:95998","NCIT:C97168","UMLS:C0394005","SCTID:278512001","DOID:0050670"],"termid":"MONDO:0000397","xrefs":{"Monarch":{"xref_id":"0000397"}}}


id: GO:0004856
data:
  {"annotated_genes":["SJAG_04276"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76898],"is_not":false,"summary":null,"term":"GO:0004856"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylulose + ATP = D-xylulose 5-phosphate + ADP + H+.","definition_xrefs":["RHEA:10964","EC:2.7.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-xylulokinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5662466","KEGG_REACTION:R01639","MetaCyc:XYLULOKIN-RXN"],"synonyms":[{"name":"ATP:D-xylulose 5-phosphotransferase activity","type":"related"},{"name":"xylulokinase (phosphorylating)","type":"related"},{"name":"xylulokinase activity","type":"broad"},{"name":"xylulose kinase activity","type":"related"}],"termid":"GO:0004856","terms_by_termid":{"GO:0004856":null}}


id: PBO:0017784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase Cca1 (predicted)","termid":"PBO:0017784"}


id: PBO:0113382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein; upregulated by toxic concentrations of heavy metal ions including Mn2+, Co2+, Ni2+, Cu2+, and Zn2+; mRNA identified as translated by ribosome profiling data; localizes to the cytoplasm, possibly in intracellular membranes; CYSTM (cysteine-rich transmembrane module) family member; partially overlaps dubious ORF YBR056C-B; YBR056W-A has a paralog, YDR034W-B, that arose from the whole genome duplication","termid":"PBO:0113382"}


id: PBO:0087817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (150 kDa); involved in RNA polymerase II transcription initiation","termid":"PBO:0087817"}


id: MONDO:1012782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive retinal atrophy that occurs in the Whippet breed of dog.","definition_xrefs":["OMIA:002085-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, Whippet, dog","synonyms":[{"name":"retinal atrophy, progressive, Whippet, dog","type":"exact"}],"termid":"MONDO:1012782","xrefs":{"Monarch":{"xref_id":"1012782"}}}


id: PR:Q9UUD2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prp38 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUD2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor 38 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.08","synonyms":[{"name":"Spom972h-prp38","type":"exact"}],"termid":"PR:Q9UUD2"}


id: MONDO:0018852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achromatopsia (ACHM) is a rare autosomal recessive retinal disorder characterized by color blindness, nystagmus, photophobia, and severely reduced visual acuity due to the absence or impairment of cone function.","definition_xrefs":["Orphanet:49382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color vision disorder","termid":"MONDO:0001703"},{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"achromatopsia","secondary_identifiers":["DOID:13911","MedDRA:10000454","GARD:15015","NCIT:C84528","SCTID:102450007","ICD9:368.54","UMLS:C0152200","MEDGEN:57751","ICD10CM:H53.51"],"synonyms":[{"name":"ACHM","type":"exact"},{"name":"Pingelapese blindness","type":"exact"},{"name":"Rod monochromacy","type":"exact"},{"name":"Rod monochromatism","type":"exact"},{"name":"achromatopsia","type":"exact"},{"name":"complete or incomplete color blindness","type":"exact"},{"name":"complete or incomplete colour blindness","type":"exact"},{"name":"monochromatism","type":"exact"},{"name":"total color blindness","type":"exact"},{"name":"total colour blindness","type":"exact"}],"termid":"MONDO:0018852","xrefs":{"Monarch":{"xref_id":"0018852"}}}


id: GO:0046353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-deoxystreptamine antibiotic + acetyl-CoA = an N(3)-acetyl-2-deoxystreptamine antibiotic + CoA + H+.","definition_xrefs":["RHEA:12665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside N-acetyltransferase activity","termid":"GO:0034069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"aminoglycoside 3-N-acetyltransferase activity","secondary_identifiers":["GO:0016991","EC:2.3.1.81","MetaCyc:AMINOGLYCOSIDE-N3-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"3-N-aminoglycoside acetyltransferase activity","type":"related"},{"name":"3-aminoglycoside acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:2-deoxystreptamine-antibiotic N3-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:gentamicin-C N3-acetyltransferase activity","type":"narrow"},{"name":"aminoglycoside acetyltransferase AAC(3)-1","type":"related"},{"name":"aminoglycoside acetyltransferase AAC(3)-I activity","type":"related"},{"name":"gentamicin 3-N-acetyltransferase activity","type":"narrow"},{"name":"gentamicin acetyltransferase I activity","type":"narrow"},{"name":"gentamicin-(3)-N-acetyltransferase activity","type":"narrow"},{"name":"gentamycin 3-N-acetyltransferase activity","type":"exact"},{"name":"gentamycin acetyltransferase I","type":"related"}],"termid":"GO:0046353"}


id: PBO:0089282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aurora-B kinase Ark1","termid":"PBO:0089282"}


id: PBO:0077660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFRSF10A divergent transcript","termid":"PBO:0077660"}


id: PBO:0088904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial m-AAA protease Yta12","termid":"PBO:0088904"}


id: FYPO:0007198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between centromeres of sister chromatids is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0071962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic sister chromatid cohesion","termid":"FYPO:0002390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic centromeric sister chromatid cohesion","synonyms":[{"name":"normal centromeric sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"normal mitotic centromeric sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal mitotic chromosome cohesion at centromere","type":"exact"},{"name":"normal mitotic sister chromatid cohesion at centromere","type":"exact"},{"name":"normal sister chromatid cohesion at centromere during mitosis","type":"exact"}],"termid":"FYPO:0007198"}


id: PBO:0084369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid phosphate phosphatase; catalyzes Mg(2+)-independent dephosphorylation of phosphatidic acid (PA), lysophosphatidic acid, and diacylglycerol pyrophosphate; involved in control of the cellular levels of phosphatidylinositol and PA","termid":"PBO:0084369"}


id: GO:0102126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + coniferyl aldehyde + NADPH + O2 = 5-hydroxy-coniferaldehyde + NADP + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"coniferyl aldehyde 5-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-1142"],"termid":"GO:0102126"}


id: GO:0031787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a H9 melatonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin receptor binding","termid":"GO:0031784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"H9 melatonin receptor binding","synonyms":[{"name":"H9 melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031787"}


id: PBO:0028382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization_during_G0","termid":"PBO:0028382"}


id: PBO:0046288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 5","termid":"PBO:0046288"}


id: PBO:0065878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB29, member RAS oncogene family","termid":"PBO:0065878"}


id: GO:1900841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of helvolic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of helvolic acid biosynthetic process","termid":"GO:1900840"},{"relation_name":"negatively_regulates","term_name":"helvolic acid biosynthetic process","termid":"GO:1900812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"negative regulation of helvolic acid biosynthetic process","synonyms":[{"name":"down regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"down-regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"downregulation of helvolic acid biosynthetic process","type":"exact"}],"termid":"GO:1900841"}


id: PBO:0046097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B","termid":"PBO:0046097"}


id: PBO:0086702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; may be involved in the uptake of chloride ions; does not appear to be involved in monocarboxylic acid transport; green fluorescent protein (GFP)-fusion protein localizes to the vacuole","termid":"PBO:0086702"}


id: GO:0017052
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin-like growth factor binding protein (obsolete GO:0017052)","synonyms":[{"name":"insulin-like growth factor binding protein","type":"exact"}],"termid":"GO:0017052"}


id: FYPO:0001731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular glutamate level","termid":"FYPO:0001568"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased vacuolar glutamate level","synonyms":[{"name":"increased level of glutamate in vacuole","type":"exact"},{"name":"increased vacuolar L-glutamate level","type":"exact"},{"name":"increased vacuolar glutamate level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar glutamate level during vegetative growth","type":"exact"},{"name":"increased vacuolar glutamic acid level","type":"related"}],"termid":"FYPO:0001731"}


id: GO:0009581
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events in which an external stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of external stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perception of external stimulus","type":"related"}],"termid":"GO:0009581","terms_by_termid":{"GO:0050982":null}}


id: PATO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality inhering in a bearer by virtue of the bearer's having odour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odor","termid":"PATO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorous","termid":"PATO:0001331"}


id: PBO:0082747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; required for expression of mid-late sporulation-specific genes; contains two essential bromodomains, a bromo-adjacent homology (BAH) domain, and an AT hook; RSC1 has a paralog, RSC2, that arose from the whole genome duplication","termid":"PBO:0082747"}


id: PBO:0075073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 123","termid":"PBO:0075073"}


id: MONDO:0011499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Okamoto syndrome (obsolete MONDO:0011499)","termid":"MONDO:0011499","xrefs":{"Monarch":{"xref_id":"0011499"}}}


id: PBO:0090516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxy-acid dehydratase Ilv3","termid":"PBO:0090516"}


id: PBO:0004246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit Cut14","termid":"PBO:0004246"}


id: PBO:0083283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified gene AVT3","termid":"PBO:0083283"}


id: PBO:0113549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zpr1p co-chaperone; recognizes eEF1A in GTP-bound, pre-hydrolysis conformation, dampens folding complex GTPase activity to drive client release from Zpr1p","termid":"PBO:0113549"}


id: GO:0080115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the tail region of a myosin XI heavy chain.","definition_xrefs":["PMID:18703495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin tail binding","termid":"GO:0032029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008092","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"myosin XI tail binding","termid":"GO:0080115"}


id: PBO:0091209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr","termid":"PBO:0091209"}


id: PBO:0071362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 21","termid":"PBO:0071362"}


id: FYPO:0000049
data:
  {"alleles_by_uniquename":{"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001489"}],"single_locus_phenotype":[{"annotations":[119033],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0008029"},{"annotations":[119082],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"},{"annotations":[119126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001489"},{"annotations":[119381],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a cell is unable to survive under conditions in which wild type cells survive.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell viability","termid":"FYPO:0000004"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_00871":null,"SJAG_04332":null,"SJAG_04464":null,"SJAG_04697":null},"genotype_count":5,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"inviable cell","references_by_uniquename":{"PMID:25866389":null,"PMID:28954740":null,"PMID:36058798":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04464","SJAG_04697","SJAG_04332","SJAG_00409"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","gpd1delta","gms1delta"],"synonyms":[{"name":"lethal in cell","type":"exact"}],"termid":"FYPO:0000049","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYPO:0001489":null,"FYPO:0003976":null,"FYPO:0007701":null,"FYPO:0008029":null,"FYPO_EXT:0000001":null}}


id: MONDO:1012171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscle contracture and chondrodysplasia, non-human animal","termid":"MONDO:1011947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscle contracture and chondrodysplasia, cattle","secondary_identifiers":["OMIA:000675-9913"],"termid":"MONDO:1012171","xrefs":{"Monarch":{"xref_id":"1012171"}}}


id: GO:0061301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the vasculature of the cerebellum is generated and organized.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"},{"relation_name":"part_of","term_name":"cerebellum vasculature development","termid":"GO:0061300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum vasculature morphogenesis","termid":"GO:0061301"}


id: PBO:0109384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 15","termid":"PBO:0109384"}


id: GO:1901268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cephalosporin C.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cephalosporin biosynthetic process","termid":"GO:0043646"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"cephalosporin C metabolic process","termid":"GO:1901266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cephalosporin C biosynthetic process","synonyms":[{"name":"cephalosporin C anabolism","type":"exact"},{"name":"cephalosporin C biosynthesis","type":"exact"},{"name":"cephalosporin C formation","type":"exact"},{"name":"cephalosporin C synthesis","type":"exact"}],"termid":"GO:1901268"}


id: GO:0048687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of sprouting of an injured axon.","definition_xrefs":["GOC:dph","GOC:lm","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of axon regeneration","termid":"GO:0048680"},{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"positively_regulates","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sprouting of injured axon","synonyms":[{"name":"activation of sprouting of injured axon","type":"narrow"},{"name":"stimulation of sprouting of injured axon","type":"narrow"},{"name":"up regulation of sprouting of injured axon","type":"exact"},{"name":"up-regulation of sprouting of injured axon","type":"exact"},{"name":"upregulation of sprouting of injured axon","type":"exact"}],"termid":"GO:0048687"}


id: PBO:0002680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc14-related protein phosphatase Clp1/Flp1","termid":"PBO:0002680"}


id: PATO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"To bent or hang downwards.","definition_xrefs":["thefreedictionary.:thefreedictionary."],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drooping","synonyms":[{"name":"sagging","type":"exact"}],"termid":"PATO:0002165"}


id: GO:1902840
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nuclear migration along microtubule.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of nuclear migration along microtubule","termid":"GO:1902838"},{"relation_name":"positively_regulates","term_name":"nuclear migration along microtubule","termid":"GO:0030473"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of nuclear migration along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of microtubule cytoskeleton-dependent nuclear positioning","type":"narrow"},{"name":"activation of microtubule cytoskeleton-dependent nucleus positioning","type":"narrow"},{"name":"activation of microtubule-dependent nuclear positioning","type":"narrow"},{"name":"activation of microtubule-dependent nucleus positioning","type":"narrow"},{"name":"activation of microtubule-mediated nuclear migration","type":"narrow"},{"name":"activation of nuclear migration along microtubule","type":"narrow"},{"name":"activation of nuclear migration, microtubule-mediated","type":"narrow"},{"name":"activation of transport of nucleus by microtubules","type":"narrow"},{"name":"activation of transport of nucleus, microtubule-mediated","type":"narrow"},{"name":"positive regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"positive regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"positive regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"positive regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"positive regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"positive regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"positive regulation of transport of nucleus by microtubules","type":"exact"},{"name":"positive regulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"up regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"up regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"up regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"up regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"up regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"up regulation of nuclear migration along microtubule","type":"exact"},{"name":"up regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"up regulation of transport of nucleus by microtubules","type":"exact"},{"name":"up regulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"up-regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"up-regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"up-regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"up-regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"up-regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"up-regulation of nuclear migration along microtubule","type":"exact"},{"name":"up-regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"up-regulation of transport of nucleus by microtubules","type":"exact"},{"name":"up-regulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"upregulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"upregulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"upregulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"upregulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"upregulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"upregulation of nuclear migration along microtubule","type":"exact"},{"name":"upregulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"upregulation of transport of nucleus by microtubules","type":"exact"},{"name":"upregulation of transport of nucleus, microtubule-mediated","type":"exact"}],"termid":"GO:1902840","terms_by_termid":{"GO:1902854":null}}


id: PBO:0113162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inefficient homocysteine synthase; catalyzes de novo homocysteine biosynthesis; capable of catalyzing same reaction as Met17p; affects S-methylmethionine metabolism; similar to Str2p, which is a cystathionine gamma-synthase important in sulfur metabolism; HSU1 is not an essential gene","termid":"PBO:0113162"}


id: MONDO:0000369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extrapulmonary tuberculosis that is located in gastrointestinal tract, located in peritoneum, located in omentum, located in mesentery, located in liver, located in spleen or located in pancreas.","definition_xrefs":["DOID:0050599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrapulmonary tuberculosis","termid":"MONDO:0000368"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abdominal tuberculosis","secondary_identifiers":["SCTID:447330002","MEDGEN:677012","UMLS:C0740652","ICD9:014.80"],"synonyms":[{"name":"tuberculosis of abdomen","type":"exact"}],"termid":"MONDO:0000369","xrefs":{"Monarch":{"xref_id":"0000369"}}}


id: PBO:0027910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_mitotic_S_phase","termid":"PBO:0027910"}


id: PBO:0003228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vid27 family protein","termid":"PBO:0003228"}


id: PBO:0060103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 4","termid":"PBO:0060103"}


id: MONDO:0011699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 16p.","definition_xrefs":["PMID:11752413","DOID:0110904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 8","secondary_identifiers":["MEDGEN:335753","OMIM:606668","MESH:C564682","UMLS:C1847719"],"synonyms":[{"name":"IBD8","type":"exact"},{"name":"inflammatory bowel disease 8","type":"exact"},{"name":"inflammatory bowel disease type 8","type":"exact"}],"termid":"MONDO:0011699","xrefs":{"Monarch":{"xref_id":"0011699"}}}


id: MONDO:0012347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hamartoma, Precalcaneal congenital fibrolipomatous","secondary_identifiers":["OMIM:609808","UMLS:C1853298","MEDGEN:342846","MESH:C565226"],"synonyms":[{"name":"Pcfh","type":"related"},{"name":"hamartoma, Precalcaneal congenital fibrolipomatous","type":"exact"}],"termid":"MONDO:0012347","xrefs":{"Monarch":{"xref_id":"0012347"}}}


id: PBO:0110805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription repressor Scr1, glucose sensing","termid":"PBO:0110805"}


id: PBO:0053122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 15","termid":"PBO:0053122"}


id: FYPO:0003211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which secondary cell septum biogenesis is abnormal. Secondary cell septum biogenesis results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of the secondary cell septum during cytokinesis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal secondary cell septum biogenesis","synonyms":[{"name":"abnormal secondary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"abnormal secondary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"abnormal secondary cell septum formation","type":"related"},{"name":"abnormal secondary cell septum synthesis","type":"related"},{"name":"abnormal secondary septum biogenesis","type":"exact"}],"termid":"FYPO:0003211"}


id: PBO:0046777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosin like glycosyltransferase 2 pseudogene 1","termid":"PBO:0046777"}


id: PBO:0090033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/mRNA dihydrouridine synthase Dus2","termid":"PBO:0090033"}


id: PBO:0014286
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe cyclin C Homology","termid":"PBO:0014286"}


id: FYPO:0005365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which kinetochore sliding, i.e. the movement of a kinetochore along spindle microtubules, during mitotic chromosome recapture does not occur.","definition_xrefs":["PMID:18256284","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000631","FYPO:0000641","FYPO:0001985","FYPO:0000337","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished kinetochore sliding during chromosome recapture","synonyms":[{"name":"abolished chromosome migration during chromosome recapture","type":"exact"},{"name":"abolished chromosome movement during chromosome recapture","type":"exact"},{"name":"abolished kinetochore migration during chromosome recapture","type":"exact"},{"name":"abolished kinetochore sliding along kinetochore microtubule towards spindle pole body during chromosome recapture","type":"exact"},{"name":"abolished kinetochore sliding during chromosome recapture during mitosis","type":"exact"},{"name":"abolished kinetochore sliding during chromosome recapture during vegetative growth","type":"exact"},{"name":"abolished kinetochore sliding during kinetochore retrieval","type":"exact"},{"name":"abolished kinetochore sliding during kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"abolished kinetochore sliding during metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"abolished kinetochore sliding during mitotic metaphase chromosome recapture","type":"exact"},{"name":"abolished kinetochore sliding during sister kinetochore recapture","type":"exact"},{"name":"abolished kinetochore sliding towards SPB during chromosome recapture","type":"exact"},{"name":"abolished kinetochore sliding towards spindle pole body during chromosome recapture","type":"exact"},{"name":"kinetochore sliding during chromosome recapture abolished","type":"exact"}],"termid":"FYPO:0005365"}


id: GO:0098560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the late endosome membrane that faces the cytoplasm.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endosome membrane","termid":"GO:0010009"},{"relation_name":"part_of","term_name":"late endosome membrane","termid":"GO:0031902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005768","GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic side of late endosome membrane","synonyms":[{"name":"external leaflet of late endosome membrane","type":"exact"},{"name":"external side of late endosome membrane","type":"exact"}],"termid":"GO:0098560"}


id: MONDO:0017964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XX disorder of sex development induced by exogenous maternal-derived androgen (obsolete MONDO:0017964)","secondary_identifiers":["Orphanet:325099"],"synonyms":[{"name":"46,XX DSD induced by exogenous maternal-derived androgen","type":"exact"}],"termid":"MONDO:0017964","xrefs":{"Monarch":{"xref_id":"0017964"}}}


id: PBO:0073243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 2","termid":"PBO:0073243"}


id: GO:0033521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytyl diphosphate, (2E)-3,7,11,15-tetramethylhexadec-2-en-1-yl trihydrogen diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"phytyl diphosphate metabolic process","termid":"GO:0033519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phytyl diphosphate biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5063"],"synonyms":[{"name":"phytyl diphosphate anabolism","type":"exact"},{"name":"phytyl diphosphate biosynthesis","type":"exact"},{"name":"phytyl diphosphate formation","type":"exact"},{"name":"phytyl diphosphate synthesis","type":"exact"}],"termid":"GO:0033521"}


id: GO:1904776
data:
  {"annotated_genes":["SJAG_03602","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[98231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell cortex.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17115027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"regulates","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03602":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell cortex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to cell cortex","type":"exact"}],"termid":"GO:1904776","terms_by_termid":{"GO:0120047":null,"GO:0140325":null}}


id: MONDO:0013574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutis laxa - Marfanoid syndrome","secondary_identifiers":["MESH:C563639","GARD:17069","SCTID:254221009","OMIM:614100","Orphanet:171719","icd11.foundation:467492754","MEDGEN:96594","UMLS:C0432335"],"synonyms":[{"name":"cutis laxa - Marfanoid syndrome","type":"exact"},{"name":"cutis laxa, neonatal, with MARFANOID phenotype","type":"related"}],"termid":"MONDO:0013574","xrefs":{"Monarch":{"xref_id":"0013574"}}}


id: PBO:0091702
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YKR002W","termid":"PBO:0091702"}


id: PBO:0018225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, glycerophospholipid-transfer protein (predicted)","termid":"PBO:0018225"}


id: GO:0005968
data:
  {"annotated_genes":["SJAG_02063","SJAG_04434","SJAG_03810"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73571,78669,79111],"is_not":false,"summary":null,"term":"GO:0005968"}]},"cv_name":"cellular_component","definition":"An protein-containing complex which catalyzes of the transfer of a geranyl-geranyl group from geranylgeranyl pyrophosphate to a Rab protein. In mammals it is composed of an alpha and a beta subunit, and associates with an accessory protein Rep (Rab escort protein).","definition_xrefs":["GOC:jl","PMID:11886217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02063":null,"SJAG_03810":null,"SJAG_04434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Rab-protein geranylgeranyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"GGTase-II complex","type":"exact"},{"name":"Rab geranylgeranyltransferase complex","type":"exact"},{"name":"RabGGTase complex","type":"exact"}],"termid":"GO:0005968","terms_by_termid":{"GO:0005968":null}}


id: PBO:0085867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has strong similarity to alanyl-tRNA synthases from Eubacteria; null mutant displays decreased translation rate and increased readthrough of premature stop codons; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YNL040W is not an essential gene","termid":"PBO:0085867"}


id: MONDO:0021390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the ureter.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"},{"relation_name":"is_a","term_name":"ureter neoplasm","termid":"MONDO:0021111"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of ureter","secondary_identifiers":["SCTID:197821004","UMLS:C0346269","ICD9:593.89","NCIT:C4530","MEDGEN:138051","icd11.foundation:134277787"],"synonyms":[{"name":"polyp of the ureter","type":"exact"},{"name":"ureter polyp","type":"exact"},{"name":"ureteral polyp","type":"exact"}],"termid":"MONDO:0021390","xrefs":{"Monarch":{"xref_id":"0021390"}}}


id: PBO:0090543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor EF-1 alpha (eEF1A) methyltransferase Efm4","termid":"PBO:0090543"}


id: PBO:0057451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR570 host gene","termid":"PBO:0057451"}


id: GO:0075053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly by the symbiont of a peg-like structure for the purpose of penetration into its host organism, which penetrates through the host cuticle and epidermal cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:26441323","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration peg formation","secondary_identifiers":["GO:0075057"],"synonyms":[{"name":"formation of symbiont penetration peg for entry into host","type":"related"},{"name":"initiation of symbiont penetration peg","type":"narrow"},{"name":"symbiont penetration peg formation for entry into host","type":"related"},{"name":"symbiont penetration peg initiation","type":"narrow"}],"termid":"GO:0075053"}


id: PBO:0034307
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-electrically_synapsed_to","termid":"PBO:0034307"}


id: MONDO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth resorption","termid":"MONDO:0001670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external pathological resorption","secondary_identifiers":["UMLS:C0266878","DOID:14529","MEDGEN:540236","SCTID:41918006","ICD9:521.42"],"termid":"MONDO:0001988","xrefs":{"Monarch":{"xref_id":"0001988"}}}


id: PBO:0084884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial serine protease; required for the processing of various mitochondrial proteins and maintenance of mitochondrial DNA and morphology; belongs to the rhomboid-GlpG superfamily of intramembrane peptidases","termid":"PBO:0084884"}


id: GO:0007488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the histoblast disc are generated and organized. This includes the transformation of histoblast cells into adult structures during pupal metamorphosis. Histoblast cells are cells founded in the embryo that are the progenitors to the adult abdomen.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"histoblast morphogenesis","synonyms":[{"name":"histoblast metamorphosis","type":"exact"}],"termid":"GO:0007488"}


id: PBO:0116268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; strong preference for dsRNA; remodels RNP structure for efficient transcription termination; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may suppress transcription from cryptic initiation sites; promotes Mex67p-mediated nuclear export of mRNA by facilitating annealing with antisense RNAs to create dsRNAs; binds G-quadruplex (G4) nucleic acids","termid":"PBO:0116268"}


id: PBO:0028528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_rDNA","termid":"PBO:0028528"}


id: PBO:0059484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSRA divergent transcript","termid":"PBO:0059484"}


id: PBO:0045228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C16","termid":"PBO:0045228"}


id: GO:0097056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of selenocysteinyl-tRNA(Sec). This process occurs through the following steps: a unique serine-tRNA with a UGA recognizing anticodon is first aminoacylated with serine; this is then phosphorylated by phosphoseryl-tRNA[Ser]Sec kinase; lastly, selenium is swapped for the phosphate on the serine.","definition_xrefs":["GOC:yaf","PMID:15317934"],"gene_count":0,"genotype_count":0,"name":"obsolete selenocysteinyl-tRNA(Sec) biosynthetic process (obsolete GO:0097056)","synonyms":[{"name":"selenocysteinyl-tRNA(Sec) anabolism","type":"exact"},{"name":"selenocysteinyl-tRNA(Sec) biosynthesis","type":"exact"},{"name":"selenocysteinyl-tRNA(Sec) formation","type":"exact"},{"name":"selenocysteinyl-tRNA(Sec) synthesis","type":"exact"}],"termid":"GO:0097056"}


id: MONDO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare squamous cell carcinoma that arises from the mucosal lining of the trachea. It usually grows as an intraluminal mass and later invades extraluminal structures. The majority of patients present with hemoptysis, coughing, dyspnea, or stridor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trachea carcinoma","termid":"MONDO:0003184"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"trachea squamous cell carcinoma","secondary_identifiers":["NCIT:C4448","SCTID:254620000","DOID:12003","UMLS:C0345946","EFO:1000600","MEDGEN:91059"],"synonyms":[{"name":"epidermoid carcinoma of the trachea","type":"exact"},{"name":"epidermoid carcinoma of trachea","type":"exact"},{"name":"squamous cell carcinoma of the trachea","type":"exact"},{"name":"squamous cell carcinoma of trachea","type":"exact"},{"name":"trachea epidermoid carcinoma","type":"exact"},{"name":"trachea squamous cell carcinoma","type":"exact"},{"name":"tracheal epidermoid carcinoma","type":"exact"},{"name":"tracheal squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0001419","xrefs":{"Monarch":{"xref_id":"0001419"}}}


id: PBO:0034023
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_approved_date","termid":"PBO:0034023"}


id: CL:0002675
data:
  {"annotation_feature_type":"gene","cv_name":"cell","definition":"A S. pombe cell type determined by mat1-Pc and mat1-Pi on the mat1 locus.","definition_xrefs":["GOC:tfm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell","termid":"CL:0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H plus","termid":"CL:0002675"}


id: PBO:0039478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A1","termid":"PBO:0039478"}


id: PR:Q9P3V0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3V0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.03c","synonyms":[{"name":"Spom972h-wtf4","type":"exact"}],"termid":"PR:Q9P3V0"}


id: MONDO:0019558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, autoimmune skin condition that manifests with a red, scaling rash, most often found on the face, ears, and scalp; these lesions often lead to permanent scarring and dyspigmentation. Patients may have lesions with or without other symptoms or antibodies suggestive of systemic lupus erythematosus (SLE).","definition_xrefs":["NCIT:C26820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic cutaneous lupus erythematosus","termid":"MONDO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"discoid lupus erythematosus","secondary_identifiers":["Orphanet:90281","icd11.foundation:2144907708","ICD10CM:L93.0","MEDGEN:1811126","MedDRA:10013072","SCTID:200938002","MESH:D008179","GARD:19131","UMLS:C5574816"],"synonyms":[{"name":"DLE","type":"exact"}],"termid":"MONDO:0019558","xrefs":{"Monarch":{"xref_id":"0019558"}}}


id: GO:0032592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of mitochondrial membrane (obsolete GO:0032592)","synonyms":[{"name":"integral to mitochondrial membrane","type":"narrow"}],"termid":"GO:0032592"}


id: GO:0072347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an anesthetic stimulus. An anesthetic is a substance that causes loss of feeling, awareness, or sensation.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anesthetic","synonyms":[{"name":"response to anaesthetic","type":"exact"}],"termid":"GO:0072347"}


id: PBO:0073631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 16","termid":"PBO:0073631"}


id: MONDO:0003688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized or multifocal mesothelioma arising from the peritoneum and less often the pleura. Cases arising from the peritoneum predominantly occur in women. It is characterized by the formation of papillae, covered by a single layer of blunt mesothelial cells. Mitotic figures are not present. There is no evidence of severe cytologic atypia. It has a relatively favorable clinical outcome, compared to malignant mesothelioma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesothelioma","termid":"MONDO:0005065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"well differentiated papillary mesothelioma","secondary_identifiers":["ICDO:9052/1","MEDGEN:234487","DOID:5884","UMLS:C1337012","NCIT:C7635"],"synonyms":[{"name":"WDPM","type":"exact"},{"name":"benign intermediate mesothelioma","type":"related"},{"name":"benign/Intermediate mesothelioma","type":"exact"},{"name":"well differentiated papillary mesothelioma","type":"exact"},{"name":"well-differentiated mesothelial papillary neoplasm","type":"exact"},{"name":"well-differentiated mesothelial papillary tumor","type":"exact"},{"name":"well-differentiated mesothelial papillary tumour","type":"exact"},{"name":"well-differentiated papillary neoplasm of mesothelium","type":"exact"},{"name":"well-differentiated papillary neoplasm of the mesothelium","type":"exact"},{"name":"well-differentiated papillary tumor of mesothelium","type":"exact"},{"name":"well-differentiated papillary tumor of the mesothelium","type":"exact"},{"name":"well-differentiated papillary tumour of mesothelium","type":"exact"},{"name":"well-differentiated papillary tumour of the mesothelium","type":"exact"}],"termid":"MONDO:0003688","xrefs":{"Monarch":{"xref_id":"0003688"}}}


id: GO:0044443
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a pilus, a proteinaceous hair-like appendage on the surface of bacteria ranging from 2-8 nm in diameter.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pilus part (obsolete GO:0044443)","synonyms":[{"name":"fimbrial part","type":"exact"},{"name":"fimbrium component","type":"exact"},{"name":"pilus component","type":"exact"}],"termid":"GO:0044443"}


id: GO:2000203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ribosomal large subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ribosomal subunit export from nucleus","termid":"GO:2000200"},{"relation_name":"regulates","term_name":"ribosomal large subunit export from nucleus","termid":"GO:0000055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"regulation of ribosomal large subunit export from nucleus","synonyms":[{"name":"regulation of 50S ribosomal subunit export from nucleus","type":"related"},{"name":"regulation of 60S ribosomal subunit export from nucleus","type":"related"},{"name":"regulation of ribosomal large subunit export from cell nucleus","type":"exact"},{"name":"regulation of ribosomal large subunit export out of nucleus","type":"exact"},{"name":"regulation of ribosomal large subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of ribosomal large subunit-nucleus export","type":"exact"}],"termid":"GO:2000203"}


id: MONDO:0009164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, axonal, with necrotizing myopathy, cardiomyopathy, and cataracts","secondary_identifiers":["MEDGEN:341669","MESH:C565596","OMIM:225740","UMLS:C1856990"],"synonyms":[{"name":"Lyon syndrome","type":"related"},{"name":"encephalopathy, axonal, with necrotizing myopathy, cardiomyopathy, and cataracts","type":"exact"}],"termid":"MONDO:0009164","xrefs":{"Monarch":{"xref_id":"0009164"}}}


id: GO:1900142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte apoptotic process.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell apoptotic process","termid":"GO:0034351"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte apoptotic process","termid":"GO:1900141"},{"relation_name":"negatively_regulates","term_name":"oligodendrocyte apoptotic process","termid":"GO:0097252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oligodendrocyte apoptotic process","synonyms":[{"name":"down regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"down regulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"down-regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"down-regulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"downregulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"downregulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"inhibition of oligodendrocyte apoptosis","type":"narrow"},{"name":"inhibition of oligodendrocyte apoptotic process","type":"narrow"},{"name":"negative regulation of oligodendrocyte apoptosis","type":"narrow"}],"termid":"GO:1900142"}


id: GO:0070271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a protein complex. Includes the synthesis of non-protein components, and those protein modifications that are involved in synthesis or assembly of the complex.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein complex biogenesis (obsolete GO:0070271)","synonyms":[{"name":"protein complex biogenesis and assembly","type":"exact"}],"termid":"GO:0070271"}


id: GO:0018636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene + O2 + NADH + H+ = H2O + NAD+ + phenanthrene-9,10-oxide.","definition_xrefs":["PMID:1599252","UM-BBD_reactionID:r0495"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene 9,10-monooxygenase activity (obsolete GO:0018636)","termid":"GO:0018636"}


id: GO:0015889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cobalamin transport","secondary_identifiers":["Reactome:R-HSA-9758881","Reactome:R-HSA-9758890"],"synonyms":[{"name":"vitamin B12 transport","type":"exact"}],"termid":"GO:0015889"}


id: GO:0071969
data:
  {"annotated_genes":["SJAG_00876","SJAG_04483","SJAG_03587","SJAG_02222","SJAG_04666","SJAG_05285","SJAG_04771","SJAG_01288","SJAG_01835","SJAG_00218","SJAG_01290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[70582,74287,91390,112954,115612,75578,105904,72802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[87308,92216],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of fungi.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0034407"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan metabolic process","termid":"GO:0070879"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"fungal-type cell wall (1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall 1,3-beta-D-glucan metabolic process","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan metabolism","type":"exact"},{"name":"fungal-type cell wall beta-1,3 glucan metabolic process","type":"exact"},{"name":"fungal-type cell wall beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0071969","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0140748":null}}


id: PBO:0108953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM69 pseudogene 1","termid":"PBO:0108953"}


id: MONDO:0968981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 124","secondary_identifiers":["MEDGEN:1861039","UMLS:C5935612","OMIM:620794"],"synonyms":[{"name":"deafness, autosomal recessive 124","type":"narrow"}],"termid":"MONDO:0968981","xrefs":{"Monarch":{"xref_id":"0968981"}}}


id: MONDO:0002862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma that involves the bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver sarcoma","termid":"MONDO:0002397"},{"relation_name":"is_a","term_name":"bile duct cancer","termid":"MONDO:0003059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"bile duct sarcoma","secondary_identifiers":["NCIT:C5029","DOID:4064"],"synonyms":[{"name":"bile duct sarcoma","type":"exact"},{"name":"sarcoma of bile duct","type":"exact"},{"name":"sarcoma of the bile duct","type":"exact"}],"termid":"MONDO:0002862","xrefs":{"Monarch":{"xref_id":"0002862"}}}


id: PR:O42667
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssm4 gene.","definition_xrefs":["UniProtKB:O42667","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-associated protein ssm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.13c","synonyms":[{"name":"Spom972h-ssm4","type":"exact"}],"termid":"PR:O42667"}


id: GO:0051176
data:
  {"annotated_genes":["SJAG_03538","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88825,113473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving sulfur or compounds containing sulfur.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"positively_regulates","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sulfur metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of sulfur metabolic process","type":"narrow"},{"name":"positive regulation of sulfur metabolism","type":"exact"},{"name":"positive regulation of sulphur metabolic process","type":"exact"},{"name":"positive regulation of sulphur metabolism","type":"exact"},{"name":"stimulation of sulfur metabolic process","type":"narrow"},{"name":"up regulation of sulfur metabolic process","type":"exact"},{"name":"up-regulation of sulfur metabolic process","type":"exact"},{"name":"upregulation of sulfur metabolic process","type":"exact"}],"termid":"GO:0051176","terms_by_termid":{"GO:0090180":null}}


id: MONDO:0007006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the ulnar nerve from its origin in the brachial plexus to its termination in the hand. Clinical manifestations may include paresis or paralysis of wrist flexion, finger flexion, thumb adduction, finger abduction, and finger adduction. Sensation over the medial palm, fifth finger, and ulnar aspect of the ring finger may also be impaired. Common sites of injury include the axilla, cubital tunnel at the elbow, and Guyon's canal at the wrist. (From Joynt, Clinical Neurology, 1995, Ch51 pp43-5)","definition_xrefs":["MESH:D020424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"ulnar neuropathy","secondary_identifiers":["DOID:4613","EFO:1001224","UMLS:C0154743","MEDGEN:57596","SCTID:359837005"],"synonyms":[{"name":"mononeuropathy of ulnar nerve","type":"exact"},{"name":"ulnar nerve mononeuropathy","type":"exact"},{"name":"ulnar neuropathy","type":"exact"},{"name":"ulnar neuropathy (disorder) [ambiguous]","type":"exact"}],"termid":"MONDO:0007006","xrefs":{"Monarch":{"xref_id":"0007006"}}}


id: GO:0032986
data:
  {"annotated_genes":["SJAG_02314","SJAG_01653","SJAG_04038"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116698,89858,96881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"}]},"cv_name":"biological_process","definition":"The disaggregation of a protein-DNA complex into its constituent components.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"is_a","term_name":"protein-DNA complex organization","termid":"GO:0071824"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01653":null,"SJAG_02314":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA complex disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-protein complex disassembly","type":"exact"}],"termid":"GO:0032986","terms_by_termid":{"GO:0006337":null}}


id: PBO:0068233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 4","termid":"PBO:0068233"}


id: FYPO:0001233
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003751"},{"annotations":[119246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount, distribution, composition or morphology of a cell part is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03250":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal subcellular component","references_by_uniquename":{"PMID:26774782":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03250","SJAG_02763"],"single_locus_genotype_uniquenames":["ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta"],"synonyms":[{"name":"normal subcellular structure","type":"related"}],"termid":"FYPO:0001233","terms_by_termid":{"FYPO:0003751":null,"FYPO:0003780":null}}


id: FYPO:0005848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which H3-K9 specific histone methyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity (H3-K9 specific) activity","termid":"FYPO:0005846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone methyltransferase activity (H3-K9 specific) activity","synonyms":[{"name":"abolished H3-K9 specific histone methyltransferase activity","type":"exact"},{"name":"histone methyltransferase activity (H3-K9 specific) activity abolished","type":"exact"}],"termid":"FYPO:0005848"}


id: PBO:0079185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 14, pseudogene","termid":"PBO:0079185"}


id: PBO:0085646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic progression; mutants are delayed in meiotic nuclear division and are defective in synaptonemal complex assembly; possible membrane-localized protein; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0085646"}


id: PBO:0058103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4318","termid":"PBO:0058103"}


id: GO:0098001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process by which a bacteriophage, using its tail fibers, spikes or a baseplate component, initially recognizes and binds to its specific receptor on the host cell surface. This process is reversible and allows the release of a bacteriophage without affecting infection.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion receptor-mediated virion attachment to host cell","termid":"GO:0098671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor-mediated bacteriophage reversible attachment to host cell","synonyms":[{"name":"phage reversible adsorption","type":"related"},{"name":"reversible bacteriophage attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:0098001"}


id: PBO:0087996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE protein required for retrograde vesicular traffic; involved in Sey1p-independent homotypic ER fusion; required for efficient nuclear fusion during mating; forms a complex with the SNAREs Sec22p, Sec20p and Use1p to mediate fusion of Golgi-derived vesicles at the ER","termid":"PBO:0087996"}


id: PBO:0111131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER MAM associated 1-acylglycerol-3-phosphate acyltransferase Mlg1","termid":"PBO:0111131"}


id: GO:1900392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in regulation of transport.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:17446861"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900392)","termid":"GO:1900392"}


id: PBO:0081347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 155","termid":"PBO:0081347"}


id: SO:0001409
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region which is intended for use in an experiment.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"region","termid":"SO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biomaterial_region","synonyms":[{"name":"biomaterial region","type":"exact"}],"termid":"SO:0001409"}


id: GO:0034561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-bis(4-hydroxyphenyl)-2-propanol = 4,4'-dihydroxy-alpha-methylstilbene + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-bis(4-hydroxyphenyl)-2-proponol dehydratase activity (obsolete GO:0034561)","termid":"GO:0034561"}


id: PBO:0078288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 21-1","termid":"PBO:0078288"}


id: GO:0021920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of neuronal precursors to association neurons in the dorsal spinal cord.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","PMID:12593981"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification (obsolete GO:0021920)","termid":"GO:0021920"}


id: PBO:0036551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary septum 1,6 branched 1,3-beta-glucan synthase catalytic subunit Bgs4","termid":"PBO:0036551"}


id: GO:0032936
data:
  {"annotated_genes":["SJAG_04018","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75374,105641],"is_not":false,"summary":null,"term":"GO:0032936"}]},"cv_name":"cellular_component","definition":"A protein complex formed by the association of sterol regulatory element binding protein (SREBP) and SREBP-cleavage-activating protein (SCAP) in the ER membrane; in the absence of sterols, the SREBP-SCAP complex is packaged into COPII vesicles and travels to the Golgi apparatus to be processed.","definition_xrefs":["PMID:12923525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SREBP-SCAP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Sre1-Scp1 complex","type":"exact"}],"termid":"GO:0032936","terms_by_termid":{"GO:0032936":null}}


id: PATO:0001296
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A scalar optical quality which obtains by the magnitude of the light emitted by the bearer.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optical quality","termid":"PATO:0001300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"luminous flux","termid":"PATO:0001296"}


id: PBO:0044605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 11","termid":"PBO:0044605"}


id: MONDO:0017478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelia of upper limb","termid":"MONDO:0017437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"amelia of upper limb, unilateral","secondary_identifiers":["Orphanet:295053","icd11.foundation:790781203"],"termid":"MONDO:0017478","xrefs":{"Monarch":{"xref_id":"0017478"}}}


id: GO:0098730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The symmetric division of a male germline stem cell to produce two male germline stem cells. An example of this is found in mammalian spermatogonial stem cells, some proportion of which divide symmetrically, so amplifying the population. The choice between asymmetric and symmetric division in this case appears to be internal and stochastic.","definition_xrefs":["GOC:dos","PMID:19948499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell symmetric division","termid":"GO:0098729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germline stem cell symmetric division","termid":"GO:0098730"}


id: MONDO:0016612
data:
  {"annotated_genes":["SJAG_02457","SJAG_01400"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010547"},{"annotations":[85548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010524"}]},"cv_name":"mondo","definition":"X-linked form of cerebellar ataxia.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia","termid":"MONDO:0100310"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01400":null,"SJAG_02457":null},"genotype_count":0,"is_obsolete":false,"name":"X-linked cerebellar ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111828","DOID:0050953","Orphanet:247765","GARD:20665"],"synonyms":[{"name":"X-linked hereditary ataxia","type":"exact"},{"name":"cerebellar ataxia, X-linked","type":"exact"},{"name":"hereditary ataxia, X-linked","type":"exact"}],"termid":"MONDO:0016612","terms_by_termid":{"MONDO:0010524":null,"MONDO:0010547":null},"xrefs":{"Monarch":{"xref_id":"0016612"}}}


id: SO:0000342
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region specifically recognised by a recombinase where recombination can occur during mitosis or meiosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"specific_recombination_site","termid":"SO:0000299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"site_specific_recombination_target_region","synonyms":[{"name":"site specific recombination target region","type":"exact"}],"termid":"SO:0000342"}


id: GO:0099627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during which neurotransmitter receptors, anchored in some region of the synaptic membrane, are recycled via the endosome. This cycle includes release from anchoring, diffusion in the synaptic membrane to an endocytic region, endocytosis, transport to the endosome, recycling in the endosome, transport back the synaptic membrane and subsequent anchoring (trapping).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor transport","termid":"GO:0099637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter receptor cycle","termid":"GO:0099627"}


id: MONDO:0015129
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"}]},"cv_name":"mondo","definition":"A chronic disorder of the adrenal cortex resulting in the inadequate production of glucocorticoid and mineralocorticoid hormones.","definition_xrefs":["Orphanet:101959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenocortical insufficiency","termid":"MONDO:0000004"},{"relation_name":"is_a","term_name":"primary adrenal insufficiency","termid":"MONDO:0015128"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"is_obsolete":false,"name":"chronic primary adrenal insufficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200360","NCIT:C26689","OMIM:240200","NANDO:1200411","SCTID:373662000","UMLS:C0001403","MedDRA:10001130","MEDGEN:1324","DOID:13774","ICD9:255.41","GARD:19803","MESH:D000224","NANDO:2200359"],"synonyms":[{"name":"Addison disease","type":"exact"},{"name":"Addison disease, chronic adrenal insufficiency","type":"exact"},{"name":"Addison's disease","type":"exact"},{"name":"CPAI","type":"exact"},{"name":"adrenal aplasia","type":"related"},{"name":"adrenal gland hypofunction","type":"related"},{"name":"adrenal hypoplasia","type":"related"},{"name":"autoimmune Addison disease","type":"exact"},{"name":"autoimmune adrenalitis","type":"exact"},{"name":"autoimmune primary adrenal insufficiency","type":"narrow"},{"name":"chronic adrenocorticoid insufficiency","type":"exact"},{"name":"classic Addison's disease","type":"exact"},{"name":"hypoadrenocorticism familial","type":"related"},{"name":"hypoadrenocorticism, familial","type":"exact"},{"name":"primary Addison's disease","type":"exact"},{"name":"primary adrenal insufficiency, chronic","type":"exact"},{"name":"primary adrenocortical insufficiency","type":"exact"},{"name":"primary hypoadrenalism","type":"exact"}],"termid":"MONDO:0015129","terms_by_termid":{"MONDO:0013310":null},"xrefs":{"Monarch":{"xref_id":"0015129"}}}


id: GO:0048493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, located in the plasma membrane-derived thylakoid, containing either both large and small subunits or just small subunits. It carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatophore ribulose bisphosphate carboxylase complex","termid":"GO:0048494"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"plasma membrane-derived thylakoid ribulose bisphosphate carboxylase complex","synonyms":[{"name":"RubisCO complex","type":"broad"},{"name":"plasma membrane ribulose bisphosphate carboxylase complex","type":"exact"},{"name":"ribulose bisphosphate carboxylase complex","type":"broad"}],"termid":"GO:0048493"}


id: PBO:0048765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid modulatory element binding protein 1","termid":"PBO:0048765"}


id: PBO:0045892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 4","termid":"PBO:0045892"}


id: MONDO:0019353
data:
  {"annotated_genes":["SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85900,85901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010819"}]},"cv_name":"mondo","definition":"Stargardt disease, also known as Stargardt 1 (STGD1), is an autosomal recessive form of retinal dystrophy that is usually characterized by a progressive loss of central vision associated with irregular macular and perimacular yellow-white fundus flecks, and a so-called ''beaten bronze'' atrophic central macular lesion.","definition_xrefs":["Orphanet:827"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"age-related macular degeneration","termid":"MONDO:0005150"},{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"},{"relation_name":"is_a","term_name":"familial flecked retinopathy","termid":"MONDO:0016420"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Stargardt disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050817","UMLS:C0271093","ICD10CM:H35.5","SCTID:47673003","MedDRA:10062766","icd11.foundation:1690038580","GARD:181","NANDO:1200933","MEDGEN:75734","MESH:D000080362","NCIT:C85078"],"synonyms":[{"name":"Stargardt 1","type":"exact"},{"name":"Stargardt disease 1","type":"narrow"},{"name":"Stargardt macular dystrophy","type":"related"},{"name":"fundus flavimaculatus","type":"exact"},{"name":"juvenile onset macular degeneration","type":"related"}],"termid":"MONDO:0019353","terms_by_termid":{"MONDO:0010819":null},"xrefs":{"Monarch":{"xref_id":"0019353"}}}


id: PBO:0075230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 5","termid":"PBO:0075230"}


id: GO:0005131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a growth hormone receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"hormone receptor binding","termid":"GO:0051427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"growth hormone receptor binding","synonyms":[{"name":"growth hormone","type":"narrow"},{"name":"growth hormone receptor ligand","type":"narrow"}],"termid":"GO:0005131"}


id: PBO:0048014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM and PDZ domain containing 2B, pseudogene","termid":"PBO:0048014"}


id: PBO:0068002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 304","termid":"PBO:0068002"}


id: MONDO:0020115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary polycythemia is an elevated absolute red blood cell mass caused by enhanced stimulation of red blood cell production by an otherwise normal erythroid lineage that may be congenital or acquired (congenital secondary polycythemia and acquired secondary polycythemia).","definition_xrefs":["Orphanet:98428"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic hematologic disease (obsolete MONDO:0015549)","termid":"MONDO:0015549"},{"relation_name":"is_a","term_name":"polycythemia","termid":"MONDO:0005571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"secondary polycythemia","secondary_identifiers":["MedDRA:10036062","MEDGEN:231144","UMLS:C1318533","GARD:19467","NCIT:C27178"],"synonyms":[{"name":"secondary erythrocytosis","type":"exact"},{"name":"secondary polycythemia","type":"exact"}],"termid":"MONDO:0020115","xrefs":{"Monarch":{"xref_id":"0020115"}}}


id: PBO:0068200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 507","termid":"PBO:0068200"}


id: GO:0004377
data:
  {"annotated_genes":["SJAG_00747"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76533],"is_not":false,"summary":null,"term":"GO:0004377"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-D-Man-(1->3)-[alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + 2 GDP-alpha-D-mannose = an alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + 2 GDP + 2 H+. This reaction is the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->2)-D-mannosyl-D-mannose linkage.","definition_xrefs":["EC:2.4.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,2-mannosyltransferase activity","termid":"GO:0000026"},{"relation_name":"is_a","term_name":"glycolipid mannosyltransferase activity","termid":"GO:0004376"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN-5464","RHEA:29523"],"synonyms":[{"name":"GDP-D-mannose:D-Man-alpha-(1->3)-[D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,2-mannosyltransferase activity","type":"related"},{"name":"GDP-mannose-oligosaccharide-lipid mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:glycolipid 1,2-alpha-D-mannosyltransferase activity","type":"related"},{"name":"glycolipid 2-alpha-mannosyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose-oligosaccharide-lipid mannosyltransferase activity","type":"related"},{"name":"oligosaccharide-lipid mannosyltransferase activity","type":"related"}],"termid":"GO:0004377","terms_by_termid":{"GO:0004377":null}}


id: MONDO:0002108
data:
  {"annotated_genes":["SJAG_03453","SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87097,85655,87098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the thyroid gland","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid tumor","termid":"MONDO:0015074"},{"relation_name":"is_a","term_name":"malignant endocrine neoplasm","termid":"MONDO:0021069"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C7510","SCTID:363478007","MEDGEN:2869","DOID:1781","UMLS:C0007115","ICD9:193","NANDO:2200074"],"synonyms":[{"name":"cancer of thyroid gland","type":"exact"},{"name":"malignant neoplasm of the thyroid","type":"exact"},{"name":"malignant neoplasm of the thyroid gland","type":"exact"},{"name":"malignant neoplasm of thyroid","type":"exact"},{"name":"malignant neoplasm of thyroid gland","type":"exact"},{"name":"malignant thyroid gland neoplasm","type":"exact"},{"name":"malignant thyroid gland tumor","type":"exact"},{"name":"malignant thyroid gland tumour","type":"exact"},{"name":"malignant thyroid neoplasm","type":"exact"},{"name":"malignant thyroid tumor","type":"exact"},{"name":"malignant thyroid tumour","type":"exact"},{"name":"malignant tumor of the thyroid","type":"exact"},{"name":"malignant tumor of the thyroid gland","type":"exact"},{"name":"malignant tumor of thyroid","type":"exact"},{"name":"malignant tumor of thyroid gland","type":"exact"},{"name":"malignant tumour of the thyroid","type":"exact"},{"name":"malignant tumour of the thyroid gland","type":"exact"},{"name":"malignant tumour of thyroid","type":"exact"},{"name":"malignant tumour of thyroid gland","type":"exact"},{"name":"neoplasm of thyroid gland","type":"broad"},{"name":"thyroid gland cancer","type":"exact"},{"name":"thyroid gland neoplasm","type":"broad"}],"termid":"MONDO:0002108","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0002108"}}}


id: MONDO:0013675
data:
  {"annotated_genes":["SJAG_01147"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85471],"is_not":false,"summary":null,"term":"MONDO:0013675"}]},"cv_name":"mondo","definition":"Any fatal multiple mitochondrial dysfunctions syndrome in which the cause of the disease is a mutation in the BOLA3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01147":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0004069"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:482008","UMLS:C3280378","DOID:0080134","GARD:17662","OMIM:614299","Orphanet:401874"],"synonyms":[{"name":"BOLA3 deficiency","type":"exact"},{"name":"BOLA3 fatal multiple mitochondrial dysfunctions syndrome","type":"exact"},{"name":"MMDS2","type":"related"},{"name":"fatal multiple mitochondrial dysfunctions syndrome caused by mutation in BOLA3","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 2","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 2 with hyperglycinemia","type":"related"},{"name":"multiple mitochondrial dysfunctions syndrome type 2","type":"exact"}],"termid":"MONDO:0013675","terms_by_termid":{"MONDO:0013675":null},"xrefs":{"Monarch":{"xref_id":"0013675"}}}


id: PBO:0088502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane ABC1 kinase family protein, unknown role, human ADCK2 ortholog","termid":"PBO:0088502"}


id: PBO:0066384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REC8 meiotic recombination protein","termid":"PBO:0066384"}


id: GO:0033941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2)-alpha-D- and (1->6)-alpha-D- linkages in mannan, releasing D-mannose.","definition_xrefs":["EC:3.2.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"mannan exo-1,2-1,6-alpha-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.137-RXN"],"synonyms":[{"name":"1,2-1,6-alpha-D-mannan D-mannohydrolase activity","type":"related"},{"name":"exo-1,2-1,6-alpha-mannosidase activity","type":"related"}],"termid":"GO:0033941"}


id: GO:0017157
data:
  {"annotated_genes":["SJAG_02366","SJAG_04509","SJAG_00661","SJAG_03763"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87691,93643,98199],"is_not":false,"summary":null,"term":"GO:0017157"},{"annotations":[99979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"exocytosis","termid":"GO:0006887"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_02366":null,"SJAG_03763":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of exocytosis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017157","terms_by_termid":{"GO:0017157":null,"GO:0045921":null}}


id: PATO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000733 piloerection value (obsolete PATO:0000733)","termid":"PATO:0000733"}


id: GO:0009988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition between cells. May involve the formation of specialized cell junctions.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell recognition","termid":"GO:0009988"}


id: GO:0060134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a startle magnitude is reduced when the startling stimulus is preceded by a low-intensity prepulse.","definition_xrefs":["PMID:10341260","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"part_of","term_name":"startle response","termid":"GO:0001964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prepulse inhibition","secondary_identifiers":["Wikipedia:Prepulse_inhibition"],"synonyms":[{"name":"PPI","type":"related"},{"name":"pre-pulse inhibition","type":"exact"}],"termid":"GO:0060134"}


id: MONDO:0030314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease (infantile ulcerative colitis) 31, autosomal recessive","secondary_identifiers":["OMIM:619398","UMLS:C5444224","MEDGEN:1783277"],"synonyms":[{"name":"IBD31","type":"exact"},{"name":"inflammatory bowel disease (infantile ulcerative colitis) 31","type":"exact"},{"name":"inflammatory bowel disease (infantile ulcerative colitis) 31, autosomal recessive","type":"exact"},{"name":"inflammatory bowel disease, early-onset, autosomal recessive","type":"related"}],"termid":"MONDO:0030314","xrefs":{"Monarch":{"xref_id":"0030314"}}}


id: GO:0071273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of morphine, 17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol. Morphine is a highly potent opiate analgesic psychoactive drug obtained form the opium poppy, Papaver somniferum.","definition_xrefs":["PMID:22193538","GOC:ecd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphine metabolic process","termid":"GO:0071272"},{"relation_name":"is_a","term_name":"isoquinoline alkaloid catabolic process","termid":"GO:0071274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphine catabolic process","synonyms":[{"name":"morphine breakdown","type":"exact"},{"name":"morphine catabolism","type":"exact"},{"name":"morphine degradation","type":"exact"}],"termid":"GO:0071273"}


id: PBO:0059403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33","termid":"PBO:0059403"}


id: GO:0061434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of replicative cell aging through a mechanism that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a caloric restriction stimulus.","definition_xrefs":["GOC:dph","PMID:17914901"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of replicative cell aging by regulation of transcription from RNA polymerase II promoter in response to caloric restriction (obsolete GO:0061434)","termid":"GO:0061434"}


id: MONDO:0958006
data:
  {"annotated_genes":["SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85882],"is_not":false,"summary":null,"term":"MONDO:0958006"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Guo-Campeau type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620663","UMLS:C5882737","MEDGEN:1844202"],"termid":"MONDO:0958006","terms_by_termid":{"MONDO:0958006":null},"xrefs":{"Monarch":{"xref_id":"0958006"}}}


id: MONDO:0005998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infestation with mites of the genus Trombiculidae, whose larvae carry the rickettsial agent of scrub typhus.","definition_xrefs":["MESH:D014323-modified"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mite infestation","termid":"MONDO:0004389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trombiculiasis","secondary_identifiers":["DOID:8399","MESH:D014323","MEDGEN:11928","UMLS:C0041170"],"synonyms":[{"name":"Trombiculidae caused disease or disorder","type":"exact"},{"name":"Trombiculidae disease or disorder","type":"exact"},{"name":"Trombiculidae infectious disease","type":"exact"}],"termid":"MONDO:0005998","xrefs":{"Monarch":{"xref_id":"0005998"}}}


id: SO:0100011
data:
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id: GO:0085042
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A host-derived membrane surrounding the symbiont arbuscule during symbiosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"periarbuscular membrane","termid":"GO:0085042"}


id: PBO:0029492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_meiosis_II","termid":"PBO:0029492"}


id: MONDO:0019017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome is characterized by bilateral shortening of the fifth fingers and fifth metacarpals. It has been described in several members of one family. Some members of the family also had spherocytosis and insulin resistance. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:66518"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short fifth metacarpals-insulin resistance syndrome","secondary_identifiers":["MEDGEN:929290","UMLS:C4303621","GARD:18868"],"termid":"MONDO:0019017","xrefs":{"Monarch":{"xref_id":"0019017"}}}


id: PBO:0083983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamine-fructose-6-phosphate amidotransferase; catalyzes the formation of glucosamine-6-P and glutamate from fructose-6-P and glutamine in the first step of chitin biosynthesis; GFA1 has a paralogous region, comprising ORFs YMR084W-YMR085W, that arose from the whole genome duplication","termid":"PBO:0083983"}


id: SO:0001548
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that increases transcript stability with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_stability_variant","termid":"SO:0001546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_transcript_stability_variant","synonyms":[{"name":"increased transcript stability variant","type":"exact"}],"termid":"SO:0001548"}


id: PBO:0091594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent aldo-keto reductase","termid":"PBO:0091594"}


id: MONDO:0033662
data:
  {"annotated_genes":["SJAG_03357"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85565],"is_not":false,"summary":null,"term":"MONDO:0033662"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03357":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, seizures, and brain atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18532","MEDGEN:1755716","UMLS:C5436747","OMIM:619076"],"synonyms":[{"name":"NEDMISB","type":"exact"}],"termid":"MONDO:0033662","terms_by_termid":{"MONDO:0033662":null},"xrefs":{"Monarch":{"xref_id":"0033662"}}}


id: MONDO:0008794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anhidrosis","termid":"MONDO:0006527"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"anhidrosis, familial generalized, with abnormal or absent sweat glands","secondary_identifiers":["MEDGEN:895862","UMLS:C4225670","OMIM:206600"],"synonyms":[{"name":"anhidrosis, familial generalized, with abnormal or absent sweat glands","type":"exact"}],"termid":"MONDO:0008794","xrefs":{"Monarch":{"xref_id":"0008794"}}}


id: PBO:0027252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_cells_with_astral_spindle_microtubules","termid":"PBO:0027252"}


id: GO:1990688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a Golgi vesicle to the lipid bilayer membrane of the ERGIC. Such vesicles include COPI-coated transport vesicles involved in retrograde transport.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane","termid":"GO:1990668"},{"relation_name":"part_of","term_name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","termid":"GO:0006890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"Golgi vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane","synonyms":[{"name":"Golgi vesicle fusion with ER-Golgi intermediate compartment membrane","type":"exact"},{"name":"Golgi vesicle fusion with ERGIC membrane","type":"exact"}],"termid":"GO:1990688"}


id: GO:0050819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of coagulation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of coagulation","termid":"GO:0050818"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"coagulation","termid":"GO:0050817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of coagulation","synonyms":[{"name":"anticoagulant activity","type":"related"},{"name":"down regulation of coagulation","type":"exact"},{"name":"down-regulation of coagulation","type":"exact"},{"name":"downregulation of coagulation","type":"exact"},{"name":"inhibition of coagulation","type":"narrow"},{"name":"negative regulation of clotting","type":"exact"}],"termid":"GO:0050819"}


id: FYPO:0001674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of L-aminoadipate-semialdehyde dehydrogenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"abnormal alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0001674"}


id: GO:0008441
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78820],"is_not":false,"summary":null,"term":"GO:0008441"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidase activity","termid":"GO:0008252"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-176606","Reactome:R-HSA-8953499","RHEA:10040","MetaCyc:325-BISPHOSPHATE-NUCLEOTIDASE-RXN"],"synonyms":[{"name":"3'(2'),5' bisphosphate nucleotidase activity","type":"exact"},{"name":"3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate 3'-phosphatase activity","type":"related"},{"name":"DPNPase activity","type":"related"},{"name":"adenosine-3'(2'),5'-bisphosphate 3'(2')-phosphohydrolase activity","type":"related"},{"name":"phosphoadenylate 3'-nucleotidase activity","type":"related"}],"termid":"GO:0008441","terms_by_termid":{"GO:0008441":null}}


id: GO:1902832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation in dorsal spinal cord.","definition_xrefs":["PMID:21730158","GO_REF:0000058","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation in dorsal spinal cord","termid":"GO:0021921"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"cell proliferation in dorsal spinal cord","termid":"GO:0010456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation in dorsal spinal cord","synonyms":[{"name":"down regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"down-regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"downregulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"inhibition of cell proliferation in dorsal spinal cord","type":"narrow"}],"termid":"GO:1902832"}


id: GO:0005728
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Circular DNA molecules encoding ribosomal RNA that are replicated independently of chromosomal replication. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats.","definition_xrefs":["PMID:12044934","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrachromosomal circular DNA","termid":"GO:0005727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal rDNA circle","synonyms":[{"name":"extrachromosomal ribosomal DNA circle","type":"exact"}],"termid":"GO:0005728"}


id: PBO:0084620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine aminopeptidase; catalyzes the cotranslational removal of N-terminal methionine from nascent polypeptides; function is partially redundant with that of Map2p","termid":"PBO:0084620"}


id: MONDO:1010294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rheumatoid arthritis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatoid arthritis, non-human animal","secondary_identifiers":["OMIA:000067"],"termid":"MONDO:1010294","xrefs":{"Monarch":{"xref_id":"1010294"}}}


id: PBO:0076374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1 (MAP3K7) binding protein 2","termid":"PBO:0076374"}


id: GO:0030410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 S-adenosyl-L-methionine(1+) = 3 S-methyl-5'-thioadenosine + 3 H+ + nicotianamine.","definition_xrefs":["RHEA:16481","EC:2.5.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"nicotianamine synthase activity","secondary_identifiers":["KEGG_REACTION:R00075","MetaCyc:2.5.1.43-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-L-methionine 3-amino-3-carboxypropyltransferase activity","type":"related"}],"termid":"GO:0030410"}


id: MONDO:0030323
data:
  {"annotated_genes":["SJAG_00645"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86132],"is_not":false,"summary":null,"term":"MONDO:0030323"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 31","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5543627","DOID:0070412","MEDGEN:1786855","OMIM:619422"],"synonyms":[{"name":"SCAR31","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 31","type":"exact"}],"termid":"MONDO:0030323","terms_by_termid":{"MONDO:0030323":null},"xrefs":{"Monarch":{"xref_id":"0030323"}}}


id: PBO:0046147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIPR1 intronic transcript 1","termid":"PBO:0046147"}


id: GO:0051444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ubiquitin transferase activity.","definition_xrefs":["GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein ubiquitination","termid":"GO:0031397"},{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-protein transferase activity","termid":"GO:0051438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ubiquitin-protein transferase activity","synonyms":[{"name":"APC inhibition","type":"narrow"},{"name":"APC inhibitor","type":"narrow"},{"name":"SCF complex inhibitor","type":"narrow"},{"name":"anaphase promoting complex inhibition","type":"narrow"},{"name":"anaphase promoting complex inhibitor","type":"narrow"},{"name":"anaphase-promoting complex inhibition","type":"narrow"},{"name":"anaphase-promoting complex inhibitor","type":"narrow"},{"name":"down regulation of ubiquitin transferase activity","type":"exact"},{"name":"down-regulation of ubiquitin transferase activity","type":"exact"},{"name":"downregulation of ubiquitin transferase activity","type":"exact"},{"name":"inhibition of ubiquitin transferase activity","type":"narrow"},{"name":"negative regulation of ubiquitin transferase activity","type":"exact"},{"name":"ubiquitin transferase inhibitor","type":"narrow"}],"termid":"GO:0051444"}


id: FYPO:0005847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of H3-K9 specific histone methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone methyltransferase activity","termid":"FYPO:0004784"},{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity (H3-K9 specific) activity","termid":"FYPO:0005846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased histone methyltransferase activity (H3-K9 specific) activity","synonyms":[{"name":"decreased H3-K9 specific histone methyltransferase activity","type":"exact"},{"name":"reduced histone methyltransferase activity (H3-K9 specific) activity","type":"exact"}],"termid":"FYPO:0005847"}


id: PBO:0049306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase omega 1","termid":"PBO:0049306"}


id: PBO:0011491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0011491"}


id: PBO:0050276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box containing 3","termid":"PBO:0050276"}


id: FYPO:0000193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which a cellular response to osmotic stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cellular response to osmotic stress","synonyms":[{"name":"abnormal cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000193"}


id: PBO:0087789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; nuclear protein required for S- and M-phase cyclin degradation and mitotic control; involved in proteolysis mediated by the anaphase-promoting complex cyclosome (APCC)","termid":"PBO:0087789"}


id: GO:0061501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GTP = 2 diphosphate + cyclic G-P(2'-5')A-P(3'-5') (cyclic 2',3' GAMP).","definition_xrefs":["PMID:23258413","RHEA:42064","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic GMP-AMP synthase activity","termid":"GO:0140699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"2',3'-cyclic GMP-AMP synthase activity","secondary_identifiers":["Reactome:R-HSA-3244614","EC:2.7.7.86"],"synonyms":[{"name":"2',3' cyclic GMP-AMP synthase activity","type":"exact"},{"name":"2',3' cyclic-GMP-AMP synthase activity","type":"exact"},{"name":"cyclic 2',3' GAMP synthase activity","type":"exact"},{"name":"cyclic-GMP-AMP synthase activity","type":"broad"}],"termid":"GO:0061501"}


id: MONDO:0017097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated focal cortical dysplasia type I","termid":"MONDO:0017095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated focal cortical dysplasia type Ib","secondary_identifiers":["UMLS:C5679765","GARD:20985","Orphanet:268980","NANDO:1200566","MEDGEN:1842666"],"synonyms":[{"name":"FCD type IB","type":"exact"}],"termid":"MONDO:0017097","xrefs":{"Monarch":{"xref_id":"0017097"}}}


id: PATO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer resembling wood.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/ligneous"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligneous","termid":"PATO:0002348"}


id: PBO:0005528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Svf1 family protein Svf1","termid":"PBO:0005528"}


id: PBO:0005205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase (predicted)","termid":"PBO:0005205"}


id: PBO:0034699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocytic docking protein Mso1","termid":"PBO:0034699"}


id: PBO:0042914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFLAR antisense RNA 1","termid":"PBO:0042914"}


id: GO:0008513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of organic cations from one side of a membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"secondary active organic cation transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-549241","GO:0015354"],"synonyms":[{"name":"organic cation porter activity","type":"related"},{"name":"polyspecific organic cation transmembrane transporter activity","type":"narrow"}],"termid":"GO:0008513"}


id: MONDO:0021509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the myocardium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of myocardium","termid":"MONDO:0021380"},{"relation_name":"is_a","term_name":"benign neoplasm of heart","termid":"MONDO:0021450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"benign neoplasm of myocardium","secondary_identifiers":["NCIT:C4607","icd11.foundation:2097885721","MEDGEN:83862","SCTID:92238001","UMLS:C0347253"],"synonyms":[{"name":"benign myocardial neoplasm","type":"exact"},{"name":"benign myocardial tumor","type":"exact"},{"name":"benign myocardial tumour","type":"exact"},{"name":"benign neoplasm of the myocardium","type":"exact"},{"name":"benign tumor of myocardium","type":"exact"},{"name":"benign tumor of the myocardium","type":"exact"},{"name":"benign tumour of myocardium","type":"exact"},{"name":"benign tumour of the myocardium","type":"exact"},{"name":"myocardium benign neoplasm","type":"exact"}],"termid":"MONDO:0021509","xrefs":{"Monarch":{"xref_id":"0021509"}}}


id: FYPO:0004595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which gamma-tubulin complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal gamma-tubulin complex assembly","synonyms":[{"name":"abnormal gamma-tubulin complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal gamma-tubulin complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0004595"}


id: GO:0006081
data:
  {"annotated_genes":["SJAG_04404","SJAG_00281","SJAG_00501","SJAG_04726","SJAG_01383","SJAG_02960","SJAG_00252","SJAG_04263","SJAG_03174","SJAG_04674","SJAG_00691","SJAG_00283","SJAG_02988","SJAG_01881","SJAG_03934","SJAG_01432","SJAG_01543","SJAG_00707","SJAG_04192","SJAG_01457","SJAG_05256","SJAG_00070","SJAG_02106","SJAG_01596"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[77950,95326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"},{"annotations":[71788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046166"},{"annotations":[72985,71421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903189"},{"annotations":[100829,104890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"},{"annotations":[102588,74259,60860,72523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[60859,59076,104850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"},{"annotations":[108225,74298,73580,104149,72896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009052"},{"annotations":[77957,74995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[114180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[75308,64007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[111619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00252":null,"SJAG_00281":null,"SJAG_00283":null,"SJAG_00501":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01432":null,"SJAG_01457":null,"SJAG_01543":null,"SJAG_01596":null,"SJAG_01881":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_03174":null,"SJAG_03934":null,"SJAG_04192":null,"SJAG_04263":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aldehyde metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"aldehyde metabolism","type":"exact"},{"name":"alkanal metabolic process","type":"exact"},{"name":"alkanal metabolism","type":"exact"}],"termid":"GO:0006081","terms_by_termid":{"GO:0009052":null,"GO:0009436":null,"GO:0009443":null,"GO:0010144":null,"GO:0019243":null,"GO:0036001":null,"GO:0042821":null,"GO:0042823":null,"GO:0046166":null,"GO:0046294":null,"GO:0061727":null,"GO:1903189":null}}


id: PBO:0078775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-7","termid":"PBO:0078775"}


id: GO:0140836
data:
  {"annotated_genes":["SJAG_00150","SJAG_00342"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94137,105853],"is_not":false,"summary":null,"term":"GO:0140836"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) = ADP + H+ + RNA polymerase II large subunit phosphoserine (position 5).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat kinase activity","termid":"GO:0008353"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0140096","GO:0016740","GO:0003824","GO:0003674","GO:0004672"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat S5 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II C-terminal domain S5 kinase activity","type":"exact"}],"termid":"GO:0140836","terms_by_termid":{"GO:0140836":null}}


id: PBO:0053006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal associated membrane protein 1 pseudogene 1","termid":"PBO:0053006"}


id: MONDO:0025667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"limbal stem cell deficiency","secondary_identifiers":["UMLS:C1561989","Orphanet:171673","GARD:20123","MEDGEN:295775"],"termid":"MONDO:0025667","xrefs":{"Monarch":{"xref_id":"0025667"}}}


id: GO:1903919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of actin filament severing.","definition_xrefs":["GOC:TermGenie","GOC:als","GO_REF:0000058","PMID:23325791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of actin filament severing","termid":"GO:1903918"},{"relation_name":"negatively_regulates","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin filament severing","synonyms":[{"name":"down regulation of F-actin severing","type":"exact"},{"name":"down regulation of actin filament severing","type":"exact"},{"name":"down regulation of actin filament severing activity","type":"related"},{"name":"down regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"down-regulation of F-actin severing","type":"exact"},{"name":"down-regulation of actin filament severing","type":"exact"},{"name":"down-regulation of actin filament severing activity","type":"related"},{"name":"down-regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"downregulation of F-actin severing","type":"exact"},{"name":"downregulation of actin filament severing","type":"exact"},{"name":"downregulation of actin filament severing activity","type":"related"},{"name":"downregulation of barbed-end actin capping/severing activity","type":"related"},{"name":"inhibition of F-actin severing","type":"narrow"},{"name":"inhibition of actin filament severing","type":"narrow"},{"name":"inhibition of actin filament severing activity","type":"related"},{"name":"inhibition of barbed-end actin capping/severing activity","type":"related"},{"name":"negative regulation of F-actin severing","type":"exact"},{"name":"negative regulation of actin filament severing activity","type":"related"},{"name":"negative regulation of barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:1903919"}


id: FYPO:0004655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to cell division site","synonyms":[{"name":"increased protein localisation to cell division site","type":"exact"},{"name":"increased protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"increased protein localization to cell division site during vegetative growth","type":"exact"},{"name":"increased protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0004655"}


id: GO:0140376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Receiving a signal and transmitting it in a cell to initiate an innate immune response.","definition_xrefs":["PMID:31415752","PMID:28921463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"innate immune receptor activity","termid":"GO:0140376"}


id: PBO:0111531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 228","termid":"PBO:0111531"}


id: MONDO:0007201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blepharophimosis, Ptosis, and Epicanthus Inversus syndrome (BPES) is an ophthalmic disorder characterized by blepharophimosis, ptosis, epicanthus inversus, and telecanthus, that can appear associated with (type I) or without premature ovarian failure (POF) (type II).","definition_xrefs":["Orphanet:126"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","termid":"MONDO:0015217"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"telecanthus","termid":"MONDO:0008537"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047","MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"blepharophimosis, ptosis, and epicanthus inversus syndrome","secondary_identifiers":["MESH:C562419","OMIM:110100","SCTID:715391004","MEDGEN:66312","UMLS:C0220663","GARD:23","DOID:14778","NORD:862"],"synonyms":[{"name":"BPES","type":"exact"},{"name":"BPES type 1","type":"related"},{"name":"BPES with Duane retraction syndrome","type":"related"},{"name":"BPES with ovarian failure","type":"related"},{"name":"BPES with premature ovarian failure","type":"related"},{"name":"BPES without ovarian failure","type":"related"},{"name":"BPES, type 1","type":"related"},{"name":"BPES, type 2","type":"related"},{"name":"BPES, type I, autosomal recessive","type":"related"},{"name":"Blepharophimosis, Ptosis, Epicanthus Inversus Syndrome","type":"exact"},{"name":"blepharophimosis syndrome type 1","type":"related"},{"name":"blepharophimosis types 1 and 2","type":"exact"},{"name":"blepharophimosis, epicanthus inversus, and ptosis, type 1","type":"exact"},{"name":"blepharophimosis, epicanthus inversus, and ptosis, type 2","type":"exact"},{"name":"blepharophimosis, ptosis, and epicanthus inversus","type":"exact"},{"name":"blepharophimosis, ptosis, and epicanthus inversus syndrome","type":"exact"},{"name":"blepharophimosis, ptosis, and epicanthus inversus syndrome type 1","type":"related"},{"name":"blepharophimosis, ptosis, epicanthus inversus syndrome","type":"exact"},{"name":"blepharophimosis, ptosis, epicanthus inversus with ovarian failure","type":"related"},{"name":"blepharophimosis-epicanthus inversus-ptosis syndrome","type":"exact"}],"termid":"MONDO:0007201","xrefs":{"Monarch":{"xref_id":"0007201"}}}


id: GO:1901982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to maltose.","definition_xrefs":["GOC:TermGenie","PMID:21566157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide binding","termid":"GO:0048030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"maltose binding","termid":"GO:1901982"}


id: PBO:0026947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_during_meiotic_cell_cycle","termid":"PBO:0026947"}


id: MOD:00091
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to L-arginine amide.","definition_xrefs":["PubMed:2229025","RESID:AA0082","ChEBI:145897","PubMed:2753890","PubMed:743209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-arginine amide","synonyms":[{"name":"(2S)-2-amino-5-[(diaminomethylidene)amino]pentanamide","type":"exact"},{"name":"2-amino-5-carbamimidamidopentanamide","type":"exact"},{"name":"2-amino-5-guanidinopentanamide","type":"exact"},{"name":"ArgN","type":"exact"},{"name":"L-arginine amide","type":"exact"},{"name":"MOD_RES Arginine amide","type":"exact"},{"name":"amidated L-arginine","type":"exact"},{"name":"argininamide","type":"exact"}],"termid":"MOD:00091"}


id: FYPO:0001621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-arginine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular arginine level","synonyms":[{"name":"decreased cellular L-arginine level","type":"exact"},{"name":"decreased cellular arginine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular arginine level during vegetative growth","type":"exact"},{"name":"decreased level of arginine in cell","type":"exact"},{"name":"reduced cellular arginine level","type":"exact"},{"name":"reduced level of arginine in cell","type":"exact"}],"termid":"FYPO:0001621"}


id: PBO:0058075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4293","termid":"PBO:0058075"}


id: PBO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine-mismatch binding protein 1","termid":"PBO:0001465"}


id: MONDO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cryptosporidiosis (obsolete MONDO:0002091)","termid":"MONDO:0002091","xrefs":{"Monarch":{"xref_id":"0002091"}}}


id: GO:0018283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"},{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"iron incorporation into metallo-sulfur cluster","synonyms":[{"name":"iron incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018283"}


id: PATO:0000403
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave quality inhering in a bearer by virtue of the bearer's resembling a groove or fissure.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave","termid":"PATO:0001857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft","termid":"PATO:0000403"}


id: GO:0030670
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a phagocytic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle membrane","termid":"GO:0030666"},{"relation_name":"part_of","term_name":"phagocytic vesicle","termid":"GO:0045335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"phagocytic vesicle membrane","synonyms":[{"name":"phagosome membrane","type":"exact"}],"termid":"GO:0030670"}


id: FYPO:0002490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that has a greater length, diameter, and volume than normal, and undergoes two or more rounds of cell division and then dies. The ratio between cell length and diameter remains normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, abnormal morphology","termid":"FYPO:0002148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, swollen cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, enlarged cell","type":"related"},{"name":"inviable after spore germination, multiple cell divisions, increased cell size","type":"related"},{"name":"inviable after spore germination, multiple cell divisions, increased cell volume","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, large cell","type":"related"},{"name":"inviable following spore germination, multiple cell divisions, swollen cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, swollen cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, swollen cell","type":"exact"}],"termid":"FYPO:0002490"}


id: MONDO:0010364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-retinitis pigmentosa syndrome is characterized by moderate intellectual deficit and severe, early-onset retinitis pigmentosa. It has been described in five males spanning three generations of one family. Some patients also had microcephaly. It is transmitted as an X-linked recessive trait.","definition_xrefs":["Orphanet:85332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the short arm of chromosome X","termid":"MONDO:0017004"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-retinitis pigmentosa syndrome","secondary_identifiers":["UMLS:C1845136","SCTID:719808002","MEDGEN:336862","GARD:8360","ICD10CM:H35.5","OMIM:300578"],"synonyms":[{"name":"Aldred syndrome","type":"exact"},{"name":"X-linked mental handicap-retinitis pigmentosa syndrome","type":"related"},{"name":"chromosome Xp11.3 deletion syndrome","type":"related"},{"name":"chromosome xp11.3 deletion syndrome, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, with retinitis pigmentosa","type":"related"},{"name":"mental retardation, X-linked, with retinitis pigmentosa","type":"related"},{"name":"nonspecific intellectual disability associated with retinitis pigmentosa","type":"related"},{"name":"nonspecific mental retardation associated with retinitis pigmentosa","type":"related"},{"name":"retinitis pigmentosa and intellectual disability due to Xp11.3 microdeletion","type":"exact"},{"name":"retinitis pigmentosa and intellectual disability due to del(X)(p11.3)","type":"exact"},{"name":"retinitis pigmentosa and intellectual disability due to monosomy Xp11.3","type":"exact"}],"termid":"MONDO:0010364","xrefs":{"Monarch":{"xref_id":"0010364"}}}


id: PBO:0054158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1525","termid":"PBO:0054158"}


id: PBO:0069571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 843, pseudogene","termid":"PBO:0069571"}


id: MONDO:0043283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"silicosis","termid":"MONDO:0005960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silicosiderosis","secondary_identifiers":["icd11.foundation:273225437","MEDGEN:5480","GARD:8372","MESH:C537337","SCTID:34004002","UMLS:C0018929"],"synonyms":[{"name":"hematite miners' lung disease","type":"related"},{"name":"hematite pneumoconiosis","type":"related"},{"name":"iron miners lung","type":"related"},{"name":"siderosilicosis","type":"exact"},{"name":"silicosiderosis","type":"exact"}],"termid":"MONDO:0043283","xrefs":{"Monarch":{"xref_id":"0043283"}}}


id: MONDO:0019260
data:
  {"annotated_genes":["SJAG_02518","SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86233,86232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"}]},"cv_name":"mondo","definition":"A genetically heterogeneous group of neuronal ceroid lipofuscinoses (NCLs) with onset during the third decade of life, characterized by dementia, seizures and loss of motor capacities, and sometimes associated with visual loss caused by retinal degeneration.","definition_xrefs":["Orphanet:79262"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis","termid":"MONDO:0016295"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02518":null,"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0002525","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"adult neuronal ceroid lipofuscinosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200155","NORD:1341","GARD:10973","NANDO:2201244","UMLS:C0022797","icd11.foundation:1460031344","SCTID:62009002","MEDGEN:7230"],"synonyms":[{"name":"ANCL","type":"exact"},{"name":"CLN4 disease, adult autosomal dominant","type":"related"},{"name":"Kuf's disease","type":"related"},{"name":"Kufs disease","type":"exact"},{"name":"adult NCL","type":"exact"},{"name":"adult neuronal ceroid lipofuscinosis","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 4","type":"related"},{"name":"neuronal ceroid lipofuscinosis of adults","type":"exact"}],"termid":"MONDO:0019260","terms_by_termid":{"MONDO:0008083":null},"xrefs":{"Monarch":{"xref_id":"0019260"}}}


id: MONDO:0100477
data:
  {"annotated_genes":["SJAG_04608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018767"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that has its basis in the disruption of methylamine metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of peptide and amine metabolism","termid":"MONDO:0100473"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of methylamine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100477","terms_by_termid":{"MONDO:0018767":null},"xrefs":{"Monarch":{"xref_id":"0100477"}}}


id: FYPO:0003063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton","termid":"FYPO:0002397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cytoskeleton morphology","termid":"FYPO:0003063"}


id: GO:0009744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sucrose","synonyms":[{"name":"response to sucrose stimulus","type":"exact"}],"termid":"GO:0009744"}


id: PATO:0000487
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A response quality inhering in a bearer by virtue of the bearer's disposition to react to a stimulus or an agent.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to","termid":"PATO:0000077"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"responsive to","synonyms":[{"name":"responsive","type":"exact"}],"termid":"PATO:0000487"}


id: MONDO:0001299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autonomic neuropathy that is caused by diabetes mellitus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic neuropathy","termid":"MONDO:0001300"},{"relation_name":"is_a","term_name":"diabetic neuropathy","termid":"MONDO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"diabetic autonomic neuropathy","secondary_identifiers":["DOID:11503","SCTID:50620007","NCIT:C27068","ICD9:337.1","UMLS:C0271686","MEDGEN:82887"],"termid":"MONDO:0001299","xrefs":{"Monarch":{"xref_id":"0001299"}}}


id: MONDO:0023616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial leiomyomatosis (obsolete MONDO:0023616)","termid":"MONDO:0023616","xrefs":{"Monarch":{"xref_id":"0023616"}}}


id: PBO:0080274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 37 pseudogene","termid":"PBO:0080274"}


id: PBO:0041700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 6","termid":"PBO:0041700"}


id: PBO:0085207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outward-rectifier potassium channel of the plasma membrane; has two pore domains in tandem, each of which forms a functional channel permeable to potassium; carboxy tail functions to prevent inner gate closures; target of K1 toxin","termid":"PBO:0085207"}


id: MONDO:0015757
data:
  {"annotated_genes":["SJAG_00980","SJAG_02527","SJAG_02460"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85979,85980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011508"},{"annotations":[87125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic and lymphoid system neoplasm","termid":"MONDO:0002334"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_02460":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoid hemopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:171898","UMLS:C5680515","GARD:20131","MEDGEN:1842533"],"termid":"MONDO:0015757","terms_by_termid":{"MONDO:0009693":null,"MONDO:0011508":null},"xrefs":{"Monarch":{"xref_id":"0015757"}}}


id: MONDO:0026722
data:
  {"annotated_genes":["SJAG_03698","SJAG_03418"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85709,85710],"is_not":false,"summary":null,"term":"MONDO:0026722"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03418":null,"SJAG_03698":null},"genotype_count":0,"is_obsolete":false,"name":"Mullegama-Klein-Martinez syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111845","OMIM:301022","UMLS:C5193008","MEDGEN:1683985"],"synonyms":[{"name":"MKMS","type":"related"},{"name":"MULLEGAMA-KLEIN-MARTINEZ SYNDROME","type":"related"},{"name":"Neurodevelopmental Disorder, X-Linked, With Craniofacial Abnormalities","type":"related"}],"termid":"MONDO:0026722","terms_by_termid":{"MONDO:0026722":null},"xrefs":{"Monarch":{"xref_id":"0026722"}}}


id: PBO:0038400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-relation_between_physical_entity_and_a_process_or_stage","termid":"PBO:0038400"}


id: GO:0031663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a lipopolysaccharide (LPS) to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Lipopolysaccharides are major components of the outer membrane of Gram-negative bacteria, making them prime targets for recognition by the immune system.","definition_xrefs":["GOC:mah","GOC:signaling","PMID:15379975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to lipopolysaccharide","termid":"GO:0071222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"LPS-mediated signaling pathway","type":"exact"},{"name":"lipopolysaccharide-mediated signalling pathway","type":"exact"}],"termid":"GO:0031663"}


id: PBO:0064737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 73","termid":"PBO:0064737"}


id: MONDO:0017394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ketamine-induced biliary dilatation is an acquired biliary tract disease caused by the abusive consumption of ketamine, which results in the fusiform dilatation of the common bile ducts (CBD) without obstructive lesions or dilatation of the intrahepatic biliary ducts. Possible manifestations of the underlying cholangiopathy include epigastric pain and impaired liver function. Severity of CBD dilatation appears to correlate with the duration of ketamine consumption and the condition has been reported to be reversible in abstinent patients.","definition_xrefs":["Orphanet:293807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"},{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"ketamine-induced biliary dilatation","secondary_identifiers":["SCTID:726613003","UMLS:C4512018","MEDGEN:1380193"],"termid":"MONDO:0017394","xrefs":{"Monarch":{"xref_id":"0017394"}}}


id: GO:0106227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glutarylation of a lysine residue in a protein.","definition_xrefs":["PMID:31542297","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine glutarylation","termid":"GO:0106227"}


id: MONDO:1010900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in dogs due to a mutation in the MFSD8 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, dog","termid":"MONDO:1011570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, MFSD8-related, dog","secondary_identifiers":["OMIA:001962-9615"],"synonyms":[{"name":"CLN7","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 7, dog","type":"related"}],"termid":"MONDO:1010900","xrefs":{"Monarch":{"xref_id":"1010900"}}}


id: PBO:0076478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAP binding protein","termid":"PBO:0076478"}


id: PBO:0044126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 12, pseudogene","termid":"PBO:0044126"}


id: PBO:0063601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 13","termid":"PBO:0063601"}


id: PBO:0088051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like modifier involved in autophagy and the Cvt pathway; conserved; conjugated to Atg5p to form a complex involved in Atg8p lipidation; Atg5p-Atg12p conjugate enhances E2 activity of Atg3p by rearranging its catalytic site, also forms a complex with Atg16p; the Atg5-Atg12/Atg16 complex binds to membranes and is essential for autophagosome formation; homolog of mammalian ULK1","termid":"PBO:0088051"}


id: PBO:0080937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY2 transcription factor","termid":"PBO:0080937"}


id: PBO:0026779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_heat","termid":"PBO:0026779"}


id: MONDO:0019354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stickler syndrome is an inherited vitreoretinopathy characterized by the association of ocular signs with more or less complete forms of Pierre-Robin sequence, bone disorders, and sensorineural deafness (10% of cases).","definition_xrefs":["Orphanet:828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005497","MONDO:0005328"],"is_obsolete":false,"name":"Stickler syndrome","secondary_identifiers":["GARD:10782","icd11.foundation:246271691","ICD9:759.89","SCTID:78675000","DOID:0080046","UMLS:C0265253","NCIT:C74984","NORD:1739","MEDGEN:120521","MedDRA:10063402","OMIMPS:108300"],"synonyms":[{"name":"Stickler syndrome","type":"exact"},{"name":"hereditary progressive arthroophthalmopathy","type":"exact"}],"termid":"MONDO:0019354","xrefs":{"Monarch":{"xref_id":"0019354"}}}


id: MONDO:1012935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteochondromatosis that occurs in domestic cats due to a mutation in the EXT1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"osteochondromatosis, non-human animal","termid":"MONDO:1011972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondromatosis, EXT1-related, domestic cat","secondary_identifiers":["OMIA:002554-9685"],"termid":"MONDO:1012935","xrefs":{"Monarch":{"xref_id":"1012935"}}}


id: MONDO:0044876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete drug hypersensitivity syndrome (obsolete MONDO:0044876)","termid":"MONDO:0044876","xrefs":{"Monarch":{"xref_id":"0044876"}}}


id: PR:O59678
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis regulatory protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR17602:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis regulatory protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.16","secondary_identifiers":["UniProtKB:O59678"],"synonyms":[{"name":"Spom972h-RRS1","type":"exact"}],"termid":"PR:O59678"}


id: PBO:0076741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 11 family, X-linked 1","termid":"PBO:0076741"}


id: PBO:0079076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-4","termid":"PBO:0079076"}


id: PBO:0028052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_morphology","termid":"PBO:0028052"}


id: PATO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A colour that is very pale yellowish brown.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"light yellow brown","termid":"PATO:0002413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige","termid":"PATO:0002410"}


id: MONDO:0002578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of embryonal rhabdomyosarcoma arising from organs with a mucosal epithelial surface. It is characterized by the formation of a cambium layer in the affected tissue and polypoid nodules within an abundant myxoid stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal rhabdomyosarcoma","termid":"MONDO:0009993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"botryoid rhabdomyosarcoma","secondary_identifiers":["MEDGEN:727079","NCIT:C9150","UMLS:C1306574","DOID:3255","ICD9:171.9","SCTID:404052009"],"synonyms":[{"name":"botryoid sarcoma","type":"exact"},{"name":"botryoid sarcoma (morphologic abnormality)","type":"exact"},{"name":"botryoid-type embryonal rhabdomyosarcoma","type":"exact"},{"name":"sarcoma botryoides","type":"exact"}],"termid":"MONDO:0002578","xrefs":{"Monarch":{"xref_id":"0002578"}}}


id: PBO:0059704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 12","termid":"PBO:0059704"}


id: PBO:0053883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1163","termid":"PBO:0053883"}


id: GO:0030940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a photoperiod, an intermittent cycle of light (day) and dark (night) photoperiod regimes, with the dark phase being longer than the light.","definition_xrefs":["GOC:pj"],"gene_count":0,"genotype_count":0,"name":"obsolete response to short-day photoperiod (obsolete GO:0030940)","synonyms":[{"name":"response to short-day photoperiod","type":"exact"}],"termid":"GO:0030940"}


id: PBO:0087655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HIR complex; a nucleosome assembly complex involved in regulation of histone gene transcription; involved in position-dependent gene silencing and nucleosome reassembly; ortholog of human CABIN1 protein","termid":"PBO:0087655"}


id: PBO:0016518
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mkh1-Pek1-Pmk1 MAP kinase","termid":"PBO:0016518"}


id: MONDO:0004177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal growth of the cells of the urethra (lower urinary tract) without malignant characteristics.","definition_xrefs":["NCIT:C3619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign urinary system neoplasm","termid":"MONDO:0004180"},{"relation_name":"is_a","term_name":"urethra neoplasm","termid":"MONDO:0021239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign urethral neoplasm","secondary_identifiers":["ICD9:223.81","UMLS:C0154019","DOID:730","SCTID:92466006","MEDGEN:57812"],"synonyms":[{"name":"benign neoplasm of the urethra","type":"exact"},{"name":"benign neoplasm of urethra","type":"exact"},{"name":"benign tumor of the urethra","type":"exact"},{"name":"benign tumor of urethra","type":"exact"},{"name":"benign tumour of the urethra","type":"exact"},{"name":"benign tumour of urethra","type":"exact"},{"name":"benign urethra neoplasm","type":"exact"},{"name":"benign urethra tumor","type":"exact"},{"name":"benign urethra tumour","type":"exact"},{"name":"benign urethral neoplasm","type":"exact"},{"name":"benign urethral tumor","type":"exact"},{"name":"benign urethral tumour","type":"exact"},{"name":"neoplasm. urethra","type":"exact"},{"name":"urethra benign neoplasm","type":"exact"},{"name":"urethral benign neoplasm","type":"related"}],"termid":"MONDO:0004177","xrefs":{"Monarch":{"xref_id":"0004177"}}}


id: PBO:0001334
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residue","termid":"PBO:0001334"}


id: MONDO:0013091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liver PhK deficiency caused by variants in the PHKG2 gene","direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to liver phosphorylase kinase deficiency","termid":"MONDO:0020693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002515","MONDO:0004335","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease IXc","secondary_identifiers":["UMLS:C2751643","DOID:0111043","MEDGEN:442778","GARD:18387","MESH:C567809","NANDO:2201166","NANDO:1200849","OMIM:613027"],"synonyms":[{"name":"GSD IXc","type":"related"},{"name":"GSD type 9C","type":"exact"},{"name":"GSD type IXc","type":"exact"},{"name":"GSD9C","type":"exact"},{"name":"PHKG2 glycogen storage disease","type":"exact"},{"name":"PHKG2-related glycogen storage disease type IX","type":"exact"},{"name":"glycogen storage disease IXc","type":"exact"},{"name":"glycogen storage disease caused by mutation in PHKG2","type":"exact"},{"name":"glycogen storage disease type IXc","type":"exact"}],"termid":"MONDO:0013091","xrefs":{"Monarch":{"xref_id":"0013091"}}}


id: RO:0002159
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serially_homologous_to","termid":"RO:0002159"}


id: PBO:0078435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-5","termid":"PBO:0078435"}


id: MONDO:1011763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal acrodermatitis, non-human animal","secondary_identifiers":["OMIA:002146"],"termid":"MONDO:1011763","xrefs":{"Monarch":{"xref_id":"1011763"}}}


id: PBO:0057299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 513c","termid":"PBO:0057299"}


id: PBO:0082312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Assembly factor for F1 sector of mitochondrial F1F0 ATP synthase; conserved protein; required for assembly of alpha and beta subunits into F1 sector of mitochondrial F1F0 ATP synthase; human homolog ATPAF2 can complement yeast atp12 mutant; mutation of human homolog reduces active ATP synthase levels and is associated with the disorder ATPAF2 deficiency","termid":"PBO:0082312"}


id: FYPO:0007015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the 3' ends of tRNA genes is increased.","definition_xrefs":["PomBase:mah","PMID:31294478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at tRNA genes","termid":"FYPO:0004033"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes","termid":"FYPO:0007734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of tRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at 3' end of tRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at 3' end of tRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of transfer RNA genes","type":"exact"},{"name":"increased protein localization to chromatin at tRNA genes at 3' end","type":"exact"}],"termid":"FYPO:0007015"}


id: GO:0050933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an early stripe melanocyte (ESM). In zebrafish, ESMs develop during the first phase (2-3 weeks of development) of the larva to adult transition (2-4 weeks of development).","definition_xrefs":["PMID:11858836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocyte differentiation","termid":"GO:0030318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"early stripe melanocyte differentiation","synonyms":[{"name":"early stripe melanocyte cell differentiation","type":"exact"},{"name":"early stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050933"}


id: GO:1901790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(2,3-dihydroxyphenyl)propanoate.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-(2,3-dihydroxyphenyl)propanoate metabolic process","synonyms":[{"name":"3-(2,3-dihydroxyphenyl)propanoate metabolism","type":"exact"}],"termid":"GO:1901790"}


id: MONDO:0700088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paroxysmal non-kinesigenic dyskinesia (PNKD) is a form of paroxysmal dyskinesia, characterized by attacks of dystonic or choreathetotic movements precipitated by stress, fatigue, coffee or alcohol intake or menstruation.","definition_xrefs":["Orphanet:98810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dyskinesia","termid":"MONDO:0015427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"paroxysmal nonkinesigenic dyskinesia","secondary_identifiers":["GARD:8722","MEDGEN:401504","UMLS:C1869117"],"synonyms":[{"name":"DYT-MR-1","type":"related"},{"name":"Paroxysomal nonkinesigenic dyskinesia","type":"related"},{"name":"Paroxystic non-kinesigenic choreoathetosis","type":"exact"},{"name":"paroxysmal non-kinesigenic dyskinesia","type":"related"}],"termid":"MONDO:0700088","xrefs":{"Monarch":{"xref_id":"0700088"}}}


id: GO:0015182
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102596,109823],"is_not":false,"summary":null,"term":"GO:0015182"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-asparagine from one side of a membrane to the other. L-asparagine is the L-enantiomer of alpha-aminosuccinamic acid.","definition_xrefs":["GOC:go_curators","GOC:jsg","GOC:mah","GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-asparagine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-asparagine transporter activity","type":"broad"},{"name":"asparagine/glutamine permease activity","type":"narrow"}],"termid":"GO:0015182","terms_by_termid":{"GO:0015182":null}}


id: PBO:0069718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 998, pseudogene","termid":"PBO:0069718"}


id: PBO:0047919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(10)(q22.1)","termid":"PBO:0047919"}


id: PBO:0049932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietically expressed homeobox","termid":"PBO:0049932"}


id: GO:0015054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gastrin and transmitting the signal across the membrane by activating an associated G-protein to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"gastrin receptor activity","synonyms":[{"name":"cholecystokinin-B receptor activity","type":"related"}],"termid":"GO:0015054"}


id: PBO:0083949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins; Ost3p is important for N-glycosylation of a subset of proteins including modification of Pmt2p at N131 and N403","termid":"PBO:0083949"}


id: GO:0019447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-cysteine, (S)-2-amino-3-mercaptopropanoic acid, which occurs naturally in firefly luciferin.","definition_xrefs":["PMID:11527960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine catabolic process","termid":"GO:0009093"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-cysteine metabolic process","termid":"GO:0046438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-cysteine catabolic process","synonyms":[{"name":"D-cysteine breakdown","type":"exact"},{"name":"D-cysteine catabolism","type":"exact"},{"name":"D-cysteine degradation","type":"exact"}],"termid":"GO:0019447"}


id: GO:0033923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6)-alpha-D-glucosidic linkages in polysaccharides, to remove successive isomaltose units from the non-reducing ends of the chains.","definition_xrefs":["EC:3.2.1.94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"glucan 1,6-alpha-isomaltosidase activity","secondary_identifiers":["MetaCyc:3.2.1.94-RXN"],"synonyms":[{"name":"1,6-alpha-D-glucan isomaltohydrolase activity","type":"related"},{"name":"G2-dextranase activity","type":"related"},{"name":"exo-isomaltohydrolase activity","type":"related"},{"name":"isomalto-dextranase activity","type":"related"},{"name":"isomaltodextranase activity","type":"related"}],"termid":"GO:0033923"}


id: FYECO:0000193
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which dethiobiotin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ dethiobiotin","synonyms":[{"name":"desthiobiotin added","type":"exact"}],"termid":"FYECO:0000193"}


id: GO:0044199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the host nucleus and separating its contents from the rest of the host cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"},{"relation_name":"part_of","term_name":"host cell endomembrane system","termid":"GO:0033645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear envelope","termid":"GO:0044199"}


id: GO:0051563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of calcium ions within the smooth endoplasmic reticulum of a cell or between the smooth endoplasmic reticulum and its surroundings.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum calcium ion homeostasis","termid":"GO:0032469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"smooth endoplasmic reticulum calcium ion homeostasis","synonyms":[{"name":"calcium ion homeostasis in smooth ER","type":"exact"},{"name":"calcium ion homeostasis in smooth endoplasmic reticulum","type":"exact"},{"name":"regulation of calcium ion concentration in smooth ER","type":"exact"},{"name":"regulation of calcium ion concentration in smooth endoplasmic reticulum","type":"exact"},{"name":"regulation of smooth ER calcium ion concentration","type":"exact"},{"name":"regulation of smooth endoplasmic reticulum calcium ion concentration","type":"exact"},{"name":"smooth ER calcium ion concentration regulation","type":"exact"},{"name":"smooth ER calcium ion homeostasis","type":"exact"},{"name":"smooth endoplasmic reticulum calcium ion concentration regulation","type":"exact"}],"termid":"GO:0051563"}


id: PBO:0031234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_or_maintenance_of_actin_cytoskeleton_polarity","termid":"PBO:0031234"}


id: SO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000292 repetitive_element (obsolete SO:0000292)","termid":"SO:0000292"}


id: PR:O13926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C4.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0665 family protein C23C4.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.06c","synonyms":[{"name":"Spom972h-SPAC23C4.06c","type":"exact"}],"termid":"PR:O13926"}


id: PBO:0050671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 6","termid":"PBO:0050671"}


id: MONDO:0020464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Euryblepharon is a rare congenital eyelid anomaly of unknown etiology characterized by the bilateral horizontal enlargement of the palpebral fissure with vertically shortened eyelids, lateral canthus malpositioning and lateral ectropion. It may be isolated or associated with other ocular anomalies (e.g. strabismus or telecanthus) or systemic anomalies (e.g. blepharo-cheilo-odontic syndrome). In severe cases, it may result in lagophthalmos and exposure keratopathy, requiring surgical treatment.","definition_xrefs":["Orphanet:99172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital ectropion","termid":"MONDO:0020161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"euryblepharon","secondary_identifiers":["MEDGEN:724511","GARD:19674","icd11.foundation:2086603843","UMLS:C1303001","SCTID:400954002"],"termid":"MONDO:0020464","xrefs":{"Monarch":{"xref_id":"0020464"}}}


id: PBO:0074519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A11","termid":"PBO:0074519"}


id: PBO:0068295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 2","termid":"PBO:0068295"}


id: MONDO:0017762
data:
  {"annotated_genes":["SJAG_00379","SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012251"},{"annotations":[85251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010651"},{"annotations":[86890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010572"},{"annotations":[86931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010200"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of cellular copper ion homeostasis.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of mineral absorption and transport","termid":"MONDO:0017761"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of copper metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:507647","MedDRA:10061091","ICD9:275.1","Orphanet:309839","icd11.foundation:1926278296","UMLS:C0012714","SCTID:79886009","GARD:21354"],"synonyms":[{"name":"copper Transport disorders","type":"related"},{"name":"inborn cellular copper ion homeostasis disorder","type":"exact"},{"name":"inborn error of cellular copper ion homeostasis","type":"exact"},{"name":"rare inborn error of cellular copper ion homeostasis","type":"exact"}],"termid":"MONDO:0017762","terms_by_termid":{"MONDO:0010200":null,"MONDO:0010572":null,"MONDO:0010651":null,"MONDO:0012251":null},"xrefs":{"Monarch":{"xref_id":"0017762"}}}


id: GO:0010715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"regulates","term_name":"extracellular matrix disassembly","termid":"GO:0022617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of extracellular matrix disassembly","synonyms":[{"name":"regulation of extracellular matrix breakdown","type":"exact"},{"name":"regulation of extracellular matrix degradation","type":"exact"}],"termid":"GO:0010715"}


id: PBO:0001472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S5 (predicted)","termid":"PBO:0001472"}


id: FYPO:0001287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phospholipid measured in a cell differs from normal. A phospholipid is any lipid containing phosphoric acid as a mono- or di-ester.","definition_xrefs":["CHEBI:16247","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered phospholipid level","synonyms":[{"name":"abnormal phospholipid level","type":"exact"},{"name":"altered cellular phospholipid level","type":"exact"},{"name":"altered phospholipid level during mitotic cell cycle","type":"related"},{"name":"altered phospholipid level during vegetative growth","type":"exact"}],"termid":"FYPO:0001287"}


id: PBO:0075774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 2","termid":"PBO:0075774"}


id: MONDO:0002069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the UBERON:0035289.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female breast carcinoma","termid":"MONDO:0004379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"female breast axillary tail cancer","secondary_identifiers":["SCTID:188156001","DOID:1650","ICD9:174.6","ICD10CM:C50.6","UMLS:C0153554","MEDGEN:509328"],"synonyms":[{"name":"axillary tail of breast cancer","type":"exact"},{"name":"cancer of axillary tail of breast","type":"exact"},{"name":"malignant axillary tail of breast neoplasm","type":"exact"},{"name":"malignant neoplasm of axillary tail of breast","type":"exact"},{"name":"malignant neoplasm of axillary tail of female breast","type":"exact"}],"termid":"MONDO:0002069","xrefs":{"Monarch":{"xref_id":"0002069"}}}


id: PBO:0050666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 4","termid":"PBO:0050666"}


id: PBO:0081398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF236 divergent transcript","termid":"PBO:0081398"}


id: MONDO:0044279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bone mineral density quantitative trait locus 15 (obsolete MONDO:0044279)","secondary_identifiers":["OMIM:613418"],"synonyms":[{"name":"BMND15","type":"related"},{"name":"bone mineral density QTL 15","type":"exact"},{"name":"bone mineral density quantitative trait locus 15","type":"related"},{"name":"compression fracture, susceptibility to","type":"related"},{"name":"metaphyseal fracture, susceptibility to","type":"related"},{"name":"osteoporosis, susceptibility to","type":"related"}],"termid":"MONDO:0044279","xrefs":{"Monarch":{"xref_id":"0044279"}}}


id: PBO:0063695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein geranylgeranyltransferase type I subunit beta pseudogene 2","termid":"PBO:0063695"}


id: PR:O74846
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component sec6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.10c","secondary_identifiers":["UniProtKB:O74846"],"synonyms":[{"name":"Spom972h-EXOC3","type":"exact"}],"termid":"PR:O74846"}


id: GO:1990048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances in neuronal dense core vesicles along axonal microtubules towards the presynapse.","definition_xrefs":["PMID:23358451","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"},{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"dense core granule cytoskeletal transport","termid":"GO:0099519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"anterograde neuronal dense core vesicle transport","synonyms":[{"name":"anterograde dense core granule trafficking","type":"exact"},{"name":"anterograde dense core granule transport","type":"exact"}],"termid":"GO:1990048"}


id: PBO:0030030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_shmoo_formation","termid":"PBO:0030030"}


id: PBO:0085128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein implicated in ribosome biogenesis; deletion extends chronological lifespan","termid":"PBO:0085128"}


id: GO:0141058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue of the histone H4 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:17947579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone demethylase activity","termid":"GO:0032452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0032452"],"is_obsolete":false,"name":"histone H4 demethylase activity","termid":"GO:0141058"}


id: PBO:0052236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9 pseudogene 4","termid":"PBO:0052236"}


id: MONDO:0011377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant condition caused by mutation(s) in the SCN5A gene, encoding sodium channel protein type 5 subunit alpha. It is characterized by a prolonged QT interval that may result in torsade de pointes, ventricular fibrillation and/or sudden cardiac death.","definition_xrefs":["NCIT:C137959"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 3","secondary_identifiers":["DOID:0110646","OMIM:603830","UMLS:C1859062","MESH:C565840","MEDGEN:349087","GARD:3286"],"synonyms":[{"name":"LQT3","type":"exact"},{"name":"SCN5A long QT syndrome","type":"exact"},{"name":"long QT syndrome 2/3, digenic","type":"related"},{"name":"long QT syndrome 3","type":"exact"},{"name":"long QT syndrome 3, acquired, susceptibility to","type":"related"},{"name":"long QT syndrome 3/6, digenic","type":"related"},{"name":"long QT syndrome caused by mutation in SCN5A","type":"exact"},{"name":"long QT syndrome type 3","type":"exact"}],"termid":"MONDO:0011377","xrefs":{"Monarch":{"xref_id":"0011377"}}}


id: GO:0062125
data:
  {"annotated_genes":["SJAG_01249","SJAG_01517","SJAG_03550"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98506,112465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[100260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA).","definition_xrefs":["PMID:28285835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"regulates","term_name":"mitochondrial gene expression","termid":"GO:0140053"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01249":null,"SJAG_01517":null,"SJAG_03550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0140053","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial gene expression","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062125","terms_by_termid":{"GO:0070131":null,"GO:0070134":null}}


id: FYPO:0000581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of spore germination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased spore germination frequency","synonyms":[{"name":"decreased spore germination","type":"exact"},{"name":"decreased spore viability","type":"related"},{"name":"reduced spore germination frequency","type":"exact"},{"name":"reduced spore viability","type":"related"},{"name":"spore germination: decreased","type":"related"}],"termid":"FYPO:0000581"}


id: MONDO:1010677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microtia that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtia, non-human animal","termid":"MONDO:1010091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtia, sheep","secondary_identifiers":["OMIA:001952-9940"],"termid":"MONDO:1010677","xrefs":{"Monarch":{"xref_id":"1010677"}}}


id: GO:0015629
data:
  {"annotated_genes":["SJAG_01114","SJAG_04644","SJAG_02566","SJAG_01017","SJAG_00970","SJAG_01665","SJAG_04597","SJAG_01384","SJAG_01894","SJAG_03379","SJAG_03455","SJAG_01889","SJAG_02700","SJAG_03673","SJAG_02266","SJAG_00750","SJAG_02245","SJAG_03581","SJAG_03564","SJAG_02718","SJAG_00228","SJAG_02392","SJAG_00845","SJAG_05185","SJAG_04703","SJAG_00229","SJAG_05285","SJAG_01268","SJAG_00185","SJAG_02177","SJAG_02431","SJAG_01277","SJAG_03681","SJAG_04461","SJAG_04724","SJAG_00938","SJAG_04077","SJAG_02282","SJAG_02486","SJAG_02737","SJAG_03357","SJAG_00907","SJAG_03375","SJAG_00082","SJAG_03646","SJAG_01943","SJAG_03631","SJAG_01143","SJAG_01739","SJAG_04886","SJAG_03625","SJAG_02511","SJAG_04624","SJAG_01732","SJAG_03596","SJAG_00700","SJAG_00920","SJAG_00521","SJAG_01787","SJAG_03444","SJAG_00397","SJAG_02202","SJAG_04465","SJAG_00152","SJAG_04901","SJAG_00649","SJAG_01171","SJAG_02075","SJAG_04052","SJAG_04479","SJAG_00268","SJAG_02864","SJAG_04001","SJAG_03088","SJAG_01993","SJAG_03044","SJAG_03703","SJAG_00677","SJAG_00667","SJAG_00807","SJAG_03145","SJAG_04498","SJAG_03011","SJAG_04100","SJAG_02278","SJAG_01748","SJAG_03086","SJAG_04781","SJAG_02320","SJAG_02869","SJAG_03025","SJAG_01964","SJAG_04517","SJAG_01888","SJAG_02169","SJAG_03887","SJAG_04887","SJAG_03453","SJAG_03374","SJAG_04509","SJAG_05001","SJAG_02838","SJAG_03119","SJAG_02831","SJAG_00663","SJAG_03380","SJAG_03146","SJAG_00279","SJAG_04375","SJAG_03704","SJAG_04982","SJAG_00140","SJAG_02228","SJAG_04621","SJAG_03465"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80201],"is_not":false,"summary":null,"term":"GO:0015629"},{"annotations":[101541,98689,104938],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099079"},{"annotations":[89151],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030478"},{"annotations":[76706,105820,111953,90461,104957,74276,67864,114103,110476,71843,92374,93449,95070,75022,75851,104939,100747,106647,77473,65764,97711,74602,79009,99479,68917,93614,102853,69764,110810,97514,101542,68921,87934,79364,112694,106832,115957,114670,118285,105149,64823,79850,100716,78951,108845,111458,118649,73739,102532,76673,111979],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030479"},{"annotations":[95071,75452,71192,76551,108846],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005884"},{"annotations":[119037,71190,77007],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032432"},{"annotations":[119020,119036,119022,119023,119021,119024,119342],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005826"},{"annotations":[77962,76325,77662,79542,79716,74604,78695],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005885"},{"annotations":[94994,67466,80234,76438,110840],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005869"},{"annotations":[78953,79851],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008290"},{"annotations":[119370,98084,107920],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070648"},{"annotations":[93813,115964,107921,88879,114413,101739,107860,95156,119372,92305,99947,101738,88063,99352,90634,111107,93617],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[74631,101060,106688,92333,90512,93618,118628,119098,115606,115690,117434,119103,98085,119100,105153,89112,94370,89599,101067,119105,87677,76240,119107,110550,119371],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110085"},{"annotations":[117669,100499,108851,100333,104944],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120106"},{"annotations":[90559,110590,113148,96996,89774,94199,100730,106002,108852,94730,95636,112093,88060,103487,117687,117670,96111],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120105"},{"annotations":[103711,97825,116731,116825,107925,79544,108853,78051,92118,97443,99914,106841,100758,117671,97692],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120104"},{"annotations":[57199,62194],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016459"},{"annotations":[96662,103045,95159],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045160"},{"annotations":[71513,79659,72308,117673,97445],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016460"},{"annotations":[65835],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001725"}]},"cv_name":"cellular_component","definition":"The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.","definition_xrefs":["ISBN:0395825172","ISBN:0815316194","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":115,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00140":null,"SJAG_00152":null,"SJAG_00185":null,"SJAG_00228":null,"SJAG_00229":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00397":null,"SJAG_00521":null,"SJAG_00649":null,"SJAG_00663":null,"SJAG_00667":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00750":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_00907":null,"SJAG_00920":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01017":null,"SJAG_01114":null,"SJAG_01143":null,"SJAG_01171":null,"SJAG_01268":null,"SJAG_01277":null,"SJAG_01384":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01739":null,"SJAG_01748":null,"SJAG_01787":null,"SJAG_01888":null,"SJAG_01889":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02169":null,"SJAG_02177":null,"SJAG_02202":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02266":null,"SJAG_02278":null,"SJAG_02282":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02486":null,"SJAG_02511":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_02718":null,"SJAG_02737":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_02869":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03044":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03145":null,"SJAG_03146":null,"SJAG_03357":null,"SJAG_03374":null,"SJAG_03375":null,"SJAG_03379":null,"SJAG_03380":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03455":null,"SJAG_03465":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03646":null,"SJAG_03673":null,"SJAG_03681":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_04001":null,"SJAG_04052":null,"SJAG_04077":null,"SJAG_04100":null,"SJAG_04375":null,"SJAG_04461":null,"SJAG_04465":null,"SJAG_04479":null,"SJAG_04498":null,"SJAG_04509":null,"SJAG_04517":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04624":null,"SJAG_04644":null,"SJAG_04703":null,"SJAG_04724":null,"SJAG_04781":null,"SJAG_04886":null,"SJAG_04887":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05001":null,"SJAG_05185":null,"SJAG_05285":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"actin cytoskeleton","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:27734801":null,"PMID:28655757":null,"PMID:36148799":null},"termid":"GO:0015629","terms_by_termid":{"GO:0001725":null,"GO:0005826":null,"GO:0005869":null,"GO:0005884":null,"GO:0005885":null,"GO:0008290":null,"GO:0015629":null,"GO:0016459":null,"GO:0016460":null,"GO:0030478":null,"GO:0030479":null,"GO:0032432":null,"GO:0045160":null,"GO:0070648":null,"GO:0099079":null,"GO:0110085":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null,"GO:1990819":null}}


id: GO:0016210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA = 4 CoA + naringenin chalcone + 3 CO2.","definition_xrefs":["EC:2.3.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"naringenin-chalcone synthase activity","secondary_identifiers":["RHEA:11128","MetaCyc:NARINGENIN-CHALCONE-SYNTHASE-RXN"],"synonyms":[{"name":"DOCS","type":"narrow"},{"name":"malonyl-CoA:4-coumaroyl-CoA malonyltransferase (cyclizing)","type":"broad"}],"termid":"GO:0016210"}


id: MONDO:0957564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital smooth muscle hamartoma, with or without hemihypertrophy","secondary_identifiers":["UMLS:C5882676","MEDGEN:1847218","OMIM:620470"],"termid":"MONDO:0957564","xrefs":{"Monarch":{"xref_id":"0957564"}}}


id: MOD:00915
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-proline residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-proline residue","synonyms":[{"name":"ModPro","type":"exact"}],"termid":"MOD:00915"}


id: GO:0140078
data:
  {"annotated_genes":["SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65316],"is_not":false,"summary":null,"term":"GO:0140078"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of an AP site 3' of the baseless site by a beta-lyase mechanism, leaving an unsaturated aldehyde, termed a 3'-(4-hydroxy-5-phospho-2-pentenal) residue, and a 5'-phosphate.","definition_xrefs":["PMID:1698278","RHEA:66592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-(apurinic or apyrimidinic site) endonuclease activity","termid":"GO:0003906"},{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"class I DNA-(apurinic or apyrimidinic site) endonuclease activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:4.2.99.18","MetaCyc:4.2.99.18-RXN","Wikipedia:AP_endonuclease"],"synonyms":[{"name":"AP endonuclease class I activity","type":"related"},{"name":"AP lyase activity","type":"related"},{"name":"AP site-DNA 5'-phosphomonoester-lyase activity","type":"exact"},{"name":"DNA-(apurinic or apyrimidinic site) 5'-phosphomonoester-lyase activity","type":"exact"},{"name":"DNA-(apurinic or apyrimidinic site) lyase activity","type":"exact"},{"name":"class I AP endonuclease activity","type":"related"},{"name":"class I DNA-(apurinic or apyrimidinic site) lyase activity","type":"exact"}],"termid":"GO:0140078","terms_by_termid":{"GO:0140078":null}}


id: PBO:0040045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 1","termid":"PBO:0040045"}


id: GO:0099165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane of a symmetric synapse. Its major components include that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components. This structure is not as thick or electron dense as the postsynaptic density found in asymmetric synapses.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"},{"relation_name":"part_of","term_name":"postsynaptic specialization of symmetric synapse","termid":"GO:0099629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization of symmetric synapse, intracellular component","termid":"GO:0099165"}


id: PBO:0039214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C5, pseudogene","termid":"PBO:0039214"}


id: PBO:0029274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_MCB_promoters_during_cellular_response_to_hydroxyurea","termid":"PBO:0029274"}


id: PBO:0077758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20L divergent transcript","termid":"PBO:0077758"}


id: MONDO:0033622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 44","secondary_identifiers":["UMLS:C5436678","MEDGEN:1750188","DOID:0112109","OMIM:619044"],"synonyms":[{"name":"SPGF44","type":"exact"}],"termid":"MONDO:0033622","xrefs":{"Monarch":{"xref_id":"0033622"}}}


id: PBO:0038559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abl interactor 1 pseudogene 1","termid":"PBO:0038559"}


id: GO:1900940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (Z)-nonadeca-1,14-diene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900938"},{"relation_name":"positively_regulates","term_name":"(Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of (Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"activation of (Z)-nonadeca-1,14-diene metabolic process","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900940"}


id: GO:1905528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Golgi lumen acidification.","definition_xrefs":["GO_REF:0000058","GOC:dph","GOC:TermGenie","PMID:23447592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular pH reduction","termid":"GO:0032849"},{"relation_name":"is_a","term_name":"regulation of Golgi lumen acidification","termid":"GO:1905526"},{"relation_name":"positively_regulates","term_name":"Golgi lumen acidification","termid":"GO:0061795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Golgi lumen acidification","synonyms":[{"name":"activation of Golgi lumen acidification","type":"narrow"},{"name":"up regulation of Golgi lumen acidification","type":"exact"},{"name":"up-regulation of Golgi lumen acidification","type":"exact"},{"name":"upregulation of Golgi lumen acidification","type":"exact"}],"termid":"GO:1905528"}


id: GO:0050977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a chemical stimulus relating to a magnetic field, convert it to a molecular signal, and recognize and characterize the signal. It is believed that organisms such as birds and salamanders use a 'chemical compass': chemical reactions that involve transitions between different spin states can be influenced by magnetic fields and by detecting the different product ratios, these organisms can perceive the direction of the magnetic field. The mechanism by which this is detected is not certain but it may also involve light stimuli.","definition_xrefs":["PMID:15886990","GOC:ai","Wikipedia:Magnetoception"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of chemical stimulus","termid":"GO:0007606"},{"relation_name":"is_a","term_name":"magnetoreception","termid":"GO:0050958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"magnetoreception by sensory perception of chemical stimulus","synonyms":[{"name":"magnetoreception by chemical stimulus","type":"exact"},{"name":"magnetoreception through chemical stimulus","type":"exact"},{"name":"magnetoreception, sensory perception of chemical stimulus","type":"exact"},{"name":"magnetoreception, using chemical stimulus","type":"exact"}],"termid":"GO:0050977"}


id: PATO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in which the bearer is shaped like a narrow band; ligulate.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strap-shaped","termid":"PATO:0002430"}


id: GO:0047634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaroyl-CoA + agmatine = N-(4-guanidiniumylbutyl)-4-hydroxycinnamamide + CoA + H+.","definition_xrefs":["RHEA:13405","EC:2.3.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"agmatine N4-coumaroyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01617","MetaCyc:AGMATINE-N4-COUMAROYLTRANSFERASE-RXN"],"synonyms":[{"name":"4-coumaroyl-CoA:agmatine 4-N-coumaroyltransferase activity","type":"related"},{"name":"4-coumaroyl-CoA:agmatine N4-coumaroyltransferase activity","type":"related"},{"name":"agmatine coumaroyltransferase activity","type":"related"},{"name":"p-coumaroyl-CoA-agmatine N-p-coumaroyltransferase activity","type":"related"}],"termid":"GO:0047634"}


id: GO:0006743
data:
  {"annotated_genes":["SJAG_01865","SJAG_00459","SJAG_00721","SJAG_00933","SJAG_01672","SJAG_01866","SJAG_01668","SJAG_04223","SJAG_04642","SJAG_01820","SJAG_01043","SJAG_06603","SJAG_04568","SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115008,119166],"is_not":false,"summary":null,"term":"GO:0006743"},{"annotations":[88978],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904775"},{"annotations":[119168,73918,78503,87497,76413,72257,63761,72807,73646,74052,78948,119167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006744"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ubiquinone, a lipid-soluble electron-transporting coenzyme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinone metabolic process","termid":"GO:1901661"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_04000":null,"SJAG_04223":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ubiquinone metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"PMID:29191091":null},"synonyms":[{"name":"coenzyme Q metabolic process","type":"exact"},{"name":"coenzyme Q metabolism","type":"exact"},{"name":"ubiquinone metabolism","type":"exact"}],"termid":"GO:0006743","terms_by_termid":{"GO:0006743":null,"GO:0006744":null,"GO:1904775":null}}


id: PBO:0047303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanyl-tRNA synthetase subunit alpha","termid":"PBO:0047303"}


id: PBO:0043538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 6","termid":"PBO:0043538"}


id: PBO:0060916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 3","termid":"PBO:0060916"}


id: GO:0004170
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79268],"is_not":false,"summary":null,"term":"GO:0004170"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dUTP + H2O = dUMP + H+ + diphosphate.","definition_xrefs":["RHEA:10248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0047429","GO:0016787"],"is_obsolete":false,"name":"dUTP diphosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.6.1.23","MetaCyc:DUTP-PYROP-RXN","Reactome:R-HSA-73666","KEGG_REACTION:R02100"],"synonyms":[{"name":"dUTP nucleotidohydrolase activity","type":"related"},{"name":"dUTP pyrophosphatase activity","type":"exact"},{"name":"dUTPase activity","type":"related"},{"name":"deoxyuridine-triphosphatase activity","type":"related"},{"name":"desoxyuridine 5'-triphosphatase activity","type":"related"},{"name":"desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"related"}],"termid":"GO:0004170","terms_by_termid":{"GO:0004170":null}}


id: GO:1901356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-D-galactofuranose.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose metabolic process","termid":"GO:0006012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"beta-D-galactofuranose metabolic process","synonyms":[{"name":"beta-D-galactofuranose metabolism","type":"exact"}],"termid":"GO:1901356"}


id: MONDO:0033981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete krt1-related diffuse nonepidermolytic keratoderma (obsolete MONDO:0033981)","termid":"MONDO:0033981","xrefs":{"Monarch":{"xref_id":"0033981"}}}


id: MONDO:0003810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of bladder adenocarcinoma characterized by the presence of malignant glandular epithelial cells and clear cells forming a diffuse pattern.","definition_xrefs":["NCIT:C39849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder clear cell adenocarcinoma","termid":"MONDO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder diffuse clear cell adenocarcinoma","secondary_identifiers":["DOID:6210","MEDGEN:267058","UMLS:C1511187"],"synonyms":[{"name":"bladder diffuse clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0003810","xrefs":{"Monarch":{"xref_id":"0003810"}}}


id: GO:1901534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hematopoietic progenitor cell differentiation.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"positively_regulates","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hematopoietic progenitor cell differentiation","synonyms":[{"name":"activation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"activation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"activation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"activation of hemopoietic progenitor cell differentiation","type":"narrow"},{"name":"positive regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"positive regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"positive regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"up regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"up regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"up regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"up regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"up-regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"up-regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"up-regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"up-regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"upregulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"upregulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"upregulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"upregulation of hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:1901534"}


id: MOD:00282
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-selenyl-L-cysteine.","definition_xrefs":["RESID:AA0277","PubMed:11827487","PubMed:14594807","Unimod:423#C","PubMed:12716131","PubMed:10430865","PubMed:10966817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium containing residue","termid":"MOD:00745"},{"relation_name":"is_a","term_name":"residues isobaric at 182.9-183.0 Da","termid":"MOD:00778"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-selenyl-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(selanylsulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-hydroselenosulfidopropanoic acid","type":"exact"},{"name":"2-amino-3-hydroselenylsulfidopropanoic acid","type":"exact"},{"name":"2-amino-3-hydroselenylthiopropanoic acid","type":"exact"},{"name":"ACT_SITE S-selanylcysteine intermediate","type":"exact"},{"name":"Delta:Se(1)","type":"related"},{"name":"MOD_RES S-selenylcysteine","type":"exact"},{"name":"S-selanyl-L-cysteine","type":"exact"},{"name":"S-selanylcysteine","type":"exact"},{"name":"S-selenylcysteine","type":"exact"},{"name":"cysteine perselenide","type":"related"},{"name":"selenyl","type":"related"}],"termid":"MOD:00282"}


id: MONDO:0008205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated patella aplasia-hypoplasia is an extremely rare genetic condition characterized by congenital absence or marked reduction of the patellar bone described in only a few families to date.","definition_xrefs":["Orphanet:86789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"patella aplasia/hypoplasia","secondary_identifiers":["OMIM:168860","MESH:C535568","icd11.foundation:88577362","MEDGEN:358246","GARD:8709","UMLS:C1868577"],"synonyms":[{"name":"PTLAH","type":"exact"},{"name":"absent patella","type":"related"},{"name":"familial absence of the patella","type":"related"},{"name":"familial aplasia of the patella (subtype)","type":"related"},{"name":"patella aplasia or hypoplasia","type":"exact"},{"name":"patella aplasia-hypoplasia","type":"related"}],"termid":"MONDO:0008205","xrefs":{"Monarch":{"xref_id":"0008205"}}}


id: PBO:0078727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 3-1","termid":"PBO:0078727"}


id: PBO:0044807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 105B","termid":"PBO:0044807"}


id: GO:0070576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of C-24 of any form of vitamin D.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:15546903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"vitamin D 24-hydroxylase activity","synonyms":[{"name":"calciferol 24-hydroxylase activity","type":"narrow"},{"name":"cholecalciferol 24-hydroxylase activity","type":"narrow"},{"name":"ergocalciferol 24-hydroxylase activity","type":"narrow"},{"name":"vitamin D2 24-hydroxylase activity","type":"narrow"},{"name":"vitamin D3 24-hydroxylase activity","type":"narrow"}],"termid":"GO:0070576"}


id: PBO:0027421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_5'-3'_exonucleolytic_mRNA_catabolic_process","termid":"PBO:0027421"}


id: PBO:0067702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 10","termid":"PBO:0067702"}


id: MONDO:0008814
data:
  {"annotated_genes":["SJAG_03398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85507],"is_not":false,"summary":null,"term":"MONDO:0008814"}]},"cv_name":"mondo","definition":"Arginase deficiency is a rare autosomal recessive amino acid metabolism disorder characterized clinically by variable degrees of hyperammonemia, developing from about 3 years of age, and leading to progressive loss of developmental milestones and spasticity in the absence of treatment.","definition_xrefs":["Orphanet:90"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"hyperargininemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C84568","NANDO:1200807","UMLS:C0268548","NANDO:2200482","OMIM:207800","MEDGEN:78688","icd11.foundation:1619102598","DOID:9278","MedDRA:10062695","MESH:D020162","GARD:5840","SCTID:23501004"],"synonyms":[{"name":"Arg1 deficiency","type":"related"},{"name":"arginase deficiency","type":"exact"},{"name":"argininemia","type":"exact"},{"name":"deficiency of canavanase","type":"exact"},{"name":"hyperargininemia","type":"exact"}],"termid":"MONDO:0008814","terms_by_termid":{"MONDO:0008814":null},"xrefs":{"Monarch":{"xref_id":"0008814"}}}


id: FYPO:0002906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of splicing of antisense RNA primary transcripts is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA splicing","termid":"FYPO:0002916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased antisense primary transcript splicing","synonyms":[{"name":"increased antisense primary transcript RNA splicing","type":"exact"},{"name":"increased antisense primary transcript splicing during mitotic cell cycle","type":"related"},{"name":"increased antisense primary transcript splicing during vegetative growth","type":"exact"},{"name":"increased antisense primary transcript splicing, via transesterification reactions with bulged adenosine as nucleophile","type":"exact"}],"termid":"FYPO:0002906"}


id: GO:0043875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxobutanoate + coenzyme A = propionyl-CoA + formate.","definition_xrefs":["PMID:9484901","RHEA:28054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-ketobutyrate formate-lyase activity","secondary_identifiers":["MetaCyc:KETOBUTFORMLY-RXN"],"synonyms":[{"name":"KFL","type":"exact"},{"name":"TdcE","type":"related"},{"name":"keto-acid formate acetyltransferase","type":"broad"}],"termid":"GO:0043875"}


id: MONDO:0019060
data:
  {"annotated_genes":["SJAG_01013","SJAG_01349","SJAG_03905","SJAG_05979","SJAG_02855","SJAG_01151","SJAG_03881","SJAG_04287","SJAG_03453","SJAG_03429","SJAG_01748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87004,87005,87003,87158,87159,87006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[85964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[85131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[86529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[86588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007205"},{"annotations":[85466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[85467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"}]},"cv_name":"mondo","definition":"A benign, intermediate, or malignant neoplasm involving the bone or articular cartilage.","definition_xrefs":["NCIT:C9343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01151":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_02855":null,"SJAG_03429":null,"SJAG_03453":null,"SJAG_03881":null,"SJAG_03905":null,"SJAG_04287":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"bone neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:C40-C41","MEDGEN:488993","ONCOTREE:BONE","Orphanet:68411","EFO:0003820","UMLS:C2732838","GARD:18892"],"synonyms":[{"name":"bone neoplasm","type":"exact"},{"name":"bone neoplasms","type":"exact"},{"name":"bone tissue neoplasm","type":"exact"},{"name":"bone tissue tumor","type":"exact"},{"name":"bone tissue tumour","type":"exact"},{"name":"bone tumor","type":"exact"},{"name":"bone tumors","type":"exact"},{"name":"bone tumour","type":"exact"},{"name":"bone tumours","type":"exact"},{"name":"neoplasm of bone","type":"exact"},{"name":"neoplasm of bone tissue","type":"exact"},{"name":"neoplasm of the bone","type":"exact"},{"name":"osseous neoplasm","type":"exact"},{"name":"osseous tumor","type":"exact"},{"name":"osseous tumour","type":"exact"},{"name":"primary bone cancer","type":"related"},{"name":"primary malignant neoplasm of bone","type":"related"},{"name":"rare bone tumor","type":"related"},{"name":"rare bone tumour","type":"related"},{"name":"tumor of bone","type":"exact"},{"name":"tumor of bone tissue","type":"exact"},{"name":"tumor of the bone","type":"exact"},{"name":"tumour of bone","type":"exact"},{"name":"tumour of bone tissue","type":"exact"},{"name":"tumour of the bone","type":"exact"}],"termid":"MONDO:0019060","terms_by_termid":{"MONDO:0002629":null,"MONDO:0007205":null,"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0009050":null,"MONDO:0010621":null,"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0019060"}}}


id: PR:P87142
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssz1 gene.","definition_xrefs":["UniProtKB:P87142","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 70 homolog C57A7.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.12","synonyms":[{"name":"Spom972h-ssz1","type":"exact"}],"termid":"PR:P87142"}


id: SO:0000972
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000972 RNA_replication_mode (obsolete SO:0000972)","synonyms":[{"name":"RNA replication mode","type":"exact"}],"termid":"SO:0000972"}


id: PBO:0084179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone acetyltransferase (HAT) catalytic subunit of the SAS complex; acetylates free histones and nucleosomes and regulates transcriptional silencing; member of the MYSTacetyltransferase family; other members are Sas4p and Sas5p","termid":"PBO:0084179"}


id: PATO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pressure which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"pressure","termid":"PATO:0001025"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased pressure","synonyms":[{"name":"low pressure","type":"exact"}],"termid":"PATO:0001575"}


id: FYPO:0005389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rqh1 accumulates is greater than normal during a cellular response to ionizing radiation.","definition_xrefs":["PMID:12023299","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rqh1 foci during cellular response to ionizing radiation","synonyms":[{"name":"increased number of Rqh1 foci during cellular response to IR","type":"exact"},{"name":"increased number of Rqh1 foci during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased number of Rqh1 foci during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0005389"}


id: PBO:0017939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cactin, spliceosome complex subunit","termid":"PBO:0017939"}


id: MONDO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal deposit","secondary_identifiers":["ICD10CM:H18.0","icd11.foundation:1760427912","MEDGEN:511537","SCTID:74460005","UMLS:C0162281","ICD9:371.10","DOID:11547"],"synonyms":[{"name":"deposits - cornea","type":"exact"}],"termid":"MONDO:0001308","xrefs":{"Monarch":{"xref_id":"0001308"}}}


id: MONDO:0000822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphoproliferative syndrome (obsolete MONDO:0000822)","termid":"MONDO:0000822","xrefs":{"Monarch":{"xref_id":"0000822"}}}


id: PBO:0085260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral peroxisomal membrane protein; involved in controlling peroxisome size and number, interacts with Pex25p; PEX27 has a paralog, PEX25, that arose from the whole genome duplication","termid":"PBO:0085260"}


id: PBO:0067966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 268","termid":"PBO:0067966"}


id: GO:0035283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of the central nervous system into a series of semi-repetitive parts or segments.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system segmentation","termid":"GO:0035283"}


id: GO:0090091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix disassembly","termid":"GO:0010715"},{"relation_name":"is_a","term_name":"positive regulation of extracellular matrix organization","termid":"GO:1903055"},{"relation_name":"positively_regulates","term_name":"extracellular matrix disassembly","termid":"GO:0022617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular matrix disassembly","termid":"GO:0090091"}


id: PBO:0054903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2317","termid":"PBO:0054903"}


id: MOD:01629
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms cyclo[(prolylserin)-O-yl] cysteinate by the natural process of cross-linking an L-cysteine residue an L-proline residue, and an L-serine residue, or by effectively modifying a cysteine residue.","definition_xrefs":["PubMed:7961166","RESID:AA0489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cyclo[(prolylserin)-O-yl] cysteinate","synonyms":[{"name":"(3,6-dioxopyrrolo[4,5-a]piperazin-2-yl)methyl cysteinate","type":"exact"},{"name":"MOD_RES Cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"},{"name":"[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]methyl (2R)-2-amino-3-sulfanylpropanoate","type":"exact"},{"name":"cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"}],"termid":"MOD:01629"}


id: MOD:00831
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetylaminoglucosyl)-L-asparagine.","definition_xrefs":["RESID:AA0151#var","PubMed:5490222","PubMed:1694179","PubMed:111247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"N4-(N-acetylamino)hexosyl-L-asparagine","termid":"MOD:01674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-(N-acetylamino)glucosyl-L-asparagine","synonyms":[{"name":"CARBOHYD N-linked (GlcNAc) asparagine","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"N4GlcNAcAsn","type":"exact"}],"termid":"MOD:00831"}


id: PBO:0087590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; mutation is functionally complemented by human ARPC4","termid":"PBO:0087590"}


id: GO:0004620
data:
  {"annotated_genes":["SJAG_01519","SJAG_02161","SJAG_01198","SJAG_02093","SJAG_02091","SJAG_03204","SJAG_04323","SJAG_02100","SJAG_04292","SJAG_00321","SJAG_04110","SJAG_00199","SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75617,77787],"is_not":false,"summary":null,"term":"GO:0004620"},{"annotations":[67337,65776,70423,93718,113851,64803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004622"},{"annotations":[108618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"},{"annotations":[97566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034479"},{"annotations":[72433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004435"},{"annotations":[70788,77098,78353,76305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004623"},{"annotations":[74126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004630"},{"annotations":[63060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004767"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a glycerophospholipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_00321":null,"SJAG_01198":null,"SJAG_01219":null,"SJAG_01519":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_03204":null,"SJAG_04110":null,"SJAG_04292":null,"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phospholipase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6792445","Reactome:R-HSA-6786650"],"termid":"GO:0004620","terms_by_termid":{"GO:0004435":null,"GO:0004620":null,"GO:0004622":null,"GO:0004623":null,"GO:0004630":null,"GO:0004767":null,"GO:0034479":null,"GO:0052714":null}}


id: GO:0045796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of uptake of cholesterol into the blood by absorption from the intestine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intestinal cholesterol absorption","termid":"GO:0030300"},{"relation_name":"is_a","term_name":"negative regulation of intestinal lipid absorption","termid":"GO:1904730"},{"relation_name":"negatively_regulates","term_name":"intestinal cholesterol absorption","termid":"GO:0030299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal cholesterol absorption","synonyms":[{"name":"down regulation of cholesterol absorption","type":"exact"},{"name":"down-regulation of cholesterol absorption","type":"exact"},{"name":"downregulation of cholesterol absorption","type":"exact"},{"name":"inhibition of cholesterol absorption","type":"narrow"}],"termid":"GO:0045796"}


id: MONDO:0020841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with cerebellar atrophy and with or without seizures","secondary_identifiers":["UMLS:C4748032","OMIM:618056","MEDGEN:1648373"],"synonyms":[{"name":"NEDCAS","type":"exact"},{"name":"neurodevelopmental disorder with cerebellar atrophy and with or without seizures","type":"exact"}],"termid":"MONDO:0020841","xrefs":{"Monarch":{"xref_id":"0020841"}}}


id: GO:0005133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type II interferon receptor. Type II interferon is also known as interferon-gamma.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type II interferon receptor binding","synonyms":[{"name":"interferon-gamma","type":"narrow"},{"name":"interferon-gamma receptor binding","type":"exact"},{"name":"interferon-gamma receptor ligand","type":"narrow"}],"termid":"GO:0005133"}


id: MONDO:0005968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The commonest and least serious of the deep mycoses, characterized by nodular lesions of the cutaneous and subcutaneous tissues. It is caused by inhalation of contaminated dust or by infection of a wound.","definition_xrefs":["MESH:D013174"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"primary systemic mycosis","termid":"MONDO:0000308"},{"relation_name":"excluded_subClassOf","term_name":"dermatomycosis","termid":"MONDO:0002040"},{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporotrichosis","secondary_identifiers":["ICD9:117.1","MEDGEN:21298","UMLS:C0038034","icd11.foundation:579570784","EFO:0007494","Orphanet:826","SCTID:42094007","MedDRA:10041736","DOID:14484","ICD10CM:B42","GARD:7692"],"synonyms":[{"name":"rose gardener's disease","type":"related"}],"termid":"MONDO:0005968","xrefs":{"Monarch":{"xref_id":"0005968"}}}


id: MOD:01909
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue to the 6x(13)C labeled 4-sulfophenyl isothiocyanate adduct, alpha-amino-[(4-sulfophenyl)carbamothioyl] residue.","definition_xrefs":["Unimod:464#N-term","PubMed:11467524","PubMed:16526082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled 4-sulfophenyl isothiocyanate derivatized residue","termid":"MOD:00880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled 4-sulfophenyl isothiocyanate alpha-amino derivatized residue","synonyms":[{"name":"4-sulfophenyl isothiocyanate (Heavy C13)","type":"related"},{"name":"SPITC:13C(6)","type":"related"}],"termid":"MOD:01909"}


id: PBO:0045765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA delta isomerase 1","termid":"PBO:0045765"}


id: GO:0120249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lateral wall of an outer hair cell (OHC) is a unique trilaminate composite consisting of the plasma membrane, an underlying cytoskeletal network containing an actin-spectrin cortical lattice, and an adjacent system of circumferential lamellar organelles known as the subsurface cisternae.","definition_xrefs":["PMID:9412485","GOC:krc","PMID:31920560","PMID:26352669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral wall of outer hair cell","synonyms":[{"name":"OHC lateral wall","type":"related"},{"name":"lateral wall of OHC","type":"related"},{"name":"outer hair cell lateral wall","type":"exact"}],"termid":"GO:0120249"}


id: MONDO:0019603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopenia-myopia-hearing loss-intellectual disability-facial dysmorphism syndrome is characterized by severe hypertelorism, brachycephaly, abnormal ears, sloping shoulders, enamel hypoplasia, osteopaenia with frequent fractures, severe myopia, mild to moderate sensorineural hearing loss and mild intellectual deficit. It has been described in two brothers born to first-cousin parents. No chromosomal anomalies were detected. Transmission appears to be autosomal recessive or X-linked.","definition_xrefs":["Orphanet:91133"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopenia-myopia-hearing loss-intellectual disability-facial dysmorphism syndrome","secondary_identifiers":["MEDGEN:928492","UMLS:C4302823","SCTID:722111004"],"termid":"MONDO:0019603","xrefs":{"Monarch":{"xref_id":"0019603"}}}


id: FYPO:0005476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of filamentous actin measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. The total actin level (globular and filamentous actin) may be normal or abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased filamentous actin level","synonyms":[{"name":"decreased accumulation of filamentous actin in cell","type":"related"},{"name":"decreased cellular F-actin level","type":"exact"},{"name":"decreased cellular filamentous actin level","type":"exact"},{"name":"decreased filamentous actin level during mitotic cell cycle","type":"related"},{"name":"decreased filamentous actin level during vegetative growth","type":"exact"},{"name":"reduced filamentous actin level","type":"exact"}],"termid":"FYPO:0005476"}


id: GO:0070887
data:
  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O:1900039"},{"annotations":[64937,99077,89191,58070,88769,92934,68420,60844,74117],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"},{"annotations":[105324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000749"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"},{"relation_name":"is_a","term_name":"cellular response to 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response to chemical stimulus","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0070887","terms_by_termid":{"GO:0000749":null,"GO:0000750":null,"GO:0010619":null,"GO:0019430":null,"GO:0034599":null,"GO:0035865":null,"GO:0036245":null,"GO:0046294":null,"GO:0061692":null,"GO:0070458":null,"GO:0071244":null,"GO:0071248":null,"GO:0071276":null,"GO:0071277":null,"GO:0071456":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null,"GO:0071500":null,"GO:0071507":null,"GO:0098849":null,"GO:0098869":null,"GO:0110095":null,"GO:0140041":null,"GO:0140114":null,"GO:1900039":null,"GO:1990748":null}}


id: PBO:0012305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 7, Pre10 (predicted)","termid":"PBO:0012305"}


id: GO:0051650
data:
  {"annotated_genes":["SJAG_03938","SJAG_03011","SJAG_01925","SJAG_02320","SJAG_04044","SJAG_00594","SJAG_04391","SJAG_03864","SJAG_03005","SJAG_02166","SJAG_03357","SJAG_04960","SJAG_02651","SJAG_03268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117539,71088],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[118231],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099022"},{"annotations":[113947,65870,90541,99353,101719,88412,117524,60170],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"},{"annotations":[115975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"},{"annotations":[104342,104673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"The directed movement of a vesicle to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00594":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02651":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03268":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04391":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of vesicle localization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment of vesicle localisation","type":"exact"}],"termid":"GO:0051650","terms_by_termid":{"GO:0030050":null,"GO:0047496":null,"GO:0048205":null,"GO:0090522":null,"GO:0099022":null}}


id: FYPO:0007786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell is longer than normal, and progression through the meiotic cell cycle is arrested at the G2/MI phase transition. A cell can elongate when arrested at the G2/MI transition if it overcomes the growth arrest that usually occurs.","definition_xrefs":["PMID:28476936","PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at meiotic G2/MI transition","termid":"FYPO:0007785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"elongated cell with cell cycle arrest at meiotic G2/MI transition","synonyms":[{"name":"elongated cell with abnormal cell cycle arrest at G2/M1 transition","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at meiotic G2/MI phase transition","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at meiotic G2/MI transition","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at meiotic cell cycle G2/MI phase transition","type":"exact"},{"name":"elongated cell with abnormal meiotic cell cycle arrest at G2/MI phase transition","type":"exact"},{"name":"elongated cell with abnormal meiotic cell cycle arrest at G2/MI transition","type":"exact"},{"name":"elongated cells during meiotic G2/M1 arrest","type":"exact"},{"name":"elongated cells during meiotic G2/MI arrest","type":"exact"},{"name":"long cell with cell cycle arrest at meiotic G2/MI transition","type":"exact"}],"termid":"FYPO:0007786"}


id: PBO:0029222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_malate_dehydrogenase_(decarboxylating)_(NAD+)_activity","termid":"PBO:0029222"}


id: GO:0075223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium development","termid":"GO:0075310"},{"relation_name":"regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporangium germination","synonyms":[{"name":"modulation of sporangium germination","type":"narrow"},{"name":"modulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075223"}


id: FYPO:0005394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which vegetative cell population growth is slower than normal for several generations, with the population growth rate decreasing over successive generations, after which the population resumes growing at a normal or near-normal rate.","definition_xrefs":["PomBase:mah","PMID:12196391"],"direct_ancestors":[{"relation_name":"has_part","term_name":"progressively decreasing vegetative cell population growth rate","termid":"FYPO:0005393"},{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"has_part","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"progressively decreasing vegetative cell population growth rate followed by return to normal growth rate","synonyms":[{"name":"emergence of telomerase-deficient survivors","type":"related"},{"name":"progressively decreasing cell population growth rate followed by return to normal growth rate during vegetative growth","type":"exact"},{"name":"progressively decreasing cell population proliferation followed by return to normal proliferation","type":"related"},{"name":"progressively decreasing cell proliferation followed by return to normal proliferation","type":"related"},{"name":"progressively reduced cell proliferation followed by return to normal proliferation","type":"related"},{"name":"progressively reduced vegetative cell population growth rate followed by return to normal growth rate","type":"exact"}],"termid":"FYPO:0005394"}


id: PBO:0070388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin associated tail protein 1 like","termid":"PBO:0070388"}


id: GO:0071007
data:
  {"annotated_genes":["SJAG_04898","SJAG_00414","SJAG_00911","SJAG_04117","SJAG_00859"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71936,77176,77694,77718,79039],"is_not":false,"summary":null,"term":"GO:0071007"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that contains the U2, U5 and U6 snRNPs bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the U2, U5 and U6 snRNPs.","definition_xrefs":["PMID:18322460","PMID:19239890","ISBN:0879697393","GOC:ab","GOC:krc","GOC:mah","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"catalytic step 2 spliceosome","termid":"GO:0071013"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00414":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_04117":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U2-type catalytic step 2 spliceosome","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"GT-AG catalytic step 2 spliceosome","type":"narrow"},{"name":"major catalytic step 2 spliceosome","type":"exact"},{"name":"mammalian U2-type spliceosomal complex C","type":"narrow"},{"name":"mammalian U2-type spliceosomal complex C1","type":"narrow"},{"name":"yeast U2-type spliceosomal complex A2-2","type":"narrow"}],"termid":"GO:0071007","terms_by_termid":{"GO:0071007":null}}


id: PBO:0059718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 26","termid":"PBO:0059718"}


id: PBO:0089499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Nop9","termid":"PBO:0089499"}


id: PBO:0113215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translation release factor RF1; involved in stop codon recognition and hydrolysis of peptidyl-tRNA bond during mitochondrial translation; lack of MRF1 causes mitochondrial genome instability","termid":"PBO:0113215"}


id: PBO:0039307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 2, alpha-ketoglutarate dependent dioxygenase","termid":"PBO:0039307"}


id: GO:2001213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vasculogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of vasculogenesis","termid":"GO:2001212"},{"relation_name":"negatively_regulates","term_name":"vasculogenesis","termid":"GO:0001570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vasculogenesis","synonyms":[{"name":"negative regulation of vascular morphogenesis","type":"exact"}],"termid":"GO:2001213"}


id: GO:0071074
data:
  {"annotated_genes":["SJAG_02390"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71703],"is_not":false,"summary":null,"term":"GO:0071074"}]},"cv_name":"molecular_function","definition":"Binding to eukaryotic initiation factor eIF2, a protein complex involved in the initiation of ribosome-mediated translation.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation initiation factor binding","termid":"GO:0031369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02390":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"eukaryotic initiation factor eIF2 binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0071074","terms_by_termid":{"GO:0071074":null}}


id: SO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000106 non_capped_primary_transcript (obsolete SO:0000106)","termid":"SO:0000106"}


id: PBO:0088178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zeta subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins","termid":"PBO:0088178"}


id: MONDO:0021836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by a malformations of the neck due to a branchial arch defect. In the neonatal period the following signs were noted: symmetrical preauricular pits, retroauricular additional rudimentary auricles, a blindly ending coccygeal groove, microstomia and papillomata of the hypopharynx. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:6468450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aksu von Stockhausen syndrome","secondary_identifiers":["MEDGEN:419676","MESH:C535611","UMLS:C2930949"],"synonyms":[{"name":"aksu von stockhausen syndrome","type":"exact"},{"name":"hereditary branchial arch defects","type":"related"}],"termid":"MONDO:0021836","xrefs":{"Monarch":{"xref_id":"0021836"}}}


id: PBO:0042984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD9 neighbor","termid":"PBO:0042984"}


id: GO:0006266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA ligation (obsolete GO:0006266)","termid":"GO:0006266"}


id: PBO:0083973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-6-phosphate dehydrogenase (G6PD); catalyzes the first step of the pentose phosphate pathway; involved in adapting to oxidative stress; protein abundance increases in response to DNA replication stress; homolog of human G6PD which is deficient in patients with hemolytic anemia; human G6PD can complement yeast zwf1 null mutant","termid":"PBO:0083973"}


id: GO:0001197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mating-type specific process that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mating-type specific transcription from RNA polymerase II promoter (obsolete GO:0001197)","synonyms":[{"name":"activation of transcription from an RNA polymerase II promoter, mating-type specific","type":"narrow"},{"name":"stimulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"narrow"},{"name":"up regulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"},{"name":"up-regulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"},{"name":"upregulation of transcription from an RNA polymerase II promoter, mating-type specific","type":"exact"}],"termid":"GO:0001197"}


id: GO:0051969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"regulates","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transmission of nerve impulse","synonyms":[{"name":"regulation of conduction of nerve impulse","type":"exact"}],"termid":"GO:0051969"}


id: MONDO:0009063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventriculomegaly-cystic kidney disease","secondary_identifiers":["OMIM:219730","GARD:17757","DOID:0111625","Orphanet:443988","UMLS:C1857423","MEDGEN:346584"],"synonyms":[{"name":"VMCKD","type":"exact"},{"name":"congenital nephrosis-cerebral ventriculomegaly syndrome","type":"exact"},{"name":"ventriculomegaly with cystic kidney disease","type":"related"}],"termid":"MONDO:0009063","xrefs":{"Monarch":{"xref_id":"0009063"}}}


id: PBO:0039918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF17 antisense RNA 1","termid":"PBO:0039918"}


id: RO:0002386
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has potential to developmentally induce y iff x developmentally induces y or x is capable of developmentally inducing y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_developmental_potential_involving","termid":"RO:0002384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_potential_to_developmentally_induce","termid":"RO:0002386"}


