# terms

id: PBO:0064336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase family member 5","termid":"PBO:0064336"}


id: MONDO:0024281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of conditions used to describe polyarthritis occurring in children.","definition_xrefs":["NCIT:C26979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyarticular arthritis","termid":"MONDO:0024280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile chronic polyarthritis","secondary_identifiers":["UMLS:C0409667","MEDGEN:140816"],"synonyms":[{"name":"juvenile chronic polyarthritis","type":"exact"}],"termid":"MONDO:0024281","xrefs":{"Monarch":{"xref_id":"0024281"}}}


id: PBO:0042351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD84 pseudogene 1","termid":"PBO:0042351"}


id: PBO:0062188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily P member 4","termid":"PBO:0062188"}


id: GO:0033252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of beta-lactamase activity, the hydrolysis of a beta-lactam to yield a substituted beta-amino acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of beta-lactamase activity","termid":"GO:0033252"}


id: PBO:0040251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 7","termid":"PBO:0040251"}


id: MONDO:0018415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hymenolepiasis (obsolete MONDO:0018415)","termid":"MONDO:0018415","xrefs":{"Monarch":{"xref_id":"0018415"}}}


id: FYPO:0006258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is normal (i.e. indistinguishable from wild type) during prophase.","definition_xrefs":["PomBase:mah","PMID:28455357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rate of mitotic spindle elongation","termid":"FYPO:0004429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal rate of mitotic spindle elongation during prophase","synonyms":[{"name":"normal mitotic spindle elongation rate during prophase","type":"exact"},{"name":"normal rate of mitotic spindle elongation during prophase during vegetative growth","type":"exact"},{"name":"normal rate of spindle elongation during mitotic prophase","type":"exact"},{"name":"normal rate of spindle elongation during prophase of mitosis","type":"exact"}],"termid":"FYPO:0006258"}


id: GO:0070158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling serine to seryl-tRNA in a mitochondrion, catalyzed by seryl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seryl-tRNA aminoacylation","termid":"GO:0006434"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0140053","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"mitochondrial seryl-tRNA aminoacylation","termid":"GO:0070158"}


id: PBO:0084790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins","termid":"PBO:0084790"}


id: PBO:0074970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-12","termid":"PBO:0074970"}


id: GO:0071528
data:
  {"annotated_genes":["SJAG_02661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79423],"is_not":false,"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement from the nucleus to the cytoplasm of a tRNA that was previously exported to the cytoplasm and then imported back into the nucleus. The processes of primary tRNA export and secondary export (re-export) can be distinguished because in organisms in which tRNA splicing occurs in the cytoplasm, the export of a mature tRNA must occur by re-export.","definition_xrefs":["PMID:20032305","PMID:17475781","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA export from nucleus","termid":"GO:0006409"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02661":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"tRNA re-export from nucleus","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"tRNA reexport from nucleus","type":"exact"}],"termid":"GO:0071528","terms_by_termid":{"GO:0071528":null}}


id: PBO:0052112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily B member 2","termid":"PBO:0052112"}


id: MONDO:0003377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from an extrahepatic bile duct. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C5848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct carcinoma","termid":"MONDO:0003090"},{"relation_name":"is_a","term_name":"liver leiomyosarcoma","termid":"MONDO:0003378"},{"relation_name":"is_a","term_name":"extrahepatic bile duct sarcoma","termid":"MONDO:0024658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"extrahepatic bile duct leiomyosarcoma","secondary_identifiers":["DOID:5293","MEDGEN:232481","UMLS:C1333508"],"synonyms":[{"name":"bile duct leiomyosarcoma","type":"exact"},{"name":"extrahepatic bile duct leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of bile duct","type":"exact"},{"name":"leiomyosarcoma of extrahepatic bile duct","type":"exact"},{"name":"leiomyosarcoma of the bile duct","type":"exact"},{"name":"leiomyosarcoma of the extrahepatic bile duct","type":"exact"}],"termid":"MONDO:0003377","xrefs":{"Monarch":{"xref_id":"0003377"}}}


id: PR:P87109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phospholipase DDHD2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00563","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C20G8.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.02","secondary_identifiers":["UniProtKB:P87109"],"synonyms":[{"name":"Spom972h-DDHD2","type":"exact"}],"termid":"PR:P87109"}


id: MONDO:0008267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oral-facial-digital syndrome, type 5 is characterized by median cleft of the upper lip, postaxial polydactyly of hands and feet, and oral manifestations (duplicated frenulum).","definition_xrefs":["Orphanet:2919"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome V","secondary_identifiers":["OMIM:174300","MEDGEN:358131","GARD:4120","MESH:C557819","SCTID:722105002","UMLS:C1868118","DOID:0060375"],"synonyms":[{"name":"OFD syndrome 5","type":"related"},{"name":"OFD5","type":"exact"},{"name":"Ofds 5","type":"related"},{"name":"Thurston syndrome","type":"exact"},{"name":"oral facial digital syndrome 5","type":"related"},{"name":"oral facial digital syndrome type 5","type":"related"},{"name":"oral-Facial-digital syndrome, type 5","type":"related"},{"name":"oral-facial-digital syndrome 5","type":"related"},{"name":"oral-facial-digital syndrome type 5","type":"exact"},{"name":"orofaciodigital syndrome 5","type":"related"},{"name":"orofaciodigital syndrome Thurston type","type":"exact"},{"name":"orofaciodigital syndrome V","type":"exact"},{"name":"orofaciodigital syndrome type 5","type":"exact"},{"name":"orofaciodigital syndrome type V","type":"exact"},{"name":"orofaciodigital syndrome, Thurston type","type":"exact"},{"name":"polydactyly postaxial with median cleft of upper lip","type":"exact"},{"name":"polydactyly, postaxial, with Median cleft of upper lip","type":"related"},{"name":"polydactyly, postaxial, with median cleft of upper lip","type":"exact"}],"termid":"MONDO:0008267","xrefs":{"Monarch":{"xref_id":"0008267"}}}


id: MONDO:0003613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diffuse peritoneal leiomyomatosis (obsolete MONDO:0003613)","termid":"MONDO:0003613","xrefs":{"Monarch":{"xref_id":"0003613"}}}


id: PBO:0062160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 1","termid":"PBO:0062160"}


id: PBO:0071985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 14","termid":"PBO:0071985"}


id: MONDO:0016771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Annular atrophic lichen planus (LP) is a rare variant of cutaneous lichen planus characterized by both annular and atrophic LP features in the same lesion.","definition_xrefs":["Orphanet:254411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"annular atrophic lichen planus","secondary_identifiers":["UMLS:C4304037","MEDGEN:929706","SCTID:720493003","GARD:12676"],"synonyms":[{"name":"annular atrophic LP","type":"exact"}],"termid":"MONDO:0016771","xrefs":{"Monarch":{"xref_id":"0016771"}}}


id: MONDO:0957997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes, deafness, developmental delay, and short stature syndrome","secondary_identifiers":["MEDGEN:1845412","UMLS:C5882732","OMIM:620651"],"termid":"MONDO:0957997","xrefs":{"Monarch":{"xref_id":"0957997"}}}


id: PBO:0061981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AT member 2 pseudogene","termid":"PBO:0061981"}


id: GO:0047093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + quinolin-4-ol = H2O + NAD+ + quinoline-3,4-diol.","definition_xrefs":["EC:1.14.13.62","RHEA:19325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxyquinoline 3-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05154","MetaCyc:1.14.13.62-RXN"],"synonyms":[{"name":"1-H-4-oxoquinoline 3-monooxygenase activity","type":"related"},{"name":"quinolin-4(1H)-one 3-monooxygenase activity","type":"related"},{"name":"quinolin-4(1H)-one,NADH:oxygen oxidoreductase (3-oxygenating)","type":"related"}],"termid":"GO:0047093"}


id: PR:Q10488
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trans-2-enoyl-CoA reductase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02154","PANTHER:PTHR11695:SF15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-2-enoyl-CoA reductase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.04c","secondary_identifiers":["UniProtKB:Q10488"],"synonyms":[{"name":"Spom972h-MECR","type":"exact"}],"termid":"PR:Q10488"}


id: GO:0047349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribitol 5-phosphate + CTP = CDP-ribitol + diphosphate.","definition_xrefs":["EC:2.7.7.40","RHEA:12456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"D-ribitol-5-phosphate cytidylyltransferase activity","secondary_identifiers":["MetaCyc:2.7.7.40-RXN","KEGG_REACTION:R02921"],"synonyms":[{"name":"CDP ribitol pyrophosphorylase activity","type":"related"},{"name":"CDP-ribitol diphosphorylase activity","type":"related"},{"name":"CDP-ribitol pyrophosphorylase activity","type":"related"},{"name":"CTP:D-ribitol-5-phosphate cytidylyltransferase activity","type":"exact"},{"name":"cytidine diphosphate ribitol pyrophosphorylase activity","type":"related"},{"name":"cytidine diphosphoribitol pyrophosphorylase activity","type":"related"},{"name":"ribitol 5-phosphate cytidylyltransferase activity","type":"related"}],"termid":"GO:0047349"}


id: PBO:0055792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase like 2","termid":"PBO:0055792"}


id: MONDO:0017674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease in which focal palmoplantar keratoderma is a major feature..","gene_count":0,"genotype_count":0,"name":"obsolete disease with focal palmoplantar keratoderma as a major feature (obsolete MONDO:0017674)","secondary_identifiers":["Orphanet:307871"],"synonyms":[{"name":"disease with focal palmoplantar hyperkeratosis as a major feature","type":"exact"}],"termid":"MONDO:0017674","xrefs":{"Monarch":{"xref_id":"0017674"}}}


id: PBO:0065370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presenilin 1","termid":"PBO:0065370"}


id: PBO:0062768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily V member 1 pseudogene","termid":"PBO:0062768"}


id: PR:O74690
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snu13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"13 kDa ribonucleoprotein-associated protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.03c","synonyms":[{"name":"Spom972h-snu13","type":"exact"}],"termid":"PR:O74690"}


id: MONDO:0037002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, circumscribed fibroepithelial neoplasm arising from the breast and rarely the prostate gland. It is characterized by the presence of epithelial structures which are arranged in clefts and by a hypercellular mesenchymal stroma which is organized in leaf-like structures. There is no evidence of cellular atypia or sarcomatous features.","definition_xrefs":["NCIT:C4274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllodes tumor","termid":"MONDO:0005078"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign phyllodes tumor","secondary_identifiers":["ICDO:9020/0","MEDGEN:87254","UMLS:C0334501"],"synonyms":[{"name":"benign cystosarcoma phyllodes","type":"exact"},{"name":"benign phyllodes neoplasm","type":"exact"},{"name":"benign phyllodes tumor","type":"exact"},{"name":"phyllodes tumor, benign","type":"exact"}],"termid":"MONDO:0037002","xrefs":{"Monarch":{"xref_id":"0037002"}}}


id: MONDO:0100055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intraosseous spindle cell rhabdomyosarcoma characterized by the fusion of the EWSR1 or FUS gene with the TFCP2 gene, or the MEIS1 gene with the NCOA2 gene.","definition_xrefs":["NCIT:C178236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell rhabdomyosarcoma","termid":"MONDO:0002581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intraosseous spindle cell rhabdomyosarcoma with TFCP2/NCOA2 rearrangements","secondary_identifiers":["UMLS:C5554888","MEDGEN:1791329"],"synonyms":[{"name":"intraosseous rhabdomyosarcoma defined by FUS-TFCP2 fusion","type":"related"},{"name":"intraosseous rhabdomyosarcoma with FUS-TFCP2 fusion","type":"narrow"}],"termid":"MONDO:0100055","xrefs":{"Monarch":{"xref_id":"0100055"}}}


id: PBO:0044396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 56, pseudogene","termid":"PBO:0044396"}


id: GO:0039703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular metabolic process in which a cell duplicates one or more molecules of RNA.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA replication","termid":"GO:0039703"}


id: GO:0018998
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete metaxin (obsolete GO:0018998)","synonyms":[{"name":"metaxin","type":"exact"}],"termid":"GO:0018998"}


id: GO:0051221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of tungsten into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tungsten incorporation into metallo-sulfur cluster (obsolete GO:0051221)","synonyms":[{"name":"tungsten incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0051221"}


id: GO:0071445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to protein stimulus (obsolete GO:0071445)","synonyms":[{"name":"cellular response to protein stimulus","type":"exact"}],"termid":"GO:0071445"}


id: GO:0008034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein binding (obsolete GO:0008034)","synonyms":[{"name":"lipoprotein binding","type":"exact"}],"termid":"GO:0008034"}


id: PBO:0054381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1777","termid":"PBO:0054381"}


id: GO:1903260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mating projection tip.","definition_xrefs":["PMID:11952834","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to mating projection tip","synonyms":[{"name":"protein localisation in mating projection tip","type":"exact"},{"name":"protein localisation to mating projection tip","type":"exact"},{"name":"protein localization in mating projection tip","type":"exact"},{"name":"protein localization to conjugation tube tip","type":"narrow"},{"name":"protein localization to shmoo tip","type":"narrow"}],"termid":"GO:1903260"}


id: MONDO:0800299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy, congenital, with excess of muscle spindles","secondary_identifiers":["MEDGEN:369344","UMLS:C1968782"],"synonyms":[{"name":"CMEMS","type":"exact"}],"termid":"MONDO:0800299","xrefs":{"Monarch":{"xref_id":"0800299"}}}


id: PBO:0004987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M20 protein","termid":"PBO:0004987"}


id: PBO:0090432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH kinase Pos5","termid":"PBO:0090432"}


id: GO:0044652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to a host endothelial cell via adhesion molecules, general stickiness etc., either directly or indirectly.","definition_xrefs":["GOC:jl","PMID:10066176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host endothelial cell","termid":"GO:0044652"}


id: FYPO:0007028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the septin ring at the medial cortex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to medial cortex septin ring during vegetative growth","synonyms":[{"name":"normal protein localisation to medial cortex septin ring during vegetative growth","type":"exact"},{"name":"normal protein localization to medial cortex septin ring during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007028"}


id: PBO:0049327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIE subunit 1","termid":"PBO:0049327"}


id: FYPO:0005440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is swollen, is elongated, and in which the nucleus is larger than normal. The cell contains one nucleus and no septum. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PMID:12653962","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"enlarged nucleus during vegetative growth","termid":"FYPO:0000344"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0002403","FYPO:0005447","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"name":"swollen elongated cell with enlarged nucleus","synonyms":[{"name":"elongated cell with enlarged nucleus and increased cell volume","type":"exact"},{"name":"enlarged elongated cell with enlarged nucleus","type":"related"},{"name":"large elongated cell with enlarged nucleus","type":"related"},{"name":"swollen elongated mononucleate aseptate cell with enlarged nucleus","type":"exact"},{"name":"swollen elongated vegetative cell with enlarged nucleus","type":"exact"}],"termid":"FYPO:0005440"}


id: PBO:0073238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 2","termid":"PBO:0073238"}


id: PBO:0038788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase 2","termid":"PBO:0038788"}


id: MONDO:0850149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A kidney benign neoplasm that is located in the kidney cortex.","definition_xrefs":["DOID:0080615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephroma","termid":"MONDO:0850149","xrefs":{"Monarch":{"xref_id":"0850149"}}}


id: MONDO:0002268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncomfortable, often painful feeling in the stomach, resulting from impaired digestion. Symptoms include burning stomach pain, bloating, heartburn, nausea, and vomiting. Causes include gastritis, gastric ulcer, gastroesophageal reflux disease, pancreatic disease, and gallbladder disease.","definition_xrefs":["NCIT:C26756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functional gastric disease","termid":"MONDO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"dyspepsia","secondary_identifiers":["DOID:2321","EFO:0008533","MESH:D004415","UMLS:C0013395","icd11.foundation:869622187","MEDGEN:41681"],"synonyms":[{"name":"dyspepsia, indigestion","type":"exact"},{"name":"indigestion","type":"exact"}],"termid":"MONDO:0002268","xrefs":{"Monarch":{"xref_id":"0002268"}}}


id: GO:1904773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tetrachloromethane stimulus.","definition_xrefs":["PMID:7852267","GO_REF:0000071","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to tetrachloromethane (obsolete GO:1904773)","synonyms":[{"name":"cellular response to CCL4","type":"exact"},{"name":"cellular response to carbon tetrachloride","type":"exact"}],"termid":"GO:1904773"}


id: PBO:0075231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 5 pseudogene 1","termid":"PBO:0075231"}


id: GO:2000287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myotome development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of myotome development","termid":"GO:2000290"},{"relation_name":"positively_regulates","term_name":"myotome development","termid":"GO:0061055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myotome development","termid":"GO:2000287"}


id: PBO:0028804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0028804"}


id: PBO:0043218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic linker associated protein 2","termid":"PBO:0043218"}


id: PBO:0077014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS2 antisense RNA 1","termid":"PBO:0077014"}


id: PBO:0042362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD151 molecule (Raph blood group)","termid":"PBO:0042362"}


id: PBO:0046999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A2, pseudogene","termid":"PBO:0046999"}


id: FYPO:0002585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature mitochondrial transfer RNA (tRNA) measured in a cell is too low to detect. Total tRNA or a specific tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature mitochondrial tRNA level","termid":"FYPO:0002584"},{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"mature mitochondrial tRNA absent from cell","synonyms":[{"name":"mature mitochondrial tRNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mature mitochondrial tRNA absent from cell during vegetative growth","type":"exact"},{"name":"mature mitochondrial tRNA transcripts absent from cell","type":"exact"},{"name":"mature mitochondrial transfer RNA absent from cell","type":"exact"},{"name":"mitochondrial tRNA absent from cell","type":"broad"},{"name":"undetectable mature mitochondrial tRNA level","type":"exact"}],"termid":"FYPO:0002585"}


id: PBO:0061973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AL member 1 pseudogene","termid":"PBO:0061973"}


id: PBO:0028812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity","termid":"PBO:0028812"}


id: MONDO:1011788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myopathy of obturator-externus, non-human animal","secondary_identifiers":["OMIA:000265"],"termid":"MONDO:1011788","xrefs":{"Monarch":{"xref_id":"1011788"}}}


id: GO:0034640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mitochondrion by attachment to a microtubule, followed by elongation of the microtubule by tubulin polymerization.","definition_xrefs":["GOC:mah","PMID:12972644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of mitochondrion localization, microtubule-mediated","termid":"GO:0034643"},{"relation_name":"is_a","term_name":"microtubule polymerization based movement","termid":"GO:0099098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of mitochondrion localization by microtubule attachment","synonyms":[{"name":"establishment of mitochondrion localisation by microtubule attachment","type":"exact"},{"name":"mitochondrial localization by microtubule attachment","type":"exact"},{"name":"mitochondrial migration by microtubule attachment","type":"exact"},{"name":"mitochondrion migration by microtubule attachment","type":"exact"}],"termid":"GO:0034640"}


id: GO:0031855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an oxytocin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"oxytocin receptor binding","synonyms":[{"name":"oxytocin receptor ligand","type":"narrow"}],"termid":"GO:0031855"}


id: GO:0018769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-6-oxoocta-2,4-dienoate + H2O = H+ + propanoate + cis-2-hydroxypenta-2,4-dienoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-6-oxoocta-2,4-dienoate hydrolase activity (obsolete GO:0018769)","termid":"GO:0018769"}


id: PBO:0110456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional corepressor for ribosomal proteins via TOR signaling pathway Ifh1","termid":"PBO:0110456"}


id: GO:0061217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of mesonephros development. Mesonephros development is the process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is an endocrine and metabolic organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"regulates","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesonephros development","termid":"GO:0061217"}


id: GO:0015047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + 2 ferricytochrome c2 = NADP+ + 2 ferrocytochrome c2.","definition_xrefs":["EC:1.6.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NADPH-cytochrome-c2 reductase activity","secondary_identifiers":["MetaCyc:NADPH--CYTOCHROME-C2-REDUCTASE-RXN","RHEA:15237"],"synonyms":[{"name":"NADPH:ferricytochrome-c2 oxidoreductase activity","type":"related"},{"name":"cytochrome c2 reductase (reduced nicotinamide adinine dinucleotide phosphate, NADPH)","type":"related"},{"name":"reductase, cytochrome c2 (reduced nicotinamide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0015047"}


id: FYPO:0004282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of xanthine DNA N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal xanthine DNA N-glycosylase activity","termid":"FYPO:0004281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased xanthine DNA N-glycosylase activity","synonyms":[{"name":"reduced xanthine DNA N-glycosylase activity","type":"exact"}],"termid":"FYPO:0004282"}


id: PBO:0043429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 1","termid":"PBO:0043429"}


id: MONDO:0859598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute erythroid leukemia characterized by the presence of at least 50% erythroid precursors and at least 20% myeloblasts in the bone marrow.","definition_xrefs":["DOID:0080916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute erythroid leukemia","termid":"MONDO:0017858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"erythroleukemia","secondary_identifiers":["MEDGEN:1614281","NCIT:C7152","UMLS:C4520840"],"termid":"MONDO:0859598","xrefs":{"Monarch":{"xref_id":"0859598"}}}


id: MONDO:0004330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma arising from the leptomeninges.","definition_xrefs":["NCIT:C8312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant leptomeningeal tumor","termid":"MONDO:0003762"},{"relation_name":"is_a","term_name":"meningeal sarcoma","termid":"MONDO:0004308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"leptomeningeal sarcoma","secondary_identifiers":["MEDGEN:235139","UMLS:C1384416","DOID:7689"],"synonyms":[{"name":"leptomeningeal sarcoma","type":"exact"},{"name":"leptomeninges sarcoma","type":"related"},{"name":"leptomeninx sarcoma","type":"exact"},{"name":"sarcoma of leptomeninges","type":"exact"},{"name":"sarcoma of leptomeninx","type":"exact"},{"name":"sarcoma of the leptomeninges","type":"exact"},{"name":"sarcoma, leptomeningeal, malignant","type":"exact"},{"name":"sarcoma, meningeal","type":"exact"}],"termid":"MONDO:0004330","xrefs":{"Monarch":{"xref_id":"0004330"}}}


id: PBO:0038637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 2","termid":"PBO:0038637"}


id: PBO:0048560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF family receptor alpha like","termid":"PBO:0048560"}


id: GO:0043941
data:
  {"annotated_genes":["SJAG_02169","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[90521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the formation of cellular spores derived from the products of meiosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"is_a","term_name":"positive regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0045881"},{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"positively_regulates","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043941","terms_by_termid":{"GO:0075296":null,"GO:1903024":null}}


id: PBO:0028864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pre-mRNA_level","termid":"PBO:0028864"}


id: GO:0051484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway that contributes to terpenoid biosynthesis. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","termid":"GO:0019288"},{"relation_name":"part_of","term_name":"terpenoid biosynthetic process, mevalonate-independent","termid":"GO:0051483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process","synonyms":[{"name":"isopentenyl diphosphate anabolism, mevalonate-independent pathway, during terpenoid anabolism","type":"related"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway involved in terpenoid biosynthetic process","type":"related"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, during terpenoid biosynthetic process","type":"related"},{"name":"isopentenyl diphosphate formation, mevalonate-independent pathway, during terpenoid biosynthesis","type":"related"},{"name":"isopentenyl diphosphate formation, mevalonate-independent pathway, during terpenoid formation","type":"related"},{"name":"isopentenyl diphosphate synthesis, mevalonate-independent pathway, during terpenoid synthesis","type":"related"}],"termid":"GO:0051484"}


id: GO:0017133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the mitochondrion. It contains flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the mitochondrial electron transport system.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer flavoprotein complex","termid":"GO:0045251"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial electron transfer flavoprotein complex","termid":"GO:0017133"}


id: PBO:0113451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of EGO/GSE complex; vacuolar/endosomal membrane-associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from endosome to plasma membrane; essential for integrity and function of EGO; targeted to vacuole via AP-3 pathway; gene exhibits synthetic genetic interaction with MSS4","termid":"PBO:0113451"}


id: GO:1903258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which sorbose is transported from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","GOC:TermGenie","PMID:2878925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose import across plasma membrane","termid":"GO:0140271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"sorbose import across plasma membrane","synonyms":[{"name":"sorbose import into cell","type":"exact"}],"termid":"GO:1903258"}


id: PR:Q9USL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18B5.09c gene.","definition_xrefs":["UniProtKB:Q9USL2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.09c","synonyms":[{"name":"Spom972h-SPCC18B5.09c","type":"exact"}],"termid":"PR:Q9USL2"}


id: GO:0060151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a peroxisome is transported to, and/or maintained in, a specific location. A peroxisome is a small membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.","definition_xrefs":["PMID:16449325","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"peroxisome localization","synonyms":[{"name":"peroxisome localisation","type":"exact"}],"termid":"GO:0060151"}


id: PBO:0076460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TALAM1 transcript, MALAT1 antisense RNA","termid":"PBO:0076460"}


id: PBO:0004427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC-50 family protein","termid":"PBO:0004427"}


id: MOD:01752
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cysTMT6plex-130 reporter+balance reagent cysteine disulfide","termid":"MOD:01827"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01752"}


id: MOD:00573
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:353","PubMed:15174056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized lysine biotinylated with biotin hydrazide","synonyms":[{"name":"Lysbiotinhydrazide","type":"related"},{"name":"oxidized Lysine biotinylated with biotin hydrazide","type":"related"}],"termid":"MOD:00573"}


id: MONDO:0018605
data:
  {"annotated_genes":["SJAG_02297","SJAG_03934","SJAG_04263","SJAG_00070"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[86447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012073"},{"annotations":[86415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011624"},{"annotations":[85912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014881"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_02297":null,"SJAG_03934":null,"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"disorders of pentose/polyol metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21841","Orphanet:440701","MEDGEN:1843151","UMLS:C5681188"],"termid":"MONDO:0018605","terms_by_termid":{"MONDO:0010480":null,"MONDO:0011624":null,"MONDO:0012073":null,"MONDO:0014881":null},"xrefs":{"Monarch":{"xref_id":"0018605"}}}


id: GO:0050092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-tartrate + NAD+ = dihydroxyfumarate + H+ + NADH.","definition_xrefs":["EC:1.3.1.7","RHEA:18553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"meso-tartrate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02544","MetaCyc:MESO-TARTRATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"meso-tartrate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050092"}


id: MONDO:0957536
data:
  {"annotated_genes":["SJAG_00741"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86162],"is_not":false,"summary":null,"term":"MONDO:0957536"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00741":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 73","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620450","UMLS:C5830636","MEDGEN:1841272"],"termid":"MONDO:0957536","terms_by_termid":{"MONDO:0957536":null},"xrefs":{"Monarch":{"xref_id":"0957536"}}}


id: PR:Q9C0X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB8E5.10 gene.","definition_xrefs":["UniProtKB:Q9C0X5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB8E5.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.10","synonyms":[{"name":"Spom972h-SPAPB8E5.10","type":"exact"}],"termid":"PR:Q9C0X5"}


id: PBO:0042589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 2","termid":"PBO:0042589"}


id: MONDO:0019498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Tunga penetrans.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic ectoparasitic infectious disease","termid":"MONDO:0002875"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tungiasis","secondary_identifiers":["DOID:0050266","Orphanet:879","SCTID:64612002","EFO:1001445","UMLS:C0277356","MEDGEN:78823","icd11.foundation:2076748409","MESH:D058285","GARD:393","ICD9:134.1"],"synonyms":[{"name":"S penetrans","type":"related"},{"name":"Sarcopsylla penetrans","type":"related"},{"name":"T penetrans","type":"related"},{"name":"Tunga penetrans","type":"related"},{"name":"Tunga penetrans caused disease or disorder","type":"exact"},{"name":"Tunga penetrans disease or disorder","type":"exact"},{"name":"Tunga penetrans infectious disease","type":"exact"},{"name":"chigger flea","type":"related"}],"termid":"MONDO:0019498","xrefs":{"Monarch":{"xref_id":"0019498"}}}


id: RO:0002637
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of mesoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_mesoparasite","termid":"RO:0002637"}


id: FYPO:0004043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains four nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"tetranucleate vegetative cell","synonyms":[{"name":"tetranucleate cells during vegetative growth","type":"exact"},{"name":"tetranucleate during vegetative growth","type":"exact"},{"name":"tetranucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004043"}


id: GO:0061897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinal + 2 H+ + O2 + 2 reduced [adrenodoxin] = all-trans-3,4-didehydro retinal + 2 H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:27059013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"all-trans retinal 3,4-desaturase activity","termid":"GO:0061897"}


id: GO:0015021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the elimination of sulfate; appears to act on linkages between N-acetyl-D-glucosamine and uronate. Product is an unsaturated sugar.","definition_xrefs":["EC:4.2.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"heparin-sulfate lyase activity","secondary_identifiers":["MetaCyc:4.2.2.8-RXN"],"synonyms":[{"name":"[heparan sulfate]-sulfate lyase activity","type":"related"},{"name":"heparin-sulfate eliminase activity","type":"related"},{"name":"heparin-sulphate lyase activity","type":"exact"},{"name":"heparitin-sulfate lyase activity","type":"exact"},{"name":"heparitinase I","type":"related"},{"name":"heparitinase II","type":"related"}],"termid":"GO:0015021"}


id: MONDO:0014370
data:
  {"annotated_genes":["SJAG_04902"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86230],"is_not":false,"summary":null,"term":"MONDO:0014370"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the VPS53 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04902":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 2E","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615851","UMLS:C4014488","DOID:0060271","GARD:18348","MEDGEN:862925"],"synonyms":[{"name":"PCH2E","type":"related"},{"name":"VPS53 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in VPS53","type":"exact"},{"name":"pontocerebellar hypoplasia type 2E","type":"exact"},{"name":"pontocerebellar hypoplasia, type 2E","type":"related"}],"termid":"MONDO:0014370","terms_by_termid":{"MONDO:0014370":null},"xrefs":{"Monarch":{"xref_id":"0014370"}}}


id: GO:0032797
data:
  {"annotated_genes":["SJAG_03894","SJAG_03323","SJAG_05195","SJAG_01217"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95769,101105,104349,108780],"is_not":false,"summary":null,"term":"GO:0032797"}]},"cv_name":"cellular_component","definition":"A protein complex that contains the survival motor neuron (SMN) protein and at least eight additional integral components, including the Gemin2-8 and Unrip proteins; the complex is found in the cytoplasm and in nuclear Gems, and is involved in spliceosomal snRNP assembly in the cytoplasm and in pre-mRNA splicing in the nucleus.","definition_xrefs":["PMID:16434402","PMID:17023415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"},{"relation_name":"part_of","term_name":"SMN-Sm protein complex","termid":"GO:0034719"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01217":null,"SJAG_03323":null,"SJAG_03894":null,"SJAG_05195":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"SMN complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SMN core complex","type":"exact"},{"name":"survival motor neuron complex","type":"exact"}],"termid":"GO:0032797","terms_by_termid":{"GO:0032797":null}}


id: PBO:0068949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 193, pseudogene","termid":"PBO:0068949"}


id: PBO:0090113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RagC/D GTPase Gtr2","termid":"PBO:0090113"}


id: MONDO:0003535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the fallopian tube and is characterized by a papillary architectural pattern.","definition_xrefs":["NCIT:C6267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenocarcinoma","termid":"MONDO:0002512"},{"relation_name":"is_a","term_name":"fallopian tube adenocarcinoma","termid":"MONDO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube papillary adenocarcinoma","secondary_identifiers":["MEDGEN:234261","UMLS:C1333595","DOID:5597"],"synonyms":[{"name":"fallopian tube papillary adenocarcinoma","type":"exact"},{"name":"papillary adenocarcinoma of fallopian tube","type":"exact"},{"name":"papillary adenocarcinoma of the fallopian tube","type":"exact"}],"termid":"MONDO:0003535","xrefs":{"Monarch":{"xref_id":"0003535"}}}


id: PBO:0047583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3 pseudogene 3","termid":"PBO:0047583"}


id: MONDO:0011658
data:
  {"annotated_genes":["SJAG_04404","SJAG_02106"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85987,85988],"is_not":false,"summary":null,"term":"MONDO:0011658"}]},"cv_name":"mondo","definition":"Any Parkinson disease in which the cause of the disease is a mutation in the PARK7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02106":null,"SJAG_04404":null},"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive early-onset Parkinson disease 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565238","OMIM:606324","GARD:18606","MEDGEN:344049","UMLS:C1853445","DOID:0060370"],"synonyms":[{"name":"PARK7","type":"related"},{"name":"PARK7 Parkinson disease","type":"exact"},{"name":"Parkinson disease 7, autosomal recessive early-onset","type":"related"},{"name":"Parkinson disease caused by mutation in PARK7","type":"exact"},{"name":"autosomal recessive early-onset Parkinson disease 7","type":"exact"},{"name":"autosomal recessive early-onset Parkinson disease type 7","type":"exact"},{"name":"autosomal recessive early-onset Parkinson's disease 7","type":"related"}],"termid":"MONDO:0011658","terms_by_termid":{"MONDO:0011658":null},"xrefs":{"Monarch":{"xref_id":"0011658"}}}


id: PBO:0052789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 28","termid":"PBO:0052789"}


id: PBO:0057146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR223 host gene","termid":"PBO:0057146"}


id: MONDO:0011639
data:
  {"annotated_genes":["SJAG_02749","SJAG_04746"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86220,86221],"is_not":false,"summary":null,"term":"MONDO:0011639"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPS28 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02749":null,"SJAG_04746":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 15 with mandibulofacial dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111894","MEDGEN:902755","OMIM:606164","UMLS:C4225411","GARD:15390"],"synonyms":[{"name":"DBA15","type":"related"},{"name":"Diamond Blackfan anaemia 15 with mandibulofacial dysostosis","type":"exact"},{"name":"Diamond Blackfan anemia 15 with mandibulofacial dysostosis","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPS28","type":"exact"},{"name":"Diamond-Blackfan anemia 15 with mandibulofacial dysostosis","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPS28","type":"exact"},{"name":"RPS28 Diamond-Blackfan anaemia","type":"exact"},{"name":"RPS28 Diamond-Blackfan anemia","type":"exact"}],"termid":"MONDO:0011639","terms_by_termid":{"MONDO:0011639":null},"xrefs":{"Monarch":{"xref_id":"0011639"}}}


id: GO:0003298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of a muscle organ or tissue due to an increase in the size of its muscle cells. Physiological hypertrophy is a normal process during development.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"physiological muscle hypertrophy","termid":"GO:0003298"}


id: MONDO:0019370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvovaginal gingival syndrome","secondary_identifiers":["GARD:19037","MEDGEN:848586","SCTID:707250009","icd11.foundation:997964040","Orphanet:83453","UMLS:C3873472"],"termid":"MONDO:0019370","xrefs":{"Monarch":{"xref_id":"0019370"}}}


id: MONDO:0019364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudotyphus of California is a rare, flea-borne Rickettsial disease caused by a Rickettsia felis infection. Patients can be asymptomatic or can present with unspecific symptoms (such as fever, headache, generalized maculopapular rash, myalgia, arthralgia and, occasionally, eschar. lymphadenopathy, nausea, vomiting, loss of appetite and abdominal pain. Rarely, serious manifestations may occur and include neurological dysfunction (photophobia, hearing loss, and signs of meningitis) and pulmonary compromise.","definition_xrefs":["Orphanet:83316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudotyphus of California","secondary_identifiers":["GARD:19034","MEDGEN:1643522","SCTID:764104003","UMLS:C4706680"],"termid":"MONDO:0019364","xrefs":{"Monarch":{"xref_id":"0019364"}}}


id: PR:Q9USJ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4B3.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USJ2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein got1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.02c","synonyms":[{"name":"Golgi transport protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC4B3.02c","type":"exact"}],"termid":"PR:Q9USJ2"}


id: MONDO:0015965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic refraction anomaly (obsolete MONDO:0015965)","secondary_identifiers":["Orphanet:183601"],"termid":"MONDO:0015965","xrefs":{"Monarch":{"xref_id":"0015965"}}}


id: GO:0032327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the W-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear tungsten ion (W) coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor catabolic process","termid":"GO:0032325"},{"relation_name":"is_a","term_name":"W-molybdopterin cofactor metabolic process","termid":"GO:0042046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"W-molybdopterin cofactor catabolic process","synonyms":[{"name":"Moco catabolic process","type":"broad"},{"name":"Moco catabolism","type":"broad"},{"name":"W-molybdopterin cofactor breakdown","type":"exact"},{"name":"W-molybdopterin cofactor catabolism","type":"exact"},{"name":"W-molybdopterin cofactor degradation","type":"exact"}],"termid":"GO:0032327"}


id: PBO:0074043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A25 antisense RNA 1","termid":"PBO:0074043"}


id: MONDO:0005094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An antiquated term that refers to benign or malignant mesenchymal neoplasms characterized by the presence of neoplastic spindle-shaped to round cells arranged around thin-walled branching vascular spaces.","definition_xrefs":["NCIT:C3087"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete connective tissue cancer (obsolete MONDO:0002176)","termid":"MONDO:0002176"},{"relation_name":"is_a","term_name":"hemangiopericytic tumor","termid":"MONDO:0002789"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiopericytoma","secondary_identifiers":["SCTID:134335004","MEDGEN:5478","ICDO:9150/1","MESH:D006393","UMLS:C0018922","DOID:264"],"synonyms":[{"name":"haemangiopericytic meningioma","type":"exact"},{"name":"haemangiopericytic meningioma [obs]","type":"exact"},{"name":"hemangiopericytoma","type":"exact"},{"name":"hemangiopericytoma, malignant (morphologic abnormality)","type":"narrow"},{"name":"malignant hemangiopericytoma","type":"narrow"}],"termid":"MONDO:0005094","xrefs":{"Monarch":{"xref_id":"0005094"}}}


id: PBO:0005050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol O-acyltransferase Dga1","termid":"PBO:0005050"}


id: PR:O42951
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abz2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminodeoxychorismate lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.02","synonyms":[{"name":"4-amino-4-deoxychorismate lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ADC lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ADCL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-abz2","type":"exact"}],"termid":"PR:O42951"}


id: MONDO:0004558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland adenoma composed of large size follicles.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicular thyroid adenoma","termid":"MONDO:0005032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid gland macrofollicular adenoma","secondary_identifiers":["MEDGEN:90763","UMLS:C0334329","DOID:8419","ICDO:8334/0","NCIT:C4161"],"synonyms":[{"name":"colloid adenoma","type":"related"},{"name":"macrofollicular adenoma","type":"exact"},{"name":"macrofollicular adenoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004558","xrefs":{"Monarch":{"xref_id":"0004558"}}}


id: GO:0140586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Bridging together a cis-regulatory element and a terminator DNA sequences on the chromatin, holding two loop anchors together, maintaining a chromatin loop.","definition_xrefs":["PMID:19933151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin loop anchoring activity","termid":"GO:0140587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677","GO:0060090"],"is_obsolete":false,"name":"promoter-terminator loop anchoring activity","synonyms":[{"name":"terminator-promoter loop anchoring activity","type":"exact"}],"termid":"GO:0140586"}


id: FYPO:0006131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of gluconate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular gluconate level","synonyms":[{"name":"increased cellular gluconate level during mitotic cell cycle","type":"related"},{"name":"increased cellular gluconate level during vegetative growth","type":"exact"},{"name":"increased gluconate accumulation","type":"related"}],"termid":"FYPO:0006131"}


id: GO:0000456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Dimethylation of the N6 amino groups of two consecutive adenosine residues near the 3'-end of the SSU rRNA. This process has been conserved from bacteria to eukaryotes.","definition_xrefs":["ISBN:1555811337","GOC:tb","GOC:dph","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylation involved in SSU-rRNA maturation (obsolete GO:0000456)","termid":"GO:0000456"}


id: PBO:0080660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 5","termid":"PBO:0080660"}


id: FYPO:0005103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"curved elongated vegetative cell","synonyms":[{"name":"curved elongated cell","type":"exact"},{"name":"curved elongated cell during vegetative growth","type":"exact"},{"name":"curved elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005103"}


id: PBO:0091563
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Rad Wee1","termid":"PBO:0091563"}


id: MONDO:0007981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metachromatic leukodystrophy","termid":"MONDO:0018868"}],"gene_count":0,"genotype_count":0,"name":"obsolete metachromatic leukodystrophy, adult-onset, with normal arylsulfatase A (obsolete MONDO:0007981)","secondary_identifiers":["OMIM:156310","MESH:C563587"],"synonyms":[{"name":"metachromatic leukodystrophy, adult-onset, with normal arylsulfatase A","type":"exact"},{"name":"metachromatic leukodystrophy, adult-onset, with normal arylsulfatase type A","type":"exact"}],"termid":"MONDO:0007981","xrefs":{"Monarch":{"xref_id":"0007981"}}}


id: GO:0050420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 alpha-D-glucose 1-phosphate = maltose + 2 phosphate.","definition_xrefs":["EC:2.4.1.139","MetaCyc:MALTOSE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"maltose synthase activity","secondary_identifiers":["RHEA:22320"],"synonyms":[{"name":"alpha-D-glucose-1-phosphate:alpha-D-glucose-1-phosphate 4-alpha-D-glucosyltransferase (dephosphorylating)","type":"related"}],"termid":"GO:0050420"}


id: PBO:0056410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 7","termid":"PBO:0056410"}


id: PBO:0043707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 4","termid":"PBO:0043707"}


id: PBO:0051025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 5","termid":"PBO:0051025"}


id: GO:0023031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex class Ib molecules via the lateral surface.","definition_xrefs":["GOC:vw","GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class Ib protein binding","termid":"GO:0023029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"MHC class Ib protein binding, via lateral surface","termid":"GO:0023031"}


id: GO:0048808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of male genitalia are generated and organized.","definition_xrefs":["GOC:ems","ISBN:0140512888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"},{"relation_name":"is_a","term_name":"male anatomical structure morphogenesis","termid":"GO:0090598"},{"relation_name":"part_of","term_name":"male genitalia development","termid":"GO:0030539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male genitalia morphogenesis","synonyms":[{"name":"male genital morphogenesis","type":"related"}],"termid":"GO:0048808"}


id: PBO:0065623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN2 pseudogene 1","termid":"PBO:0065623"}


id: GO:0090348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organohalogen metabolic process","termid":"GO:0090347"},{"relation_name":"regulates","term_name":"organofluorine metabolic process","termid":"GO:0090346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of organofluorine metabolic process","termid":"GO:0090348"}


id: MONDO:1011523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia A that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A, non-human animal","termid":"MONDO:1011408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia A, horse","secondary_identifiers":["OMIA:000437-9796"],"termid":"MONDO:1011523","xrefs":{"Monarch":{"xref_id":"1011523"}}}


id: PBO:0091710
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of K-252a Sensitivity","termid":"PBO:0091710"}


id: PBO:0045242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C21","termid":"PBO:0045242"}


id: PBO:0057942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3667","termid":"PBO:0057942"}


id: PR:O74340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DDB1- and CUL4-associated factor 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03079","PANTHER:PTHR22851:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sof1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.07c","secondary_identifiers":["UniProtKB:O74340"],"synonyms":[{"name":"Spom972h-DCAF13","type":"exact"},{"name":"U3 small nucleolar RNA-associated protein sof1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein sof1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74340"}


id: FYPO:0003928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the repair of double-strand breaks in DNA that are continually made (for example, by constitutive expression of a nuclease) results in repair junctions that differ from wild type.","definition_xrefs":["PMID:22093869","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0005447","FYPO:0000002","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"altered double-strand break repair junction in presence of persistent double-strand breaks","synonyms":[{"name":"abnormal double-strand break repair resulting in formation of altered repair junction","type":"exact"},{"name":"altered pattern of repair junctions in HO survivors","type":"narrow"}],"termid":"FYPO:0003928"}


id: PBO:0090588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall alpha-1,4-glucan synthase, meiotic Mok14","termid":"PBO:0090588"}


id: PBO:0054986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2400","termid":"PBO:0054986"}


id: PBO:0033765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Rad51_foci_during_cellular_response_to_ionizing_radiation","termid":"PBO:0033765"}


id: PBO:0029379
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV","termid":"PBO:0029379"}


id: PBO:0024797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-molecularly_interacts_with","termid":"PBO:0024797"}


id: GO:0019803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The carboxylation of peptidyl-aspartic acid to form peptidyl-L-beta-carboxyaspartic acid.","definition_xrefs":["RESID:AA0304"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-aspartic acid carboxylation (obsolete GO:0019803)","termid":"GO:0019803"}


id: MONDO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypermetabolic syndrome characterized by tachycardia, palpitations, tremor, weight loss, and moist skin that is caused by the elevation of thyroid hormone levels in the serum of the newborn infant or thyroid-axis receptor activation, most commonly due to transplacental passage of thyroid stimulating globulins.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyrotoxicosis","termid":"MONDO:0010138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"neonatal thyrotoxicosis","secondary_identifiers":["MEDGEN:510684","ICD9:775.3","NCIT:C114906","DOID:12573","SCTID:13795004","UMLS:C0158983"],"synonyms":[{"name":"infantile hyperthyroidism","type":"exact"}],"termid":"MONDO:0001555","xrefs":{"Monarch":{"xref_id":"0001555"}}}


id: GO:0050909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of chemical stimulus","termid":"GO:0007606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of taste","secondary_identifiers":["Reactome:R-HSA-9717189","Wikipedia:Taste"],"synonyms":[{"name":"gustation","type":"exact"},{"name":"sense of taste","type":"exact"},{"name":"taste","type":"exact"},{"name":"taste perception","type":"exact"}],"termid":"GO:0050909"}


id: GO:0061729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-D-mannose from D-fructose-6-phosphate.","definition_xrefs":["PMID:16339137","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-mannose biosynthetic process","termid":"GO:0009298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"GDP-D-mannose biosynthetic process from fructose-6-phosphate","secondary_identifiers":["MetaCyc:PWY-5659"],"synonyms":[{"name":"GDP-mannose biosynthetic process from fructose-6-phosphate","type":"related"},{"name":"GDP-mannose biosynthetic process from glucose","type":"related"}],"termid":"GO:0061729"}


id: PBO:0088367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arv1-like family protein Arv1","termid":"PBO:0088367"}


id: PBO:0033832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase Psk1","termid":"PBO:0033832"}


id: PBO:0073585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 2 pseudogene 1","termid":"PBO:0073585"}


id: PBO:0080459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2 like","termid":"PBO:0080459"}


id: GO:0047070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + 3-(2,3-dihydroxyphenyl)propanoate = 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate.","definition_xrefs":["EC:1.13.11.16","MetaCyc:1.13.11.16-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-carboxyethylcatechol 2,3-dioxygenase activity","secondary_identifiers":["RHEA:23840","GO:0008669"],"synonyms":[{"name":"2,3-dihydroxy-beta-phenylpropionate oxygenase activity","type":"related"},{"name":"2,3-dihydroxy-beta-phenylpropionic dioxygenase activity","type":"related"},{"name":"3-(2,3-dihydroxyphenyl)propanoate:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"3-(2,3-dihydroxyphenyl)propanoate:oxygen 1,2-oxidoreductase activity","type":"related"}],"termid":"GO:0047070"}


id: GO:0005126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cytokine receptor.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cytokine receptor binding","synonyms":[{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor binding","type":"exact"},{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor ligand","type":"narrow"}],"termid":"GO:0005126"}


id: PBO:0113005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Argininosuccinate synthetase; catalyzes the formation of L-argininosuccinate from citrulline and L-aspartate in the arginine biosynthesis pathway; potential Cdc28p substrate","termid":"PBO:0113005"}


id: PBO:0042250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor like 2","termid":"PBO:0042250"}


id: MONDO:0008228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaloblastic anemia caused by vitamin B-12 deficiency due to impaired absorption. The impaired absorption of vitamin B-12 is secondary to atrophic gastritis and loss of gastric parietal cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaloblastic anemia","termid":"MONDO:0001700"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"pernicious anemia","secondary_identifiers":["GARD:12671","ICD9:281.0","DOID:13381","OMIM:170900","MEDGEN:1531","MESH:D000752","Orphanet:120","SCTID:84027009","UMLS:C0002892","EFO:0005576","NCIT:C2871"],"synonyms":[{"name":"Addison anaemia","type":"exact"},{"name":"Addison anemia","type":"exact"},{"name":"Addison's anaemia","type":"exact"},{"name":"Addison's anemia","type":"exact"},{"name":"Addison-Biermer anaemia","type":"exact"},{"name":"Addison-Biermer anemia","type":"exact"},{"name":"Biermer anaemia","type":"exact"},{"name":"Biermer anemia","type":"exact"},{"name":"Biermer disease","type":"exact"},{"name":"Biermer's anaemia","type":"exact"},{"name":"Biermer's anemia","type":"exact"},{"name":"acquired pernicious anaemia","type":"exact"},{"name":"acquired pernicious anemia","type":"exact"},{"name":"anaemia pernicious","type":"exact"},{"name":"anemia pernicious","type":"exact"},{"name":"intrinsic factor deficiency","type":"exact"},{"name":"juvenile onset pernicious anaemia","type":"exact"},{"name":"juvenile onset pernicious anemia","type":"exact"},{"name":"pernicious anemia","type":"exact"}],"termid":"MONDO:0008228","xrefs":{"Monarch":{"xref_id":"0008228"}}}


id: PBO:0012229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein (fungal and protozoan)","termid":"PBO:0012229"}


id: PR:O43091
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A decaprenyl-diphosphate synthase subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02552","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl-diphosphate synthase subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.01","secondary_identifiers":["UniProtKB:O43091"],"synonyms":[{"name":"Spom972h-PDSS1","type":"exact"},{"name":"all-trans-decaprenyl-diphosphate synthase subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"decaprenyl pyrophosphate synthase subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43091"}


id: PBO:0062376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 19 pseudogene","termid":"PBO:0062376"}


id: PBO:0081125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger homeobox 3","termid":"PBO:0081125"}


id: PBO:0116501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin-repeat related protein","termid":"PBO:0116501"}


id: PBO:0061655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear FMR1 interacting protein 2","termid":"PBO:0061655"}


id: GO:0050108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S,4R)-bornyl diphosphate + H2O = (1R,2S,4R)-borneol + diphosphate.","definition_xrefs":["PMID:42357","EC:3.1.7.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"monoterpenyl-diphosphatase activity","secondary_identifiers":["RHEA:81371","MetaCyc:MONOTERPENYL-PYROPHOSPHATASE-RXN"],"synonyms":[{"name":"bornyl diphosphate hydrolase activity","type":"related"},{"name":"bornyl pyrophosphate hydrolase activity","type":"related"},{"name":"monoterpenyl-diphosphate diphosphohydrolase activity","type":"related"},{"name":"monoterpenyl-pyrophosphatase activity","type":"exact"}],"termid":"GO:0050108"}


id: PBO:0085176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-methyltransferase; catalyzes two different O-methylation steps in ubiquinone (Coenzyme Q) biosynthesis; component of a mitochondrial ubiquinone-synthesizing complex; phosphoprotein","termid":"PBO:0085176"}


id: GO:0032722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of chemokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"positively_regulates","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine production","secondary_identifiers":["GO:0090197","GO:0045080"],"synonyms":[{"name":"activation of chemokine production","type":"narrow"},{"name":"positive regulation of chemokine biosynthetic process","type":"narrow"},{"name":"positive regulation of chemokine secretion","type":"narrow"},{"name":"stimulation of chemokine production","type":"narrow"},{"name":"up regulation of chemokine production","type":"exact"},{"name":"up-regulation of chemokine production","type":"exact"},{"name":"upregulation of chemokine production","type":"exact"}],"termid":"GO:0032722"}


id: GO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane long-chain fatty acid transporter (obsolete GO:0000039)","synonyms":[{"name":"plasma membrane long-chain fatty acid transporter","type":"exact"}],"termid":"GO:0000039"}


id: PBO:0004238
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systematic ID does not reflect chromosome","termid":"PBO:0004238"}


id: GO:0015398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of ammonium from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete high-affinity secondary active ammonium transmembrane transporter activity (obsolete GO:0015398)","synonyms":[{"name":"high affinity secondary active ammonium transmembrane transporter activity","type":"exact"}],"termid":"GO:0015398"}


id: GO:0106387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanosine 5'-monophosphate (GMP) through an inosine 5'-monophosphate (IMP) intermediate.","definition_xrefs":["PMID:25605736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GMP biosynthetic process","termid":"GO:0006177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"'de novo' GMP biosynthetic process","synonyms":[{"name":"'de novo' guanosine 5'-monophosphate biosynthetic process","type":"exact"}],"termid":"GO:0106387"}


id: PBO:0067347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 444, pseudogene","termid":"PBO:0067347"}


id: PBO:0073651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIL1 nucleotide exchange factor","termid":"PBO:0073651"}


id: PBO:0005153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASP family protein involved in Golgi vesicle transport (predicted)","termid":"PBO:0005153"}


id: MONDO:0010413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 95","secondary_identifiers":["OMIM:300716","GARD:22684","UMLS:C2678034","MESH:C567470","MEDGEN:394715"],"synonyms":[{"name":"MRX95","type":"exact"},{"name":"intellectual disability, X-linked 95","type":"exact"},{"name":"mental retardation, X-linked 95","type":"related"},{"name":"mental retardation, X-linked 95, X-linked dominant","type":"exact"}],"termid":"MONDO:0010413","xrefs":{"Monarch":{"xref_id":"0010413"}}}


id: FYPO:0004559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, is shaped in the form of a spheroid, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spheroid vegetative cell","termid":"FYPO:0000945"},{"relation_name":"is_a","term_name":"viable spheroid vegetative cell","termid":"FYPO:0002380"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"viable swollen spheroid vegetative cell","synonyms":[{"name":"viable enlarged spheroid vegetative cell","type":"related"},{"name":"viable enlarged volume spheroid vegetative cell","type":"exact"},{"name":"viable large spheroid vegetative cell","type":"related"},{"name":"viable swollen rounded vegetative cell","type":"exact"},{"name":"viable swollen spheroid cell during vegetative growth","type":"exact"},{"name":"viable swollen spheroid vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004559"}


id: MONDO:0030048
data:
  {"annotated_genes":["SJAG_04944"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85214],"is_not":false,"summary":null,"term":"MONDO:0030048"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"CPOX-related hereditary coproporphyria","termid":"MONDO:0800180"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019142"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0019142"],"is_obsolete":false,"name":"harderoporphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:137981","UMLS:C0342859","MESH:C562816","OMIM:618892","icd11.foundation:1664486132","Orphanet:659672"],"synonyms":[{"name":"HARDEROPORPHYRIA","type":"exact"},{"name":"HARPO","type":"exact"},{"name":"harderoporphyria","type":"exact"}],"termid":"MONDO:0030048","terms_by_termid":{"MONDO:0030048":null},"xrefs":{"Monarch":{"xref_id":"0030048"}}}


id: PBO:0070985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 9","termid":"PBO:0070985"}


id: GO:0010836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of protein ADP-ribosylation. Protein ADP-ribosylation is the transfer, from NAD, of ADP-ribose to protein amino acids.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ADP-ribosylation","termid":"GO:0010835"},{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein ADP-ribosylation","synonyms":[{"name":"negative regulation of protein amino acid ADP-ribosylation","type":"exact"}],"termid":"GO:0010836"}


id: PBO:0058639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6770-1","termid":"PBO:0058639"}


id: GO:1900354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methanofuran metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of methanofuran metabolic process","synonyms":[{"name":"regulation of methanofuran metabolism","type":"exact"}],"termid":"GO:1900354"}


id: MONDO:1011249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoschisis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoschisis, non-human animal","termid":"MONDO:1010328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoschisis, dog","secondary_identifiers":["OMIA:001185-9615"],"termid":"MONDO:1011249","xrefs":{"Monarch":{"xref_id":"1011249"}}}


id: PBO:0066218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 23","termid":"PBO:0066218"}


id: MONDO:0010642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Lesch-Nyhan syndrome","termid":"MONDO:0010298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"Lesch-Nyhan phenotype with normal HGPRT","secondary_identifiers":["OMIM:308950","UMLS:C1839883","MEDGEN:374332"],"synonyms":[{"name":"Lesch-Nyhan phenotype with normal HGPRT","type":"exact"}],"termid":"MONDO:0010642","xrefs":{"Monarch":{"xref_id":"0010642"}}}


id: GO:0071644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of chemokine (C-C motif) ligand 4.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 4 production","termid":"GO:0071643"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-C motif) ligand 4 production","termid":"GO:0071606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of chemokine (C-C motif) ligand 4 production","synonyms":[{"name":"negative regulation of CCL4 production","type":"exact"},{"name":"negative regulation of MIP-1b production","type":"exact"},{"name":"negative regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071644"}


id: PBO:0076108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 16","termid":"PBO:0076108"}


id: PBO:0042386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300c molecule","termid":"PBO:0042386"}


id: GO:0060775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) contributing to the interdigitation of cells along the mediolateral axis during gastrulation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in gastrula mediolateral intercalation (obsolete GO:0060775)","termid":"GO:0060775"}


id: PBO:0044392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 9","termid":"PBO:0044392"}


id: MONDO:0004028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant neoplasm arising from the small intestine. It is characterized by the presence of spindle-shaped fibroblasts and collagenous stroma formation in a herringbone growth pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestinal sarcoma","termid":"MONDO:0003361"},{"relation_name":"is_a","term_name":"fibrosarcoma","termid":"MONDO:0005164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"small intestinal fibrosarcoma","secondary_identifiers":["UMLS:C1335994","NCIT:C5336","MEDGEN:234788","DOID:6880"],"synonyms":[{"name":"fibrosarcoma of small bowel","type":"exact"},{"name":"fibrosarcoma of small intestine","type":"exact"},{"name":"fibrosarcoma of the small bowel","type":"exact"},{"name":"fibrosarcoma of the small intestine","type":"exact"},{"name":"fibrosarcoma, small intestine","type":"exact"},{"name":"small bowel fibrosarcoma","type":"exact"},{"name":"small intestinal fibrosarcoma","type":"exact"},{"name":"small intestine fibrosarcoma","type":"exact"},{"name":"small intestine fibrosarcoma (disease)","type":"exact"}],"termid":"MONDO:0004028","xrefs":{"Monarch":{"xref_id":"0004028"}}}


id: MONDO:0005448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Liver injury resulting from hepatitis C infection.","definition_xrefs":["EFO:0005129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cirrhosis of liver","termid":"MONDO:0005155"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatitis C induced liver cirrhosis","secondary_identifiers":["MEDGEN:1674707","UMLS:C4763867"],"termid":"MONDO:0005448","xrefs":{"Monarch":{"xref_id":"0005448"}}}


id: GO:0050562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tRNA(Pyl) + L-lysine + ATP = L-lysyl-tRNA(Pyl) + diphosphate + AMP.","definition_xrefs":["MetaCyc:6.1.1.25-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete lysine-tRNA(Pyl) ligase activity (obsolete GO:0050562)","synonyms":[{"name":"L-lysine:tRNAPyl ligase (AMP-forming)","type":"exact"},{"name":"lysine-tRNAPyl ligase activity","type":"exact"}],"termid":"GO:0050562"}


id: PBO:0109358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMTOR5 and SLC16A4 antisense RNA 1","termid":"PBO:0109358"}


id: PBO:0045289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 40","termid":"PBO:0045289"}


id: PBO:0116616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3142","termid":"PBO:0116616"}


id: GO:0102781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + isofucosterol + O2 + NADPH = (22alpha)-hydroxy-isofucosterol + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isofucosterol hydroxylase activity (obsolete GO:0102781)","termid":"GO:0102781"}


id: GO:2000242
data:
  {"annotated_genes":["SJAG_02921","SJAG_04280","SJAG_04394","SJAG_00975","SJAG_01754","SJAG_02444","SJAG_03327","SJAG_00990","SJAG_01330","SJAG_01919","SJAG_01837","SJAG_00145","SJAG_04287","SJAG_01254","SJAG_01515","SJAG_02723","SJAG_00472","SJAG_02266","SJAG_00364","SJAG_02481","SJAG_01082","SJAG_04140","SJAG_02773","SJAG_03081","SJAG_01311","SJAG_03438","SJAG_02426","SJAG_03854","SJAG_01680","SJAG_01084","SJAG_02771","SJAG_04312","SJAG_00526","SJAG_04682","SJAG_03048","SJAG_02592","SJAG_00266","SJAG_01699","SJAG_04026","SJAG_04259","SJAG_00600","SJAG_01401","SJAG_04126","SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114288,106116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[115851,106414,91224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[106415,88847,114048,115852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[75086,116460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[110993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[104713,101419,93014,116354,88598,102159,91884,96181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031138"},{"annotations":[94949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140538"},{"annotations":[78290,70368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"},{"annotations":[114261,101646,87994,94023,100342,105614,115324,106646,106294,104295,115863,106450,105708,92723,91203,94163,108808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010515"},{"annotations":[116173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051447"},{"annotations":[98494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[93124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[107767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[113575],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[101137],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of reproductive process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"negatively_regulates","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00266":null,"SJAG_00364":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_01082":null,"SJAG_01084":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01330":null,"SJAG_01401":null,"SJAG_01515":null,"SJAG_01680":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_01837":null,"SJAG_01919":null,"SJAG_02266":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02771":null,"SJAG_02773":null,"SJAG_02921":null,"SJAG_03048":null,"SJAG_03081":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_03854":null,"SJAG_04026":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04312":null,"SJAG_04394":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of reproductive process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:2000242","terms_by_termid":{"GO:0010515":null,"GO:0031138":null,"GO:0033315":null,"GO:0033316":null,"GO:0045128":null,"GO:0051447":null,"GO:0051598":null,"GO:0075297":null,"GO:0090029":null,"GO:0110031":null,"GO:0140538":null,"GO:1902103":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0102530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aclacinomycin T(1+) + H2O = 15-demethylaclacinomycin T + methanol + H+.","definition_xrefs":["GOC:pz","EC:3.1.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"aclacinomycin T methylesterase activity","secondary_identifiers":["MetaCyc:RXN-14703","RHEA:37891"],"termid":"GO:0102530"}


id: PBO:0081434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 285D, pseudogene","termid":"PBO:0081434"}


id: GO:0045246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the heteromeric enzymes, located in the cytosol, that act in the tricarboxylic acid (TCA) cycle.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic tricarboxylic acid cycle enzyme complex (obsolete GO:0045246)","synonyms":[{"name":"TCA cycle enzyme complex","type":"broad"},{"name":"tricarboxylic acid cycle enzyme complex","type":"broad"}],"termid":"GO:0045246"}


id: GO:0018340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-serine to peptidyl-O-(sn-1-glycerophosphoryl)-L-serine.","definition_xrefs":["RESID:AA0264"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-O-(sn-1-glycerophosphoryl)-L-serine biosynthetic process from peptidyl-serine (obsolete GO:0018340)","synonyms":[{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine anabolism from peptidyl-serine","type":"exact"},{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine formation from peptidyl-serine","type":"exact"},{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine synthesis from peptidyl-serine","type":"exact"}],"termid":"GO:0018340"}


id: PBO:0084787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; forms a heterodimer complex with Mto1p that performs the 5-carboxymethylaminomethyl modification of the wobble uridine base in mitochondrial tRNAs; similar to human GTPBP3","termid":"PBO:0084787"}


id: PR:Q9Y794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An origin recognition complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12087:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.13","secondary_identifiers":["UniProtKB:Q9Y794"],"synonyms":[{"name":"SPBP23A10.13","type":"related"},{"name":"Spom972h-ORC4","type":"exact"},{"name":"orp4","type":"related"}],"termid":"PR:Q9Y794"}


id: PBO:0056087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 96","termid":"PBO:0056087"}


id: MONDO:1010133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrodermatitis enteropathica that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrodermatitis enteropathica, non-human animal","secondary_identifiers":["OMIA:000593"],"termid":"MONDO:1010133","xrefs":{"Monarch":{"xref_id":"1010133"}}}


id: GO:0072562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A phospholipid microvesicle that is derived from any of several cell types, such as platelets, blood cells, endothelial cells, or others, and contains membrane receptors as well as other proteins characteristic of the parental cell. Microparticles are heterogeneous in size, and are characterized as microvesicles free of nucleic acids.","definition_xrefs":["GOC:mah","GOC:BHF","PMID:16373184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"blood microparticle","synonyms":[{"name":"cell membrane microparticle","type":"exact"}],"termid":"GO:0072562"}


id: GO:0061269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of glomerular mesangial cells in the mesonephros, resulting in the expansion of the population.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"},{"relation_name":"is_a","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"},{"relation_name":"part_of","term_name":"mesonephric glomerular mesangium development","termid":"GO:0061247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular mesangial cell proliferation involved in mesonephros development","termid":"GO:0061269"}


id: MONDO:0013924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the BMP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta","termid":"MONDO:0019019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 13","secondary_identifiers":["OMIM:614856","UMLS:C3553887","GARD:15856","MEDGEN:766801","DOID:0110342"],"synonyms":[{"name":"BMP1 osteogenesis imperfecta","type":"exact"},{"name":"OI, type 13","type":"related"},{"name":"OI13","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in BMP1","type":"exact"},{"name":"osteogenesis imperfecta type XIII","type":"exact"},{"name":"osteogenesis imperfecta, type 13","type":"related"},{"name":"osteogenesis imperfecta, type XIII","type":"related"}],"termid":"MONDO:0013924","xrefs":{"Monarch":{"xref_id":"0013924"}}}


id: SO:0000317
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Complementary DNA; A piece of DNA copied from an mRNA and spliced into a vector for propagation in a suitable host.","direct_ancestors":[{"relation_name":"has_quality","term_name":"cDNA","termid":"SO:0000756"},{"relation_name":"is_a","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cDNA_clone","synonyms":[{"name":"cDNA clone","type":"exact"}],"termid":"SO:0000317"}


id: SO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of an operon, which is a set of genes transcribed together as a unit.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_array_member","termid":"SO:0000081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"operon_member","synonyms":[{"name":"operon member","type":"exact"}],"termid":"SO:0000080"}


id: PBO:0028250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis_during_cytokinesis","termid":"PBO:0028250"}


id: GO:0008512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + H+(out) = sulfate(in) + H+(in).","definition_xrefs":["TC:2.A.53.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active sulfate transmembrane transporter activity","termid":"GO:0008271"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sulfate:proton symporter activity","secondary_identifiers":["RHEA:28574"],"synonyms":[{"name":"sulfate/hydrogen symporter activity","type":"exact"},{"name":"sulfate:hydrogen symporter activity","type":"exact"},{"name":"sulphate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0008512"}


id: PBO:0005245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L2 (predicted)","termid":"PBO:0005245"}


id: PBO:0026920
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K8_acetylation","termid":"PBO:0026920"}


id: GO:0038132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuregulin, a member of the EGF family of growth factors.","definition_xrefs":["GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"neuregulin binding","termid":"GO:0038132"}


id: MOD:01962
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-asparagine.","definition_xrefs":["PubMed:19236052","RESID:AA0606","PubMed:12186869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-[(2,4-diacetylamino-2,4,6-trideoxy-beta-D-glucopyranosyl)amino]-4-oxobutanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (DATDGlc) asparagine","type":"exact"},{"name":"DABA","type":"exact"},{"name":"DATDH","type":"exact"},{"name":"DiNAcBac","type":"exact"},{"name":"N4-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-asparagine","type":"exact"},{"name":"N4-[2,4-bis(acetylamino)-2,4,6-trideoxy-beta-D-glucopyranosyl]-L-asparagine","type":"exact"},{"name":"N4-[N,N-diacetylbacillosaminyl]asparagine","type":"exact"},{"name":"N4-[N2,N4-diacetylbacillosaminyl]asparagine","type":"exact"}],"termid":"MOD:01962"}


id: GO:1990368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response that results in a state of tolerance to hydrolysate (product of hydrolysis).","definition_xrefs":["PMID:23356676","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete process resulting in tolerance to hydrolysate (obsolete GO:1990368)","synonyms":[{"name":"process resulting in tolerance to hydrolysate","type":"exact"}],"termid":"GO:1990368"}


id: PBO:0075099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 148","termid":"PBO:0075099"}


id: PBO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase Oar2 (predicted)","termid":"PBO:0001919"}


id: PBO:0011520
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome type 2","termid":"PBO:0011520"}


id: FYPO:0009096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing xylose as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0005447","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth on xylose carbon source","synonyms":[{"name":"increased growth on xylose carbon source","type":"broad"},{"name":"increased vegetative cell growth on xylose carbon source","type":"exact"}],"termid":"FYPO:0009096"}


id: FYPO:0006897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actomyosin contractile ring contraction is increased. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["GO:1902404","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"},{"relation_name":"is_a","term_name":"increased rate of cytokinesis","termid":"FYPO:0004428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000032","FYPO:0000002","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of actomyosin contractile ring contraction","synonyms":[{"name":"increased rate of actomyosin contractile ring constriction","type":"exact"},{"name":"increased rate of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"increased rate of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"increased rate of contractile ring contraction","type":"exact"},{"name":"increased rate of cytokinetic contractile ring contraction","type":"exact"},{"name":"increased rate of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"increased rate of mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0006897"}


id: MONDO:0958182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"C1Q deficiency","termid":"MONDO:0013343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"C1Q deficiency 1","secondary_identifiers":["OMIM:613652"],"termid":"MONDO:0958182","xrefs":{"Monarch":{"xref_id":"0958182"}}}


id: GO:0003360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the brainstem from its formation to the mature structure. The brainstem is the part of the brain that connects the brain with the spinal cord.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brainstem development","termid":"GO:0003360"}


id: PBO:0073653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIM bHLH transcription factor 1","termid":"PBO:0073653"}


id: GO:0014810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of skeletal muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014809"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014810"}


id: GO:0071469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus with pH > 7. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:go_curators","Wikipedia:PH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaline pH","termid":"GO:0010446"},{"relation_name":"is_a","term_name":"cellular response to pH","termid":"GO:0071467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to alkaline pH","synonyms":[{"name":"cellular response to alkalinity","type":"broad"},{"name":"cellular response to basic pH","type":"exact"}],"termid":"GO:0071469"}


id: PBO:0040766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3 pseudogene 1","termid":"PBO:0040766"}


id: GO:0033339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pectoral fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin development","termid":"GO:0033333"},{"relation_name":"is_a","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pectoral fin development","termid":"GO:0033339"}


id: PBO:0068687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 68, pseudogene","termid":"PBO:0068687"}


id: PBO:0044622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin domain containing 1","termid":"PBO:0044622"}


id: MONDO:0005978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of cattle, sheep, or goats with protozoa of the genus theileria. This infection results in an acute or chronic febrile condition.","definition_xrefs":["MESH:D013801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"theileriasis","secondary_identifiers":["SCTID:68771000","UMLS:C0039753","MEDGEN:11763","DOID:3733","ICD9:136.8","EFO:0007506"],"synonyms":[{"name":"infection by Theileria","type":"exact"},{"name":"theileriosis","type":"exact"}],"termid":"MONDO:0005978","xrefs":{"Monarch":{"xref_id":"0005978"}}}


id: PBO:0049490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.12 linker histone, cluster member, pseudogene","termid":"PBO:0049490"}


id: MONDO:0100481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tuberculosis caused by primary infection of or reactivation of latent Mycobacterium tuberculosis. Active tuberculosis characterized by clinical manifestation and active symptoms compatible with tuberculosis, and is distinct from latent tuberculosis infection that occurs without signs or symptoms of active disease.","definition_xrefs":["PMID:30020618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active tuberculosis","secondary_identifiers":["MEDGEN:508753","UMLS:C0151332"],"synonyms":[{"name":"active TB","type":"exact"}],"termid":"MONDO:0100481","xrefs":{"Monarch":{"xref_id":"0100481"}}}


id: PBO:0075763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRRM2 antisense RNA 1","termid":"PBO:0075763"}


id: PBO:0082239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-SNAP cochaperone; SNARE-complex adaptor for Sec18 (NSF) during the disassembly of postfusion cis-SNARE complexes; stimulates the ATPase activity of Sec18p; peripheral membrane protein required for vesicular transport between ER and Golgi, the 'priming' step in homotypic vacuole fusion, and autophagy; similar to mammalian alpha-SNAP","termid":"PBO:0082239"}


id: PBO:0073236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1","termid":"PBO:0073236"}


id: PBO:0039474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18D, pseudogene","termid":"PBO:0039474"}


id: MONDO:0010577
data:
  {"annotated_genes":["SJAG_04882","SJAG_03811"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85183,85184],"is_not":false,"summary":null,"term":"MONDO:0010577"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked nonsyndromic hearing loss","termid":"MONDO:0019586"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03811":null,"SJAG_04882":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, X-linked 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:304500","DOID:0111739","MEDGEN:336749","GARD:18098","MESH:C564433","UMLS:C1844677"],"synonyms":[{"name":"DFNX1","type":"narrow"},{"name":"deafness, X-linked 1","type":"narrow"},{"name":"deafness, X-linked 2, sensorineural congenital","type":"narrow"},{"name":"deafness, X-linked type 1","type":"narrow"}],"termid":"MONDO:0010577","terms_by_termid":{"MONDO:0010577":null},"xrefs":{"Monarch":{"xref_id":"0010577"}}}


id: MONDO:0021109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endophytic lesion in the urinary tract which shares several morphologic features with urothelial papilloma. This lesion may recur after complete excision. Transitional cell carcinomas may arise within inverted urothelial papillomas.","definition_xrefs":["NCIT:C6192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted transitional cell papilloma","termid":"MONDO:0003064"},{"relation_name":"is_a","term_name":"urothelial papilloma","termid":"MONDO:0004041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted urothelial papilloma","secondary_identifiers":["MEDGEN:233583","UMLS:C1334282","ONCOTREE:IUP"],"synonyms":[{"name":"IUP","type":"related"},{"name":"inverted papilloma of urinary tract","type":"exact"},{"name":"inverted urothelial papilloma","type":"exact"},{"name":"urinary tract inverted papilloma","type":"exact"},{"name":"urothelium inverted papilloma","type":"exact"}],"termid":"MONDO:0021109","xrefs":{"Monarch":{"xref_id":"0021109"}}}


id: PBO:0039028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 4","termid":"PBO:0039028"}


id: GO:0008794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arsenate + reduced glutaredoxin = arsenite + oxidized glutaredoxin. Glutaredoxin functions as the electron donor for arsenate reduction. The electron flow therefore is ( NADPH -> glutathione reductase (EC:1.6.4.2) -> ) glutathione -> glutaredoxin -> arsenate reductase, i.e. glutathione is reduced by glutathione reductase and glutaredoxin is reduced by glutathione.","definition_xrefs":["EC:1.20.4.1","GOC:kd","PMID:10593884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor","termid":"GO:0030614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"arsenate reductase (glutaredoxin) activity","secondary_identifiers":["RHEA:22016","UM-BBD_reactionID:r0635","MetaCyc:RXN-982"],"synonyms":[{"name":"glutharedoxin:arsenate oxidoreductase activity","type":"related"}],"termid":"GO:0008794"}


id: GO:0001766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clustering and aggregation of a membrane into domains. This serves as a mechanism to compartmentalize cellular activities and to establish cell polarity.","definition_xrefs":["PMID:12615889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft distribution","termid":"GO:0031580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"membrane raft polarization","synonyms":[{"name":"lipid raft polarization","type":"exact"},{"name":"membrane polarization","type":"exact"}],"termid":"GO:0001766"}


id: PBO:0051465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-20 (pseudogene)","termid":"PBO:0051465"}


id: RO:0002439
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship involving a predation process, where the subject kills the target in order to eat it or to feed to siblings, offspring or group members","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preys_on","termid":"RO:0002439"}


id: MONDO:0019303
data:
  {"annotated_genes":["SJAG_00120","SJAG_00660","SJAG_00566","SJAG_01836","SJAG_04934","SJAG_03125","SJAG_03898","SJAG_02396","SJAG_03457","SJAG_02200","SJAG_05329","SJAG_02362","SJAG_04631","SJAG_04995","SJAG_05979","SJAG_04540","SJAG_04114","SJAG_02818","SJAG_01745","SJAG_02194","SJAG_01378","SJAG_03855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87030,87029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[86664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015026"},{"annotations":[86359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957264"},{"annotations":[85837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019569"},{"annotations":[85872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019570"},{"annotations":[85705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007485"},{"annotations":[84906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014690"},{"annotations":[85951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008030"},{"annotations":[84865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"},{"annotations":[85755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014157"},{"annotations":[86316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859147"},{"annotations":[86687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010457"},{"annotations":[86362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957261"},{"annotations":[86361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957263"},{"annotations":[86130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957294"},{"annotations":[85961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013878"},{"annotations":[85090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014612"},{"annotations":[86924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030690"},{"annotations":[86425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013755"},{"annotations":[86629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016368"},{"annotations":[84864,84863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016369"},{"annotations":[86640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010196"},{"annotations":[85963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009910"}]},"cv_name":"mondo","definition":"Changes in the organism associated with senescence, occurring at an accelerated rate.","definition_xrefs":["MESH:D019588"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00566":null,"SJAG_00660":null,"SJAG_01378":null,"SJAG_01745":null,"SJAG_01836":null,"SJAG_02194":null,"SJAG_02200":null,"SJAG_02362":null,"SJAG_02396":null,"SJAG_02818":null,"SJAG_03125":null,"SJAG_03457":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_04114":null,"SJAG_04540":null,"SJAG_04631":null,"SJAG_04934":null,"SJAG_04995":null,"SJAG_05329":null,"SJAG_05979":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"is_obsolete":false,"name":"premature aging syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10063493","MEDGEN:65416","Orphanet:79389","UMLS:C0231341","GARD:19017"],"synonyms":[{"name":"premature ageing","type":"related"},{"name":"premature aging","type":"related"}],"termid":"MONDO:0019303","terms_by_termid":{"MONDO:0007485":null,"MONDO:0008030":null,"MONDO:0009053":null,"MONDO:0009910":null,"MONDO:0010196":null,"MONDO:0010457":null,"MONDO:0013755":null,"MONDO:0013878":null,"MONDO:0014157":null,"MONDO:0014612":null,"MONDO:0014690":null,"MONDO:0015026":null,"MONDO:0016368":null,"MONDO:0016369":null,"MONDO:0019569":null,"MONDO:0019570":null,"MONDO:0030690":null,"MONDO:0800029":null,"MONDO:0859147":null,"MONDO:0957261":null,"MONDO:0957263":null,"MONDO:0957264":null,"MONDO:0957294":null},"xrefs":{"Monarch":{"xref_id":"0019303"}}}


id: GO:0008155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete larval behavior (sensu Drosophila) (obsolete GO:0008155)","synonyms":[{"name":"larval behavior (sensu Drosophila)","type":"exact"}],"termid":"GO:0008155"}


id: GO:0043079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of an antipodal cell, one of three cells of the embryo sac in angiosperms, found at the chalazal end of the embryo away from the point of entry of the pollen tube, and its descendents.","definition_xrefs":["CL:0000537","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megasporocyte nucleus","termid":"GO:0043076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"antipodal cell nucleus","termid":"GO:0043079"}


id: MONDO:0012221
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84973],"is_not":false,"summary":null,"term":"MONDO:0012221"}]},"cv_name":"mondo","definition":"Alpha-N-acetylgalactosaminidase (NAGA) deficiency type 1 is a very rare and severe type of NAGA deficiency characterized by infantile neuroaxonal dystrophy.","definition_xrefs":["Orphanet:79279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-N-acetylgalactosaminidase deficiency","termid":"MONDO:0017779"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0002561"],"is_obsolete":false,"name":"alpha-N-acetylgalactosaminidase deficiency type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:373113","NANDO:1200135","SCTID:879937000","OMIM:609241","icd11.foundation:1058486825","UMLS:C1836544","GARD:116","DOID:0112318"],"synonyms":[{"name":"Alpha-N-acetylgalactosaminidase deficiency, type 1","type":"related"},{"name":"Alpha-N-acetylgalactosaminidase deficiency, type 3","type":"related"},{"name":"N-acetyl-alpha-D-galactosaminidase deficiency type III","type":"related"},{"name":"NAGA deficiency type 1","type":"exact"},{"name":"NAGA deficiency, type 1","type":"related"},{"name":"NAGA deficiency, type 3","type":"related"},{"name":"Schindler disease type 1","type":"exact"},{"name":"Schindler disease type I","type":"related"},{"name":"Schindler disease, type 1","type":"related"},{"name":"Schindler disease, type 3","type":"related"},{"name":"Schindler disease, type I","type":"related"},{"name":"Schindler disease, type III","type":"exact"},{"name":"alpha-N-acetylgalactosaminidase deficiency, type 1","type":"related"},{"name":"neuroaxonal dystrophy, Schindler type","type":"related"}],"termid":"MONDO:0012221","terms_by_termid":{"MONDO:0012221":null},"xrefs":{"Monarch":{"xref_id":"0012221"}}}


id: PBO:0085185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of three repressible acid phosphatases; glycoprotein that is transported to the cell surface by the secretory pathway; pregulated by phosphate starvation; PHO12 has a paralog, PHO11, that arose from a segmental duplication","termid":"PBO:0085185"}


id: GO:0052406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving carbohydrates within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont carbohydrate (obsolete GO:0052406)","termid":"GO:0052406"}


id: PBO:0062045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 32 pseudogene","termid":"PBO:0062045"}


id: PBO:0076785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-2,3-enoyl-CoA reductase","termid":"PBO:0076785"}


id: PBO:0055865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 12","termid":"PBO:0055865"}


id: MONDO:0971094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyvalvular heart disease syndrome","termid":"MONDO:0016460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac anomalies-short stature-joint hypermobility-facial dysmorphism syndrome due to TAB2 mutation","secondary_identifiers":["Orphanet:664401","UMLS:C5925073","MEDGEN:1863549"],"termid":"MONDO:0971094","xrefs":{"Monarch":{"xref_id":"0971094"}}}


id: MONDO:0006851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serious condition in which a newborn breathes a mixture of meconium (the first intestinal discharge) and amniotic fluid into the lungs around the time of delivery. Meconium aspiration syndrome occurs in 5-10 percent of births and typically occurs when the infant is stressed, as when the infant is past its due date.","definition_xrefs":["NCIT:C87093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal aspiration syndrome","termid":"MONDO:0024263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meconium aspiration syndrome","secondary_identifiers":["ICD9:770.1","Orphanet:70588","EFO:1001037","DOID:11049","UMLS:C0025048","MEDGEN:6258","MESH:D008471","MedDRA:10027057","SCTID:206292002","icd11.foundation:872221482","GARD:10494"],"synonyms":[{"name":"MAS","type":"exact"},{"name":"aspiration syndrome, meconium","type":"related"},{"name":"aspiration, meconium","type":"related"},{"name":"meconium aspiration","type":"exact"},{"name":"meconium aspiration syndrome","type":"exact"},{"name":"meconium inhalation","type":"related"},{"name":"neonatal aspiration of meconium","type":"exact"},{"name":"syndrome, meconium aspiration","type":"related"}],"termid":"MONDO:0006851","xrefs":{"Monarch":{"xref_id":"0006851"}}}


id: GO:0018158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by oxidation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein oxidation","synonyms":[{"name":"protein amino acid oxidation","type":"exact"}],"termid":"GO:0018158"}


id: SO:0001182
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory sequence found in the 5' and 3' UTRs of many mRNAs which encode iron-binding proteins. It has a hairpin structure and is recognized by trans-acting proteins known as iron-regulatory proteins.","definition_xrefs":["PMID:8710843","PMID:3198610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_region","termid":"SO:0000837"},{"relation_name":"part_of","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron_responsive_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Iron_responsive_element"],"synonyms":[{"name":"IRE","type":"exact"},{"name":"iron responsive element","type":"exact"}],"termid":"SO:0001182"}


id: GO:0019922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent linking of a chromophore to a protein via peptidyl-cysteines.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-cysteine (obsolete GO:0019922)","termid":"GO:0019922"}


id: PBO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates rhp51","termid":"PBO:0002102"}


id: GO:0070758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070758"}


id: GO:0090266
data:
  {"annotated_genes":["SJAG_02336","SJAG_01297","SJAG_02451","SJAG_03353","SJAG_04259","SJAG_03126","SJAG_01679","SJAG_00883","SJAG_03681","SJAG_01837","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113570,90516,107029,99392,108049,114058,111752,115693,103686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[93994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[116467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the mitotic cell cycle spindle assembly checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic nuclear division","termid":"GO:0007088"},{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid separation","termid":"GO:0010965"},{"relation_name":"is_a","term_name":"regulation of mitotic metaphase/anaphase transition","termid":"GO:0030071"},{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid segregation","termid":"GO:0033047"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle checkpoint","termid":"GO:1903504"},{"relation_name":"regulates","term_name":"mitotic spindle assembly checkpoint signaling","termid":"GO:0007094"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0000070","GO:0008150","GO:0044772","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic cell cycle spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090266","terms_by_termid":{"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: GO:0005920
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septate junction that lacks the regular arrays of electron-dense septae found in pleated septate junctions.","definition_xrefs":["PMID:11700298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septate junction","termid":"GO:0005918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"smooth septate junction","synonyms":[{"name":"zonula continua","type":"exact"}],"termid":"GO:0005920"}


id: PBO:0066631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab interacting lysosomal protein","termid":"PBO:0066631"}


id: PBO:0001992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc17","termid":"PBO:0001992"}


id: CHEBI:3312
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium dichloride","termid":"CHEBI:3312"}


id: MONDO:0013176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Weill-Marchesani syndrome","termid":"MONDO:0018096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weill-Marchesani 4 syndrome, recessive","secondary_identifiers":["UMLS:C2750787","Orphanet:363992","MEDGEN:416383","MESH:C567710","GARD:17579","OMIM:613195"],"synonyms":[{"name":"15q26.3 microdeletion syndrome","type":"exact"},{"name":"WMS4","type":"exact"},{"name":"Weill-Marchesani syndrome 4","type":"exact"},{"name":"Weill-Marchesani-like syndrome","type":"exact"},{"name":"ichthyosis-short stature-brachydactyly-microspherophakia syndrome","type":"exact"}],"termid":"MONDO:0013176","xrefs":{"Monarch":{"xref_id":"0013176"}}}


id: PBO:0028135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snoRNA_guided_rRNA_pseudouridine_synthesis_abolished_at_specific_site","termid":"PBO:0028135"}


id: PBO:0089271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit D","termid":"PBO:0089271"}


id: MONDO:0024677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An insulin-producing neuroendocrine tumor arising from the beta cells of the pancreas. Patients exhibit symptoms related to hypoglycemia due to inappropriate secretion of insulin.","definition_xrefs":["NCIT:C95598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic insulin-producing neuroendocrine tumor","termid":"MONDO:0005048"},{"relation_name":"is_a","term_name":"functional pancreatic neuroendocrine tumor","termid":"MONDO:0023206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic insulinoma","secondary_identifiers":["UMLS:C0021670","MEDGEN:43907","NANDO:2200398","SCTID:302822000","DOID:3892","HP:0012197","MedDRA:10022498","MESH:D007340"],"synonyms":[{"name":"Insulinomas","type":"related"},{"name":"Insulomas","type":"related"},{"name":"adenoma, beta cell","type":"related"},{"name":"adenoma, beta-cell","type":"related"},{"name":"adenomas, beta-cell","type":"related"},{"name":"beta cell tumor","type":"related"},{"name":"beta cell tumour","type":"related"},{"name":"beta-cell adenoma","type":"related"},{"name":"beta-cell adenomas","type":"related"},{"name":"beta-cell tumor","type":"related"},{"name":"beta-cell tumors","type":"related"},{"name":"beta-cell tumour","type":"related"},{"name":"beta-cell tumours","type":"related"},{"name":"insulin-producing tumour of islet cells","type":"related"},{"name":"insulinoma","type":"exact"},{"name":"insulinoma tumor suppressor GENE locus","type":"related"},{"name":"insulinoma tumour suppressor GENE locus","type":"related"},{"name":"insuloma","type":"related"},{"name":"islet cell adenoma","type":"related"},{"name":"pancreatic insulinoma","type":"exact"},{"name":"tumor, beta-cell","type":"related"},{"name":"tumors, beta-cell","type":"related"}],"termid":"MONDO:0024677","xrefs":{"Monarch":{"xref_id":"0024677"}}}


id: PBO:0065328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 52, pseudogene","termid":"PBO:0065328"}


id: PBO:0064794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1L divergent transcript","termid":"PBO:0064794"}


id: PBO:0073942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 18 member B1","termid":"PBO:0073942"}


id: GO:1900612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving F-9775B.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"F-9775B metabolic process","synonyms":[{"name":"F-9775B metabolism","type":"exact"}],"termid":"GO:1900612"}


id: MONDO:1011008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peripheral neuropathy that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy, non-human animal","termid":"MONDO:1010239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral neuropathy, pig","secondary_identifiers":["OMIA:001150-9823"],"termid":"MONDO:1011008","xrefs":{"Monarch":{"xref_id":"1011008"}}}


id: GO:1905876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of postsynaptic density organization.","definition_xrefs":["PMID:21887379","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of postsynaptic density organization","termid":"GO:1905874"},{"relation_name":"positively_regulates","term_name":"postsynaptic density organization","termid":"GO:0097106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of postsynaptic density organization","synonyms":[{"name":"activation of PSD organization","type":"narrow"},{"name":"activation of post synaptic density organization","type":"narrow"},{"name":"activation of post-synaptic density organization","type":"narrow"},{"name":"activation of postsynaptic density organisation","type":"narrow"},{"name":"activation of postsynaptic density organization","type":"narrow"},{"name":"positive regulation of PSD organization","type":"exact"},{"name":"positive regulation of post synaptic density organization","type":"exact"},{"name":"positive regulation of post-synaptic density organization","type":"exact"},{"name":"positive regulation of postsynaptic density organisation","type":"exact"},{"name":"up regulation of PSD organization","type":"exact"},{"name":"up regulation of post synaptic density organization","type":"exact"},{"name":"up regulation of post-synaptic density organization","type":"exact"},{"name":"up regulation of postsynaptic density organisation","type":"exact"},{"name":"up regulation of postsynaptic density organization","type":"exact"},{"name":"up-regulation of PSD organization","type":"exact"},{"name":"up-regulation of post synaptic density organization","type":"exact"},{"name":"up-regulation of post-synaptic density organization","type":"exact"},{"name":"up-regulation of postsynaptic density organisation","type":"exact"},{"name":"up-regulation of postsynaptic density organization","type":"exact"},{"name":"upregulation of PSD organization","type":"exact"},{"name":"upregulation of post synaptic density organization","type":"exact"},{"name":"upregulation of post-synaptic density organization","type":"exact"},{"name":"upregulation of postsynaptic density organisation","type":"exact"},{"name":"upregulation of postsynaptic density organization","type":"exact"}],"termid":"GO:1905876"}


id: PBO:0050333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 35","termid":"PBO:0050333"}


id: PBO:0116640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF interacting protein 1","termid":"PBO:0116640"}


id: PBO:0111349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp10","termid":"PBO:0111349"}


id: PBO:0110107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane 1-phosphatidylinositol 4-kinase, type III-alpha Stt4","termid":"PBO:0110107"}


id: PBO:0076582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 7","termid":"PBO:0076582"}


id: PBO:0086845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pyridoxal kinase; a key enzyme involved in pyridoxal 5'-phosphate synthesis, the active form of vitamin B6; required for genome integrity; involved in bud-site selection; similarity to yeast BUD17 and human pyridoxal kinase (PDXK)","termid":"PBO:0086845"}


id: GO:0046457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of prostanoids, any compound based on or derived from the prostanoate structure.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"},{"relation_name":"is_a","term_name":"prostanoid metabolic process","termid":"GO:0006692"},{"relation_name":"is_a","term_name":"icosanoid biosynthetic process","termid":"GO:0046456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"prostanoid biosynthetic process","secondary_identifiers":["Wikipedia:Prostanoid#Biosynthesis","Reactome:R-HSA-2162123"],"synonyms":[{"name":"prostanoid anabolism","type":"exact"},{"name":"prostanoid biosynthesis","type":"exact"},{"name":"prostanoid formation","type":"exact"},{"name":"prostanoid synthesis","type":"exact"}],"termid":"GO:0046457"}


id: MONDO:1010072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor X deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor X deficiency, non-human animal","secondary_identifiers":["OMIA:000362"],"termid":"MONDO:1010072","xrefs":{"Monarch":{"xref_id":"1010072"}}}


id: MONDO:0800195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achalasia-alacrima syndrome","synonyms":[{"name":"AAAS","type":"exact"}],"termid":"MONDO:0800195","xrefs":{"Monarch":{"xref_id":"0800195"}}}


id: GO:0017103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 1-phosphate + UTP = diphosphate + UDP-D-galactose.","definition_xrefs":["EC:2.7.7.10","RHEA:14209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTP-monosaccharide-1-phosphate uridylyltransferase activity","termid":"GO:0051748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"UTP:galactose-1-phosphate uridylyltransferase activity","secondary_identifiers":["GO:0003982","MetaCyc:UTPHEXPURIDYLYLTRANS-RXN","KEGG_REACTION:R00502"],"synonyms":[{"name":"Gal-1-P uridylyltransferase activity","type":"broad"},{"name":"UDPgalactose pyrophosphorylase activity","type":"related"},{"name":"UTP-hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UTP:alpha-D-hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UTP:hexose-1-phosphate uridylyltransferase activity","type":"broad"},{"name":"alpha-D-galactose 1-phosphate uridylyltransferase activity","type":"related"},{"name":"galactose 1-phosphate uridyltransferase activity","type":"related"},{"name":"galactose 1-phosphate uridylyltransferase activity","type":"related"},{"name":"galactose-1-phosphate uridylyltransferase activity","type":"broad"},{"name":"uridine diphosphate galactose pyrophosphorylase activity","type":"related"},{"name":"uridine diphosphogalactose pyrophosphorylase activity","type":"related"}],"termid":"GO:0017103"}


id: PBO:0068807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 44, pseudogene","termid":"PBO:0068807"}


id: GO:0180040
data:
  {"annotated_genes":["SJAG_02233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106935],"is_not":false,"summary":null,"term":"GO:0180040"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a pheromone response MAPK cascade.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of pheromone response MAPK cascade","termid":"GO:0180039"},{"relation_name":"negatively_regulates","term_name":"pheromone response MAPK cascade","termid":"GO:0071507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of pheromone response MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180040","terms_by_termid":{"GO:0180040":null}}


id: PBO:0052328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1614","termid":"PBO:0052328"}


id: PBO:0057813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3134","termid":"PBO:0057813"}


id: SO:0000179
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The start of the clone insert.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"clone_insert","termid":"SO:0000753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clone_insert_start","synonyms":[{"name":"clone insert start","type":"exact"}],"termid":"SO:0000179"}


id: PBO:0005341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N7-)-methyltransferase catalytic subunit Trm8 (predicted)","termid":"PBO:0005341"}


id: PBO:0029694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lobate_nuclear_envelope","termid":"PBO:0029694"}


id: MONDO:0850519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An amino acid metabolic disorder that are characterized phenotypically by hyperphenylalaninemia, depletion of the neurotransmitters dopamine and serotonin, and progressive cognitive and motor deficits and that has material basis in autosomal recessive mutations in the genes encoding enzymes involved in the synthesis or regeneration of BH4.","definition_xrefs":["DOID:0081132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"tetrahydrobiopterin (BH4)-deficient hyperphenylalaninemia","termid":"MONDO:0850519","xrefs":{"Monarch":{"xref_id":"0850519"}}}


id: PBO:0034368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_substance_that_treats","termid":"PBO:0034368"}


id: PBO:0030745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_phosphatidylinositol-3-phosphate_level","termid":"PBO:0030745"}


id: GO:0097527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals which triggers the necroptotic death of a cell. The pathway starts with reception of a signal, is characterized by activation of receptor-interacting serine/threonine-protein kinase 1 and/or 3 (RIPK1/3, also called RIP1/3), and ends when the execution phase of necroptosis is triggered.","definition_xrefs":["GOC:mtg_apoptosis","PMID:20823910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"necroptotic signaling pathway","synonyms":[{"name":"necroptosis signaling","type":"related"},{"name":"necroptosis signaling pathway","type":"exact"},{"name":"necroptotic signal transduction","type":"exact"},{"name":"necroptotic signalling pathway","type":"related"}],"termid":"GO:0097527"}


id: MONDO:0010370
data:
  {"annotated_genes":["SJAG_01831"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86828],"is_not":false,"summary":null,"term":"MONDO:0010370"}]},"cv_name":"mondo","definition":"An X-linked inherited form of Cornelia De Lange syndrome caused by mutations in the SMC1A gene mapped to chromosome Xp11.22. Patients have a milder form of the syndrome compared to patients with the NIPBL gene mutation.","definition_xrefs":["NCIT:C75485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cornelia de Lange syndrome","termid":"MONDO:0016033"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01831":null},"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:300590","DOID:0080506","GARD:15259","UMLS:C1802395","MEDGEN:315658"],"synonyms":[{"name":"CDLS2","type":"related"},{"name":"Cdls, X-linked","type":"related"},{"name":"Cornelia DE Lange syndrome 2","type":"related"},{"name":"Cornelia De Lange syndrome type 2","type":"exact"},{"name":"Cornelia De Lange syndrome, X-linked","type":"related"},{"name":"Cornelia de Lange syndrome 2","type":"exact"},{"name":"Cornelia de Lange syndrome 2, X-linked dominant","type":"exact"},{"name":"Cornelia de Lange syndrome caused by mutation in SMC1A","type":"exact"},{"name":"SMC1A Cornelia de Lange syndrome","type":"exact"},{"name":"X-linked Cornelia De Lange syndrome","type":"exact"}],"termid":"MONDO:0010370","terms_by_termid":{"MONDO:0010370":null},"xrefs":{"Monarch":{"xref_id":"0010370"}}}


id: FYPO:0006431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle pole body is larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"enlarged mitotic spindle pole body","synonyms":[{"name":"enlarged mitotic SPB","type":"exact"},{"name":"enlarged spindle pole body during mitotic cell cycle","type":"exact"},{"name":"enlarged spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0006431"}


id: GO:0003755
data:
  {"annotated_genes":["SJAG_02308","SJAG_03905","SJAG_03238","SJAG_00470","SJAG_02620","SJAG_04155","SJAG_02551","SJAG_04352","SJAG_00078","SJAG_00950","SJAG_01246","SJAG_03601","SJAG_00602","SJAG_01005","SJAG_02413","SJAG_01270","SJAG_01714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57675,57903,63589,63715,64660,69830,71531,71631,72421,75138,75494,75750,77707,77725,77793,80066,92563],"is_not":false,"summary":null,"term":"GO:0003755"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).","definition_xrefs":["EC:5.2.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00470":null,"SJAG_00602":null,"SJAG_00950":null,"SJAG_01005":null,"SJAG_01246":null,"SJAG_01270":null,"SJAG_01714":null,"SJAG_02308":null,"SJAG_02413":null,"SJAG_02551":null,"SJAG_02620":null,"SJAG_03238":null,"SJAG_03601":null,"SJAG_03905":null,"SJAG_04155":null,"SJAG_04352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0004752","GO:0042028","MetaCyc:PEPTIDYLPROLYL-ISOMERASE-RXN","Reactome:R-HSA-2022073","Reactome:R-HSA-9626816","RHEA:16237"],"synonyms":[{"name":"FK506-sensitive peptidyl-prolyl cis-trans isomerase","type":"narrow"},{"name":"PPIase activity","type":"related"},{"name":"cis-trans proline isomerase activity","type":"exact"},{"name":"cyclophilin activity","type":"related"},{"name":"cyclophilin-type peptidyl-prolyl cis-trans isomerase activity","type":"narrow"},{"name":"immunophilin","type":"related"},{"name":"juglone-sensitive cis-trans proline isomerase activity","type":"narrow"},{"name":"juglone-sensitive peptidyl-prolyl cis-trans isomerase activity","type":"narrow"},{"name":"parvulin","type":"related"},{"name":"peptide bond isomerase activity","type":"related"},{"name":"peptidyl-prolyl isomerase B reaction","type":"related"},{"name":"peptidylproline cis-trans-isomerase activity","type":"related"},{"name":"peptidylprolyl cis-trans isomerase activity","type":"related"},{"name":"peptidylprolyl isomerase activity","type":"related"},{"name":"rotamase activity","type":"related"}],"termid":"GO:0003755","terms_by_termid":{"GO:0003755":null}}


id: PBO:0076817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM3 antisense RNA 1","termid":"PBO:0076817"}


id: GO:0051237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which RNA is maintained in a location and prevented from moving elsewhere.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"},{"relation_name":"part_of","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of RNA location","synonyms":[{"name":"RNA retention","type":"exact"},{"name":"maintenance of RNA localization","type":"related"}],"termid":"GO:0051237"}


id: PBO:0086503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative precursor of the subtilisin-like protease III; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YSP3 has a paralog, PRB1, that arose from the whole genome duplication","termid":"PBO:0086503"}


id: PATO:0000879
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000879 fecundity value (obsolete PATO:0000879)","termid":"PATO:0000879"}


id: PBO:0052590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 1","termid":"PBO:0052590"}


id: PBO:0005000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen54 (predicted)","termid":"PBO:0005000"}


id: GO:0060058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process of mammary epithelial cells during mammary gland involution.","definition_xrefs":["GOC:mtg_apoptosis","PMID:15282149","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in morphogenesis","termid":"GO:1902339"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in mammary gland involution","termid":"GO:0060057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in mammary gland involution","synonyms":[{"name":"positive regulation of apoptosis involved in mammary gland involution","type":"narrow"}],"termid":"GO:0060058"}


id: PBO:0027642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_of_pheromone_response_gene_mRNA_during_vegetative_growth","termid":"PBO:0027642"}


id: GO:0102151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-oxo-myristate + H+ = 2-tridecanone + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-myristate decarboxylase activity (obsolete GO:0102151)","termid":"GO:0102151"}


id: GO:0043300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte degranulation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"regulates","term_name":"leukocyte degranulation","termid":"GO:0043299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of leukocyte degranulation","synonyms":[{"name":"regulation of immune cell degranulation","type":"exact"},{"name":"regulation of immune cell granule exocytosis","type":"exact"},{"name":"regulation of leucocyte degranulation","type":"exact"},{"name":"regulation of leukocyte granule exocytosis","type":"exact"}],"termid":"GO:0043300"}


id: GO:0090598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes by which anatomical structures that are only present in the male organism are generated and organized.","definition_xrefs":["GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"male sex differentiation","termid":"GO:0046661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male anatomical structure morphogenesis","termid":"GO:0090598"}


id: GO:0070537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein deubiquitination process in which a K63-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is removed from a lysine residue in histone H2A or the variant H2AX.","definition_xrefs":["PMID:19202061","GOC:mah","PMID:19214193"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A K63-linked deubiquitination (obsolete GO:0070537)","termid":"GO:0070537"}


id: GO:0046821
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"DNA structures that are not part of a chromosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal DNA","secondary_identifiers":["Wikipedia:Extrachromosomal_DNA"],"termid":"GO:0046821"}


id: MONDO:0019704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","secondary_identifiers":["Orphanet:93446"],"synonyms":[{"name":"primary osteodysplasia with decreased bone density","type":"exact"},{"name":"primary skeletal dysplasia with decreased bone density","type":"exact"}],"termid":"MONDO:0019704","xrefs":{"Monarch":{"xref_id":"0019704"}}}


id: PBO:0011087
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae URA1","termid":"PBO:0011087"}


id: MONDO:0043310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient complete or partial monocular blindness due to retinal ischemia. This may be caused by emboli from the CAROTID ARTERY (usually in association with CAROTID STENOSIS) and other locations that enter the central RETINAL ARTERY. (From Adams et al., Principles of Neurology, 6th ed, p245)","definition_xrefs":["MESH:D020757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blindness (disorder)","termid":"MONDO:0001941"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amaurosis fugax","secondary_identifiers":["SCTID:88032003","UMLS:C0149793","MEDGEN:57702","NCIT:C84550","icd11.foundation:691084626"],"synonyms":[{"name":"amaurosis fugax","type":"exact"},{"name":"amaurosis fugax (one sided temporary vision loss)","type":"related"},{"name":"blindness, monocular, transient","type":"related"},{"name":"blindness, transient monocular","type":"related"},{"name":"momentary blindness","type":"related"},{"name":"monocular blindness, transient","type":"related"},{"name":"transient monocular blindness","type":"related"}],"termid":"MONDO:0043310","xrefs":{"Monarch":{"xref_id":"0043310"}}}


id: PBO:0050841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IBA57 divergent transcript","termid":"PBO:0050841"}


id: GO:0102614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: germacra-1(10),4,11(13)-trien-12-oate + O2 + reduced [NADPH--hemoprotein reductase] = 8beta-hydroxygermacra-1(10),4,11(13)-trien-12-oate + H(+) + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:57964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"germacrene A acid 8beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-15460","EC:1.14.14.168"],"termid":"GO:0102614"}


id: SO:0002276
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short interspersed elements that originated from 5S rRNAs.","definition_xrefs":["PMID:21673742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SINE_element","termid":"SO:0000206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5S_SINE_retrotransposon","synonyms":[{"name":"5S SINE element","type":"exact"},{"name":"5S SINE retrotransposon","type":"exact"},{"name":"RSS retrotransposon","type":"exact"}],"termid":"SO:0002276"}


id: GO:0018878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-1,2,3,4,5,6-hexachlorocyclohexane that occur in presence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-1,2,3,4,5,6-hexachlorocyclohexane metabolic process","termid":"GO:0018877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerobic beta-1,2,3,4,5,6-hexachlorocyclohexane metabolic process","synonyms":[{"name":"aerobic beta-1,2,3,4,5,6-hexachlorocyclohexane metabolism","type":"exact"}],"termid":"GO:0018878"}


id: PBO:0053702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 904","termid":"PBO:0053702"}


id: PBO:0014604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease II (RNB) family, involved in nuclear-transcribed mRNA catabolic process (predicted)","termid":"PBO:0014604"}


id: PBO:0004177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor, Arf family Arf1","termid":"PBO:0004177"}


id: MONDO:0001103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection of the small intestine caused by the flagellated protozoan giardia lamblia. It is spread via contaminated food and water and by direct person-to-person contact.","definition_xrefs":["MESH:D005873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"},{"relation_name":"is_a","term_name":"parasitic intestinal disorder","termid":"MONDO:0024270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"giardiasis","secondary_identifiers":["MEDGEN:42213","icd11.foundation:433310499","SCTID:10679007","ICD9:007.1","UMLS:C0017536","DOID:10718"],"synonyms":[{"name":"Giardia","type":"related"},{"name":"Giardia infection","type":"exact"},{"name":"Giardiases","type":"related"},{"name":"Lambliases","type":"related"},{"name":"beaver feaver","type":"exact"},{"name":"infection by Giardia lamblia","type":"exact"},{"name":"infections, Giardia","type":"related"},{"name":"lambliasis","type":"related"}],"termid":"MONDO:0001103","xrefs":{"Monarch":{"xref_id":"0001103"}}}


id: MONDO:0006204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete extramammary Paget disease (obsolete MONDO:0006204)","termid":"MONDO:0006204","xrefs":{"Monarch":{"xref_id":"0006204"}}}


id: PBO:0055894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 14B","termid":"PBO:0055894"}


id: PBO:0113284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; mutations in membrane-spanning domains permit cation and histidinol uptake","termid":"PBO:0113284"}


id: PBO:0050624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid dehydrogenase like 2","termid":"PBO:0050624"}


id: FYPO:0000865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K9 trimethylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me3 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000865"}


id: PBO:0077625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 15C","termid":"PBO:0077625"}


id: PBO:0074025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 15 pseudogene 3","termid":"PBO:0074025"}


id: GO:0021867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The unequal mitotic division of a radial glial cell in the forebrain that gives rise to a radial glial cell and a post-mitotic neuronal progenitor.","definition_xrefs":["GOC:dgh","GOC:jid","GO_REF:0000021","PMID:16226447","GOC:dph","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete neuron-producing asymmetric radial glial cell division in forebrain (obsolete GO:0021867)","termid":"GO:0021867"}


id: PBO:0067925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 227","termid":"PBO:0067925"}


id: PBO:0072959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec1 family domain containing 1","termid":"PBO:0072959"}


id: MONDO:0012878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Cowden disease in which the cause of the disease is a mutation in the SDHB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cowden disease","termid":"MONDO:0016063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"Cowden syndrome 2","secondary_identifiers":["OMIM:612359","MESH:C567337"],"synonyms":[{"name":"CWS2","type":"related"},{"name":"Cowden disease caused by mutation in SDHB","type":"exact"},{"name":"Cowden syndrome 2","type":"exact"},{"name":"Cowden syndrome type 2","type":"exact"},{"name":"SDHB Cowden disease","type":"exact"}],"termid":"MONDO:0012878","xrefs":{"Monarch":{"xref_id":"0012878"}}}


id: GO:0051507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-glucose + a beta-sitosterol = UDP + O-glucosyl-beta-sitosterol.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-sitosterol UDP-glucosyltransferase activity (obsolete GO:0051507)","termid":"GO:0051507"}


id: PBO:0039160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 5","termid":"PBO:0039160"}


id: PATO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being abnormal and having a destructive effect on living tissue.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal","termid":"PATO:0000460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pathological","termid":"PATO:0001869"}


id: SO:0002361
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for cytosolic LSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_rRNA_gene","termid":"SO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_LSU_rRNA_gene","synonyms":[{"name":"cytosolic large subunit rRNA gene","type":"exact"}],"termid":"SO:0002361"}


id: GO:0034643
data:
  {"annotated_genes":["SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102557],"is_not":false,"summary":null,"term":"GO:0034643"}]},"cv_name":"biological_process","definition":"The directed movement of the mitochondrion to a specific location, by a process involving microtubules.","definition_xrefs":["PMID:12972644","GOC:mah","PMID:15979253","PMID:16306220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"establishment of mitochondrion localization","termid":"GO:0051654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of mitochondrion localization, microtubule-mediated","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of mitochondrion localisation, microtubule-mediated","type":"exact"},{"name":"microtubule-mediated mitochondrion localization","type":"exact"},{"name":"mitochondrial localization, microtubule-mediated","type":"exact"}],"termid":"GO:0034643","terms_by_termid":{"GO:0034643":null}}


id: PR:P87059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial intermembrane space import and assembly protein 40 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21622:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space import and assembly protein 40 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.11c","secondary_identifiers":["UniProtKB:P87059"],"synonyms":[{"name":"SPAC57A10.11c","type":"related"},{"name":"Spom972h-CHCHD4","type":"exact"},{"name":"mitochondrial import inner membrane translocase TIM40 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tim40","type":"related"}],"termid":"PR:P87059"}


id: MONDO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic leukemia","termid":"MONDO:0001014"},{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"chronic eosinophilic leukemia","secondary_identifiers":["ONCOTREE:CELNOS","Orphanet:168940","MedDRA:10065854","DOID:0080367","MESH:C580364","NCIT:C4563","UMLS:C0346421","MEDGEN:91106","GARD:20104","ICDO:9964/3","SCTID:188733003"],"synonyms":[{"name":"CEL","type":"exact"},{"name":"CEL/hypereosinophilic syndrome","type":"exact"},{"name":"CELNOS","type":"related"},{"name":"chronic eosinophilic leukemia","type":"exact"},{"name":"chronic eosinophilic leukemia/hypereosinophilic syndrome","type":"exact"},{"name":"eosinophilic leukaemia","type":"exact"},{"name":"eosinophilic leukemia","type":"exact"}],"termid":"MONDO:0015687","xrefs":{"Monarch":{"xref_id":"0015687"}}}


id: GO:1901822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving delta-carotene.","definition_xrefs":["GOC:TermGenie","GOC:yaf","MetaCyc:PWY-5946","PMID:8837512","UniPathway:UPA00801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"delta-carotene metabolic process","synonyms":[{"name":"delta-carotene metabolism","type":"exact"}],"termid":"GO:1901822"}


id: PBO:0075045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-8","termid":"PBO:0075045"}


id: GO:0030623
data:
  {"annotated_genes":["SJAG_04497","SJAG_00414"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75958,79036],"is_not":false,"summary":null,"term":"GO:0030623"}]},"cv_name":"molecular_function","definition":"Binding to a U5 small nuclear RNA (U5 snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00414":null,"SJAG_04497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"U5 snRNA binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0030623","terms_by_termid":{"GO:0030623":null}}


id: MONDO:0013215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the TPRN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 79","secondary_identifiers":["GARD:22633","DOID:0110526","MESH:C567651","OMIM:613307","MEDGEN:413222","UMLS:C2750082"],"synonyms":[{"name":"DFNB79","type":"narrow"},{"name":"TPRN autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 79","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 79","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in TPRN","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 79","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 79","type":"exact"},{"name":"deafness, autosomal recessive 79","type":"narrow"},{"name":"deafness, autosomal recessive type 79","type":"narrow"}],"termid":"MONDO:0013215","xrefs":{"Monarch":{"xref_id":"0013215"}}}


id: FYPO:0006161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is abolished during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin","termid":"FYPO:0001678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to chromatin during meiosis I","synonyms":[{"name":"abolished protein localisation to chromatin during meiosis I","type":"exact"},{"name":"abolished protein localization to chromatin during first meiotic nuclear division","type":"exact"},{"name":"protein localization to chromatin during meiosis I replication abolished","type":"exact"}],"termid":"FYPO:0006161"}


id: PBO:0056884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 pseudogene 4","termid":"PBO:0056884"}


id: MONDO:0019250
data:
  {"annotated_genes":["SJAG_04203","SJAG_05230","SJAG_01881"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"},{"annotations":[86336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044330"},{"annotations":[85297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01881":null,"SJAG_04203":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of biogenic amine metabolism and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681274","Orphanet:79214","GARD:18976","MEDGEN:1842301"],"synonyms":[{"name":"disorder of biogenic amine metabolism and transport","type":"related"}],"termid":"MONDO:0019250","terms_by_termid":{"MONDO:0012407":null,"MONDO:0015005":null,"MONDO:0044330":null},"xrefs":{"Monarch":{"xref_id":"0019250"}}}


id: GO:0006346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of constitutive heterochromatin by a pathway that includes methylation of genomic DNA such as CpG islands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive heterochromatin formation","termid":"GO:0140719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"DNA methylation-dependent constitutive heterochromatin formation","synonyms":[{"name":"DNA methylation-dependent heterochromatin assembly","type":"exact"},{"name":"DNA methylation-dependent heterochromatin formation","type":"exact"},{"name":"methylation-dependent chromatin silencing","type":"broad"},{"name":"methylation-dependent heterochromatic silencing","type":"broad"}],"termid":"GO:0006346"}


id: PBO:0060683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDRG family member 3","termid":"PBO:0060683"}


id: SO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon is changed, resulting in a premature stop codon, leading to a shortened polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"},{"relation_name":"is_a","term_name":"nonsynonymous_variant","termid":"SO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_gained","secondary_identifiers":["http://vat.gersteinlab.org/formats.php","loinc:LA6699-8","http://ensembl.org/info/genome/variation/prediction/predicted_data.html","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:stopgain","type":"exact"},{"name":"Jannovar:stop_gained","type":"exact"},{"name":"Seattleseq:stop-gained","type":"exact"},{"name":"Seattleseq:stop-gained-near-splice","type":"related"},{"name":"VAAST:stop_gained","type":"exact"},{"name":"VAT:prematureStop","type":"exact"},{"name":"VEP:stop_gained","type":"exact"},{"name":"nonsense","type":"exact"},{"name":"nonsense codon","type":"exact"},{"name":"snpEff:STOP_GAINED","type":"exact"},{"name":"stop codon gained","type":"related"},{"name":"stop gained","type":"exact"}],"termid":"SO:0001587"}


id: PBO:0018148
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective entrance Into Mitosis","termid":"PBO:0018148"}


id: GO:0102138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O2 + reduced [NADPH--hemoprotein reductase] + typhasterol = 7-oxatyphasterol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 7-oxatyphasterol synthase activity (obsolete GO:0102138)","termid":"GO:0102138"}


id: PBO:0056496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 1","termid":"PBO:0056496"}


id: PBO:0027355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pyruvate_decarboxylase_activity","termid":"PBO:0027355"}


id: GO:0010901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of very-low-density lipoprotein particle remodeling. Very-low-density lipoprotein particle remodeling is the acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"very-low-density lipoprotein particle remodeling","termid":"GO:0034372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of very-low-density lipoprotein particle remodeling","synonyms":[{"name":"regulation of VLDL remodeling","type":"exact"},{"name":"regulation of VLDL remodelling","type":"exact"},{"name":"regulation of very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0010901"}


id: GO:0019901
data:
  {"annotated_genes":["SJAG_01245","SJAG_06592"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043424"},{"annotations":[70840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034236"}]},"cv_name":"molecular_function","definition":"Binding to a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase binding","termid":"GO:0019900"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"protein kinase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0019901","terms_by_termid":{"GO:0034236":null,"GO:0043424":null}}


id: PBO:0030834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_5-phosphoribosyl_diphosphate_level","termid":"PBO:0030834"}


id: MONDO:1010508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebral amyloid angiopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy, non-human animal","termid":"MONDO:1010028"},{"relation_name":"is_a","term_name":"amyloidosis, dog","termid":"MONDO:1011467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral amyloid angiopathy, dog","secondary_identifiers":["OMIA:002138-9615"],"termid":"MONDO:1010508","xrefs":{"Monarch":{"xref_id":"1010508"}}}


id: GO:0022606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the polarity of a cell along its proximal/distal axis.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of monopolar cell polarity","termid":"GO:0061162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of proximal/distal cell polarity","termid":"GO:0022606"}


id: GO:1905822
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905824"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic sister chromatid arm separation.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:18765790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid separation","termid":"GO:0010965"},{"relation_name":"regulates","term_name":"mitotic sister chromatid arm separation","termid":"GO:1990891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic sister chromatid arm separation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905822","terms_by_termid":{"GO:1905824":null}}


id: PBO:0044652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 3","termid":"PBO:0044652"}


id: PBO:0061649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 21","termid":"PBO:0061649"}


id: PBO:0069660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 937, pseudogene","termid":"PBO:0069660"}


id: GO:0003406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the retinal pigment epithelium over time, from its initial formation to the mature structure. The retinal pigment epithelium is the melanin-containing layer of cells between the retina and the choroid that absorbs scattered and reflected light and removes waste products produced by the photoreceptor cells.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal pigment epithelium development","synonyms":[{"name":"RPE development","type":"related"}],"termid":"GO:0003406"}


id: MONDO:0008249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hair-containing cyst or sinus, occurring chiefly in the coccygeal region.","definition_xrefs":["MESH:D010864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pilonidal sinus","secondary_identifiers":["OMIM:173000","HP:0010769","MEDGEN:19314","SCTID:47639008","UMLS:C0031925"],"synonyms":[{"name":"pilonidal sinus","type":"exact"},{"name":"pilonidal sinus (disease)","type":"exact"}],"termid":"MONDO:0008249","xrefs":{"Monarch":{"xref_id":"0008249"}}}


id: GO:0098678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which the range of hosts which a virus can bind and infect is changed. Examples include phages that switch between types of fibers via the action of a virally encoded invertase.","definition_xrefs":["VZ:4498","PMID:6232613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral tropism switching","termid":"GO:0098678"}


id: MOD:00392
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-decanoyl-L-threonine.","definition_xrefs":["RESID:AA0387","Unimod:449#T","PubMed:11546772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-decanoylated residue","termid":"MOD:00668"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-decanoyl-L-threonine","synonyms":[{"name":"(2S)-2-amino-3-(decanoyloxy)propanoic acid","type":"exact"},{"name":"Decanoyl","type":"related"},{"name":"L-threonine decanoate ester","type":"exact"},{"name":"LIPID O-decanoyl threonine","type":"exact"},{"name":"O-decanoyl-L-threonine","type":"exact"},{"name":"O-decanoylated L-threonine","type":"exact"},{"name":"O3-decanoyl-L-threonine","type":"exact"},{"name":"ODecThr","type":"exact"},{"name":"lipid","type":"related"}],"termid":"MOD:00392"}


id: SO:0000622
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA polymerase III type 1 promoter with consensus sequence CAnnCCn.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_1","termid":"SO:0000617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_box","synonyms":[{"name":"C-box","type":"exact"}],"termid":"SO:0000622"}


id: PBO:0088386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein disulfide isomerase","termid":"PBO:0088386"}


id: PBO:0043164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIDEC pseudogene 1","termid":"PBO:0043164"}


id: GO:1903127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of centriole-centriole cohesion.","definition_xrefs":["GO_REF:0000058","PMID:24554434","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007049","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"positive regulation of centriole-centriole cohesion","synonyms":[{"name":"activation of centriole-centriole cohesion","type":"narrow"},{"name":"up regulation of centriole-centriole cohesion","type":"exact"},{"name":"up-regulation of centriole-centriole cohesion","type":"exact"},{"name":"upregulation of centriole-centriole cohesion","type":"exact"}],"termid":"GO:1903127"}


id: PBO:0034605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G2_DNA_damage_checkpoint_during_cellular_response_to_UV_during_mitotic_S_phase","termid":"PBO:0034605"}


id: PBO:0064722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 58","termid":"PBO:0064722"}


id: PBO:0082350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the SFI superfamily; involved in nonsense mediated mRNA decay; required for efficient translation termination at nonsense codons and targeting of NMD substrates to P-bodies; binds to the small ribosomal subunit via an interaction with Rps26; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0082350"}


id: PBO:0051098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin mu DNA binding protein 2","termid":"PBO:0051098"}


id: PBO:0045970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early growth response 3","termid":"PBO:0045970"}


id: PBO:0055911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 34 pseudogene 2","termid":"PBO:0055911"}


id: PBO:0034293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-attached_to","termid":"PBO:0034293"}


id: PBO:0078716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 1-1","termid":"PBO:0078716"}


id: PBO:0069129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 379, pseudogene","termid":"PBO:0069129"}


id: PBO:0035711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9K14_acetylation_during_vegetative_growth","termid":"PBO:0035711"}


id: GO:0044794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism activates or increases the frequency, rate or extent of the release of a process being mediated by a virus with which it is infected.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral process","termid":"GO:0044788"},{"relation_name":"positively_regulates","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by host of viral process","termid":"GO:0044794"}


id: PBO:0066027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 10","termid":"PBO:0066027"}


id: PBO:0005535
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SUP35","termid":"PBO:0005535"}


id: GO:1902475
data:
  {"annotated_genes":["SJAG_03256","SJAG_00991","SJAG_00522","SJAG_03400","SJAG_00626","SJAG_05346","SJAG_04637","SJAG_03899","SJAG_02716","SJAG_00543","SJAG_04725","SJAG_03591","SJAG_02029","SJAG_02605","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95816],"is_not":false,"summary":null,"term":"GO:1902475"},{"annotations":[100160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[97151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[103623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[98624,63278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[96352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[98024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[103625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[96353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"},{"annotations":[97152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[103626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[100161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[103627,102595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[97153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[109822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[103629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[103630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[107702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"},{"annotations":[87879],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[98679,91537,110333,93131],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[91538,93132,98680],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[93133],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"The directed movement of L-alpha-amino acid across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["PMID:14668347","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00991":null,"SJAG_02029":null,"SJAG_02605":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03591":null,"SJAG_03899":null,"SJAG_03970":null,"SJAG_04637":null,"SJAG_04725":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"L-alpha-amino acid transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1902475","terms_by_termid":{"GO:0015813":null,"GO:0070778":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0097638":null,"GO:0097639":null,"GO:0110141":null,"GO:1901482":null,"GO:1902475":null,"GO:1903826":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1990575":null,"GO:1990818":null}}


id: GO:1901947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolic process","synonyms":[{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolism","type":"exact"}],"termid":"GO:1901947"}


id: PBO:0080774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 5","termid":"PBO:0080774"}


id: PBO:0040321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit epsilon","termid":"PBO:0040321"}


id: FYPO:0006745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the thickness of the cell wall is abnormal. The wall may be uniformly thicker or thinner than normal, or thickness may be irregular.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology during vegetative growth","termid":"FYPO:0000351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002946","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell wall thickness during vegetative growth","synonyms":[{"name":"abnormal cell wall thickness during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006745"}


id: MONDO:0016527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease due to lactate dehydrogenase deficiency","secondary_identifiers":["icd11.foundation:1092207912","GARD:3159","MEDGEN:1805539","MESH:C580233","UMLS:C5575057","Orphanet:2364"],"synonyms":[{"name":"GSD due to lactate dehydrogenase deficiency","type":"exact"},{"name":"LDH deficiency","type":"exact"},{"name":"glycogenosis due to lactate dehydrogenase deficiency","type":"exact"},{"name":"lactate dehydrogenase deficiency","type":"related"}],"termid":"MONDO:0016527","xrefs":{"Monarch":{"xref_id":"0016527"}}}


id: MONDO:0017147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic pulmonary arterial hypertension (IPAH) is a sporadic form of pulmonary arterial hypertension (PAH) characterized by elevated pulmonary arterial resistance leading to right heart failure. IPAH is progressive and potentially fatal and not associated with an underlying condition or family history of PAH.","definition_xrefs":["Orphanet:275766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary arterial hypertension","termid":"MONDO:0015924"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic pulmonary arterial hypertension","secondary_identifiers":["GARD:21025","UMLS:C3203102","SCTID:697898008","ICD9:416.0","MedDRA:10065151","icd11.foundation:265520344","MEDGEN:468368","NANDO:2201046"],"synonyms":[{"name":"IPAH","type":"exact"},{"name":"primary pulmonary arterial hypertension","type":"exact"}],"termid":"MONDO:0017147","xrefs":{"Monarch":{"xref_id":"0017147"}}}


id: PBO:0047197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 215 member B","termid":"PBO:0047197"}


id: GO:0031341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell killing, the process in which a cell brings about the death of another cell, either in the same or a different organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell killing","termid":"GO:0001906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell killing","termid":"GO:0031341"}


id: PBO:0029238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitosis_with_unreplicated_DNA","termid":"PBO:0029238"}


id: MONDO:0018549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete late-onset scapuloperoneal muscular dystrophy with hyaline bodies (obsolete MONDO:0018549)","secondary_identifiers":["Orphanet:431263"],"synonyms":[{"name":"late-onset SPMD with hyaline bodies","type":"exact"},{"name":"late-onset scapuloperoneal syndrome, myopathic type","type":"exact"}],"termid":"MONDO:0018549","xrefs":{"Monarch":{"xref_id":"0018549"}}}


id: FYPO:0006965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of HMG-CoA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular HMG-CoA level","synonyms":[{"name":"increased HMG-CoA accumulation","type":"related"},{"name":"increased cellular 3-hydroxy-3-methylglutaryl-CoA level","type":"exact"},{"name":"increased cellular HMG-CoA level during mitotic cell cycle","type":"related"},{"name":"increased cellular HMG-CoA level during vegetative growth","type":"exact"},{"name":"increased cellular hydroxymethylglutaryl-CoA level","type":"exact"}],"termid":"FYPO:0006965"}


id: MONDO:0011687
data:
  {"annotated_genes":["SJAG_03815","SJAG_02919","SJAG_04567"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86863,86864,86865],"is_not":false,"summary":null,"term":"MONDO:0011687"}]},"cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2F (CMT2F) is a form of axonal Charcot-Marie-Tooth disease, a peripheral sensorimotor neuropathy. CMT2F is characterized by symmetric weakness primarily occurring in the lower limbs (distal muscles in a majority of cases) and reaching the arms only after 5 to 10 years, occasional and predominantly distal sensory loss and reduced tendon reflexes. CMT2F presents with gait anomaly between the 1st and 6th decade and early onset is generally associated to a more severe phenotype which may include foot drop.","definition_xrefs":["Orphanet:99940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2F","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:606595","DOID:0110163","MESH:C535413","GARD:9194","SCTID:719510006","MEDGEN:335784","UMLS:C1847823"],"synonyms":[{"name":"CMT 2F","type":"related"},{"name":"CMT2F","type":"exact"},{"name":"Charcot Marie Tooth disease type 2F","type":"related"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in HSPB1","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2F","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2F","type":"related"},{"name":"Charcot-Marie-Tooth disease, neuronal, type 2F","type":"related"},{"name":"Charcot-Marie-Tooth neuronal type 2F","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2F","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2F","type":"related"},{"name":"HSPB1 Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2F","type":"exact"}],"termid":"MONDO:0011687","terms_by_termid":{"MONDO:0011687":null},"xrefs":{"Monarch":{"xref_id":"0011687"}}}


id: GO:0051540
data:
  {"annotated_genes":["SJAG_00217","SJAG_04397","SJAG_00153","SJAG_02474","SJAG_03658","SJAG_00792","SJAG_00260","SJAG_03588","SJAG_04265","SJAG_02497","SJAG_02495","SJAG_00455","SJAG_03862","SJAG_02261","SJAG_02895","SJAG_02016","SJAG_05280","SJAG_00244","SJAG_01935","SJAG_04756","SJAG_03724","SJAG_04736","SJAG_04639","SJAG_03322","SJAG_01841","SJAG_03701","SJAG_02627","SJAG_05027","SJAG_01058","SJAG_01644","SJAG_02994","SJAG_04098","SJAG_00601","SJAG_04016","SJAG_04085","SJAG_04054","SJAG_00822","SJAG_03222","SJAG_03553","SJAG_02818","SJAG_04183","SJAG_02908","SJAG_01417","SJAG_01630","SJAG_00995","SJAG_01574","SJAG_03243","SJAG_00186","SJAG_00532"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87853,79205,68948,74106,71241,100290,67025,116428,69112,71328,65458,63887,77803,79644,93857,114535,114845,66172,58593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051537"},{"annotations":[66174,59566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051538"},{"annotations":[61468,63321,68725,73434,63070,67799,62050,64110,95936,79645,68988,63913,63207,67432,60134,63094,57426,68391,97874,68324,66175,72952,59030,105053,69696,66313,66305,69106,59220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051539"},{"annotations":[103196,68569,67591,59538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051536"}]},"cv_name":"molecular_function","definition":"Binding to a cluster of atoms including both metal ions and nonmetal atoms, usually sulfur and oxygen. Examples include iron-sulfur clusters and nickel-iron-sulfur clusters.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00186":null,"SJAG_00217":null,"SJAG_00244":null,"SJAG_00260":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00601":null,"SJAG_00792":null,"SJAG_00822":null,"SJAG_00995":null,"SJAG_01058":null,"SJAG_01417":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01644":null,"SJAG_01841":null,"SJAG_01935":null,"SJAG_02016":null,"SJAG_02261":null,"SJAG_02474":null,"SJAG_02495":null,"SJAG_02497":null,"SJAG_02627":null,"SJAG_02818":null,"SJAG_02895":null,"SJAG_02908":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03243":null,"SJAG_03322":null,"SJAG_03553":null,"SJAG_03588":null,"SJAG_03658":null,"SJAG_03701":null,"SJAG_03724":null,"SJAG_03862":null,"SJAG_04016":null,"SJAG_04054":null,"SJAG_04085":null,"SJAG_04098":null,"SJAG_04183":null,"SJAG_04265":null,"SJAG_04397":null,"SJAG_04639":null,"SJAG_04736":null,"SJAG_04756":null,"SJAG_05027":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"metal cluster binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0051540","terms_by_termid":{"GO:0051536":null,"GO:0051537":null,"GO:0051538":null,"GO:0051539":null}}


id: PBO:0070645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 16","termid":"PBO:0070645"}


id: MONDO:0015111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastroesophageal disease (obsolete MONDO:0015111)","secondary_identifiers":["Orphanet:101936"],"termid":"MONDO:0015111","xrefs":{"Monarch":{"xref_id":"0015111"}}}


id: PBO:0050923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3P pseudogene 6","termid":"PBO:0050923"}


id: MONDO:0002629
data:
  {"annotated_genes":["SJAG_04287"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85964],"is_not":false,"summary":null,"term":"MONDO:0002629"}]},"cv_name":"mondo","definition":"A usually aggressive malignant bone-forming mesenchymal neoplasm arising from the bone. It may arise de novo or from a pre-existing lesion of the bone. Pain and a palpable mass are the most frequent clinical sign and symptom. It may spread to other anatomic sites, particularly the lungs.","definition_xrefs":["NCIT:C53707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteosarcoma","termid":"MONDO:0009807"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone osteosarcoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:108437","SCTID:307576001","OMIM:259500","DOID:3376","ICD9:170.9","MedDRA:10031291","UMLS:C0585442","Orphanet:668","GARD:7284"],"synonyms":[{"name":"bone osteosarcoma","type":"exact"},{"name":"osteosarcoma of bone","type":"exact"},{"name":"osteosarcoma, somatic","type":"exact"},{"name":"osteosarcoma, somatic mutation","type":"exact"},{"name":"primary osteosarcoma of bone","type":"exact"}],"termid":"MONDO:0002629","terms_by_termid":{"MONDO:0002629":null},"xrefs":{"Monarch":{"xref_id":"0002629"}}}


id: GO:2001043
data:
  {"annotated_genes":["SJAG_01774","SJAG_02645"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89519,107750],"is_not":false,"summary":null,"term":"GO:2001043"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of septum digestion after cytokinesis","termid":"GO:0010590"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01774":null,"SJAG_02645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of septum digestion after cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of cell separation after cytokinesis","type":"related"},{"name":"positive regulation of cytokinetic cell separation","type":"related"}],"termid":"GO:2001043","terms_by_termid":{"GO:2001043":null}}


id: GO:0033296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the D- or L-enantiomer of rhamnose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"rhamnose binding","termid":"GO:0033296"}


id: PR:G2TRR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP8B7.32 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.32","synonyms":[{"name":"Spom972h-SPBP8B7.32","type":"exact"}],"termid":"PR:G2TRR5"}


id: PR:Q92383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mag1 gene.","definition_xrefs":["UniProtKB:Q92383","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.04c","synonyms":[{"name":"3-methyladenine DNA glycosidase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"3MEA DNA glycosylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mag1","type":"exact"}],"termid":"PR:Q92383"}


id: PBO:0027824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_protein_localization_to_mitotic_spindle","termid":"PBO:0027824"}


id: MONDO:0859309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 88, autosomal dominant","secondary_identifiers":["UMLS:C5774247","MEDGEN:1824020","DOID:0070457","OMIM:620106"],"termid":"MONDO:0859309","xrefs":{"Monarch":{"xref_id":"0859309"}}}


id: GO:0021622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the oculomotor nerve is generated and organized. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:dph","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"oculomotor nerve development","termid":"GO:0021557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve morphogenesis","synonyms":[{"name":"CN III morphogenesis","type":"related"}],"termid":"GO:0021622"}


id: PBO:0075017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-28","termid":"PBO:0075017"}


id: MONDO:0018265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder with dystonia and other neurologic or systemic manifestation (obsolete MONDO:0018265)","secondary_identifiers":["Orphanet:370106"],"termid":"MONDO:0018265","xrefs":{"Monarch":{"xref_id":"0018265"}}}


id: PBO:0116989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAL3ST2 antisense RNA 1","termid":"PBO:0116989"}


id: PBO:0081252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 23","termid":"PBO:0081252"}


id: GO:0008732
data:
  {"annotated_genes":["SJAG_02450"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71800],"is_not":false,"summary":null,"term":"GO:0008732"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-allo-threonine = glycine + acetaldehyde.","definition_xrefs":["PMID:9228760","RHEA:26209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"threonine aldolase activity","termid":"GO:0004793"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02450":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-allo-threonine aldolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:LTAA-RXN","EC:4.1.2.49"],"synonyms":[{"name":"L-allo-threonine acetaldehyde-lyase activity","type":"exact"},{"name":"LtaA","type":"related"}],"termid":"GO:0008732","terms_by_termid":{"GO:0008732":null}}


id: MONDO:0022500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by congenital contractures, scarce facial expressions, central nervous system dysfunction, and early death, as well as extensive deposits of calcium compounds in the nervous system and of skeletal muscle.","definition_xrefs":["PMID:3205375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita CNS calcification","termid":"MONDO:0022500","xrefs":{"Monarch":{"xref_id":"0022500"}}}


id: SO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from nuclear sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"nuclear_sequence","termid":"SO:0000738"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear_gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Nuclear_gene"],"synonyms":[{"name":"nuclear gene","type":"exact"}],"termid":"SO:0000087"}


id: PBO:0083342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene ATG16/YMR159C","termid":"PBO:0083342"}


id: PBO:0070115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 29 pseudogene","termid":"PBO:0070115"}


id: PBO:0046015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF2AK1 pseudogene 1","termid":"PBO:0046015"}


id: PBO:0051269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa deleting element or like","termid":"PBO:0051269"}


id: MONDO:0019447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atypical lichen myxedematosus is an intermediate form of lichen myxedematosus (LM) (a form of mucin dermal deposit) which does not meet the criteria for either scleromyxedema or the localized form. Three clinical subtypes have been described and include scleromyxedema without monoclonal gammopathy; localized forms with monoclonal gammopathy and/or systemic symptoms; localized forms with mixed features of the 5 subtypes of localized LM (discrete form, acral persistent papular mucinosis, self-healing papular mucinosis, papular mucinosis of infancy, and a pure nodular form). The course of atypical LM is unpredictable because only a few cases have been reported.","definition_xrefs":["Orphanet:86797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen myxedematosus","termid":"MONDO:0018432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"atypical lichen myxedematosus","secondary_identifiers":["SCTID:725148000","UMLS:C4510874","GARD:19066","MEDGEN:1383234"],"synonyms":[{"name":"Intermediate lichen myxedematosus","type":"exact"}],"termid":"MONDO:0019447","xrefs":{"Monarch":{"xref_id":"0019447"}}}


id: GO:0090079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any selective and non-covalent interaction with a nucleic acid involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome.","definition_xrefs":["GOC:tb","GOC:vw","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete translation regulator activity, nucleic acid binding (obsolete GO:0090079)","termid":"GO:0090079"}


id: PBO:0062927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y14","termid":"PBO:0062927"}


id: PR:P0CT34
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-1 gene.","definition_xrefs":["UniProtKB:P0CT34","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-1 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.04","synonyms":[{"name":"Spom972h-Tf2-1","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT34"}


id: GO:0032399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a HECT, 'Homologous to the E6-AP Carboxy-Terminus', domain of a protein.","definition_xrefs":["Pfam:PF00632","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"HECT domain binding","termid":"GO:0032399"}


id: PBO:0084585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCR058C was originally annotated as an independent ORF, but as a result of sequence changes, it was merged with two other ORFs into a single reading frame, designated YCR057C","termid":"PBO:0084585"}


id: MONDO:0008186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancytopenia and occlusive vascular disease","secondary_identifiers":["MEDGEN:358375","MESH:C566836","UMLS:C1868652","OMIM:167850"],"synonyms":[{"name":"pancytopenia and occlusive vascular disease","type":"exact"}],"termid":"MONDO:0008186","xrefs":{"Monarch":{"xref_id":"0008186"}}}


id: GO:0019548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including spermine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine catabolic process","termid":"GO:0006527"},{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"arginine catabolic process to spermine","secondary_identifiers":["MetaCyc:ARGSPECAT-PWY"],"synonyms":[{"name":"arginine breakdown to spermine","type":"exact"},{"name":"arginine degradation to spermine","type":"exact"}],"termid":"GO:0019548"}


id: PBO:0071714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 12","termid":"PBO:0071714"}


id: FYPO:0005995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature long non-coding RNA (lncRNA) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased lncRNA level","synonyms":[{"name":"increased lncRNA accumulation","type":"related"},{"name":"increased lncRNA level during mitotic cell cycle","type":"related"},{"name":"increased lncRNA level during vegetative growth","type":"exact"},{"name":"increased lncRNA transcript level","type":"broad"},{"name":"increased long non-coding RNA level","type":"exact"},{"name":"increased mature lncRNA level","type":"exact"}],"termid":"FYPO:0005995"}


id: GO:0090238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of arachidonic acid secretion, the controlled release of arachidonic acid from a cell or a tissue.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of icosanoid secretion","termid":"GO:0032305"},{"relation_name":"is_a","term_name":"regulation of arachidonate secretion","termid":"GO:0090237"},{"relation_name":"positively_regulates","term_name":"arachidonate secretion","termid":"GO:0050482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of arachidonate secretion","synonyms":[{"name":"positive regulation of arachidonic acid secretion","type":"exact"}],"termid":"GO:0090238"}


id: GO:0071328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a maltose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to maltose","termid":"GO:0034286"},{"relation_name":"is_a","term_name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to maltose stimulus","termid":"GO:0071328"}


id: PR:Q10072
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H1.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C3H1.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.06c","synonyms":[{"name":"Spom972h-SPAC3H1.06c","type":"exact"}],"termid":"PR:Q10072"}


id: FYPO:0004000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-cysteine ligase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutamate-cysteine ligase activity","termid":"FYPO:0002853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased glutamate-cysteine ligase activity","termid":"FYPO:0004000"}


id: GO:0071199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP10 associated with the channel via interaction with the Kv alpha subunit 4.1.","definition_xrefs":["PMID:15911355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Kv4.1-DPP10 channel complex","secondary_identifiers":["CORUM:601"],"synonyms":[{"name":"Kv4.1-DPPY channel complex","type":"exact"}],"termid":"GO:0071199"}


id: GO:0099577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission by regulating translation occurring at the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"},{"relation_name":"is_a","term_name":"regulation of translation at synapse, modulating synaptic transmission","termid":"GO:0099547"},{"relation_name":"is_a","term_name":"regulation of translation at presynapse","termid":"GO:0140244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation at presynapse, modulating synaptic transmission","termid":"GO:0099577"}


id: GO:0070974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a POU domain of a protein. The POU domain is a bipartite DNA binding domain composed of two subunits separated by a non-conserved region of 15-55 amino acids; it is found in several eukaryotic transcription factors.","definition_xrefs":["GOC:yaf","InterPro:IPR000327","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"POU domain binding","termid":"GO:0070974"}


id: PBO:0047414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 5","termid":"PBO:0047414"}


id: MONDO:0011409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Schistosoma mansoni infection, susceptibility/resistance to","termid":"MONDO:0859050"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic fibrosis, severe, susceptibility to, due to Schistosoma mansoni infection","secondary_identifiers":["MEDGEN:349002","OMIM:604201","UMLS:C1858709"],"synonyms":[{"name":"Sm2","type":"related"},{"name":"hepatic fibrosis susceptibility due to schistosoma mansoni infection","type":"exact"},{"name":"hepatic fibrosis, Severe, susceptibility to, due to Schistosoma japonicum infection","type":"related"},{"name":"hepatic fibrosis, severe, susceptibility to, due to Schistosoma mansoni infection","type":"exact"}],"termid":"MONDO:0011409","xrefs":{"Monarch":{"xref_id":"0011409"}}}


id: GO:0097065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior part of the head over time, from its formation to the mature structure.","definition_xrefs":["PMID:14695376","PMID:15857913","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head development","termid":"GO:0060322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior head development","termid":"GO:0097065"}


id: GO:0008659
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-3-hydroxytetradecanoyl-[acyl-carrier protein] = tetradecenoyl-[acyl-carrier protein] + H2O.","definition_xrefs":["GOC:ai","PMID:12368867"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity (obsolete GO:0008659)","synonyms":[{"name":"(3R)-hydroxymyristoyl-ACP dehydratase activity","type":"exact"},{"name":"(3R)-hydroxymyristoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"}],"termid":"GO:0008659"}


id: PR:P79015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3202 gene.","definition_xrefs":["UniProtKB:P79015","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.10","synonyms":[{"name":"Spom972h-rpl3202","type":"exact"}],"termid":"PR:P79015"}


id: PR:O13947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial tRNA-specific 2-thiouridylase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11933:SF0","PRO:DNx","OMA:SCHPO00647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA-specific 2-thiouridylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.04","secondary_identifiers":["UniProtKB:O13947"],"synonyms":[{"name":"Spom972h-TRMU","type":"exact"}],"termid":"PR:O13947"}


id: MONDO:0015539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive nodular histiocytosis is a rare, normolipemic, non-Langerhans cell histiocytosis characterized by progressive growth of multiple to disseminated, asymptomatic skin lesions that range in appearance from yellow plaques to coalescence-prone red-brown papules, nodules and pedunculated tumors up to 5 cm in size, located typically on the face, trunk and extremities (and rarely on conjuctiva and mucous membranes). Characteristic microscopic findings include a storiform spindle cell infiltrate in the deep dermis with xanthomatized macrophages and some Touton cells in the upper dermis. It is usually not associated with systemic disease.","definition_xrefs":["Orphanet:158022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"progressive nodular histiocytosis","secondary_identifiers":["MEDGEN:1647278","UMLS:C4707331","SCTID:765141005","GARD:20023","icd11.foundation:1576286064"],"termid":"MONDO:0015539","xrefs":{"Monarch":{"xref_id":"0015539"}}}


id: PBO:0111426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo6","termid":"PBO:0111426"}


id: GO:0070641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D4, (3S,5Z,7E)-9,10-secoergosta-5,7,10(19)-trien-3-ol.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D metabolic process","termid":"GO:0042359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"vitamin D4 metabolic process","synonyms":[{"name":"vitamin D4 metabolism","type":"exact"}],"termid":"GO:0070641"}


id: PBO:0051413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-51","termid":"PBO:0051413"}


id: PBO:0113357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for sporulation; induced during meiosis and sporulation; gene is a member of Centroid, a centromere-linked gene family; not an essential gene; YNL034W has a paralog, YNL018C, that arose from a segmental duplication","termid":"PBO:0113357"}


id: PBO:0073503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2B adaptor protein 2","termid":"PBO:0073503"}


id: MONDO:0001879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the anus","direct_ancestors":[{"relation_name":"is_a","term_name":"anus neoplasm","termid":"MONDO:0003046"},{"relation_name":"is_a","term_name":"rectal cancer","termid":"MONDO:0006519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anus cancer","secondary_identifiers":["DOID:14110","ICD9:154.2","MEDGEN:56303","ICD9:154.3","NCIT:C7379","SCTID:363352004","UMLS:C0153446"],"synonyms":[{"name":"anus cancer","type":"exact"},{"name":"cancer of anus","type":"exact"},{"name":"malignant anal neoplasm","type":"exact"},{"name":"malignant anal tumor","type":"exact"},{"name":"malignant anal tumour","type":"exact"},{"name":"malignant anus neoplasm","type":"exact"},{"name":"malignant neoplasm of anus","type":"exact"},{"name":"malignant neoplasm of the anus","type":"exact"},{"name":"malignant tumor of anus","type":"exact"},{"name":"malignant tumor of the anus","type":"exact"},{"name":"malignant tumour of anus","type":"exact"},{"name":"malignant tumour of the anus","type":"exact"}],"termid":"MONDO:0001879","xrefs":{"Monarch":{"xref_id":"0001879"}}}


id: GO:0061967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial formation of the type asymmetry in an organism's body plan or part of an organism that established the pattern characteristic to its left side.","definition_xrefs":["GOC:18629866","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of left/right asymmetry","termid":"GO:0061966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of left sidedness","termid":"GO:0061967"}


id: PBO:0040782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bet1 golgi vesicular membrane trafficking protein pseudogene 1","termid":"PBO:0040782"}


id: PBO:0047411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 2","termid":"PBO:0047411"}


id: SO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variable gene that rearranges at the DNA level and codes the variable region of the variable domain of an Immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_V_gene","synonyms":[{"name":"IGV_gene","type":"exact"},{"name":"IG_variable_gene","type":"exact"},{"name":"Immunoglobulin_variable_gene","type":"exact"}],"termid":"SO:0002126"}


id: PBO:0066788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 87","termid":"PBO:0066788"}


id: PBO:0071502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 5","termid":"PBO:0071502"}


id: GO:0007154
data:
  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id: PBO:0083772
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id: PR:Q10262
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id: GO:0048279
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id: MONDO:0014515
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id: PBO:0069385
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id: PBO:0007498
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id: GO:0016937
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id: PBO:0039423
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id: PBO:0080500
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id: GO:0070404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the reduced form, NADH, of nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"NAD binding","termid":"GO:0051287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"NADH binding","synonyms":[{"name":"NAD (reduced) binding","type":"exact"},{"name":"reduced NAD binding","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide binding","type":"exact"}],"termid":"GO:0070404"}


id: MONDO:0009760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly syndrome, Norman-Roberts type is characterized by the association of lissencephaly type I with craniofacial anomalies (severe microcephaly, a low sloping forehead, a broad and prominent nasal bridge and widely set eyes) and postnatal growth retardation.","definition_xrefs":["Orphanet:89844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"microlissencephaly","termid":"MONDO:0015204"},{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002320"],"is_obsolete":false,"name":"Norman-Roberts syndrome","secondary_identifiers":["DOID:0060902","MEDGEN:163213","OMIM:257320","SCTID:717977003","GARD:16780","UMLS:C0796089"],"synonyms":[{"name":"LIS2","type":"related"},{"name":"Microlissencephaly type A","type":"exact"},{"name":"Norman Roberts lissencephaly syndrome","type":"related"},{"name":"Norman-Roberts syndrome","type":"exact"},{"name":"lissencephaly 2","type":"exact"},{"name":"lissencephaly 2 (Norman-Roberts type)","type":"exact"},{"name":"lissencephaly syndrome Norman-Roberts type","type":"related"},{"name":"lissencephaly syndrome, Norman-Roberts type","type":"exact"}],"termid":"MONDO:0009760","xrefs":{"Monarch":{"xref_id":"0009760"}}}


id: FYPO:0005656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which iron ion binding by a gene product does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished iron ion binding","synonyms":[{"name":"abolished iron binding","type":"exact"},{"name":"iron ion binding abolished","type":"exact"}],"termid":"FYPO:0005656"}


id: PBO:0029798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short,_thick,_misoriented_actin_cables","termid":"PBO:0029798"}


id: GO:0043882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: malate(out) + Na+(out) = malate(in) + Na+(in).","definition_xrefs":["GOC:jl","PMID:10903309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transmembrane transporter activity","termid":"GO:0015140"},{"relation_name":"is_a","term_name":"sodium:dicarboxylate symporter activity","termid":"GO:0017153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"malate:sodium symporter activity","secondary_identifiers":["RHEA:72295"],"synonyms":[{"name":"Na(+)-malate symporter activity","type":"exact"},{"name":"Na+:malate symporter activity","type":"exact"},{"name":"malate Na(+) symporter activity","type":"exact"},{"name":"malate-sodium symporter activity","type":"exact"},{"name":"malate/sodium cotransporter activity","type":"broad"},{"name":"malate/sodium symporter activity","type":"exact"},{"name":"malate:Na+ symporter activity","type":"exact"},{"name":"malate:sodium cotransporter activity","type":"broad"},{"name":"sodium-dependent malate transporter","type":"broad"},{"name":"sodium/malate symporter activity","type":"exact"},{"name":"sodium:malate symporter activity","type":"exact"}],"termid":"GO:0043882"}


id: SO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"This attribute describes a gene where heritable changes other than those in the DNA sequence occur. These changes include: modification to the DNA (such as DNA methylation, the covalent modification of cytosine), and post-translational modification of histones.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epigenetically_modified","synonyms":[{"name":"epigenetically modified","type":"exact"}],"termid":"SO:0000133"}


id: PBO:0072820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 13","termid":"PBO:0072820"}


id: PBO:0042476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 3","termid":"PBO:0042476"}


id: GO:0015469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A toxin that exerts its effects by forming a channel in a membrane that allows the unregulated passage of substances into and out of the cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete channel-forming toxin activity (obsolete GO:0015469)","synonyms":[{"name":"channel-forming toxin activity","type":"exact"}],"termid":"GO:0015469"}


id: PBO:0074916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 87","termid":"PBO:0074916"}


id: PBO:0002957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mpv17/PMP22 family protein 1 (predicted)","termid":"PBO:0002957"}


id: GO:0070460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of thyroid-stimulating hormone, a peptide hormone that stimulates the activity of the thyroid gland, from secretory granules in the anterior pituitary.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"thyroid-stimulating hormone secretion","synonyms":[{"name":"TSH secretion","type":"exact"},{"name":"thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:0070460"}


id: PBO:0111951
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hir protein binding region","termid":"PBO:0111951"}


id: GO:0008355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"associative learning","termid":"GO:0008306"},{"relation_name":"is_a","term_name":"olfactory behavior","termid":"GO:0042048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory learning","termid":"GO:0008355"}


id: MONDO:0014176
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024567"}]},"cv_name":"mondo","definition":"A rare, genetic neurodegenerative disorder characterized by severe, persistent hypotonia (presenting at birth or in early infancy), severe global developmental delay (with poor or absent speech, difficulty or inability to roll, sit or walk), profound intellectual disability, and failure to thrive. Additional manifestations include microcephaly, progressive peripheral spasticity, bilateral strabismus and nystagmus, constipation, and variable dysmorphic facial features (including plagiocephaly, broad forehead, small nose, low-set ears, micrognathia and open mouth with tented upper lip).","definition_xrefs":["Orphanet:371364"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005559"],"is_obsolete":false,"name":"hypotonia, infantile, with psychomotor retardation and characteristic facies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4706556","OMIMPS:615419","MEDGEN:1642314","GARD:17609"],"synonyms":[{"name":"IHPRF","type":"exact"},{"name":"IHPRF syndrome","type":"exact"},{"name":"hypotonia, infantile, with psychomotor retardation and characteristic facies","type":"exact"},{"name":"hypotonia-speech impairment-severe cognitive delay syndrome","type":"exact"},{"name":"infantile hypotonia-psychomotor retardation-characteristic facies syndrome","type":"exact"}],"termid":"MONDO:0014176","terms_by_termid":{"MONDO:0024567":null},"xrefs":{"Monarch":{"xref_id":"0014176"}}}


id: PBO:0043262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 20","termid":"PBO:0043262"}


id: FYPO:0005313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which maintenance of mitotic sister chromatid cohesion is normal (i.e. indistinguishable from wild type). Maintenance of mitotic sister chromatid cohesion is the process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the mitotic spindle, and congress to the metaphase plate.","definition_xrefs":["GO:0034088","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal maintenance of mitotic sister chromatid cohesion","synonyms":[{"name":"normal maintenance of mitotic chromosome cohesion","type":"exact"},{"name":"normal maintenance of mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal maintenance of sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005313"}


id: PBO:0053764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1007","termid":"PBO:0053764"}


id: PATO:0000596
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased volume","synonyms":[{"name":"low volume","type":"exact"},{"name":"small volume","type":"related"}],"termid":"PATO:0000596"}


id: FYPO:0007185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested at the mitotic G2/M phase transition during a cellular response to hydroxyurea.","definition_xrefs":["PMID:28377506","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to hydroxyurea","termid":"FYPO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during cellular response to hydroxyurea","synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during cellular response to HU","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic G2 phase during cellular response to hydroxyurea","type":"related"},{"name":"abnormal mitotic cell cycle arrest at mitotic G2/M phase transition during cellular response to hydroxyurea","type":"exact"},{"name":"abolished mitotic G2/M phase transition during cellular response to hydroxyurea","type":"related"},{"name":"cell cycle arrest at mitotic G2/M phase transition during cellular response to hydroxyurea","type":"exact"},{"name":"mitotic G2 phase arrest during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0007185"}


id: MONDO:0001241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neutropenia","termid":"MONDO:0001475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"transient neonatal neutropenia","secondary_identifiers":["MEDGEN:510688","SCTID:55444004","DOID:11245","ICD10CM:P61.5","UMLS:C0158997","ICD9:776.7"],"termid":"MONDO:0001241","xrefs":{"Monarch":{"xref_id":"0001241"}}}


id: FYPO:0001031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites of single-strand breaks in DNA is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"accumulation of single-strand break sites","synonyms":[{"name":"accumulation of single-strand break sites during mitotic cell cycle","type":"related"},{"name":"accumulation of single-strand break sites during vegetative growth","type":"exact"},{"name":"increased number of single-strand break sites during vegetative growth","type":"exact"}],"termid":"FYPO:0001031"}


id: GO:0008073
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65509],"is_not":false,"summary":null,"term":"GO:0008073"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ornithine decarboxylase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ornithine decarboxylase regulator activity","termid":"GO:0042979"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0004857","GO:0140678","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"ornithine decarboxylase inhibitor activity","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0008073","terms_by_termid":{"GO:0008073":null}}


id: GO:0043217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of preserving the structure and function of mature myelin. This includes maintaining the compact structure of myelin necessary for its electrical insulating characteristics as well as the structure of non-compact regions such as Schmidt-Lantermann clefts and paranodal loops. This does not include processes responsible for maintaining the nodes of Ranvier, which are not part of the myelin sheath.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"myelin maintenance","synonyms":[{"name":"myelin sheath maintenance","type":"exact"}],"termid":"GO:0043217"}


id: GO:0035380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD(P)+ = 3-oxoacyl-CoA + NAD(P)H + H+, where the acyl group is a very long-chain fatty acid residue. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"very long-chain-3-hydroxyacyl-CoA dehydrogenase activity","synonyms":[{"name":"very-long-chain-3-hydroxyacyl-CoA dehydrogenase activity","type":"exact"}],"termid":"GO:0035380"}


id: MONDO:0012615
data:
  {"annotated_genes":["SJAG_03333"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86882],"is_not":false,"summary":null,"term":"MONDO:0012615"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the TUSC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03333":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081183","MEDGEN:370847","MESH:C567016","UMLS:C1970197","GARD:22543","OMIM:611093"],"synonyms":[{"name":"MRT7","type":"related"},{"name":"TUSC3 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in TUSC3","type":"exact"},{"name":"intellectual disability, autosomal recessive 22","type":"related"},{"name":"intellectual disability, autosomal recessive 7","type":"exact"},{"name":"intellectual disability, autosomal recessive type 7","type":"exact"},{"name":"mental retardation, autosomal recessive 22","type":"related"},{"name":"mental retardation, autosomal recessive 7","type":"related"},{"name":"mental retardation, autosomal recessive type 7","type":"exact"}],"termid":"MONDO:0012615","terms_by_termid":{"MONDO:0012615":null},"xrefs":{"Monarch":{"xref_id":"0012615"}}}


id: MONDO:0027749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpinopathy","secondary_identifiers":["Orphanet:250805","UMLS:C5680704","GARD:20683","MEDGEN:1842372"],"termid":"MONDO:0027749","xrefs":{"Monarch":{"xref_id":"0027749"}}}


id: MONDO:0003115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the subglottic area.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of subglottis","termid":"MONDO:0021530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subglottic hemangioma","secondary_identifiers":["MEDGEN:234907","UMLS:C1336518","DOID:472","NCIT:C6026"],"synonyms":[{"name":"angioma of subglottis","type":"exact"},{"name":"angioma of the subglottis","type":"exact"},{"name":"hemangioma of subglottis","type":"exact"},{"name":"hemangioma of the subglottis","type":"exact"},{"name":"subglottic angioma","type":"exact"},{"name":"subglottic hemangioma","type":"exact"},{"name":"subglottis angioma","type":"exact"},{"name":"subglottis hemangioma","type":"exact"}],"termid":"MONDO:0003115","xrefs":{"Monarch":{"xref_id":"0003115"}}}


id: GO:1905828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of prostaglandin catabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:12432938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"prostaglandin catabolic process","termid":"GO:1905344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of prostaglandin catabolic process","synonyms":[{"name":"regulation of prostaglandin breakdown","type":"exact"},{"name":"regulation of prostaglandin catabolism","type":"exact"},{"name":"regulation of prostaglandin degradation","type":"exact"}],"termid":"GO:1905828"}


id: PBO:0038470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 9","termid":"PBO:0038470"}


id: GO:0019930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-aspartic acid to form peptidyl-cis-14-hydroxy-10,13-dioxo-7-heptadecenoic acid aspartate ester, typical of the barley lipid transfer protein 1.","definition_xrefs":["RESID:AA0316"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-14-hydroxy-10,13-dioxo-7-heptadecenoic acid peptidyl-aspartate ester biosynthetic process from peptidyl-aspartic acid (obsolete GO:0019930)","synonyms":[{"name":"cis-14-hydroxy-10,13-dioxo-7-heptadecenoic acid peptidyl-aspartate ester anabolism from peptidyl-aspartic acid","type":"exact"},{"name":"cis-14-hydroxy-10,13-dioxo-7-heptadecenoic acid peptidyl-aspartate ester formation from peptidyl-aspartic acid","type":"exact"},{"name":"cis-14-hydroxy-10,13-dioxo-7-heptadecenoic acid peptidyl-aspartate ester synthesis from peptidyl-aspartic acid","type":"exact"}],"termid":"GO:0019930"}


id: MONDO:0008521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tarsal-carpal coalition syndrome is characterized by fusion of the carpals, tarsals, and phalanges.","definition_xrefs":["Orphanet:1412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"NOG-related symphalangism spectrum disorder","termid":"MONDO:0100521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"tarsal-carpal coalition syndrome","secondary_identifiers":["DOID:0050789","GARD:9225","icd11.foundation:1118132902","ICD9:756.9","OMIM:186570","SCTID:702312009","MEDGEN:348322","UMLS:C1861305"],"synonyms":[{"name":"TCC","type":"related"},{"name":"synostosis of talus and calcaneus with short stature","type":"related"},{"name":"tarsal carpal coalition syndrome","type":"related"},{"name":"tarsal-carpal coalition syndrome","type":"exact"}],"termid":"MONDO:0008521","xrefs":{"Monarch":{"xref_id":"0008521"}}}


id: MONDO:0015151
data:
  {"annotated_genes":["SJAG_04228","SJAG_03470"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0021018"},{"annotations":[85589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012034"}]},"cv_name":"mondo","definition":"Autosomal dominant form of limb-girdle muscular dystrophy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"limb-girdle muscular dystrophy","termid":"MONDO:0016971"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03470":null,"SJAG_04228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"muscular dystrophy, limb-girdle, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:537908479","Orphanet:102014","UMLS:C5675009","OMIMPS:603511","GARD:19824","MEDGEN:1826162","DOID:0110273"],"synonyms":[{"name":"autosomal dominant limb-girdle muscular dystrophy","type":"exact"},{"name":"limb-girdle muscular dystrophy, autosomal dominant","type":"exact"},{"name":"muscular dystrophy, limb-girdle, autosomal dominant","type":"exact"}],"termid":"MONDO:0015151","terms_by_termid":{"MONDO:0012034":null,"MONDO:0021018":null},"xrefs":{"Monarch":{"xref_id":"0015151"}}}


id: PBO:0040565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 1","termid":"PBO:0040565"}


id: PBO:0086188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to bacterial secreted DfsB proteins; null mutant displays increased levels of spontaneous Rad52p foci; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0086188"}


id: MONDO:1012598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in rabbits due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, rabbit","secondary_identifiers":["OMIA:000202-9986"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Oryctolagus cuniculus (rabbit)","type":"exact"}],"termid":"MONDO:1012598","xrefs":{"Monarch":{"xref_id":"1012598"}}}


id: FYPO:0000895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal with a cluster distal to one or both sides of the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"},{"relation_name":"is_a","term_name":"abnormal intracellular mitochondrion distribution","termid":"FYPO:0000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"mitochondrial aggregation","secondary_identifiers":["FYPO:0000896"],"synonyms":[{"name":"aggregated mitochondria","type":"exact"},{"name":"mitochondrial aggregation at cell end","type":"related"},{"name":"mitochondrial aggregation at cell tip","type":"related"},{"name":"mitochondrial aggregation during mitotic cell cycle","type":"related"},{"name":"mitochondrial aggregation during vegetative growth","type":"exact"}],"termid":"FYPO:0000895"}


id: PBO:0052848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-4","termid":"PBO:0052848"}


id: GO:2001100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a pentasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pentasaccharide transport","termid":"GO:2001100"}


id: MONDO:0007125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental abnormality in which the bottom of the tongue is attached to the floor of the mouth.","definition_xrefs":["NCIT:C124538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyloglossia","secondary_identifiers":["DOID:0060604","UMLS:C0152415","MESH:D000072676","MESH:C562396","MEDGEN:56288","ICD9:750.0","OMIM:106280","icd11.foundation:1838543063","ICD10CM:Q38.1","SCTID:67787004"],"synonyms":[{"name":"'tongue-Tie'","type":"related"},{"name":"FUSED to floor of mouth","type":"exact"},{"name":"ankyloglossia","type":"exact"},{"name":"tongue-tie","type":"exact"}],"termid":"MONDO:0007125","xrefs":{"Monarch":{"xref_id":"0007125"}}}


id: PBO:0078253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 28","termid":"PBO:0078253"}


id: GO:1990179
data:
  {"annotated_genes":["SJAG_04703","SJAG_00279","SJAG_02831"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118436,92123,110594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the actomyosin contractile ring.","definition_xrefs":["PMID:23349808","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"is_a","term_name":"protein localization to actin cytoskeleton","termid":"GO:1903119"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_02831":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actomyosin contractile ring","type":"exact"}],"termid":"GO:1990179","terms_by_termid":{"GO:1904498":null}}


id: MONDO:0023020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism deafness retinitis pigmentosa","termid":"MONDO:0023020","xrefs":{"Monarch":{"xref_id":"0023020"}}}


id: FYPO:0000852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to a salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to osmotic stress","termid":"FYPO:0000851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to salt stress","synonyms":[{"name":"increased growth during cellular response to salt stress","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to salt stress","type":"exact"},{"name":"ionic stress resistance: increased","type":"related"},{"name":"resistance to salt stress during mitotic cell cycle","type":"related"},{"name":"resistant to salt stress","type":"exact"},{"name":"resistant to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000852"}


id: GO:0036495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation initiation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"},{"relation_name":"is_a","term_name":"negative regulation of translation in response to endoplasmic reticulum stress","termid":"GO:1902010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation initiation in response to endoplasmic reticulum stress","synonyms":[{"name":"negative regulation of translation initiation in response to ER stress","type":"related"}],"termid":"GO:0036495"}


id: PBO:0089394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Fnx2","termid":"PBO:0089394"}


id: FYPO:0000878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere inner repeat during vegetative growth","termid":"FYPO:0000868"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000877"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation at centromere inner repeat during vegetative growth","termid":"FYPO:0008200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 dimethylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"v histone lysine H3 K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000878"}


id: FYPO:0004769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular asparagine level","termid":"FYPO:0006953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased vacuolar asparagine level","synonyms":[{"name":"increased level of asparagine in vacuole","type":"exact"},{"name":"increased vacuolar L-asparagine level","type":"exact"},{"name":"increased vacuolar asparagine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004769"}


id: GO:0045739
data:
  {"annotated_genes":["SJAG_02104","SJAG_03695","SJAG_03160","SJAG_04457","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111829,117072],"is_not":false,"summary":null,"term":"GO:0045739"},{"annotations":[93680,109978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000781"},{"annotations":[107202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA repair.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"positively_regulates","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00823":null,"SJAG_02104":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA repair","type":"narrow"},{"name":"stimulation of DNA repair","type":"narrow"},{"name":"up regulation of DNA repair","type":"exact"},{"name":"up-regulation of DNA repair","type":"exact"},{"name":"upregulation of DNA repair","type":"exact"}],"termid":"GO:0045739","terms_by_termid":{"GO:0045739":null,"GO:2000781":null,"GO:2001034":null}}


id: PBO:0082516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the NatC type N-terminal acetyltransferase (NAT); involved in subcellular targeting of select N-terminally acetylated substrates to the Golgi apparatus (Arl3p and Grh1p) and the inner nuclear membrane (Trm1p); required for replication of dsRNA virus; human NatC ortholog, NAA30, functionally complements the null, requiring either auxiliary subunit Mak10p or co-expression of human ortholog, NAA35; NAA60, the human NatF gene, also complements the null allele","termid":"PBO:0082516"}


id: PBO:0073469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFXN4 pseudogene 1","termid":"PBO:0073469"}


id: PBO:0081512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 418","termid":"PBO:0081512"}


id: PBO:0039417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angel homolog 2","termid":"PBO:0039417"}


id: PR:Q9P3V5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.05 gene.","definition_xrefs":["UniProtKB:Q9P3V5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1348.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.05","synonyms":[{"name":"Spom972h-SPBC1348.05","type":"exact"}],"termid":"PR:Q9P3V5"}


id: GO:0072271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric short descending thin limb over time, from its formation to the mature structure. The metanephric short descending thin limb is the descending thin limb of a short nephron in the metanephros that has a squamous epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short descending thin limb development","termid":"GO:0072063"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric short nephron development","termid":"GO:0072270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric short descending thin limb development","termid":"GO:0072271"}


id: PBO:0090166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp6","termid":"PBO:0090166"}


id: FYPO:0000627
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118954,118953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[118946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"},{"annotations":[119341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[119084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"},{"annotations":[119121,119118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000579"},{"annotations":[119117,119120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"},{"annotations":[118944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000596"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific cellular process is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype","termid":"FYPO:0000114"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01143":null,"SJAG_01355":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null,"SJAG_04883":null},"genotype_count":7,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild 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process","references_by_uniquename":{"PMID:25866389":null,"PMID:35226668":null,"PMID:36695178":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01355","SJAG_03689","SJAG_00601","SJAG_01143","SJAG_04883"],"single_locus_genotype_uniquenames":["rip1delta","dcr1delta","ptp4delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","cox6delta"],"termid":"FYPO:0000627","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000579":null,"FYPO:0000590":null,"FYPO:0000596":null,"FYPO:0000644":null,"FYPO:0001007":null,"FYPO:0006989":null,"FYPO_EXT:0000001":null}}


id: MONDO:0001023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature B- or T- cell leukemia with progressive clinical course. It is characterized by the presence of medium-sized lymphocytes with visible nucleoli (prolymphocytes) in the peripheral blood, bone marrow, and spleen.","definition_xrefs":["NCIT:C3181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic leukemia","termid":"MONDO:0001014"},{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"prolymphocytic leukemia","secondary_identifiers":["ICDO:9832/3","SCTID:110006004","MESH:D015463","UMLS:C0023486","MEDGEN:6062","DOID:1039","GARD:11965","ICD9:204.80"],"synonyms":[{"name":"PLL","type":"exact"},{"name":"prolymphocytic leukaemia (B or T)","type":"exact"},{"name":"prolymphocytic leukaemia (B or T-cell)","type":"exact"},{"name":"prolymphocytic leukemia","type":"exact"},{"name":"prolymphocytic leukemia (B or T)","type":"exact"},{"name":"prolymphocytic leukemia (B or T-cell)","type":"exact"}],"termid":"MONDO:0001023","xrefs":{"Monarch":{"xref_id":"0001023"}}}


id: PBO:0042202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin G2","termid":"PBO:0042202"}


id: PBO:0041161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 16","termid":"PBO:0041161"}


id: MONDO:0014134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary pulmonary hypertension in which the cause of the disease is a mutation in the SMAD9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heritable pulmonary arterial hypertension","termid":"MONDO:0017148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary hypertension, primary, 2","secondary_identifiers":["GARD:18394","UMLS:C3888002","MEDGEN:854709","OMIM:615342"],"synonyms":[{"name":"PPH2","type":"related"},{"name":"SMAD9 primary pulmonary hypertension","type":"exact"},{"name":"primary pulmonary hypertension caused by mutation in SMAD9","type":"exact"},{"name":"pulmonary hypertension, primary, 2","type":"exact"},{"name":"pulmonary hypertension, primary, type 2","type":"exact"}],"termid":"MONDO:0014134","xrefs":{"Monarch":{"xref_id":"0014134"}}}


id: PBO:0084827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for iron-sulfur protein synthesis; performs scaffolding function during Fe/S cluster assembly; involved in Fe-S cluster assembly for both mitochondrial and cytosolic proteins; protein abundance increases under DNA replication stress; ISU2 has a paralog, ISU1, that arose from the whole genome duplication; isu1 isu2 double mutant is inviable; human homolog ISCU implicated in mitochondrial myopathy, can complement isu1 isu2 double mutant","termid":"PBO:0084827"}


id: MONDO:0022598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly absence of distal phalanges","termid":"MONDO:0022598","xrefs":{"Monarch":{"xref_id":"0022598"}}}


id: MONDO:0012318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, chronic lymphocytic, susceptibility to, 1","secondary_identifiers":["OMIM:609630","MEDGEN:351271","UMLS:C1864995"],"synonyms":[{"name":"Clls1","type":"related"},{"name":"leukemia, chronic lymphocytic, susceptibility to, 1","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0012318","xrefs":{"Monarch":{"xref_id":"0012318"}}}


id: MONDO:0014325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pachyonychia congenita in which the cause of the disease is a mutation in the KRT6B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pachyonychia congenita","termid":"MONDO:0016471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pachyonychia congenita 4","secondary_identifiers":["MEDGEN:811524","UMLS:C3714949","GARD:16006","OMIM:615728"],"synonyms":[{"name":"KRT6B pachyonychia congenita","type":"exact"},{"name":"PC4","type":"related"},{"name":"pachyonychia congenita 4","type":"exact"},{"name":"pachyonychia congenita caused by mutation in KRT6B","type":"exact"},{"name":"pachyonychia congenita type 4","type":"exact"}],"termid":"MONDO:0014325","xrefs":{"Monarch":{"xref_id":"0014325"}}}


id: PATO:0015003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A decrease in the ability of a process to produce its output.","definition_xrefs":["PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"process efficacy","termid":"PATO:0015002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased efficacy","termid":"PATO:0015003"}


id: PBO:0075884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 beta-galactoside alpha-2,6-sialyltransferase 2","termid":"PBO:0075884"}


id: MONDO:1010784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyoderma that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma, non-human animal","termid":"MONDO:1010142"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyoderma, dog","secondary_identifiers":["OMIA:001877-9615"],"termid":"MONDO:1010784","xrefs":{"Monarch":{"xref_id":"1010784"}}}


id: PBO:0075772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 3","termid":"PBO:0075772"}


id: MONDO:0023297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Guttate psoriasis is a skin condition in which small, red, and scaly teardrop-shaped spots appear on the arms, legs, and middle of the body.It is a relatively uncommon form of psoriasis. The condition often develops very suddenly, and is usually triggered by an infection (e.g., strep throat, bacteria infection, upper respiratory infections or other viral infections). Other triggers include injury to the skin, including cuts, burns, and insect bites, certain malarial and heart medications, stress, sunburn, and excessive alcohol consumption. Treatment depends on the severity of the symptoms, ranging from at-home over the counter remedies to medicines that suppress the body's immunesystem to sunlight and phototherapy.","definition_xrefs":["GARD:0010569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psoriasis","termid":"MONDO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"guttate psoriasis","secondary_identifiers":["ICD9:696.1","ICD10CM:L40.4","SCTID:37042000","UMLS:C0343052","icd11.foundation:1202062855","MEDGEN:91004"],"synonyms":[{"name":"guttate psoriasis","type":"exact"},{"name":"psoriasis guttata","type":"related"},{"name":"psoriasis guttate","type":"related"}],"termid":"MONDO:0023297","xrefs":{"Monarch":{"xref_id":"0023297"}}}


id: PBO:0054540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1940","termid":"PBO:0054540"}


id: GO:0008281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with sulfonylurea, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"sulfonylurea receptor activity","synonyms":[{"name":"sulphonylurea receptor activity","type":"exact"}],"termid":"GO:0008281"}


