# terms

id: PBO:0076369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 6","termid":"PBO:0076369"}


id: GO:0006504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent or non-covalent attachment of a geranylgeranyl group to the carboxy-terminus of a protein.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal protein geranylgeranylation (obsolete GO:0006504)","synonyms":[{"name":"C-terminal protein geranylgeranylation","type":"exact"}],"termid":"GO:0006504"}


id: GO:0003362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a noradrenergic neuron that is part of the brainstem.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noradrenergic neuron fate commitment","termid":"GO:0003359"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation involved in brainstem development","termid":"GO:0003361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron fate commitment involved in brainstem development","termid":"GO:0003362"}


id: GO:2000818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myoblast proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of myoblast proliferation","termid":"GO:2000291"},{"relation_name":"negatively_regulates","term_name":"myoblast proliferation","termid":"GO:0051450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myoblast proliferation","termid":"GO:2000818"}


id: PBO:0042270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6 pseudogene 5","termid":"PBO:0042270"}


id: GO:0035406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of a phosphate group to a tyrosine residue.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone-tyrosine phosphorylation (obsolete GO:0035406)","synonyms":[{"name":"histone tyrosine phosphorylation","type":"exact"}],"termid":"GO:0035406"}


id: MONDO:0018249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finger hyperphalangy - toe anomalies - severe pectus excavatum syndrome","secondary_identifiers":["GARD:21584","UMLS:C5190599","Orphanet:369979","MEDGEN:1673147"],"termid":"MONDO:0018249","xrefs":{"Monarch":{"xref_id":"0018249"}}}


id: MONDO:0011680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive congenital ichthyosis in which the cause of the disease is a mutation in the ALOXE3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self-healing collodion baby","termid":"MONDO:0017267"},{"relation_name":"is_a","term_name":"lamellar ichthyosis","termid":"MONDO:0017778"},{"relation_name":"is_a","term_name":"congenital non-bullous ichthyosiform erythroderma","termid":"MONDO:0019306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis 3","secondary_identifiers":["OMIM:606545","MESH:C564699","GARD:15393","MEDGEN:761665","UMLS:C3539888","DOID:0060711"],"synonyms":[{"name":"ARCI3","type":"exact"},{"name":"autosomal recessive congenital ichthyosis type 3","type":"exact"},{"name":"collodion baby, self-healing","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive 3","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive type 3","type":"exact"},{"name":"ichthyosis, lamellar, 5","type":"related"},{"name":"ichthyosis, lamellar, 5, formerly","type":"related"},{"name":"lamellar ichthyosis 5","type":"exact"}],"termid":"MONDO:0011680","xrefs":{"Monarch":{"xref_id":"0011680"}}}


id: PBO:0074586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 3B","termid":"PBO:0074586"}


id: SO:0001332
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Wybutosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine","secondary_identifiers":["RNAMOD:037"],"synonyms":[{"name":"yW","type":"exact"}],"termid":"SO:0001332"}


id: GO:0051286
data:
  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id: GO:0035901
data:
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id: MONDO:1012278
data:
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id: PBO:0090515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 and Swr1 complex YEATS family subunit Yaf9","termid":"PBO:0090515"}


id: PBO:0067518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 659, pseudogene","termid":"PBO:0067518"}


id: PR:P0CT57
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1402 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S14-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.13","synonyms":[{"name":"Spom972h-rps1402","type":"exact"}],"termid":"PR:P0CT57"}


id: PBO:0035911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_ubiquitination_during_vegetative_growth","termid":"PBO:0035911"}


id: GO:0032158
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A diffuse ring composed of a series of septin bars that run parallel to the long axis of the cell. This type of septin structure has been observed in a number of locations associated with polarized grown and/or deposition of new membrane, but not with cytokinesis, such as at the shmoo (mating projection) neck, at the junction between the mother cell and the germ tube (hypha) of a fungal cell growing filamentously.","definition_xrefs":["PMID:16151244","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"septin cytoskeleton","termid":"GO:0032156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin band","termid":"GO:0032158"}


id: GO:0032368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"is_a","term_name":"regulation of lipid localization","termid":"GO:1905952"},{"relation_name":"regulates","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of lipid transport","termid":"GO:0032368"}


id: MONDO:0004824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infection by any of the Candida species in a newborn infant up to 28 days old.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidiasis","termid":"MONDO:0002026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal candidiasis","secondary_identifiers":["UMLS:C0276682","ICD9:771.7","MEDGEN:547484","NCIT:C116810","DOID:9577","ICD10CM:P37.5","SCTID:414821002"],"synonyms":[{"name":"neonatal Candida infection","type":"exact"},{"name":"neonatal Monilia infection","type":"exact"},{"name":"neonatal candida infection","type":"exact"},{"name":"neonatal moniliasis","type":"exact"}],"termid":"MONDO:0004824","xrefs":{"Monarch":{"xref_id":"0004824"}}}


id: GO:1900820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of orlandin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"orlandin metabolic process","termid":"GO:1900819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"orlandin catabolic process","synonyms":[{"name":"orlandin breakdown","type":"exact"},{"name":"orlandin catabolism","type":"exact"},{"name":"orlandin degradation","type":"exact"}],"termid":"GO:1900820"}


id: MONDO:0006972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of alveolitis or pneumonitis caused by hypersensitivity to high level of inhaled nitrogen oxides, decomposition products of silage.","definition_xrefs":["MESH:D012832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silo filler disease","secondary_identifiers":["DOID:4374","icd11.foundation:1960063586","MEDGEN:11428","UMLS:C0037120","SCTID:61233003"],"synonyms":[{"name":"silo filler disease","type":"exact"},{"name":"silo filler's disease","type":"related"},{"name":"silo-fillers' disease","type":"exact"}],"termid":"MONDO:0006972","xrefs":{"Monarch":{"xref_id":"0006972"}}}


id: FYPO:0002248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of mannose binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal monosaccharide binding","termid":"FYPO:0002245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased mannose binding","termid":"FYPO:0002248"}


id: PBO:0001479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane anchored protein Mac1","termid":"PBO:0001479"}


id: PBO:0050567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H3","termid":"PBO:0050567"}


id: PBO:0053298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM zinc finger domain containing 4","termid":"PBO:0053298"}


id: GO:0019751
data:
  {"annotated_genes":["SJAG_00321","SJAG_04192","SJAG_01012","SJAG_00409","SJAG_03609","SJAG_03739","SJAG_04320","SJAG_01148","SJAG_04067","SJAG_00237","SJAG_01057","SJAG_03275","SJAG_03098","SJAG_04178","SJAG_02321","SJAG_00880","SJAG_04048","SJAG_01154","SJAG_02706","SJAG_02429","SJAG_01970","SJAG_01702","SJAG_00244","SJAG_04870","SJAG_02305","SJAG_03409"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[79000,104996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071543"},{"annotations":[106299,93773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[71786,78464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[65563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006071"},{"annotations":[88395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[65727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006021"},{"annotations":[70750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006020"},{"annotations":[74550,70751,70997,75561,93182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032958"},{"annotations":[88502,114838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[106710,106709,67884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043647"},{"annotations":[72471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"},{"annotations":[96699,73528,76677,105789,109507,78715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"},{"annotations":[69673,108321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["PMID:30240188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_00321":null,"SJAG_00409":null,"SJAG_00880":null,"SJAG_01012":null,"SJAG_01057":null,"SJAG_01148":null,"SJAG_01154":null,"SJAG_01702":null,"SJAG_01970":null,"SJAG_02305":null,"SJAG_02321":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_03098":null,"SJAG_03275":null,"SJAG_03409":null,"SJAG_03609":null,"SJAG_03739":null,"SJAG_04048":null,"SJAG_04067":null,"SJAG_04178":null,"SJAG_04192":null,"SJAG_04320":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"polyol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyhydric alcohol metabolic process","type":"exact"},{"name":"polyol metabolism","type":"exact"}],"termid":"GO:0019751","terms_by_termid":{"GO:0006020":null,"GO:0006021":null,"GO:0006062":null,"GO:0006071":null,"GO:0006114":null,"GO:0006729":null,"GO:0019563":null,"GO:0019564":null,"GO:0032958":null,"GO:0043647":null,"GO:0046512":null,"GO:0061613":null,"GO:0071543":null,"GO:0071545":null}}


id: GO:0010285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + LL-2,6-diaminopimelate = (S)-2,3,4,5-tetrahydrodipicolinate + L-glutamate + H2O + H+.","definition_xrefs":["EC:2.6.1.83","RHEA:23988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L,L-diaminopimelate aminotransferase activity","secondary_identifiers":["GO:0043742","KEGG_REACTION:R07613","MetaCyc:RXN-7737"],"synonyms":[{"name":"LL-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity","type":"exact"},{"name":"LL-DAP aminotransferase activity","type":"related"},{"name":"LL-DAP-AT activity","type":"related"},{"name":"LL-diaminopimelate aminotransferase activity","type":"exact"},{"name":"LL-diaminopimelate transaminase activity","type":"related"}],"termid":"GO:0010285"}


id: GO:0019486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-alanine into other compounds, including mevalonate semialdehyde, by transamination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-alanine catabolic process","termid":"GO:0019484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"beta-alanine catabolic process to mevalonate semialdehyde, by transamination","secondary_identifiers":["MetaCyc:BETA-ALA-DEGRADATION-I-PWY"],"synonyms":[{"name":"beta-alanine breakdown to mevalonate semialdehyde, by transamination","type":"exact"},{"name":"beta-alanine degradation to mevalonate semialdehyde, by transamination","type":"exact"}],"termid":"GO:0019486"}


id: PBO:0082521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42p-activated signal transducing kinase; member of the PAK (p21-activated kinase) family, along with Ste20p and Skm1p; involved in septin ring assembly, vacuole inheritance, cytokinesis, sterol uptake regulation; phosphorylates Cdc3p and Cdc10p; CLA4 has a paralog, SKM1, that arose from the whole genome duplication","termid":"PBO:0082521"}


id: GO:0061698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a glutaryl group (CO-CH2-CH2-CH2-CO) from a residue in a peptide or protein.","definition_xrefs":["PMID:24703693","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deglutarylation","termid":"GO:0061698"}


id: FYPO:0001748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of nickel ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nickel import","termid":"FYPO:0001747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased nickel import","synonyms":[{"name":"decreased cellular nickel import","type":"exact"},{"name":"decreased nickel cation import","type":"exact"},{"name":"decreased nickel import across plasma membrane","type":"exact"},{"name":"decreased nickel import during mitotic cell cycle","type":"related"},{"name":"decreased nickel import during vegetative growth","type":"exact"},{"name":"decreased nickel import into cell","type":"exact"},{"name":"decreased nickel ion import","type":"exact"},{"name":"reduced nickel import","type":"exact"}],"termid":"FYPO:0001748"}


id: PBO:0027601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actomyosin_contractile_ring_morphology","termid":"PBO:0027601"}


id: MONDO:0022769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia-bronchiectasis","termid":"MONDO:0022769","xrefs":{"Monarch":{"xref_id":"0022769"}}}


id: PBO:0070106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 20 pseudogene","termid":"PBO:0070106"}


id: GO:0002789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antifungal peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide production","termid":"GO:0002785"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide production","termid":"GO:0002788"},{"relation_name":"negatively_regulates","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antifungal peptide production","synonyms":[{"name":"down regulation of antifungal peptide production","type":"exact"},{"name":"down-regulation of antifungal peptide production","type":"exact"},{"name":"downregulation of antifungal peptide production","type":"exact"},{"name":"inhibition of antifungal peptide production","type":"narrow"}],"termid":"GO:0002789"}


id: PBO:0062620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily Z member 1","termid":"PBO:0062620"}


id: MONDO:0017384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A widespread acute rash characterized by fever and multiple small pustules on a reddish background.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"severe cutaneous adverse reaction","termid":"MONDO:0005594"},{"relation_name":"is_a","term_name":"toxic dermatosis","termid":"MONDO:0017396"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acute generalized exanthematous pustulosis","secondary_identifiers":["MESH:D056150","MedDRA:10048799","SCTID:702617007","GARD:21164","Orphanet:293173","ICD9:709.8","UMLS:C0877055","NCIT:C112122","MEDGEN:209091"],"synonyms":[{"name":"AGEP","type":"exact"},{"name":"pustular drug eruption","type":"exact"},{"name":"toxic pustuloderma","type":"exact"}],"termid":"MONDO:0017384","xrefs":{"Monarch":{"xref_id":"0017384"}}}


id: GO:0009927
data:
  {"annotated_genes":["SJAG_06592","SJAG_00331"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68539,77556],"is_not":false,"summary":null,"term":"GO:0009927"}]},"cv_name":"molecular_function","definition":"Serves as a phospho-His intermediate enabling the transfer of phospho group between a hybrid kinase and a response regulator.","definition_xrefs":["PMID:31386843","PMID:11842140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"},{"relation_name":"is_a","term_name":"molecular transducer activity","termid":"GO:0060089"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00331":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0004672","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"histidine phosphotransfer kinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0009927","terms_by_termid":{"GO:0009927":null}}


id: GO:1990264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any peptidyl-tyrosine dephosphorylation that is involved in inactivation of protein kinase activity.","definition_xrefs":["PMID:7501024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine dephosphorylation","termid":"GO:0035335"},{"relation_name":"part_of","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity","termid":"GO:1990264"}


id: GO:0018596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dimethylsilanediol + O2 + 2 H+ + 2 e- = H2O + hydroxymethylmethylsilanediol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylsilanediol hydroxylase activity (obsolete GO:0018596)","synonyms":[{"name":"DMSD hydroxylase activity","type":"exact"}],"termid":"GO:0018596"}


id: PBO:0046774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosin glycosyltransferase 2","termid":"PBO:0046774"}


id: PATO:0000027
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000027 electrolyte composition (obsolete PATO:0000027)","termid":"PATO:0000027"}


id: GO:0061458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the reproductive system over time from its formation to the mature structure. The reproductive system consists of the organs that function in reproduction.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive system development","termid":"GO:0061458"}


id: PBO:0056653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 20","termid":"PBO:0056653"}


id: GO:0050823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the structure and integrity of a peptide antigen and preventing it from being degraded.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide stabilization","termid":"GO:0050822"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antigen stabilization","synonyms":[{"name":"peptide antigen stabilization activity","type":"related"}],"termid":"GO:0050823"}


id: MONDO:1010997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal muscular atrophy that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy, non-human animal","termid":"MONDO:1010235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy, cattle","secondary_identifiers":["OMIA:000939-9913"],"termid":"MONDO:1010997","xrefs":{"Monarch":{"xref_id":"1010997"}}}


id: PBO:0064273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G6","termid":"PBO:0064273"}


id: GO:0000921
data:
  {"annotated_genes":["SJAG_04375","SJAG_02683","SJAG_00663"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72138,99919,103714],"is_not":false,"summary":null,"term":"GO:0000921"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of septins and associated proteins to form an organized structure resembling a ring at the cell cortex.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring organization","termid":"GO:0031106"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_02683":null,"SJAG_04375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"septin ring assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"septin assembly and septum biosynthesis","type":"broad"},{"name":"septin assembly and septum formation","type":"broad"}],"termid":"GO:0000921","terms_by_termid":{"GO:0000921":null}}


id: PBO:0082634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Dsc E3 ligase complex in vacuolar membranes; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; expression directly regulated by the metabolic and meiotic transcriptional regulator Ume6p; YIR014W is a non-essential gene","termid":"PBO:0082634"}


id: PBO:0086943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras-type GTPase; required for bud site selection during both axial and bipolar budding, for morphological changes in response to mating pheromone, and for efficient cell fusion; recruits Cdc24p to the incipient bud site, activating its guanyl-nucleotide exchange factor activity and the Rho-like GTPase, Cdc42p; localizes to the plasma membrane, the incipient bud site, polarized growth sites, the cell division site and the vacuole membrane; Ras superfamily member similar to mammalian Rap GTPases","termid":"PBO:0086943"}


id: PBO:0117147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSHR antisense RNA 1","termid":"PBO:0117147"}


id: GO:0023048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a lipid signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by lipid mediator (obsolete GO:0023048)","synonyms":[{"name":"signal initiation by lipid mediator","type":"exact"}],"termid":"GO:0023048"}


id: PBO:0087014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleoprotein that contains two RNA recognition motifs (RRM); RNP1 has a paralog, SBP1, that arose from the whole genome duplication","termid":"PBO:0087014"}


id: PBO:0038571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABR activator of RhoGEF and GTPase","termid":"PBO:0038571"}


id: GO:0021691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar Purkinje cell layer to attain its fully functional state. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:jid","ISBN:0838580343","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer development","termid":"GO:0021680"},{"relation_name":"part_of","term_name":"cerebellar cortex maturation","termid":"GO:0021699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer maturation","termid":"GO:0021691"}


id: PBO:0086096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to be associated with the nuclear pore complex; null mutant is viable, displays elevated frequency of mitochondrial genome loss and is sensitive to freeze-thaw stress","termid":"PBO:0086096"}


id: MONDO:0007601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial Mediterranean fever","termid":"MONDO:0018088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial Mediterranean fever, autosomal dominant","secondary_identifiers":["MESH:C565021","OMIM:134610","UMLS:C1851347","GARD:15069","MEDGEN:341987"],"synonyms":[{"name":"Fmf, autosomal dominant","type":"related"},{"name":"familial Mediterranean fever, AD","type":"exact"},{"name":"familial Mediterranean fever, autosomal dominant","type":"exact"}],"termid":"MONDO:0007601","xrefs":{"Monarch":{"xref_id":"0007601"}}}


id: PBO:0067556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 708, pseudogene","termid":"PBO:0067556"}


id: MONDO:0003522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent delay or absence in orgasm not accounted for by a medical reason.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"orgasm disorder","termid":"MONDO:0040674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male orgasm disorder","secondary_identifiers":["MEDGEN:19560","ICD10CM:F52.32","NCIT:C34959","SCTID:81903006","UMLS:C0033949","DOID:5576"],"synonyms":[{"name":"inhibited male orgasm","type":"exact"},{"name":"male orgasmic disorder","type":"exact"}],"termid":"MONDO:0003522","xrefs":{"Monarch":{"xref_id":"0003522"}}}


id: GO:0141175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A protein-protein adaptor that acts as a platform for receptor clustering, often serving to amplify the sensitivity of a signaling response.","definition_xrefs":["PMID:21453460","PMID:33597156","PMID:19747931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"receptor clustering activity","termid":"GO:0141175"}


id: GO:0036464
data:
  {"annotated_genes":["SJAG_03954","SJAG_02164","SJAG_01897","SJAG_01159","SJAG_03597","SJAG_01910","SJAG_03276","SJAG_01479","SJAG_03023","SJAG_02628","SJAG_04744","SJAG_01954","SJAG_00285","SJAG_03132","SJAG_02213","SJAG_04427","SJAG_02573","SJAG_05010","SJAG_00759","SJAG_02808","SJAG_03070","SJAG_04350","SJAG_01625","SJAG_02663","SJAG_00966","SJAG_03214","SJAG_03696","SJAG_01436","SJAG_01026","SJAG_04640","SJAG_05694","SJAG_04772","SJAG_00423","SJAG_02638","SJAG_01053","SJAG_04480","SJAG_04672","SJAG_16454","SJAG_02263","SJAG_01548","SJAG_03424","SJAG_02592","SJAG_00507","SJAG_01317","SJAG_04407","SJAG_02419","SJAG_01650","SJAG_03876","SJAG_03277","SJAG_00391","SJAG_02239","SJAG_03498","SJAG_04880","SJAG_01822","SJAG_01222","SJAG_16457","SJAG_02469","SJAG_03157","SJAG_02540","SJAG_02995","SJAG_03762","SJAG_00474","SJAG_03113","SJAG_03283","SJAG_01512","SJAG_00544","SJAG_04342","SJAG_00686","SJAG_03460"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105006,89688,94345,78679,105116,88940,73731,92808,88143,94575,72773,79235,70316,90098,74451,96903,109776,99729,76441,92345,92807,94155,94346,89269,97580,98725,113408,90056,72369,90146,87310,89980,89481,90109,95873,110861,91341,109673,113113,117078,106739,105376,105470,105469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010494"},{"annotations":[109676,77240,79453,90101,95380,112671,99731,75755,75364,72583,79283,114937,73618,78795,79516,79491,89483,74320,75629,76439,76407,73955,116394,78776,70112,78589,69734,70755,69594,71495,74149,77583,72911,79830,77421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000932"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein granule located in the cytoplasm.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:15121898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein granule","termid":"GO:0035770"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":69,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00391":null,"SJAG_00423":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00966":null,"SJAG_01026":null,"SJAG_01053":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01436":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01625":null,"SJAG_01650":null,"SJAG_01822":null,"SJAG_01897":null,"SJAG_01910":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02469":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02663":null,"SJAG_02808":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03070":null,"SJAG_03113":null,"SJAG_03132":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03460":null,"SJAG_03498":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_03876":null,"SJAG_03954":null,"SJAG_04342":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic ribonucleoprotein granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Staufen granule","type":"narrow"}],"termid":"GO:0036464","terms_by_termid":{"GO:0000932":null,"GO:0010494":null}}


id: PBO:0111691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 QL1","termid":"PBO:0111691"}


id: FYPO:0000108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to menadione. Cells stop growing (and may die) at a concentration of menadione that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to menadione","synonyms":[{"name":"hypersensitive to menadione","type":"exact"},{"name":"sensitive to menadione during mitotic cell cycle","type":"related"},{"name":"sensitive to menadione during vegetative growth","type":"exact"},{"name":"sensitive to vitamin K3","type":"related"}],"termid":"FYPO:0000108"}


id: GO:0098655
data:
  {"annotated_genes":["SJAG_01639","SJAG_01447","SJAG_04028","SJAG_01353","SJAG_00212","SJAG_01119","SJAG_02399","SJAG_01129","SJAG_00080","SJAG_03079","SJAG_01190","SJAG_03490","SJAG_03516","SJAG_04096","SJAG_04111","SJAG_00985","SJAG_02564","SJAG_05204","SJAG_01078","SJAG_03401","SJAG_00542","SJAG_00438","SJAG_04167","SJAG_02735","SJAG_00915","SJAG_02440","SJAG_02780","SJAG_01077","SJAG_02504","SJAG_04471","SJAG_03606","SJAG_04737","SJAG_MIT09","SJAG_03608","SJAG_04955","SJAG_01803","SJAG_01990","SJAG_00211","SJAG_07003","SJAG_00328","SJAG_02457","SJAG_00836","SJAG_04757","SJAG_04743","SJAG_03528","SJAG_01913","SJAG_01355","SJAG_03820","SJAG_04258","SJAG_00516","SJAG_MIT37","SJAG_02322","SJAG_01400","SJAG_01669","SJAG_04122","SJAG_01471","SJAG_02877","SJAG_03406","SJAG_03925","SJAG_04675","SJAG_03497","SJAG_01493","SJAG_01541","SJAG_01090","SJAG_04185","SJAG_02023","SJAG_02105","SJAG_00222","SJAG_02883","SJAG_03873","SJAG_02532","SJAG_03850","SJAG_04867","SJAG_02598","SJAG_MIT15","SJAG_03595","SJAG_04698","SJAG_00136","SJAG_00547","SJAG_04616","SJAG_04246","SJAG_04668","SJAG_02968","SJAG_02484","SJAG_04830","SJAG_04905","SJAG_03895","SJAG_03960","SJAG_02782","SJAG_01007","SJAG_00601","SJAG_02779","SJAG_05229","SJAG_04260","SJAG_03866","SJAG_03399","SJAG_00133","SJAG_01435","SJAG_00296","SJAG_04892","SJAG_03631","SJAG_00976","SJAG_02646","SJAG_02958","SJAG_03114","SJAG_01397","SJAG_04015","SJAG_02834","SJAG_00057","SJAG_02019","SJAG_03667","SJAG_05294","SJAG_02445","SJAG_04551","SJAG_02473","SJAG_02578","SJAG_04068","SJAG_01817"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58375,61431,68829,69080],"is_not":false,"summary":null,"term":"GO:0098655"},{"annotations":[117997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"},{"annotations":[63795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070574"},{"annotations":[97147,95423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[74218,66720,114228,92195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[115355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[69276,94611,65682,72175,73166,78241,95245,109165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070588"},{"annotations":[107647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060003"},{"annotations":[114381,87729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[101282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097430"},{"annotations":[103578,61921,104420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035434"},{"annotations":[90994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[69941,97878,113580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[113003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[75412,77698,61335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034755"},{"annotations":[89062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[75306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"},{"annotations":[62396,56919,57456,116767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903830"},{"annotations":[63794,70430,108463,61336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071421"},{"annotations":[77128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045016"},{"annotations":[94015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140141"},{"annotations":[113153,91012],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[79766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"},{"annotations":[101942],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[112138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097623"},{"annotations":[70347,72129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990573"},{"annotations":[57493,67208,79901,61207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071805"},{"annotations":[60867,66789,57892,66460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120029"},{"annotations":[61172,58198,64842,94637,62159,107698,61801,67308,68121,90996,59272,68708,118861,63779,63891,64564,57299,61702,67111,61121,58435,67544,57492,60784,58522,60558,60515,68195,60832,67617,108586,95560,66288,59633,69198,72744,62657,64507,118866,59307,78204,118855,61247,61456,64184,57960,59835,62542,63315,63793,92372,60612,66693,63750,103474,60188,65290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902600"},{"annotations":[108464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"},{"annotations":[61837,61946,68972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"},{"annotations":[66787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036376"},{"annotations":[61171,67207,89104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035725"},{"annotations":[114129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"},{"annotations":[113004,103968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"},{"annotations":[93568,93567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[104107,74409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"},{"annotations":[78095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071577"}]},"cv_name":"biological_process","definition":"The process in which a monoatomic cation is transported across a membrane. Monatomic cations (also called simple cations) are positively charged ions consisting of exactly one atom.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation transport","termid":"GO:0006812"},{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":118,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_00080":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00211":null,"SJAG_00212":null,"SJAG_00222":null,"SJAG_00296":null,"SJAG_00328":null,"SJAG_00438":null,"SJAG_00516":null,"SJAG_00542":null,"SJAG_00547":null,"SJAG_00601":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01007":null,"SJAG_01077":null,"SJAG_01078":null,"SJAG_01090":null,"SJAG_01119":null,"SJAG_01129":null,"SJAG_01190":null,"SJAG_01353":null,"SJAG_01355":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01493":null,"SJAG_01541":null,"SJAG_01639":null,"SJAG_01669":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_01990":null,"SJAG_02019":null,"SJAG_02023":null,"SJAG_02105":null,"SJAG_02322":null,"SJAG_02399":null,"SJAG_02440":null,"SJAG_02445":null,"SJAG_02457":null,"SJAG_02473":null,"SJAG_02484":null,"SJAG_02504":null,"SJAG_02532":null,"SJAG_02564":null,"SJAG_02578":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02735":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02782":null,"SJAG_02834":null,"SJAG_02877":null,"SJAG_02883":null,"SJAG_02958":null,"SJAG_02968":null,"SJAG_03079":null,"SJAG_03114":null,"SJAG_03399":null,"SJAG_03401":null,"SJAG_03406":null,"SJAG_03490":null,"SJAG_03497":null,"SJAG_03516":null,"SJAG_03528":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03631":null,"SJAG_03667":null,"SJAG_03820":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_03873":null,"SJAG_03895":null,"SJAG_03925":null,"SJAG_03960":null,"SJAG_04015":null,"SJAG_04028":null,"SJAG_04068":null,"SJAG_04096":null,"SJAG_04111":null,"SJAG_04122":null,"SJAG_04167":null,"SJAG_04185":null,"SJAG_04246":null,"SJAG_04258":null,"SJAG_04260":null,"SJAG_04471":null,"SJAG_04551":null,"SJAG_04616":null,"SJAG_04668":null,"SJAG_04675":null,"SJAG_04698":null,"SJAG_04737":null,"SJAG_04743":null,"SJAG_04757":null,"SJAG_04830":null,"SJAG_04867":null,"SJAG_04892":null,"SJAG_04905":null,"SJAG_04955":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05294":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"monoatomic cation transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0099132"],"synonyms":[{"name":"ATP hydrolysis coupled cation transmembrane transport","type":"narrow"},{"name":"cation transmembrane transport","type":"broad"}],"termid":"GO:0098655","terms_by_termid":{"GO:0034755":null,"GO:0035434":null,"GO:0035725":null,"GO:0036249":null,"GO:0036376":null,"GO:0036444":null,"GO:0044718":null,"GO:0045016":null,"GO:0048250":null,"GO:0060003":null,"GO:0061454":null,"GO:0061856":null,"GO:0070574":null,"GO:0070588":null,"GO:0071421":null,"GO:0071577":null,"GO:0071578":null,"GO:0071805":null,"GO:0097430":null,"GO:0097623":null,"GO:0098655":null,"GO:0098703":null,"GO:0098705":null,"GO:0098711":null,"GO:0098716":null,"GO:0120029":null,"GO:0140141":null,"GO:0140146":null,"GO:0140147":null,"GO:0140209":null,"GO:0140466":null,"GO:1902600":null,"GO:1903830":null,"GO:1904257":null,"GO:1905665":null,"GO:1905949":null,"GO:1990573":null,"GO:1990616":null}}


id: MONDO:0003044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A chondrosarcoma that is located in exclusively soft tissue.","definition_xrefs":["PMID:16084955","DOID:4549"],"gene_count":0,"genotype_count":0,"name":"obsolete extraosseous chondrosarcoma (obsolete MONDO:0003044)","termid":"MONDO:0003044","xrefs":{"Monarch":{"xref_id":"0003044"}}}


id: FYPO:0001941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cerulenin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cerulenin","synonyms":[{"name":"resistance to cerulenin during mitotic cell cycle","type":"related"},{"name":"resistance to cerulenin during vegetative growth","type":"exact"},{"name":"resistant to cerulenin","type":"exact"}],"termid":"FYPO:0001941"}


id: PBO:0052330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1671","termid":"PBO:0052330"}


id: PBO:0072198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 15","termid":"PBO:0072198"}


id: GO:1902389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a ceramide 1-phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:23863933","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"ceramide transport","termid":"GO:0035627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"ceramide 1-phosphate transport","termid":"GO:1902389"}


id: GO:0140344
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Directly binding to a triglyceride and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["PMID:23475612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0120013","GO:0005215"],"is_obsolete":false,"name":"triglyceride transfer activity","synonyms":[{"name":"triglyceride carrier activity","type":"exact"}],"termid":"GO:0140344"}


id: FYPO:0004314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the CENP-A containing chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric chromatin","termid":"FYPO:0005072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to CENP-A containing chromatin","synonyms":[{"name":"normal protein localisation to CENP-A containing chromatin","type":"exact"},{"name":"normal protein localization to CENP-A containing chromatin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to CENP-A containing chromatin during vegetative growth","type":"exact"},{"name":"normal protein localization to centromeric core region chromatin","type":"exact"}],"termid":"FYPO:0004314"}


id: PBO:0060273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 7B","termid":"PBO:0060273"}


id: GO:1902909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of melanosome transport.","definition_xrefs":["GOC:TermGenie","GOC:als","PMID:23334344","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of melanosome transport","termid":"GO:1902908"},{"relation_name":"negatively_regulates","term_name":"melanosome transport","termid":"GO:0032402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of melanosome transport","synonyms":[{"name":"down regulation of melanosome transport","type":"exact"},{"name":"down-regulation of melanosome transport","type":"exact"},{"name":"downregulation of melanosome transport","type":"exact"},{"name":"inhibition of melanosome transport","type":"narrow"}],"termid":"GO:1902909"}


id: MONDO:0010946
data:
  {"annotated_genes":["SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85141],"is_not":false,"summary":null,"term":"MONDO:0010946"}]},"cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the PRKAG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"},{"relation_name":"is_a","term_name":"PRKAG2-related cardiomyopathy","termid":"MONDO:0800484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:331466","DOID:0110312","MESH:C563436","UMLS:C1833236","OMIM:600858"],"synonyms":[{"name":"CMH6","type":"exact"},{"name":"PRKAG2 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic 6","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 6","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 6","type":"exact"},{"name":"cardiomyopathy, hypertrophic 6","type":"exact"},{"name":"hypertrophic cardiomyopathy 6","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in PRKAG2","type":"exact"},{"name":"hypertrophic cardiomyopathy type 6","type":"exact"}],"termid":"MONDO:0010946","terms_by_termid":{"MONDO:0010946":null},"xrefs":{"Monarch":{"xref_id":"0010946"}}}


id: GO:0002682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an immune system process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immune system process","termid":"GO:0002682"}


id: PBO:0043967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta","termid":"PBO:0043967"}


id: PBO:0040720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL9 pseudogene 1","termid":"PBO:0040720"}


id: PBO:0088721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-1-phosphate guanyltransferase","termid":"PBO:0088721"}


id: MONDO:0700100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, non-human animal","termid":"MONDO:0700100","xrefs":{"Monarch":{"xref_id":"0700100"}}}


id: GO:1901933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bicyclogermacrene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"bicyclogermacrene metabolic process","termid":"GO:1901932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"bicyclogermacrene catabolic process","synonyms":[{"name":"bicyclogermacrene breakdown","type":"exact"},{"name":"bicyclogermacrene catabolism","type":"exact"},{"name":"bicyclogermacrene degradation","type":"exact"}],"termid":"GO:1901933"}


id: GO:0036178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to a neutral pH (pH close to 7) stimulus.","definition_xrefs":["GOC:di","PMID:6374461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to neutral pH","termid":"GO:0036176"},{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:0036177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}


id: GO:0061462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a lysosome.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to vacuole","termid":"GO:0072665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to lysosome","termid":"GO:0061462"}


id: PBO:0045742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBF family member 4","termid":"PBO:0045742"}


id: GO:2000388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antral ovarian follicle growth.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"is_a","term_name":"regulation of antral ovarian follicle growth","termid":"GO:2000387"},{"relation_name":"positively_regulates","term_name":"antral ovarian follicle growth","termid":"GO:0001547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antral ovarian follicle growth","termid":"GO:2000388"}


id: GO:0106034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of an assembled [2Fe-2S] cluster from a scaffold protein to an acceptor protein that contributes to the attainment of the full functional capacity of a protein.","definition_xrefs":["PMID:23615440"],"gene_count":0,"genotype_count":0,"name":"obsolete protein maturation by [2Fe-2S] cluster transfer (obsolete GO:0106034)","termid":"GO:0106034"}


id: PBO:0030929
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_citrate_(Si)-synthase_activity","termid":"PBO:0030929"}


id: MONDO:0044788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intrahepatic cholangiocarcinoma that arises from the intrahepatic large bile ducts.","definition_xrefs":["NCIT:C96804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrahepatic cholangiocarcinoma","termid":"MONDO:0003210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"perihilar intrahepatic cholangiocarcinoma","secondary_identifiers":["ONCOTREE:PHCH"],"synonyms":[{"name":"perihilar ICC","type":"exact"},{"name":"perihilar bile duct carcinoma","type":"exact"},{"name":"perihilar cholangiocarcinoma","type":"related"},{"name":"perihilar intrahepatic cholangiocarcinoma","type":"exact"}],"termid":"MONDO:0044788","xrefs":{"Monarch":{"xref_id":"0044788"}}}


id: MONDO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cavernous hemangioma arising from the brain and meninges.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial hemangioma","termid":"MONDO:0002328"},{"relation_name":"is_a","term_name":"cavernous hemangioma","termid":"MONDO:0003155"},{"relation_name":"is_a","term_name":"central nervous system hematopoietic neoplasm","termid":"MONDO:0003641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"intracranial cavernous angioma","secondary_identifiers":["NANDO:2200852","MEDGEN:232659","UMLS:C1334237","NCIT:C5432","DOID:2516","SCTID:445513004"],"synonyms":[{"name":"intracranial cavernoma","type":"exact"},{"name":"intracranial cavernous angioma","type":"exact"},{"name":"intracranial cavernous hemangioma","type":"exact"}],"termid":"MONDO:0002327","xrefs":{"Monarch":{"xref_id":"0002327"}}}


id: PATO:0001074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001074 absolute impulse (obsolete PATO:0001074)","termid":"PATO:0001074"}


id: PR:Q09843
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication factor C subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01799","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.02","secondary_identifiers":["UniProtKB:Q09843"],"synonyms":[{"name":"Spom972h-RFC4","type":"exact"},{"name":"activator 1 41 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"replication factor C2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09843"}


id: GO:0004954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a prostanoid, any compound based on or derived from the prostanoate structure, to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid receptor activity","termid":"GO:0004953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prostanoid receptor activity","termid":"GO:0004954"}


id: MONDO:0006207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinosarcoma that arises from the fallopian tube. It usually affects postmenopausal women and presents with abdominal pain, abdominal distension or genital bleeding. The prognosis is usually poor.","definition_xrefs":["NCIT:C40124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinosarcoma","termid":"MONDO:0002928"},{"relation_name":"is_a","term_name":"fallopian tube carcinoma","termid":"MONDO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube carcinosarcoma","secondary_identifiers":["DOID:1970","EFO:1000252","MEDGEN:273294","UMLS:C1517117"],"synonyms":[{"name":"fallopian tube carcinosarcoma","type":"exact"},{"name":"fallopian tube malignant mixed Mullerian tumor","type":"exact"},{"name":"fallopian tube malignant mixed Mullerian tumour","type":"exact"},{"name":"fallopian tube malignant mixed mesodermal (Müllerian) tumor","type":"exact"},{"name":"fallopian tube malignant mixed mesodermal (Müllerian) tumour","type":"exact"},{"name":"fallopian tube malignant mixed mesodermal (mullerian) tumor","type":"exact"},{"name":"fallopian tube malignant mixed mesodermal (mullerian) tumour","type":"exact"}],"termid":"MONDO:0006207","xrefs":{"Monarch":{"xref_id":"0006207"}}}


id: GO:0018646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (1S,4R)-1-hydroxy-2-oxolimonene + NADPH + O2 = NADP+ + OH- + (3R)-3-isopropenyl-6-oxoheptanoate.","definition_xrefs":["UM-BBD_reactionID:r0736"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxy-2-oxolimonene 1,2-monooxygenase activity (obsolete GO:0018646)","termid":"GO:0018646"}


id: GO:0044632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the rate of complement activation by the lectin pathway, in a different organism.","definition_xrefs":["PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of complement activation, lectin pathway in another organism (obsolete GO:0044632)","synonyms":[{"name":"negative regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044632"}


id: MONDO:0030868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 49","secondary_identifiers":["MEDGEN:1742668","OMIM:619144","UMLS:C5436887","DOID:0112271"],"synonyms":[{"name":"SPGF49","type":"exact"},{"name":"spermatogenic failure 49","type":"exact"}],"termid":"MONDO:0030868","xrefs":{"Monarch":{"xref_id":"0030868"}}}


id: GO:0141010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transposable element silencing mechanism mediated by RNA-directed DNA methylation. RNA-directed DNA methylation is a gene silencing process in which small interfering RNAs (siRNAs) guide DNA methylation to the siRNA-generating genomic loci and other loci that are homologous to the siRNAs for de novo DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:32381626","PMID:36570931","PMID:32719317","PMID:28633017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene silencing by siRNA-directed DNA methylation","termid":"GO:0080188"},{"relation_name":"is_a","term_name":"transposable element silencing by heterochromatin formation","termid":"GO:0141005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"transposable element silencing by siRNA-mediated DNA methylation","synonyms":[{"name":"retrostransposon silencing by RdDM","type":"exact"},{"name":"retrotransposon silencing by RNA-directed DNA methylation","type":"related"},{"name":"retrotransposon silencing by siRNA-directed DNA methylation","type":"narrow"},{"name":"transposable element silencing by siRNA-directed DNA methylation","type":"exact"}],"termid":"GO:0141010"}


id: MONDO:0016184
data:
  {"annotated_genes":["SJAG_01491"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","termid":"MONDO:0016155"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01491":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0002320"],"is_obsolete":false,"name":"qualitative or quantitative defects of protein O-mannosyltransferase 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680849","Orphanet:209030","MEDGEN:1842612","GARD:20423"],"synonyms":[{"name":"qualitative or quantitative defects of protein O-mannosyltransferase type 1","type":"exact"}],"termid":"MONDO:0016184","terms_by_termid":{"MONDO:0012248":null},"xrefs":{"Monarch":{"xref_id":"0016184"}}}


id: PBO:0082784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import of all mitochondrially directed proteins; involved in transfer of precursors from the Tom70p and Tom20p receptors to the Tom40p pore","termid":"PBO:0082784"}


id: GO:0047186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetyl-beta-neuraminate + acetyl-CoA = CMP-N-acetyl-9-O-acetyl-beta-neuraminate + CoA.","definition_xrefs":["EC:2.3.1.45","RHEA:81827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"N-acetylneuraminate 9-O-acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.45-RXN"],"synonyms":[{"name":"N-acetylneuraminate 7(8)-O-acetyltransferase activity","type":"related"},{"name":"N-acetylneuraminate 7,8-O-acetyltransferase activity","type":"related"},{"name":"N-acetylneuraminate 7-O(or 9-O)-acetyltransferase activity","type":"exact"},{"name":"N-acetylneuraminate O7-(or O9-)acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate 7-O(or 9-O)-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate-7- and/or 8-O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate-7- or 8-O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate-9(7)-O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate-9(or 7)-O-acetyltransferase activity","type":"related"},{"name":"glycoprotein 7(9)-O-acetyltransferase activity","type":"related"},{"name":"sialate O-acetyltransferase","type":"broad"}],"termid":"GO:0047186"}


id: PBO:0074101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 4","termid":"PBO:0074101"}


id: SO:0001592
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes a disruption of the translational reading frame, by shifting one base ahead.","direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_1_frameshift_variant","synonyms":[{"name":"-1 frameshift variant","type":"exact"},{"name":"minus 1 frameshift variant","type":"exact"}],"termid":"SO:0001592"}


id: MOD:00993
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenyl ester","synonyms":[{"name":"OPh","type":"exact"}],"termid":"MOD:00993"}


id: MONDO:0957217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical dysplasia, complex, with other brain malformations 12","secondary_identifiers":["MEDGEN:1841043","UMLS:C5830407","OMIM:620316"],"termid":"MONDO:0957217","xrefs":{"Monarch":{"xref_id":"0957217"}}}


id: MONDO:0008141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ossicular malformations, familial","secondary_identifiers":["MEDGEN:371652","UMLS:C1833790","OMIM:165680","MESH:C537142"],"synonyms":[{"name":"familial middle ear ossicular anomalies","type":"related"},{"name":"familial ossicular malformations","type":"related"},{"name":"ossicular malformations, familial","type":"exact"}],"termid":"MONDO:0008141","xrefs":{"Monarch":{"xref_id":"0008141"}}}


id: GO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Immune response taking place in the Peyer's patch, nodular lymphoid structures on the serosal surface of the small intestine.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response in gut-associated lymphoid tissue","termid":"GO:0002387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response in Peyer's patch","termid":"GO:0002388"}


id: PBO:0072970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1C member 2","termid":"PBO:0072970"}


id: GO:0033660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of the resistance gene-dependent defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host resistance gene-dependent defense response","termid":"GO:0052158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host resistance gene-dependent defense response","synonyms":[{"name":"down regulation by symbiont of defense response in host by specific elicitors","type":"exact"},{"name":"down-regulation by symbiont of host gene-for-gene resistance","type":"exact"},{"name":"downregulation by symbiont of pathogen-race/host plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"inhibition by symbiont of host resistance gene-dependent defense response","type":"narrow"},{"name":"negative regulation by symbiont of host resistance gene-dependent defense response","type":"exact"},{"name":"suppression by symbiont of host resistance gene-dependent defense response","type":"exact"}],"termid":"GO:0033660"}


id: MONDO:0007535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emphysema, hereditary pulmonary","secondary_identifiers":["MEDGEN:338765","UMLS:C1851718","MESH:C565057","OMIM:130700"],"synonyms":[{"name":"emphysema, hereditary pulmonary","type":"exact"}],"termid":"MONDO:0007535","xrefs":{"Monarch":{"xref_id":"0007535"}}}


id: PBO:0066488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A","termid":"PBO:0066488"}


id: PBO:0076513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 14","termid":"PBO:0076513"}


id: GO:0018707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-phenanthrol + X-CH3 = X + 1-methoxyphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phenanthrol methyltransferase activity (obsolete GO:0018707)","termid":"GO:0018707"}


id: GO:0047008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + pregnan-21-ol = H+ + NADPH + pregnan-21-al.","definition_xrefs":["RHEA:23712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pregnan-21-ol dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R03044","EC:1.1.1.151","MetaCyc:1.1.1.151-RXN"],"synonyms":[{"name":"21-hydroxy steroid (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"broad"},{"name":"21-hydroxy steroid dehydrogenase (nicotinamide adenine dinucleotide phosphate) activity","type":"broad"},{"name":"21-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"21-hydroxysteroid dehydrogenase (NADP+) activity","type":"broad"},{"name":"21-hydroxysteroid:NADP+ 21-oxidoreductase activity","type":"broad"},{"name":"NADP-21-hydroxysteroid dehydrogenase activity","type":"broad"}],"termid":"GO:0047008"}


id: _global:contains
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The inverse of contained_by.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contains","termid":"_global:contains"}


id: PBO:0054698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2107","termid":"PBO:0054698"}


id: PBO:0073435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b, subunit 4 pseudogene 1","termid":"PBO:0073435"}


id: GO:1905350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Y-shaped link. Two distinct protein complexes are known to be involved in proper linker assembly: the MKS complex and the NPHP complex. Improper assembly of Y-shaped links may cause malfunctioning of the transition zone as a molecular gate.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:4554367","PMID:24664739","GOC:cilia","PMID:26595381","PMID:23728985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"Y-shaped link assembly","synonyms":[{"name":"Y-link assembly","type":"related"},{"name":"Y-link formation","type":"related"},{"name":"Y-link structure assembly","type":"related"},{"name":"Y-link structure formation","type":"related"},{"name":"Y-shaped assemblage assembly","type":"related"},{"name":"Y-shaped assemblage formation","type":"related"},{"name":"Y-shaped fiber assembly","type":"related"},{"name":"Y-shaped fiber formation","type":"related"},{"name":"Y-shaped fibre assembly","type":"related"},{"name":"Y-shaped fibre formation","type":"related"},{"name":"Y-shaped link formation","type":"exact"},{"name":"Y-shaped linker assembly","type":"related"},{"name":"Y-shaped linker formation","type":"related"},{"name":"membrane-microtubule complex assembly","type":"related"},{"name":"membrane-microtubule complex formation","type":"related"}],"termid":"GO:1905350"}


id: PBO:0060908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEUROG2 and ZGRF1 antisense RNA 1","termid":"PBO:0060908"}


id: PBO:0071178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 19","termid":"PBO:0071178"}


id: GO:0009877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of nitrogen-fixing root nodules on plant roots.","definition_xrefs":["PMID:21856632","PMID:33317178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nodulation","secondary_identifiers":["GO:0009878"],"synonyms":[{"name":"nodule development","type":"exact"},{"name":"nodule formation","type":"exact"},{"name":"nodule morphogenesis","type":"related"}],"termid":"GO:0009877"}


id: FYPO:0000128
data:
  {"alleles_by_uniquename":{"SJAG_01081:allele-1":{"allele_type":"nonsense_mutation","description":"S427>stop","gene_uniquename":"SJAG_01081","name":"ade6-domE","uniquename":"SJAG_01081:allele-1"},"SJAG_01081:allele-2":{"allele_type":"amino_acid_mutation","description":"Q262A","gene_uniquename":"SJAG_01081","name":"ade6-domK","uniquename":"SJAG_01081:allele-2"},"SJAG_01081:allele-3":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01081","name":"ade6delta","uniquename":"SJAG_01081:allele-3"},"SJAG_03164:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03164","name":"ura4delta","uniquename":"SJAG_03164:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119373,119026,119027,119025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000747"},{"annotations":[119374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001012"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a cell requires a particular organic compound, which is not required by a wild-type cell for its growth. Auxotrophy usually results from a cell's inability to synthesize the compound.","definition_xrefs":["PomBase:mah","PATO:0000422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_03164":null},"genotype_count":4,"genotypes_by_uniquename":{"ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type":{"display_name":"ade6-domE(S427>stop)","display_uniquename":"ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-1","expression":"Not assayed or wild type"}]}]},"ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ade6-domK(Q262A aa)","display_uniquename":"ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-2","expression":"Not assayed or wild type"}]}]},"ade6delta":{"display_name":"ade6delta","display_uniquename":"ade6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-3","expression":"Null"}]}]},"ura4delta":{"display_name":"ura4delta","display_uniquename":"ura4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03164:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"auxotrophy","references_by_uniquename":{"PMID:19330769":null,"PMID:21905090":null},"single_locus_annotated_genes":["SJAG_01081","SJAG_03164"],"single_locus_genotype_uniquenames":["ura4delta","ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type","ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type","ade6delta"],"synonyms":[{"name":"auxotrophic growth","type":"exact"},{"name":"auxotrophy during mitotic cell cycle","type":"related"},{"name":"auxotrophy during vegetative growth","type":"exact"}],"termid":"FYPO:0000128","terms_by_termid":{"FYPO:0000747":null,"FYPO:0001012":null}}


id: GO:0061262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle formation","termid":"GO:0072033"},{"relation_name":"part_of","term_name":"mesonephric renal vesicle morphogenesis","termid":"GO:0061243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric renal vesicle formation","synonyms":[{"name":"mesonephros formation","type":"exact"}],"termid":"GO:0061262"}


id: MONDO:0007713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facial nerve disorder","termid":"MONDO:0002098"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clonic hemifacial spasm","secondary_identifiers":["OMIM:141405","ICD10CM:G51.3","MEDGEN:374760","GARD:17137","MESH:C564198","UMLS:C1841639","icd11.foundation:353312397","icd11.foundation:64352031","Orphanet:221083"],"synonyms":[{"name":"facial hemispasm","type":"exact"},{"name":"focal myoclonus of face","type":"exact"},{"name":"hemifacial spasm","type":"related"},{"name":"hemifacial spasm, familial","type":"related"}],"termid":"MONDO:0007713","xrefs":{"Monarch":{"xref_id":"0007713"}}}


id: PBO:0041533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 49","termid":"PBO:0041533"}


id: PBO:0035765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle_assembly_checkpoint","termid":"PBO:0035765"}


id: PBO:0030278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_population_growth_rate","termid":"PBO:0030278"}


id: GO:0045818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycogen catabolic process","termid":"GO:0005981"},{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of glycogen metabolic process","termid":"GO:0070874"},{"relation_name":"negatively_regulates","term_name":"glycogen catabolic process","termid":"GO:0005980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"negative regulation of glycogen catabolic process","synonyms":[{"name":"down regulation of glycogen catabolic process","type":"exact"},{"name":"down-regulation of glycogen catabolic process","type":"exact"},{"name":"downregulation of glycogen catabolic process","type":"exact"},{"name":"inhibition of glycogen catabolic process","type":"narrow"},{"name":"negative regulation of glycogen breakdown","type":"exact"},{"name":"negative regulation of glycogen catabolism","type":"exact"},{"name":"negative regulation of glycogen degradation","type":"exact"},{"name":"negative regulation of glycogenolysis","type":"exact"}],"termid":"GO:0045818"}


id: GO:0018555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene + NADH + H+ + O2 = NAD+ + cis-3,4-dihydroxy-3,4-dihydrophenanthrene.","definition_xrefs":["UM-BBD_reactionID:r0455"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene dioxygenase activity (obsolete GO:0018555)","termid":"GO:0018555"}


id: PBO:0001049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRG family Clr6 histone deacetylase complex subunit Alp13","termid":"PBO:0001049"}


id: GO:0009166
data:
  {"annotated_genes":["SJAG_04870","SJAG_03660","SJAG_02107","SJAG_00685","SJAG_02009","SJAG_04169","SJAG_03676","SJAG_00605","SJAG_04495","SJAG_04487","SJAG_03091","SJAG_03828","SJAG_02796","SJAG_02135","SJAG_03903","SJAG_00461","SJAG_06622","SJAG_04192","SJAG_00839","SJAG_00027","SJAG_01310","SJAG_03373","SJAG_02945","SJAG_04334","SJAG_06621","SJAG_04048","SJAG_05314","SJAG_02481","SJAG_04939","SJAG_02785","SJAG_02369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[116170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[116142,94807,98066,109187,109188,77659,105257,109190,109189,109185,103178,103432,105258,105628,109184,97793,105627,94318,105259,109186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[78998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901909"},{"annotations":[78997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"},{"annotations":[111243,116883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015964"},{"annotations":[98790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[79267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[88395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[72169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[72172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[72862,75832],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[69868],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[76072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04169":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04939":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide breakdown","type":"exact"},{"name":"nucleotide catabolism","type":"exact"},{"name":"nucleotide degradation","type":"exact"}],"termid":"GO:0009166","terms_by_termid":{"GO:0006110":null,"GO:0006198":null,"GO:0006256":null,"GO:0006742":null,"GO:0015964":null,"GO:0019677":null,"GO:0035863":null,"GO:0045820":null,"GO:0046081":null,"GO:0061613":null,"GO:0061621":null,"GO:1901907":null,"GO:1901909":null,"GO:1901911":null}}


id: MONDO:1012734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome that occurs in sheep due to a mutation in the EDNRB gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome, non-human animal","termid":"MONDO:1011447"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waardenburg syndrome, EDNRB-related, sheep","secondary_identifiers":["OMIA:001765-9940"],"synonyms":[{"name":"Waardenburg syndrome, type 4A, sheep","type":"related"},{"name":"familiar hypopigmentation syndrome, sheep","type":"related"},{"name":"lethal white syndrome, sheep","type":"related"}],"termid":"MONDO:1012734","xrefs":{"Monarch":{"xref_id":"1012734"}}}


id: PBO:0059946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 32","termid":"PBO:0059946"}


id: GO:0140200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adrenergic receptor signaling pathway that modulates the frequency or rate of heart contraction.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate cyclase-activating adrenergic receptor signaling pathway involved in regulation of heart rate (obsolete GO:0140200)","termid":"GO:0140200"}


id: PBO:0081149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP82 zinc finger protein","termid":"PBO:0081149"}


id: PBO:0073904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 15 member 2","termid":"PBO:0073904"}


id: PBO:0075950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 5 pseudogene","termid":"PBO:0075950"}


id: GO:0033011
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A condensed cytoplasmic structure that covers the nucleus of mammalian spermatozoa except for a narrow zone around the insertion of the tail. It shows two distinct regions, a subacrosomal layer and, continuing caudally beyond the acrosomic system, the postacrosomal sheath. The perinuclear theca has been considered a cytoskeletal scaffold responsible for maintaining the overall architecture of the mature sperm head; however, recent studies indicate that the bulk of its constituent proteins are not traditional cytoskeletal proteins but rather a variety of cytosolic proteins.","definition_xrefs":["PMID:17289678","PMID:8025156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"perinuclear region of cytoplasm","termid":"GO:0048471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"perinuclear theca","termid":"GO:0033011"}


id: PBO:0055405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2835","termid":"PBO:0055405"}


id: GO:0046724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of oxalic acid, ethanedioic acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxalate transport","termid":"GO:0019532"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"oxalic acid secretion","synonyms":[{"name":"oxalate secretion","type":"exact"}],"termid":"GO:0046724"}


id: MONDO:0009764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ocular motor apraxia, Cogan type is characterized by impairment of voluntary horizontal eye movements and compensatory head thrust. Around 50 cases have been described so far. The oculomotor manifestations tend to improve with age but the syndrome may also be associated with learning and speech difficulties, or, in some cases, cerebral malformations. Both sporadic and familial forms have been described, with sporadic forms being more frequent. The mode of transmission of the familial form has not yet been clearly established. A gene located on the long arm of chromosome 2, near to the NPHP1 gene involved in nephronophthisis, may be associated with ocular motor apraxia, Cogan type.","definition_xrefs":["Orphanet:1125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular motor apraxia, Cogan type","secondary_identifiers":["DOID:0080849","NORD:1517","OMIM:257550","MEDGEN:154254","SCTID:405809000","MESH:C537423","GARD:16","UMLS:C0543874"],"synonyms":[{"name":"COMA","type":"related"},{"name":"Cogan syndrome type 2","type":"related"},{"name":"Cogan's syndrome type 2","type":"related"},{"name":"congenital oculomotor apraxia","type":"related"},{"name":"ocular motor apraxia","type":"related"},{"name":"oculomotor apraxia Cogan type","type":"related"},{"name":"oculomotor apraxia, Cogan type","type":"exact"},{"name":"oculomotor apraxia, congenital, Cogan-type","type":"exact"},{"name":"saccade initiation failure congenital","type":"related"},{"name":"saccade initiation failure, congenital","type":"related"}],"termid":"MONDO:0009764","xrefs":{"Monarch":{"xref_id":"0009764"}}}


id: MONDO:0100281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Waldenstrom macroglobulinemia","termid":"MONDO:0100280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0005066"],"is_obsolete":false,"name":"macroglobulinemia, Waldenstrom, 1","secondary_identifiers":["MEDGEN:320546","UMLS:C1835192","OMIM:153600"],"synonyms":[{"name":"WM1","type":"exact"},{"name":"macroglobulinemia, Waldenstrom, somatic","type":"exact"},{"name":"macroglobulinemia, waldenstrom, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0100281","xrefs":{"Monarch":{"xref_id":"0100281"}}}


id: GO:0102735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoyl-CoA + 3 malonyl-CoA + 3 H+ = 2,4,6-trihydroxybenzophenone + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["RHEA:35143","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trihydroxybenzophenone synthase activity","secondary_identifiers":["EC:2.3.1.220","MetaCyc:RXN-7481"],"termid":"GO:0102735"}


id: PBO:0028991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_proline_import","termid":"PBO:0028991"}


id: PBO:0055387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2817","termid":"PBO:0055387"}


id: MONDO:0010693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital nystagmus in which the cause of the disease is a mutation in the FRMD7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus 1, congenital, X-linked","secondary_identifiers":["MEDGEN:333352","MESH:C537853","DOID:0111790","OMIM:310700","UMLS:C1839580"],"synonyms":[{"name":"FRMD7 congenital nystagmus","type":"exact"},{"name":"NYS1","type":"related"},{"name":"NYSTAGMUS 1, congenital, X-linked","type":"related"},{"name":"Nystagmus 1, congenital, X- linked","type":"related"},{"name":"Nystagmus 1, infantile, X-linked","type":"related"},{"name":"Nystagmus, congenital motor, 1","type":"related"},{"name":"Nystagmus, infantile idiopathic","type":"related"},{"name":"Nystagmus, infantile idiopathic, formerly","type":"related"},{"name":"Nystagmus, infantile periodic alternating, X-linked","type":"related"},{"name":"Xlpan","type":"related"},{"name":"congenital nystagmus caused by mutation in FRMD7","type":"exact"},{"name":"nystagmus 1, congenital, X-linked","type":"exact"}],"termid":"MONDO:0010693","xrefs":{"Monarch":{"xref_id":"0010693"}}}


id: PBO:0065707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase 7 like","termid":"PBO:0065707"}


id: SO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An absolute reference to the strand. When a chromosome has p and q arms, the Watson strand is the strand whose 5'-end is on the short arm of the chromosome. Of note, the term 'plus strand' is typically based on a reference sequence where it's preferred for the plus strand to be the Watson strand, but might not be and 'plus strand' is therefore not an exact synonym.","definition_xrefs":["PMID:21303550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Watson_strand","synonyms":[{"name":"Forward strand","type":"exact"},{"name":"Plus strand","type":"broad"},{"name":"Top strand","type":"exact"},{"name":"Watson strand","type":"exact"}],"termid":"SO:0002262"}


id: MONDO:0859247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurocardiofaciodigital syndrome","secondary_identifiers":["UMLS:C5677020","OMIM:619869","MEDGEN:1804193"],"termid":"MONDO:0859247","xrefs":{"Monarch":{"xref_id":"0859247"}}}


id: PBO:0077711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transition protein 1","termid":"PBO:0077711"}


id: FYPO:0003300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation via the N-end rule pathway is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteasomal ubiquitin-dependent protein degradation","termid":"FYPO:0004545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein degradation via N-end rule pathway during vegetative growth","synonyms":[{"name":"decreased protein degradation via N-end rule pathway during mitotic cell cycle","type":"related"},{"name":"decreased ubiquitin-dependent protein breakdown via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein catabolic process via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein catabolism via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein degradation via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"reduced protein degradation via N-end rule pathway during vegetative growth","type":"exact"}],"termid":"FYPO:0003300"}


id: GO:0004430
data:
  {"annotated_genes":["SJAG_01571","SJAG_05330","SJAG_04537"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71542,76315,93024],"is_not":false,"summary":null,"term":"GO:0004430"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol + ATP = a 1-phosphatidyl-1D-myo-inositol 4-phosphate + ADP + H+.","definition_xrefs":["EC:2.7.1.67","RHEA:19877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01571":null,"SJAG_04537":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1675780","Reactome:R-HSA-1675883","Reactome:R-HSA-1675813","Reactome:R-HSA-1675974","KEGG_REACTION:R03361","MetaCyc:1-PHOSPHATIDYLINOSITOL-KINASE-RXN","Reactome:R-HSA-1676185"],"synonyms":[{"name":"PI 4-kinase activity","type":"exact"},{"name":"PI kinase activity","type":"broad"},{"name":"PI4-kinase activity","type":"exact"},{"name":"PI4K","type":"exact"},{"name":"PI4K-alpha activity","type":"exact"},{"name":"PtdIns-4-kinase activity","type":"exact"},{"name":"phosphatidylinositol 4-kinase activity","type":"exact"},{"name":"phosphatidylinositol kinase (phosphorylating) activity","type":"broad"},{"name":"phosphatidylinositol kinase activity","type":"broad"},{"name":"type II phosphatidylinositol kinase activity","type":"related"}],"termid":"GO:0004430","terms_by_termid":{"GO:0004430":null}}


id: PBO:0087478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Ccr4-Not complex that mediates 3' to 5' mRNA deadenylation; exonuclease of the DEDD superfamily","termid":"PBO:0087478"}


id: PBO:0048849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonadotropin releasing hormone 2","termid":"PBO:0048849"}


id: PBO:0042564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 1A","termid":"PBO:0042564"}


id: PBO:0060860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA-related kinase 4 pseudogene 2","termid":"PBO:0060860"}


id: PBO:0110512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase [NAD(P)+] Ssd1","termid":"PBO:0110512"}


id: GO:0012510
data:
  {"annotated_genes":["SJAG_04517","SJAG_02282","SJAG_00379","SJAG_01809","SJAG_04565","SJAG_04609"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112574,62072,77588,112787],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[58626,65332],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle transporting substances between the trans-Golgi network and other parts of the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"Golgi-associated vesicle membrane","termid":"GO:0030660"},{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"part_of","term_name":"trans-Golgi network transport vesicle","termid":"GO:0030140"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01809":null,"SJAG_02282":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"trans-Golgi network transport vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TGN transport vesicle membrane","type":"exact"},{"name":"trans-Golgi network constitutive secretory pathway transport vesicle membrane","type":"exact"}],"termid":"GO:0012510","terms_by_termid":{"GO:0030121":null,"GO:0030130":null}}


id: PBO:0056409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF6 divergent transcript","termid":"PBO:0056409"}


id: MONDO:0013301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aromatase deficiency disrupts the synthesis of estradiol, resulting in hirsutism of mothers during gestation of an affected child; pseudohermaphroditism and virilization in women; and tall stature, osteoporosis and obesity in men.","definition_xrefs":["Orphanet:91"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary 46,XX disorder of sex development (obsolete MONDO:0957024)","termid":"MONDO:0957024"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"aromatase deficiency","secondary_identifiers":["icd11.foundation:260189446","MEDGEN:743307","MESH:C537436","GARD:365","NCIT:C120144","OMIM:613546","UMLS:C1960539"],"synonyms":[{"name":"aromatase deficiency","type":"exact"},{"name":"congenital estrogen deficiency","type":"exact"},{"name":"congenital oestrogen deficiency","type":"exact"},{"name":"pseudohermaphroditism, female, due to placental aromatase deficiency","type":"related"}],"termid":"MONDO:0013301","xrefs":{"Monarch":{"xref_id":"0013301"}}}


id: PBO:0043824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Q","termid":"PBO:0043824"}


id: PBO:0039797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3","termid":"PBO:0039797"}


id: FYPO:0004746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly involved in chromatin silencing at the centromere outer repeat region does not occur.","definition_xrefs":["PMID:24240238","GO:0031507","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly at centromere outer repeat during vegetative growth","termid":"FYPO:0003098"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat","synonyms":[{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere otr","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at pericentric region","type":"related"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at pericentromeric region","type":"related"},{"name":"heterochromatin assembly involved in chromatin silencing at centromere outer repeat abolished","type":"exact"}],"termid":"FYPO:0004746"}


id: FYPO:0003491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ultraviolet light during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to UV during vegetative growth","termid":"FYPO:0000268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to UV during mitotic G1 phase","synonyms":[{"name":"decreased growth during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"hypersensitive to UV during mitotic G1 phase","type":"exact"},{"name":"increased sensitivity to UV irradiation during mitotic G1 phase","type":"exact"},{"name":"sensitive to UV during G1 phase during vegetative growth","type":"exact"},{"name":"sensitive to UV during G1 phase of mitotic cell cycle","type":"exact"},{"name":"sensitive to ultraviolet light during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0003491"}


id: PBO:0069832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1118, pseudogene","termid":"PBO:0069832"}


id: PBO:0082863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm D2; part of heteroheptameric complex (with Smb1p, Smd1p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm D2","termid":"PBO:0082863"}


id: MONDO:0003074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial retinoblastoma (obsolete MONDO:0003074)","termid":"MONDO:0003074","xrefs":{"Monarch":{"xref_id":"0003074"}}}


id: PBO:0053377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 303","termid":"PBO:0053377"}


id: PBO:0063711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGM5 antisense RNA 1","termid":"PBO:0063711"}


id: PBO:0073386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 2, histone lysine methyltransferase","termid":"PBO:0073386"}


id: SO:0000279
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is bound by a protein.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"bound_by_protein","termid":"SO:0000875"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_bound_by_protein","synonyms":[{"name":"transcript bound by protein","type":"exact"}],"termid":"SO:0000279"}


id: MONDO:0013815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial bent bone dysplasia syndrome","termid":"MONDO:0031615"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bent bone dysplasia syndrome 1","secondary_identifiers":["UMLS:C3281247","OMIM:614592","GARD:10965","MEDGEN:482877","Orphanet:313855"],"synonyms":[{"name":"BBDS","type":"related"},{"name":"FGFR2-related bent bone dysplasia","type":"exact"},{"name":"bent bone dysplasia (BBD)-FGFR2 type","type":"related"},{"name":"bent bone dysplasia syndrome","type":"related"},{"name":"perinatal lethal bent bone dysplasia","type":"exact"}],"termid":"MONDO:0013815","xrefs":{"Monarch":{"xref_id":"0013815"}}}


id: PATO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's one part being layered over another connected part.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folded","termid":"PATO:0001910"}


id: PBO:0033759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_exit_from_meiosis","termid":"PBO:0033759"}


id: PBO:0074313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD3 divergent transcript","termid":"PBO:0074313"}


id: PBO:0047766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOSL1 pseudogene 1","termid":"PBO:0047766"}


id: GO:0033051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aminophosphonates, phosphonic acid derivatives that contain an amino group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminophosphonate metabolic process","secondary_identifiers":["KEGG_PATHWAY:map00440"],"synonyms":[{"name":"aminophosphonate metabolism","type":"exact"}],"termid":"GO:0033051"}


id: MONDO:0020800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any condition in which there is degeneration of the myelin sheath that covers the nerves of the central nervous system.","definition_xrefs":["NCIT:C34526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"demyelinating disease of central nervous system","secondary_identifiers":["SCTID:6118003","MEDGEN:3719","UMLS:C0011302","ICD9:341.8","ICD10CM:G35-G37","ICD9:341.9"],"synonyms":[{"name":"demyelinating CNS disease","type":"exact"},{"name":"demyelinating disease central nervous system (CNS)","type":"exact"},{"name":"demyelinating disease of central nervous system","type":"exact"},{"name":"demyelinating disorder of central nervous system","type":"exact"},{"name":"demyelinating disorders of the central nervous system","type":"exact"}],"termid":"MONDO:0020800","xrefs":{"Monarch":{"xref_id":"0020800"}}}


id: PBO:0066798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 97","termid":"PBO:0066798"}


id: PBO:0003649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog8 (predicted)","termid":"PBO:0003649"}


id: MONDO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A congenital defect in the muscles of the abdominal wall that results in the intestines and other abdominal organs developing outside the abdominal wall covered in a sac.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete umbilical hernia (obsolete MONDO:0000747)","secondary_identifiers":["NCIT:C98997","ICD9:756.72","SCTID:396347007","NCIT:C118375","SCTID:18735004","DOID:0060321","MESH:D006554","HP:0001537","ICD9:553.1"],"termid":"MONDO:0000747","xrefs":{"Monarch":{"xref_id":"0000747"}}}


id: MONDO:0800397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the GRM6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"GRM6-related retinopathy","termid":"MONDO:0800397","xrefs":{"Monarch":{"xref_id":"0800397"}}}


id: GO:0007178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses serine/threonine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell surface receptor protein serine/threonine kinase signaling pathway","synonyms":[{"name":"transmembrane receptor protein serine/threonine kinase signaling pathway","type":"broad"},{"name":"transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0007178"}


id: GO:0002525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An acute inflammatory response to non-antigenic stimuli such as heat or physical trauma.","definition_xrefs":["PMID:9073326","PMID:16459497","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acute inflammatory response to non-antigenic stimulus","termid":"GO:0002525"}


id: PBO:0077233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 1","termid":"PBO:0077233"}


id: GO:2000710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034095"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:2000709"},{"relation_name":"negatively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of maintenance of meiotic sister chromatid cohesion, centromeric","synonyms":[{"name":"negative regulation of maintenance of centromeric meiotic sister chromatin cohesion","type":"exact"},{"name":"negative regulation of maintenance of meiotic sister chromatin cohesion at centromere","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion at centromere at meiosis I","type":"exact"}],"termid":"GO:2000710"}


id: PBO:0053582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 605","termid":"PBO:0053582"}


id: PATO:0002060
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The specific wavelength of radiation that can be retained by a bearer.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"absorption quality","termid":"PATO:0001293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absorption wavelength","termid":"PATO:0002060"}


id: PBO:0079120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific 10","termid":"PBO:0079120"}


id: PBO:0011966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal calcium sensor related protein Ncs1","termid":"PBO:0011966"}


id: GO:0075324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of oomycete sporangium development, a process that leads to the formation of oomycete sporangium, a single-celled or many-celled structure that germinates directly to form an infection hypha or differentiate, through specialized cleavage vesicles, into between 10 and 30 zoospores, which is laterally flagellated.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporulation","termid":"GO:0043939"},{"relation_name":"is_a","term_name":"negative regulation of sporangium development","termid":"GO:0075312"},{"relation_name":"is_a","term_name":"regulation of oomycete sporangium development","termid":"GO:0075322"},{"relation_name":"is_a","term_name":"negative regulation of asexual reproduction","termid":"GO:1903665"},{"relation_name":"negatively_regulates","term_name":"oomycete sporangium development","termid":"GO:0075321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oomycete sporangium development","termid":"GO:0075324"}


id: GO:1990343
data:
  {"annotated_genes":["SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[119270],"is_not":false,"summary":null,"term":"GO:1990343"}]},"cv_name":"cellular_component","definition":"A region of heterochromatin that is formed dynamically under specific growth conditions by a process that requires RNAi, and is enriched in histone H3 methylated on lysine 9 (H3K9me).","definition_xrefs":["PMID:23151475","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"heterochromatin domain","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"HOOD","type":"exact"}],"termid":"GO:1990343","terms_by_termid":{"GO:1990343":null}}


id: PBO:0069752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1035, pseudogene","termid":"PBO:0069752"}


id: MONDO:0700155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adeonocarcinoma of the thyroid gland occurring in a dog.","definition_xrefs":["NCIT:C132275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma, non-human animal","termid":"MONDO:0700099"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine thyroid adenocarcinoma","termid":"MONDO:0700155","xrefs":{"Monarch":{"xref_id":"0700155"}}}


id: PBO:0081930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger NFX1-type containing 1","termid":"PBO:0081930"}


id: MONDO:0004161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of uterine corpus leiomyoma characterized by zones of hemorrhagic infarction surrounded by hypercellular areas. It usually develops in women of childbearing years, particularly those that are pregnant, post-partum, or taking oral contraceptives.","definition_xrefs":["NCIT:C40165"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine corpus cellular leiomyoma","termid":"MONDO:0004162"},{"relation_name":"is_a","term_name":"uterine corpus leiomyoma","termid":"MONDO:0007886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus apoplectic leiomyoma","secondary_identifiers":["DOID:7241","MEDGEN:274364","UMLS:C1519852"],"synonyms":[{"name":"uterine corpus hemorrhagic cellular leiomyoma","type":"exact"},{"name":"uterine corpus leiomyoma with apoplectic change","type":"exact"}],"termid":"MONDO:0004161","xrefs":{"Monarch":{"xref_id":"0004161"}}}


id: PBO:0090069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall beta-glucosidase Psu1","termid":"PBO:0090069"}


id: GO:0070836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a caveola. A caveola is a plasma membrane raft that forms a small pit, depression, or invagination that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:12633858","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane raft assembly","termid":"GO:0044854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"caveola assembly","synonyms":[{"name":"caveola formation","type":"exact"},{"name":"caveolar biogenesis","type":"related"}],"termid":"GO:0070836"}


id: GO:0046119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 7-methylguanosine, a modified nucleoside that forms a cap at the 5'-terminus of eukaryotic mRNA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"7-methylguanosine metabolic process","termid":"GO:0008618"},{"relation_name":"is_a","term_name":"guanosine-containing compound catabolic process","termid":"GO:1901069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"7-methylguanosine catabolic process","synonyms":[{"name":"7-methylguanosine breakdown","type":"exact"},{"name":"7-methylguanosine catabolism","type":"exact"},{"name":"7-methylguanosine degradation","type":"exact"}],"termid":"GO:0046119"}


id: CHEBI:31823
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A mercury coordination entity made up of linear triatomic molecules in which a mercury atom is bonded to two chlorines","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercury dichloride","termid":"CHEBI:31823"}


id: PBO:0052926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-9, pseudogene","termid":"PBO:0052926"}


id: GO:0005396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane conductance regulator activity (obsolete GO:0005396)","synonyms":[{"name":"transmembrane conductance regulator activity","type":"exact"}],"termid":"GO:0005396"}


id: GO:1904345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gastric mucosal blood circulation.","definition_xrefs":["GO_REF:0000058","PMID:10807413","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood circulation","termid":"GO:1903523"},{"relation_name":"is_a","term_name":"regulation of gastric mucosal blood circulation","termid":"GO:1904344"},{"relation_name":"negatively_regulates","term_name":"gastric mucosal blood circulation","termid":"GO:1990768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of gastric mucosal blood circulation","synonyms":[{"name":"down regulation of gastric mucosal blood circulation","type":"exact"},{"name":"down regulation of stomach mucosal blood circulation","type":"exact"},{"name":"down-regulation of gastric mucosal blood circulation","type":"exact"},{"name":"down-regulation of stomach mucosal blood circulation","type":"exact"},{"name":"downregulation of gastric mucosal blood circulation","type":"exact"},{"name":"downregulation of stomach mucosal blood circulation","type":"exact"},{"name":"inhibition of gastric mucosal blood circulation","type":"narrow"},{"name":"inhibition of stomach mucosal blood circulation","type":"narrow"},{"name":"negative regulation of stomach mucosal blood circulation","type":"exact"}],"termid":"GO:1904345"}


id: PATO:0001401
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to form multiple differentiated cell types of a specific lineage and lack self renewing capacity.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligopotent","termid":"PATO:0001401"}


id: PBO:0042721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein A","termid":"PBO:0042721"}


id: PBO:0036349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"23S rRNA (adenine(1618)-N(6))-methyltransferase","termid":"PBO:0036349"}


id: PATO:0000517
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000517 abiotic stress sensitivity value (obsolete PATO:0000517)","termid":"PATO:0000517"}


id: PBO:0067675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 860, pseudogene","termid":"PBO:0067675"}


id: GO:0060319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Erythrocyte differentiation which occurs as part of the process of primitive hemopoiesis.","definition_xrefs":["GOC:BHF","GOC:add","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte differentiation","termid":"GO:0030218"},{"relation_name":"part_of","term_name":"primitive hemopoiesis","termid":"GO:0060215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive erythrocyte differentiation","synonyms":[{"name":"primitive RBC differentiation","type":"exact"},{"name":"primitive erythropoiesis","type":"exact"},{"name":"primitive red blood cell differentiation","type":"exact"}],"termid":"GO:0060319"}


id: PBO:0043955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta-gamma domain containing 3","termid":"PBO:0043955"}


id: PBO:0062829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncostatin M receptor","termid":"PBO:0062829"}


id: GO:1901320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of heart induction.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of heart induction","termid":"GO:0090381"},{"relation_name":"negatively_regulates","term_name":"heart induction","termid":"GO:0003129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart induction","synonyms":[{"name":"down regulation of heart induction","type":"exact"},{"name":"down-regulation of heart induction","type":"exact"},{"name":"downregulation of heart induction","type":"exact"},{"name":"inhibition of heart induction","type":"narrow"}],"termid":"GO:1901320"}


id: PBO:0035810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0035810"}


id: GO:0050763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of depsipeptides, a linear or cyclic compound composed of both amino acids and hydroxy acids in peptide and ester bonds respectively.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"depsipeptide metabolic process","termid":"GO:0050761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"depsipeptide biosynthetic process","synonyms":[{"name":"depsipeptide anabolism","type":"exact"},{"name":"depsipeptide biosynthesis","type":"exact"},{"name":"depsipeptide formation","type":"exact"},{"name":"depsipeptide synthesis","type":"exact"}],"termid":"GO:0050763"}


id: GO:0046537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate; this reaction does not require the cofactor 2,3-bisphosphoglycerate.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity (obsolete GO:0046537)","termid":"GO:0046537"}


id: PBO:0058584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6717","termid":"PBO:0058584"}


id: GO:0044185
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell late endosome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endosome membrane","termid":"GO:0044175"},{"relation_name":"part_of","term_name":"host cell late endosome","termid":"GO:0044184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell late endosome membrane","termid":"GO:0044185"}


id: GO:0002111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex of BRCA2 and BRAF35 (BRCA2-associated factor 35). The BRCA2-BRAF35 complex is often associated with condensed chromatin during mitosis.","definition_xrefs":["GOC:hjd","PMID:11207365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"BRCA2-BRAF35 complex","termid":"GO:0002111"}


id: PBO:0075549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm flagellar 1","termid":"PBO:0075549"}


id: PBO:0087722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA transcriptional regulatory complex; involved in maintaining the integrity of the complex; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay","termid":"PBO:0087722"}


id: MONDO:0019278
data:
  {"annotated_genes":["SJAG_00155","SJAG_01202","SJAG_03469","SJAG_02536","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014027"},{"annotations":[86241,86240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014384"},{"annotations":[85312,85313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"},{"relation_name":"is_a","term_name":"skin appendage disorder","termid":"MONDO:0024481"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00155":null,"SJAG_01202":null,"SJAG_02536":null,"SJAG_03126":null,"SJAG_03469":null},"genotype_count":0,"is_obsolete":false,"name":"hair anomaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0265991","Orphanet:79363","MEDGEN:539624"],"termid":"MONDO:0019278","terms_by_termid":{"MONDO:0014027":null,"MONDO:0014384":null,"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0019278"}}}


id: MONDO:0008015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sensation of discomfort that results from a discordant relationship between visualized movement and any movement sensed by the vestibular system, which is characterized by dizziness, nausea, and vomiting.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"},{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motion sickness","secondary_identifiers":["UMLS:C0026603","ICD9:994.6","MESH:D009041","DOID:2951","icd11.foundation:1078108554","ICD10CM:T75.3","OMIM:158280","MEDGEN:44503"],"synonyms":[{"name":"motion sickness","type":"exact"},{"name":"travel sickness","type":"exact"}],"termid":"MONDO:0008015","xrefs":{"Monarch":{"xref_id":"0008015"}}}


id: PBO:0054996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2411","termid":"PBO:0054996"}


id: GO:0008650
data:
  {"annotated_genes":["SJAG_03332","SJAG_00722","SJAG_03773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75445,75713,78434],"is_not":false,"summary":null,"term":"GO:0008650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in rRNA + S-adenosyl-L-methionine = a 2'-O-methyluridine in rRNA + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:54152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (uridine) methyltransferase activity","termid":"GO:0016436"},{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_03332":null,"SJAG_03773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140098","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"rRNA (uridine-2'-O-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6793127"],"termid":"GO:0008650","terms_by_termid":{"GO:0008650":null}}


id: PBO:0039598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member A pseudogene 1","termid":"PBO:0039598"}


id: SO:0001356
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Uridine_5_oxyacetic_acid is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine_five_oxyacetic_acid","secondary_identifiers":["RNAMOD:064"],"synonyms":[{"name":"cmo5U","type":"exact"},{"name":"uridine 5-oxyacetic acid","type":"exact"},{"name":"uridine five oxyacetic acid","type":"exact"}],"termid":"SO:0001356"}


id: GO:0075182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of its transcription as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of symbiont transcription in response to host (obsolete GO:0075182)","termid":"GO:0075182"}


id: PBO:0050058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, Y (pseudogene)","termid":"PBO:0050058"}


id: PBO:0042326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD46 molecule pseudogene 1","termid":"PBO:0042326"}


id: PBO:0090499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndc80 complex subunit Ndc80","termid":"PBO:0090499"}


id: PBO:0057858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3169","termid":"PBO:0057858"}


id: PBO:0081698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 620","termid":"PBO:0081698"}


id: PBO:0041238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 100","termid":"PBO:0041238"}


id: FYPO:0002243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of acid phosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal acid phosphatase activity","termid":"FYPO:0001044"},{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased acid phosphatase activity","termid":"FYPO:0002243"}


id: GO:0030728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:bf","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovulation","secondary_identifiers":["Wikipedia:Ovulation"],"termid":"GO:0030728"}


id: GO:0047627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'-adenylyl sulfate + H2O = AMP + 2 H+ + sulfate.","definition_xrefs":["RHEA:17041","EC:3.6.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides","termid":"GO:0016819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"adenylylsulfatase activity","secondary_identifiers":["KEGG_REACTION:R00531","MetaCyc:ADENYLYLSULFATASE-RXN"],"synonyms":[{"name":"adenosine 5-phosphosulfate sulfohydrolase activity","type":"related"},{"name":"adenylylsulfate sulfohydrolase activity","type":"related"},{"name":"adenylylsulphatase activity","type":"exact"}],"termid":"GO:0047627"}


id: PBO:0110286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caprin, Cpn1","termid":"PBO:0110286"}


id: SO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant occurring within an intron of a coding transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_variant","termid":"SO:0001627"},{"relation_name":"is_a","term_name":"coding_transcript_variant","termid":"SO:0001968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_transcript_intron_variant","synonyms":[{"name":"Jannovar:coding_transcript_intron_variant","type":"exact"},{"name":"coding sequence intron variant","type":"exact"}],"termid":"SO:0001969"}


id: GO:1903542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of exosomal secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24105262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of exosomal secretion","termid":"GO:1903541"},{"relation_name":"negatively_regulates","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of exosomal secretion","synonyms":[{"name":"down regulation of exosomal protein secretion","type":"narrow"},{"name":"down regulation of exosomal secretion","type":"exact"},{"name":"down regulation of exosomal secretory pathway","type":"exact"},{"name":"down regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"down regulation of secretion of exosome","type":"exact"},{"name":"down-regulation of exosomal protein secretion","type":"narrow"},{"name":"down-regulation of exosomal secretion","type":"exact"},{"name":"down-regulation of exosomal secretory pathway","type":"exact"},{"name":"down-regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"down-regulation of secretion of exosome","type":"exact"},{"name":"downregulation of exosomal protein secretion","type":"narrow"},{"name":"downregulation of exosomal secretion","type":"exact"},{"name":"downregulation of exosomal secretory pathway","type":"exact"},{"name":"downregulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"downregulation of secretion of exosome","type":"exact"},{"name":"inhibition of exosomal protein secretion","type":"narrow"},{"name":"inhibition of exosomal secretion","type":"narrow"},{"name":"inhibition of exosomal secretory pathway","type":"narrow"},{"name":"inhibition of extracellular vesicular exosome secretion","type":"narrow"},{"name":"inhibition of secretion of exosome","type":"narrow"},{"name":"negative regulation of exosomal protein secretion","type":"narrow"},{"name":"negative regulation of exosomal secretory pathway","type":"exact"},{"name":"negative regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"negative regulation of secretion of exosome","type":"exact"}],"termid":"GO:1903542"}


id: GO:0080040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to phosphate starvation.","definition_xrefs":["PMID:18315545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cellular response to phosphate starvation","termid":"GO:0140255"},{"relation_name":"positively_regulates","term_name":"cellular response to phosphate starvation","termid":"GO:0016036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to phosphate starvation","termid":"GO:0080040"}


id: MONDO:0700202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bunyaviridae infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bunyaviridae infectious disease, non-human animal","termid":"MONDO:0700202","xrefs":{"Monarch":{"xref_id":"0700202"}}}


id: GO:1904990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adenylate cyclase-inhibiting dopamine receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:kmv","PMID:26554819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine receptor signaling pathway","termid":"GO:0060159"},{"relation_name":"regulates","term_name":"adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:0007195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","synonyms":[{"name":"regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:1904990"}


id: PR:P36594
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02936","PANTHER:PTHR19376:SF14","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.12","secondary_identifiers":["UniProtKB:P36594"],"synonyms":[{"name":"DNA-directed RNA polymerase III largest subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2A","type":"exact"}],"termid":"PR:P36594"}


id: PBO:0042638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 13 pseudogene","termid":"PBO:0042638"}


id: PBO:0090002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L13","termid":"PBO:0090002"}


id: PBO:0064587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member G","termid":"PBO:0064587"}


id: PBO:0031827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_modification","termid":"PBO:0031827"}


id: PBO:0059609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 21","termid":"PBO:0059609"}


id: GO:0009242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of colanic acid, a capsular bacterial polysaccharide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"colanic acid metabolic process","termid":"GO:0046377"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colanic acid biosynthetic process","secondary_identifiers":["MetaCyc:COLANSYN-PWY"],"synonyms":[{"name":"M antigen biosynthesis","type":"exact"},{"name":"M antigen biosynthetic process","type":"exact"},{"name":"colanic acid anabolism","type":"exact"},{"name":"colanic acid biosynthesis","type":"exact"},{"name":"colanic acid formation","type":"exact"},{"name":"colanic acid synthesis","type":"exact"}],"termid":"GO:0009242"}


id: GO:0070118
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer membrane of any thylakoid within an organellar chromatophore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid membrane","termid":"GO:0042651"},{"relation_name":"is_a","term_name":"organellar chromatophore membrane","termid":"GO:0070112"},{"relation_name":"part_of","term_name":"organellar chromatophore thylakoid","termid":"GO:0070116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"organellar chromatophore thylakoid membrane","synonyms":[{"name":"Paulinella-type chromatophore thylakoid membrane","type":"exact"}],"termid":"GO:0070118"}


id: GO:0070745
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-12 alpha subunit (p35, product of the IL12A gene) and an EBI3 subunit and is secreted into the extracellular space.","definition_xrefs":["GOC:add","PMID:19161428","PMID:19161429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"interleukin-35 complex","synonyms":[{"name":"EBI3","type":"narrow"},{"name":"IL-35 complex","type":"exact"},{"name":"IL12A","type":"narrow"},{"name":"p35","type":"narrow"}],"termid":"GO:0070745"}


id: MONDO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection caused by Brucella abortus that spreads from cattle to humans. Brucella abortus can cause of range of signs and symptoms including fever, chills, sweats, weight loss, malaise, headaches, myalgia, and arthralgia.","definition_xrefs":["DOID:14457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brucellosis","termid":"MONDO:0005683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brucella abortus brucellosis","secondary_identifiers":["ICD9:023.1","MESH:D002007","SCTID:427795000","UMLS:C0302363","MEDGEN:81294"],"termid":"MONDO:0001973","xrefs":{"Monarch":{"xref_id":"0001973"}}}


id: PBO:0056119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYRM4 antisense RNA 1","termid":"PBO:0056119"}


id: GO:0031554
data:
  {"annotated_genes":["SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, extent, or location of DNA-templated transcription termination, the process in which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA.","definition_xrefs":["GOC:txnOH","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"is_a","term_name":"regulation of RNA biosynthetic process","termid":"GO:2001141"},{"relation_name":"regulates","term_name":"DNA-templated transcription termination","termid":"GO:0006353"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of termination of DNA-templated transcription","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA-dependent transcription, termination","type":"exact"},{"name":"regulation of DNA-templated transcription, termination","type":"exact"},{"name":"regulation of transcription termination, DNA-dependent","type":"exact"},{"name":"transcription antiterminator activity","type":"related"}],"termid":"GO:0031554","terms_by_termid":{"GO:1904595":null}}


id: GO:0046692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to the success of sperm fertilization in multiply-mated females.","definition_xrefs":["PMID:10885514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-organism reproductive process","termid":"GO:0044703"},{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"insemination","termid":"GO:0007320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm competition","secondary_identifiers":["Wikipedia:Sperm_competition"],"termid":"GO:0046692"}


id: GO:0022006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the narrow stripe of cells that lies between the prospective dorsal and ventral thalami. This boundary contains signals that pattern the prethalamic and thalamic territories of the future mid-diencephalon.","definition_xrefs":["GOC:jid","GOC:dph","PMID:11425897","PMID:16452095","GOC:dgh","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"rostrocaudal neural tube patterning","termid":"GO:0021903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zona limitans intrathalamica formation","synonyms":[{"name":"zli biosynthesis","type":"exact"},{"name":"zli formation","type":"exact"}],"termid":"GO:0022006"}


id: PBO:0054882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2296","termid":"PBO:0054882"}


id: MONDO:1010523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in spectacled flying fox.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, spectacled flying fox","secondary_identifiers":["OMIA:000197-328804"],"termid":"MONDO:1010523","xrefs":{"Monarch":{"xref_id":"1010523"}}}


id: PBO:0046560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 2","termid":"PBO:0046560"}


id: PBO:0034694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biological_role_inferred","termid":"PBO:0034694"}


id: PR:O13621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anoctamin-10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C691.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC691.05c","secondary_identifiers":["UniProtKB:O13621"],"synonyms":[{"name":"Spom972h-ANO10","type":"exact"}],"termid":"PR:O13621"}


id: PBO:0005893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Histidine, mitochondrial","termid":"PBO:0005893"}


id: PBO:0029772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spore_shape","termid":"PBO:0029772"}


id: MONDO:0008312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malocclusion in which the mandible is anterior to the maxilla as reflected by the first relationship of the first permanent molar (mesioclusion).","definition_xrefs":["MESH:D008313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant prognathism","secondary_identifiers":["OMIM:176700","Orphanet:2964","GARD:10319","UMLS:C0399526","MEDGEN:98316"],"synonyms":[{"name":"'Habsburg jaw'","type":"related"},{"name":"'Hapsburg jaw'","type":"related"},{"name":"Habsburg jaw","type":"related"},{"name":"Hapsburg jaw","type":"related"},{"name":"prognathism mandibular","type":"related"},{"name":"prognathism, mandibular","type":"related"}],"termid":"MONDO:0008312","xrefs":{"Monarch":{"xref_id":"0008312"}}}


id: PBO:0090962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Sls1","termid":"PBO:0090962"}


id: PBO:0065089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-activated catalytic subunit beta","termid":"PBO:0065089"}


id: PBO:0080457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2B","termid":"PBO:0080457"}


id: GO:2000139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of octopamine signaling pathway involved in response to food.","definition_xrefs":["GOC:mah","PMID:19609300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway","termid":"GO:2000128"},{"relation_name":"regulates","term_name":"octopamine signaling pathway involved in response to food","termid":"GO:0071935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of octopamine signaling pathway involved in response to food","synonyms":[{"name":"regulation of octopamine signalling pathway involved in response to food","type":"exact"}],"termid":"GO:2000139"}


id: PBO:0090527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit, RNA-binding Cwf5","termid":"PBO:0090527"}


id: GO:0019095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which mitochondrial ribosomal RNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pole plasm RNA localization","termid":"GO:0007316"},{"relation_name":"is_a","term_name":"mitochondrial RNA localization","termid":"GO:0019093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pole plasm mitochondrial rRNA localization","secondary_identifiers":["GO:0048117"],"synonyms":[{"name":"establishment and maintenance of mitochondrial rRNA localization in pole plasm","type":"exact"},{"name":"oocyte pole plasm mitochondrial rRNA localization","type":"exact"},{"name":"pole plasm mitochondrial rRNA localisation","type":"exact"}],"termid":"GO:0019095"}


id: GO:0005540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hyaluronic acid binding","synonyms":[{"name":"hyaluronan binding","type":"exact"}],"termid":"GO:0005540"}


id: PBO:0050224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 2","termid":"PBO:0050224"}


id: PR:P0CT75
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps23 gene.","definition_xrefs":["UniProtKB:P0CT75","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.02c","synonyms":[{"name":"Spom972h-rps23","type":"exact"}],"termid":"PR:P0CT75"}


id: FYPO:0000871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"},{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9me during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000871"}


id: GO:0012509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle transporting substances within the Golgi.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"COPI-coated vesicle membrane","termid":"GO:0030663"},{"relation_name":"part_of","term_name":"COPI-coated inter-Golgi transport vesicle","termid":"GO:0030143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"inter-Golgi transport vesicle membrane","synonyms":[{"name":"inter-Golgi transport constitutive secretory pathway transport vesicle membrane","type":"exact"}],"termid":"GO:0012509"}


id: GO:0009604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a symbiotic bacterium, a bacterium living in close physical association with another organism, is received and converted into a molecular signal.","definition_xrefs":["GOC:hb","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of symbiont","termid":"GO:0009602"},{"relation_name":"is_a","term_name":"response to symbiotic bacterium","termid":"GO:0009609"},{"relation_name":"is_a","term_name":"detection of bacterium","termid":"GO:0016045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of symbiotic bacterium","synonyms":[{"name":"detection of symbiotic bacteria","type":"exact"},{"name":"perception of symbiotic bacteria","type":"related"},{"name":"perception of symbiotic bacterium","type":"related"}],"termid":"GO:0009604"}


id: GO:0097670
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Ufo1 in S. cerevisiae (Pof10 in S. pombe).","definition_xrefs":["GOC:vw","PMID:14747994","PMID:15147268","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Ufo1/Pof10 ubiquitin ligase complex","termid":"GO:0097670"}


id: PBO:0072175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 2","termid":"PBO:0072175"}


id: GO:0007515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of the lymph gland over time, from its formation to the mature structure. The lymph gland is a small bean-shaped organ made up of a loose meshwork of reticular tissue in which are enmeshed large numbers of lymphocytes, macrophages and accessory cells. Lymph glands are located along the lymphatic system.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete lymph gland development (obsolete GO:0007515)","synonyms":[{"name":"lymph gland development","type":"exact"}],"termid":"GO:0007515"}


id: PBO:0038317
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"authors","termid":"PBO:0038317"}


id: PBO:0043016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule L1 like","termid":"PBO:0043016"}


id: PBO:0044087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A7","termid":"PBO:0044087"}


id: GO:0140670
data:
  {"annotated_genes":["SJAG_02606","SJAG_04508"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87662,110348],"is_not":false,"summary":null,"term":"GO:0140670"}]},"cv_name":"molecular_function","definition":"Facilitating a conformational change to unload a cohesin complex from sister chromatids.","definition_xrefs":["PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02606":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"cohesin unloader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cohesin unloading activity","type":"exact"}],"termid":"GO:0140670","terms_by_termid":{"GO:0140670":null}}


id: GO:0097177
data:
  {"annotated_genes":["SJAG_01517","SJAG_04351","SJAG_00887","SJAG_02856","SJAG_01249","SJAG_04635"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71851,98508,100261,102428,105390,107076],"is_not":false,"summary":null,"term":"GO:0097177"}]},"cv_name":"molecular_function","definition":"Binding to a mitochondrial ribosome.","definition_xrefs":["GOC:ans","PMID:20739282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome binding","termid":"GO:0043022"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00887":null,"SJAG_01249":null,"SJAG_01517":null,"SJAG_02856":null,"SJAG_04351":null,"SJAG_04635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mitochondrial ribosome binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0097177","terms_by_termid":{"GO:0097177":null}}


id: FYPO:0007138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, has an abnormally low volume, and contains more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000004","FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000032","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"inviable small multiseptate vegetative cell","synonyms":[{"name":"inviable small multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; small multiseptate vegetative cell","type":"exact"},{"name":"small inviable multiseptate cell during vegetative growth","type":"exact"},{"name":"small multiseptate inviable vegetative cell","type":"exact"}],"termid":"FYPO:0007138"}


id: PBO:0061555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5',3'-nucleotidase, cytosolic pseudogene 2","termid":"PBO:0061555"}


id: PBO:0029504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_elongated_germ_tubes_(obsolete_FYPO:0002211)","termid":"PBO:0029504"}


id: GO:0050422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha(S)-strictosidine + H2O = D-glucose + strictosidine aglycone.","definition_xrefs":["RHEA:12917","EC:3.2.1.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"strictosidine beta-glucosidase activity","secondary_identifiers":["MetaCyc:STRICTOSIDINE-BETA-GLUCOSIDASE-RXN","KEGG_REACTION:R03820"],"synonyms":[{"name":"strictosidine b-glucosidase activity","type":"exact"},{"name":"strictosidine beta-D-glucohydrolase activity","type":"related"}],"termid":"GO:0050422"}


id: GO:0047914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histamine + L-glutamate + ATP = N(alpha)-gamma-L-glutamylhistamine + products of ATP breakdown.","definition_xrefs":["MetaCyc:GAMMA-GLUTAMYLHISTAMINE-SYNTHASE-RXN","EC:6.3.2.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"gamma-glutamylhistamine synthase activity","secondary_identifiers":["RHEA:18881"],"synonyms":[{"name":"L-glutamate:histamine ligase activity","type":"related"},{"name":"g-glutamylhistamine synthase activity","type":"exact"},{"name":"gamma-GHA synthetase activity","type":"related"},{"name":"gamma-glutaminylhistamine synthetase activity","type":"related"}],"termid":"GO:0047914"}


id: GO:1902804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle transport.","definition_xrefs":["GO_REF:0000058","PMID:23527112","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle transport","termid":"GO:0048489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle transport","synonyms":[{"name":"down regulation of synaptic vesicle fission","type":"related"},{"name":"down regulation of synaptic vesicle fusion","type":"related"},{"name":"down regulation of synaptic vesicle transport","type":"exact"},{"name":"down-regulation of synaptic vesicle fission","type":"related"},{"name":"down-regulation of synaptic vesicle fusion","type":"related"},{"name":"down-regulation of synaptic vesicle transport","type":"exact"},{"name":"downregulation of synaptic vesicle fission","type":"related"},{"name":"downregulation of synaptic vesicle fusion","type":"related"},{"name":"downregulation of synaptic vesicle transport","type":"exact"},{"name":"inhibition of synaptic vesicle fission","type":"related"},{"name":"inhibition of synaptic vesicle fusion","type":"related"},{"name":"inhibition of synaptic vesicle transport","type":"narrow"},{"name":"negative regulation of synaptic vesicle fission","type":"related"},{"name":"negative regulation of synaptic vesicle fusion","type":"related"}],"termid":"GO:1902804"}


id: MONDO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"posterior scleritis","secondary_identifiers":["UMLS:C0155357","ICD9:379.07","icd11.foundation:982348440","SCTID:267660007","MEDGEN:509932","DOID:13676"],"termid":"MONDO:0001774","xrefs":{"Monarch":{"xref_id":"0001774"}}}


id: PBO:0071672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 4","termid":"PBO:0071672"}


id: GO:0009479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome c that is characteristic of green plants and transfers electrons to plastocyanin.","definition_xrefs":["PMID:1655423"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome f (obsolete GO:0009479)","synonyms":[{"name":"cytochrome f","type":"exact"}],"termid":"GO:0009479"}


id: MONDO:0034846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare intestinal disease characterized by congenital partial or complete lack of the collagen mesh network in the intestinal wall, resulting in hypoperistalsis or aperistalsis. The enteric nervous system is normal or near-normal in the affected areas, although hypo- and dysganglionosis may be found in some proximal segments of the colon and/or small bowel. Patients present with chronic intractable slow transit constipation.","definition_xrefs":["Orphanet:565641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"primary desmosis coli","secondary_identifiers":["MEDGEN:1812159","GARD:22268","UMLS:C5680125"],"termid":"MONDO:0034846","xrefs":{"Monarch":{"xref_id":"0034846"}}}


id: PR:Q9P778
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1711.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl-peptidase 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.12","synonyms":[{"name":"DPP V (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DppV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC1711.12","type":"exact"},{"name":"dipeptidyl-peptidase V (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P778"}


id: GO:1901559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ribavirin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ribavirin","termid":"GO:1901559"}


id: PBO:0079792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A13, pseudogene","termid":"PBO:0079792"}


id: GO:0048201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles formed at the plasma membrane are directed to specific destinations in endosome membranes, mediated by molecules at the vesicle membrane and target membrane surfaces.","definition_xrefs":["GOC:jid","GOC:mah","PMID:10219233","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"vesicle targeting, plasma membrane to endosome","synonyms":[{"name":"plasma membrane to endosome targeting","type":"exact"}],"termid":"GO:0048201"}


id: PBO:0066484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFPL1 antisense RNA 1","termid":"PBO:0066484"}


id: GO:0033555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a multicellular organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal response to stress","termid":"GO:0033555"}


id: GO:0009770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Energized reaction-center P700 chlorophylls on photosystem I donate an electron to a loosely bound Quinone acceptor molecule X, on the stromal surface of the thylakoid membrane. The result is charge separation; a negative charge on the stromal side of the thylakoid membrane and a positive charge on the luminal side.","definition_xrefs":["GOC:jid","ISBN:0716731363","ISBN:0816017360"],"gene_count":0,"genotype_count":0,"name":"obsolete primary charge separation in photosystem I (obsolete GO:0009770)","termid":"GO:0009770"}


id: PBO:0113077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-dependent kinase; has ten cyclin partners; involved in regulating the cellular response to nutrient levels, environmental conditions and progression through the cell cycle; involved in the hyperphosphorylation of Srl3p (Whi7p), regulating protein stability, mRNA levels and promotion of START; human lissencephaly-associated homolog CDK5 functionally complements null mutation","termid":"PBO:0113077"}


id: PBO:0081374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 213","termid":"PBO:0081374"}


id: GO:0050768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of neurogenesis","termid":"GO:0050767"},{"relation_name":"is_a","term_name":"negative regulation of nervous system development","termid":"GO:0051961"},{"relation_name":"negatively_regulates","term_name":"neurogenesis","termid":"GO:0022008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neurogenesis","synonyms":[{"name":"down regulation of neurogenesis","type":"exact"},{"name":"down-regulation of neurogenesis","type":"exact"},{"name":"downregulation of neurogenesis","type":"exact"},{"name":"inhibition of neurogenesis","type":"narrow"}],"termid":"GO:0050768"}


id: PBO:0079753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UCKL1 antisense RNA 1","termid":"PBO:0079753"}


id: FYPO:0004544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of heterochromatin maintenance is longer than normal. Heterochromatin maintenance is the process that preserves heterochromatin in a stable functional or structural state.","definition_xrefs":["PomBase:mah","GO:0070829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of heterochromatin maintenance","synonyms":[{"name":"increased duration of heterochromatin maintenance during mitotic cell cycle","type":"related"},{"name":"increased duration of heterochromatin maintenance during vegetative growth","type":"exact"},{"name":"prolonged heterochromatin maintenance","type":"exact"}],"termid":"FYPO:0004544"}


id: PBO:0039929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 34, pseudogene","termid":"PBO:0039929"}


id: PBO:0065494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 3","termid":"PBO:0065494"}


id: GO:0052725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4-trisphosphate + ATP = 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ADP + H+.","definition_xrefs":["RHEA:20940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol-1,3,4-trisphosphate 6-kinase activity","secondary_identifiers":["Reactome:R-HSA-1855197","KEGG_REACTION:R03429","Reactome:R-HSA-2267372","MetaCyc:2.7.1.133-RXN"],"synonyms":[{"name":"1D-myo-inositol-trisphosphate 6-kinase activity","type":"broad"},{"name":"IP3 6-kinase activity","type":"broad"},{"name":"Ins(1,3,4)P3 6-kinase activity","type":"related"},{"name":"inositol 1,3,4-trisphosphate 6-kinase activity","type":"exact"},{"name":"inositol-trisphosphate 6-kinase activity","type":"broad"},{"name":"ins(1,3,4)P(3) 6-kinase activity","type":"related"}],"termid":"GO:0052725"}


id: PBO:0089495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L24","termid":"PBO:0089495"}


id: PBO:0050579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 3B1","termid":"PBO:0050579"}


id: PBO:0114384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulfite transmembrane transporter Ssu1","termid":"PBO:0114384"}


id: PBO:0086850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme; regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology, premeiotic replication, and sporulation","termid":"PBO:0086850"}


id: GO:0031720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a haptoglobin, any alpha2 globulin of blood plasma that can combine with free oxyhemoglobin to form a stable complex.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"haptoglobin binding","termid":"GO:0031720"}


id: GO:0000299
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes.","definition_xrefs":["PMID:10512869"],"gene_count":0,"genotype_count":0,"name":"obsolete integral to membrane of membrane fraction (obsolete GO:0000299)","synonyms":[{"name":"integral to membrane of membrane fraction","type":"exact"}],"termid":"GO:0000299"}


id: PBO:0074370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smith-Magenis syndrome chromosome region, candidate 5","termid":"PBO:0074370"}


id: MONDO:0003682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-disseminated skeletal or extraskeletal chondrosarcoma.","definition_xrefs":["NCIT:C8778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrosarcoma","termid":"MONDO:0008977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"localized chondrosarcoma","secondary_identifiers":["UMLS:C0855011","MEDGEN:163180","DOID:5862"],"synonyms":[{"name":"chondrosarcoma, localised","type":"exact"},{"name":"chondrosarcoma, localized","type":"exact"},{"name":"localized chondrosarcoma","type":"exact"}],"termid":"MONDO:0003682","xrefs":{"Monarch":{"xref_id":"0003682"}}}


id: GO:0061355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a Wnt protein from a cell.","definition_xrefs":["PMID:19223472","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"Wnt protein secretion","termid":"GO:0061355"}


id: PBO:0046880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A5, pseudogene","termid":"PBO:0046880"}


id: GO:0170055
data:
  {"annotated_genes":["SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170045"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a lipid from one side of a membrane to the other.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"},{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"lipid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170055","terms_by_termid":{"GO:0170045":null}}


id: PBO:0047876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(4)(p16.1)","termid":"PBO:0047876"}


id: GO:0060745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the mammary gland duct is generated and organized as a part of pregnancy.","definition_xrefs":["GOC:dph","PMID:19261859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"maternal process involved in female pregnancy","termid":"GO:0060135"},{"relation_name":"is_a","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland branching involved in pregnancy","termid":"GO:0060745"}


id: PBO:0063626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 2","termid":"PBO:0063626"}


id: PBO:0079549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 2","termid":"PBO:0079549"}


id: PBO:0081039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 15","termid":"PBO:0081039"}


id: MONDO:0016649
data:
  {"annotated_genes":["SJAG_04938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014296"}]},"cv_name":"mondo","definition":"Micro syndrome is an autosomal recessive disorder caracterised by ocular and neurodevelopmental defects and by microgenitalia. It presents with severe intellectual disability, microcephaly, congenital cataract, microcornea, microphthalmia, agenesis/hypoplasia of the corpus callosum, and hypogenitalism.","definition_xrefs":["Orphanet:2510"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"},{"relation_name":"is_a","term_name":"RAB18 deficiency","termid":"MONDO:0700247"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04938":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"Warburg micro syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1781286","DOID:0060237","OMIMPS:600118","GARD:5534","NORD:1898","UMLS:C5442005"],"synonyms":[{"name":"WARBM","type":"exact"},{"name":"Warburg micro syndrome","type":"exact"},{"name":"Warburg-Sjo-Fledelius syndrome","type":"exact"},{"name":"micro syndrome","type":"exact"},{"name":"microcephaly, microcornea, congenital cataract, intellectual disability, optic atrophy and hypogenitalism","type":"related"},{"name":"microcephaly, microcornea, congenital cataract, mental retardation, optic atrophy and hypogenitalism","type":"related"}],"termid":"MONDO:0016649","terms_by_termid":{"MONDO:0014296":null},"xrefs":{"Monarch":{"xref_id":"0016649"}}}


id: PBO:0067273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 351, pseudogene","termid":"PBO:0067273"}


id: MONDO:0017317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phakomatosis pigmentokeratotica (PPK) is a very rare epidermal nevus disorder characterized by the association of speckled lentiginous nevi with epidermal sebaceous nevi, and extracutaneous anomalies.","definition_xrefs":["Orphanet:2874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system benign neoplasm","termid":"MONDO:0000648"},{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"phakomatosis pigmentokeratotica","secondary_identifiers":["icd11.foundation:960559196","SCTID:723455009","UMLS:C2931658","GARD:4311","MESH:C537893","MEDGEN:419860"],"synonyms":[{"name":"Phacomatosis pigmentokeratotica","type":"related"},{"name":"organoid nevus with sebaceous differentiation, a speckled-lentiginous nevus, and other associated anomalies","type":"related"}],"termid":"MONDO:0017317","xrefs":{"Monarch":{"xref_id":"0017317"}}}


id: MONDO:0100085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the upper limb long bone.","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer affecting bone of limb skeleton","termid":"MONDO:0024311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cancer of long bone of upper limb","secondary_identifiers":["UMLS:C0684596","MEDGEN:671616"],"synonyms":[{"name":"cancer of fore limb long bone","type":"exact"},{"name":"cancer of long bone of fore limb","type":"exact"},{"name":"cancer of long bone of forelimb","type":"exact"},{"name":"cancer of long bone of upper extremity","type":"exact"},{"name":"cancer of upper extremity long bone","type":"exact"},{"name":"long bones of upper limb cancer","type":"exact"},{"name":"malignant neoplasm of upper limb long bone","type":"exact"},{"name":"malignant upper limb long bone neoplasm","type":"exact"}],"termid":"MONDO:0100085","xrefs":{"Monarch":{"xref_id":"0100085"}}}


id: PBO:0047615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIBCD1 antisense RNA 1","termid":"PBO:0047615"}


id: PBO:0039191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"akirin 1 pseudogene 2","termid":"PBO:0039191"}


id: PBO:0036061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_eMTOC_during_vegetative_growth","termid":"PBO:0036061"}


id: PBO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine synthase Cys12","termid":"PBO:0000983"}


id: GO:0018528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: iminodiacetate + OH- = H+ + 2 e- + glyoxylate + glycine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete iminodiacetate dehydrogenase activity (obsolete GO:0018528)","termid":"GO:0018528"}


id: PBO:0079542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like modifier activating enzyme 3","termid":"PBO:0079542"}


id: MONDO:0957584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 85","secondary_identifiers":["MEDGEN:1849976","UMLS:C5882685","OMIM:620490","DOID:0070584"],"termid":"MONDO:0957584","xrefs":{"Monarch":{"xref_id":"0957584"}}}


id: PBO:0081386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF225 and ZNF224 antisense RNA 1","termid":"PBO:0081386"}


id: PBO:0003925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleocytoplasmic transport chaperone Srp40 (predicted)","termid":"PBO:0003925"}


id: PBO:0111447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex cyclin-dependent protein kinase subunit Srb10","termid":"PBO:0111447"}


id: GO:0044758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts synaptic transmission, the communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse, in its host organism.","definition_xrefs":["PMID:26487282","GOC:jl","PMID:31075318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host synaptic transmission","synonyms":[{"name":"modulation by symbiont of host synaptic transmission","type":"exact"},{"name":"regulation by symbiont of host synaptic transmission","type":"exact"}],"termid":"GO:0044758"}


id: PBO:0042845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 53","termid":"PBO:0042845"}


id: GO:0031985
data:
  {"annotated_genes":["SJAG_01276","SJAG_03555","SJAG_04112","SJAG_01025","SJAG_00567","SJAG_04739","SJAG_04095","SJAG_01516","SJAG_03347","SJAG_04770","SJAG_03634","SJAG_03278","SJAG_00816"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77251],"is_not":false,"summary":null,"term":"GO:0031985"},{"annotations":[75457,95842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000137"},{"annotations":[71092,97890,76267,78343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005797"},{"annotations":[76266,95843,71091,78342,99310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000138"},{"annotations":[69731],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[104750,87292,97682,117844],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"Any of the thin, flattened membrane-bounded compartments that form the central portion of the Golgi complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus subcompartment","termid":"GO:0098791"},{"relation_name":"part_of","term_name":"Golgi stack","termid":"GO:0005795"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00567":null,"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_01516":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03555":null,"SJAG_03634":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04739":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005794"],"is_obsolete":false,"name":"Golgi cisterna","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao561419532"],"synonyms":[{"name":"Golgi apparatus cisterna","type":"exact"},{"name":"Golgi lamellae","type":"related"}],"termid":"GO:0031985","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0005797":null,"GO:0031985":null,"GO:0140497":null}}


id: PBO:0078173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-4","termid":"PBO:0078173"}


id: GO:0008436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete heterogeneous nuclear ribonucleoprotein (obsolete GO:0008436)","synonyms":[{"name":"heterogeneous nuclear ribonucleoprotein","type":"exact"},{"name":"hnRNP","type":"exact"}],"termid":"GO:0008436"}


id: SO:0000792
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000792 cloned_cDNA (obsolete SO:0000792)","termid":"SO:0000792"}


id: PBO:0058372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4744","termid":"PBO:0058372"}


id: GO:0051823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synapse structural plasticity. Synapse structural plasticity is a type of cytoskeletal remodeling; this remodeling is induced by stimuli that can lead to long term potentiation and it can be activity-dependent or -independent. Examples of cytoskeletal changes include the formation of new spines and increase in spine size; this can be accompanied by the insertion of greater numbers of glutamate (or other neurotransmitter) receptors into the post-synaptic membrane.","definition_xrefs":["PMID:9884123","PMID:14976517","PMID:11063967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse structural plasticity","synonyms":[{"name":"regulation of synaptic structural plasticity","type":"exact"}],"termid":"GO:0051823"}


id: PBO:0057824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3143","termid":"PBO:0057824"}


id: PBO:0042069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC137 pseudogene 2","termid":"PBO:0042069"}


id: PBO:0046858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAF1 antisense RNA 1","termid":"PBO:0046858"}


id: PBO:0087119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-finger peroxin and E3 ubiquitin ligase; peroxisomal membrane protein with a C-terminal zinc-binding RING domain, forms translocation subcomplex with Pex10p and Pex12p which functions in peroxisomal matrix protein import","termid":"PBO:0087119"}


id: GO:0047889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + H2O + 2 oxidized ferredoxin = nitrate + 2 reduced ferredoxin.","definition_xrefs":["RHEA:21828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase activity","termid":"GO:0008940"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, iron-sulfur protein as acceptor","termid":"GO:0016664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ferredoxin-nitrate reductase activity","secondary_identifiers":["MetaCyc:1.7.7.2-RXN","EC:1.7.7.2"],"synonyms":[{"name":"assimilatory ferredoxin-nitrate reductase activity","type":"related"},{"name":"assimilatory nitrate reductase activity","type":"broad"},{"name":"nitrate (ferredoxin) reductase activity","type":"related"},{"name":"nitrite:ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0047889"}


id: PBO:0057371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548am","termid":"PBO:0057371"}


id: GO:0051407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerone phosphate(out) + phosphate(in) = glycerone phosphate(in) + phosphate(out).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"glycerone phosphate:phosphate antiporter activity","synonyms":[{"name":"dihydroxyacetone-phosphate:inorganic phosphate antiporter activity","type":"exact"},{"name":"glycerone phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0051407"}


id: PBO:0067346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 443, pseudogene","termid":"PBO:0067346"}


id: PBO:0082411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways; forms a complex with another bHLH/Zip protein, Rtg1p, to activate the pathways; target of Hog1p","termid":"PBO:0082411"}


id: PBO:0108903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD39 pseudogene 1","termid":"PBO:0108903"}


id: PBO:0111736
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_gene","termid":"PBO:0111736"}


id: GO:2001121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a coenzyme gamma-F420-2.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme gamma-F420-2 metabolic process","termid":"GO:0052649"},{"relation_name":"is_a","term_name":"tricarboxylic acid biosynthetic process","termid":"GO:0072351"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"coenzyme gamma-F420-2 biosynthetic process","synonyms":[{"name":"coenzyme gamma-F420-2 biosynthesis","type":"exact"}],"termid":"GO:2001121"}


id: MONDO:1010127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatomyositis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymyositis, non-human animal","termid":"MONDO:1010203"},{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatomyositis, non-human animal","secondary_identifiers":["OMIA:000270"],"termid":"MONDO:1010127","xrefs":{"Monarch":{"xref_id":"1010127"}}}


id: PBO:0114288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisome mebbrane ubiquitin conjugating enzyme E2 Ubc16 Pex4","termid":"PBO:0114288"}


id: GO:0002594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation via MHC class Ib","synonyms":[{"name":"activation of antigen processing and presentation via MHC class Ib","type":"narrow"},{"name":"stimulation of antigen processing and presentation via MHC class Ib","type":"narrow"},{"name":"up regulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"up-regulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"upregulation of antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002594"}


id: PBO:0054867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2281","termid":"PBO:0054867"}


id: MONDO:0019712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete patellar dysostosis (obsolete MONDO:0019712)","secondary_identifiers":["Orphanet:93455"],"termid":"MONDO:0019712","xrefs":{"Monarch":{"xref_id":"0019712"}}}


id: PBO:0054679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2087","termid":"PBO:0054679"}


id: RO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A 'has regulatory component activity' B if A and B are GO molecular functions (GO_0003674), A has_component B and A is regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_activity","termid":"RO:0002017"},{"relation_name":"is_a","term_name":"regulated_by","termid":"RO:0002334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_regulatory_component_activity","termid":"RO:0002013"}


id: MONDO:1010694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AL amyloidosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AL amyloidosis, non-human animal","termid":"MONDO:1010093"},{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, domestic cat","termid":"MONDO:1010459"},{"relation_name":"is_a","term_name":"amyloidosis, domestic cat","termid":"MONDO:1011468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AL amyloidosis, domestic cat","secondary_identifiers":["OMIA:000039-9685"],"termid":"MONDO:1010694","xrefs":{"Monarch":{"xref_id":"1010694"}}}


id: MONDO:0100105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder resulting from fragility of cerebral vessels causing an increased risk of intracranial bleeding. The resultant phenotype is highly variable depending on timing and location of the intracranial bleed. Some patients may have onset in utero or early infancy, with subsequent global developmental delay, spasticity, and porencephaly on brain imaging. Other patients may have normal or mildly delayed development with sudden onset of intracranial hemorrhage causing acute neurologic deterioration.","definition_xrefs":["OMIM:618360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial porencephaly","termid":"MONDO:0020496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain small vessel disease 3","secondary_identifiers":["UMLS:C5193053","MEDGEN:1677948","DOID:0112315"],"synonyms":[{"name":"BSVD3","type":"exact"}],"termid":"MONDO:0100105","xrefs":{"Monarch":{"xref_id":"0100105"}}}


id: PBO:0057308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516b-1","termid":"PBO:0057308"}


id: PR:Q9Y7S2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.03 gene.","definition_xrefs":["UniProtKB:Q9Y7S2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0612 protein C569.003 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.03","synonyms":[{"name":"Spom972h-SPCC569.03","type":"exact"}],"termid":"PR:Q9Y7S2"}


id: PBO:0079702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U-box domain containing 5","termid":"PBO:0079702"}


id: PBO:0041246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 131","termid":"PBO:0041246"}


id: PBO:0035982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_deacetylation_during_vegetative_growth","termid":"PBO:0035982"}


id: GO:0140754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in intracellular membranes are reorganized by viral proteins that perturb membrane integrity and can cause an extensive rearrangement of cellular membranes, forming membranous webs, which are thought to be the site of replication or certain viruses, for example the HPV virus.","definition_xrefs":["PMID:19376974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reorganization of cellular membranes to establish viral sites of replication","termid":"GO:0140754"}


id: RO:0002451
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a disease and organism","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmitted_by","termid":"RO:0002451"}


id: GO:0102240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-galactose + soyasapogenol B 3-O-beta-glucuronate = H+ + UDP + soyasaponin III.","definition_xrefs":["EC:2.4.1.272","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"soyasapogenol B glucuronide galactosyltransferase activity","secondary_identifiers":["RHEA:31487","MetaCyc:RXN-12319"],"termid":"GO:0102240"}


id: MONDO:0022946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness progressive cataract autosomal dominant","termid":"MONDO:0022946","xrefs":{"Monarch":{"xref_id":"0022946"}}}


id: MONDO:0014841
data:
  {"annotated_genes":["SJAG_00159"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85425],"is_not":false,"summary":null,"term":"MONDO:0014841"}]},"cv_name":"mondo","definition":"Any nonphotosensitive trichothiodystrophy in which the cause of the disease is a mutation in the GTF2E2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichothiodystrophy","termid":"MONDO:0018053"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00159":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy 6, nonphotosensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111872","OMIM:616943","GARD:16172","UMLS:C4310785","MEDGEN:934752"],"synonyms":[{"name":"GTF2E2 nonphotosensitive trichothiodystrophy","type":"exact"},{"name":"TTD6","type":"exact"},{"name":"nonphotosensitive trichothiodystrophy caused by mutation in GTF2E2","type":"exact"},{"name":"trichothiodystrophy 6, nonphotosensitive","type":"exact"},{"name":"trichothiodystrophy 6, nonphotosensitive; TTD6","type":"exact"}],"termid":"MONDO:0014841","terms_by_termid":{"MONDO:0014841":null},"xrefs":{"Monarch":{"xref_id":"0014841"}}}


id: PBO:0112753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 3, Agm3","termid":"PBO:0112753"}


id: MONDO:0009252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Essential fructosuria is a rare autosomal recessive disorder of fructose metabolism caused by a deficiency of fructokinaseenzyme activity. It is characterized by elevated fructosemia and presence of fructosuria following ingestion of fructose and related sugars (sucrose, sorbitol). Essential fructosuria is clinically asymptomatic and harmless. Dietary restriction is not indicated.","definition_xrefs":["Orphanet:2056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fructose metabolism","termid":"MONDO:0017689"},{"relation_name":"is_a","term_name":"disorder of galactose and fructose metabolism","termid":"MONDO:0800152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"essential fructosuria","secondary_identifiers":["MESH:C538068","DOID:0111680","OMIM:229800","UMLS:C0268160","icd11.foundation:1362211287","GARD:6471","MEDGEN:78645","ICD10CM:E74.11","SCTID:40278002","MedDRA:10015487"],"synonyms":[{"name":"fructokinase deficiency","type":"exact"},{"name":"fructosuria, essential","type":"exact"},{"name":"hepatic fructokinase deficiency","type":"related"},{"name":"ketohexokinase deficiency","type":"exact"}],"termid":"MONDO:0009252","xrefs":{"Monarch":{"xref_id":"0009252"}}}


id: PBO:0067726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 24","termid":"PBO:0067726"}


id: PBO:0085818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels; SWAT-GFP and mCherry fusion proteins localize to the vacuole","termid":"PBO:0085818"}


id: GO:0070199
data:
  {"annotated_genes":["SJAG_02336","SJAG_02761","SJAG_03540","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100188,118461,103696,108062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location on a chromosome.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to chromosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to chromosome","type":"exact"}],"termid":"GO:0070199","terms_by_termid":{"GO:0140210":null}}


id: PBO:0090292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1/S-specific B-type cyclin Cig1","termid":"PBO:0090292"}


id: PBO:0091019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multispanning membrane protein, CTNS/PQ domain protein","termid":"PBO:0091019"}


id: GO:0043586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the tongue over time, from its formation to the mature structure. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in many other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech.","definition_xrefs":["GOC:jl","UBERON:0001723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tongue development","synonyms":[{"name":"glossa development","type":"narrow"},{"name":"lingua development","type":"narrow"}],"termid":"GO:0043586"}


id: PBO:0052636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 4","termid":"PBO:0052636"}


id: MONDO:0009175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic fasciitis is a rare connective tissue disease that is characterized by inflammation and thickening of the fascia, usually associated with peripheral eosinophilia. It presents during adulthood with symmetrical and painful swelling of mainly the extremities that progressively become indurated. Fatigue, disabling cutaneous fibrosis, myositis and arthritis may also be observed.","definition_xrefs":["Orphanet:3165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fasciitis","termid":"MONDO:0004830"},{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"eosinophilic fasciitis","secondary_identifiers":["GARD:6351","icd11.foundation:1977389237","MESH:C562487","HP:0045029","MEDGEN:82673","NCIT:C112116","OMIM:226350","ICD9:728.89","UMLS:C0264005","MedDRA:10014954","SCTID:24129002"],"synonyms":[{"name":"EF","type":"related"},{"name":"Shulman syndrome","type":"exact"},{"name":"diffuse fasciitis with eosinophilia","type":"exact"},{"name":"eosinophilic fasciitis","type":"exact"},{"name":"eosinophilic fasciitis (disease)","type":"exact"}],"termid":"MONDO:0009175","xrefs":{"Monarch":{"xref_id":"0009175"}}}


id: PATO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pilosity quality of being covered with short hairs or soft down.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubescent hair","termid":"PATO:0001320"}


id: PBO:0039816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 6","termid":"PBO:0039816"}


id: GO:0098850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the synaptic vesicle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"synaptic vesicle membrane","termid":"GO:0030672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of synaptic vesicle membrane","termid":"GO:0098850"}


id: GO:0090369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of ornithine carbamoyltransferase.","definition_xrefs":["GOC:dph","GOC:jp","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772","GO:0140678","GO:0004857"],"is_obsolete":false,"name":"ornithine carbamoyltransferase inhibitor activity","termid":"GO:0090369"}


id: GO:1905053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of base-excision repair.","definition_xrefs":["GOC:ah","GO_REF:0000058","GOC:TermGenie","PMID:18973764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of base-excision repair","termid":"GO:1905051"},{"relation_name":"positively_regulates","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of base-excision repair","synonyms":[{"name":"activation of BER","type":"narrow"},{"name":"activation of base-excision repair","type":"narrow"},{"name":"positive regulation of BER","type":"exact"},{"name":"up regulation of BER","type":"exact"},{"name":"up regulation of base-excision repair","type":"exact"},{"name":"up-regulation of BER","type":"exact"},{"name":"up-regulation of base-excision repair","type":"exact"},{"name":"upregulation of BER","type":"exact"},{"name":"upregulation of base-excision repair","type":"exact"}],"termid":"GO:1905053"}


id: GO:0005731
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of a chromosome where nucleoli form during interphase, and where genes encoding the largest rRNA precursor transcript are tandemly arrayed.","definition_xrefs":["PMID:14504406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleolar chromatin","termid":"GO:0030874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634","GO:0005730"],"is_obsolete":false,"name":"nucleolus organizer region","secondary_identifiers":["Wikipedia:Nucleolus_organizer_region"],"synonyms":[{"name":"NOR","type":"exact"},{"name":"nucleolus organiser region","type":"exact"},{"name":"nucleolus organizer complex","type":"related"}],"termid":"GO:0005731"}


id: PBO:0055654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3094","termid":"PBO:0055654"}


id: GO:0032100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases appetite.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to food","termid":"GO:0032097"},{"relation_name":"is_a","term_name":"regulation of appetite","termid":"GO:0032098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of appetite","synonyms":[{"name":"activation of appetite","type":"narrow"},{"name":"appetite stimulation","type":"related"},{"name":"positive regulation of hunger","type":"related"},{"name":"stimulation of appetite","type":"narrow"},{"name":"up regulation of appetite","type":"exact"},{"name":"up-regulation of appetite","type":"exact"},{"name":"upregulation of appetite","type":"exact"}],"termid":"GO:0032100"}


id: GO:0060161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the dopamine receptor protein signaling pathway. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of dopamine receptor signaling pathway","termid":"GO:0060159"},{"relation_name":"positively_regulates","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine receptor signaling pathway","synonyms":[{"name":"positive regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060161"}


id: GO:1902299
data:
  {"annotated_genes":["SJAG_02074","SJAG_02607","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103116,110355,114815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"Any pre-replicative complex assembly that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"pre-replicative complex assembly","termid":"GO:0036388"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0007049","GO:0006260","GO:0044085","GO:0006259"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-RC assembly involved in cell cycle DNA replication","type":"exact"},{"name":"pre-replication complex assembly involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902299","terms_by_termid":{"GO:1902985":null}}


id: PBO:0077186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 9","termid":"PBO:0077186"}


id: GO:1900095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of dosage compensation, by inactivation of X chromosome.","definition_xrefs":["GOC:TermGenie","PMID:20622855","GOC:mr","Wikipedia:XY_sex-determination_system"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of dosage compensation by inactivation of X chromosome (obsolete GO:1900095)","synonyms":[{"name":"regulation of Barr body formation","type":"related"},{"name":"regulation of X chromosome inactivation","type":"exact"},{"name":"regulation of chromosome inactivation","type":"broad"}],"termid":"GO:1900095"}


id: PBO:0051223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-81 (non-functional)","termid":"PBO:0051223"}


id: PBO:0017501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoatehydroxymethyltransferase Ecm31 (predicted)","termid":"PBO:0017501"}


id: MONDO:0013334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal encasement syndrome is a rare, lethal developmental defect during embryogenesis characterized by severe fetal malformations, including craniofacial dysmorphism (abnormal cyst in the cranial region, hypoplastic eyeballs, two orifices in the nasal region separated by a nasal septum, abnormal orifice replacing the mouth), omphalocele and immotile, hypoplastic limbs encased under an abnormal, transparent, membrane-like skin. Additional features include absence of adnexal structures of the skin on the outer aspect of the limbs, as well as underdeveloped skeletal muscles and bones. Association with tetralogy of Fallot, horse-shoe kidneys and diaphragm and lung lobulation defects is reported.","definition_xrefs":["Orphanet:465824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cocoon syndrome","secondary_identifiers":["DOID:0060647","GARD:17823","UMLS:C3150891","MEDGEN:462241","OMIM:613630"],"synonyms":[{"name":"cocoon syndrome","type":"exact"},{"name":"fetal encasement syndrome","type":"exact"},{"name":"foetal encasement syndrome","type":"exact"}],"termid":"MONDO:0013334","xrefs":{"Monarch":{"xref_id":"0013334"}}}


id: PBO:0052483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 8B","termid":"PBO:0052483"}


id: MOD:01506
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["Unimod:214","Unimod:889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 144.102062 Da","termid":"MOD:01517"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated residue","termid":"MOD:01518"},{"relation_name":"is_a","term_name":"mTRAQ reporter+balance reagent acylated residue","termid":"MOD:01863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ4plex","type":"related"},{"name":"mTRAQ heavy","type":"related"}],"termid":"MOD:01506"}


id: FYPO:0001886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which haploid cells undergo meiotic nuclear division and attempt to sporulate. Haploid meiosis often results in the formation of a structure that resembles an azygotic ascus. Spores produced from a haploid cell have poor viability and appear to contain only 1/2C DNA on average.","definition_xrefs":["DOI:10.1007/BF00332932","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"meiotic cell cycle entry and sporulation in haploid","secondary_identifiers":["FYPO:0001887"],"synonyms":[{"name":"haploid meiosis","type":"related"},{"name":"haploid sporulation","type":"related"},{"name":"meiosis in haploid","type":"related"},{"name":"meiotic nuclear division and sporulation in haploid","type":"narrow"},{"name":"sporulation in haploid","type":"related"},{"name":"untimely meiosis","type":"broad"}],"termid":"FYPO:0001886"}


id: MONDO:0032526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia 48","secondary_identifiers":["MEDGEN:1648409","OMIM:618093","Orphanet:631103","UMLS:C4748158","DOID:0111746"],"synonyms":[{"name":"SCA48","type":"related"},{"name":"SPINOCEREBELLAR ATAXIA 48","type":"related"}],"termid":"MONDO:0032526","xrefs":{"Monarch":{"xref_id":"0032526"}}}


id: MONDO:0100433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome associated with developmental delay, mild intellectual disability, microcephaly, and thrombocytopenia with platelet anisotropy and enlarged platelets.","definition_xrefs":["PMID:30315159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"ACTB-associated syndromic thrombocytopenia","secondary_identifiers":["MEDGEN:1851006","UMLS:C5882677","OMIM:620475"],"synonyms":[{"name":"ACTB-AST","type":"exact"},{"name":"thrombocytopenia 8, with dysmorphic features and developmental delay","type":"exact"}],"termid":"MONDO:0100433","xrefs":{"Monarch":{"xref_id":"0100433"}}}


id: PR:O42980
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nep1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-specific protease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.01","synonyms":[{"name":"Spom972h-nep1","type":"exact"}],"termid":"PR:O42980"}


id: GO:0030952
data:
  {"annotated_genes":["SJAG_00030","SJAG_04461","SJAG_00661","SJAG_02838","SJAG_00152","SJAG_02624","SJAG_01613","SJAG_00424","SJAG_03540","SJAG_02392","SJAG_03748","SJAG_00229"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101072],"is_not":false,"summary":null,"term":"GO:0030952"},{"annotations":[73045,105156,95640,99976,88255,99128,89223,110555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030950"},{"annotations":[76591,79299,99023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030951"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00152":null,"SJAG_00229":null,"SJAG_00424":null,"SJAG_00661":null,"SJAG_01613":null,"SJAG_02392":null,"SJAG_02624":null,"SJAG_02838":null,"SJAG_03540":null,"SJAG_03748":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of cytoskeleton polarity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytoskeleton polarization","type":"related"}],"termid":"GO:0030952","terms_by_termid":{"GO:0030950":null,"GO:0030951":null,"GO:0030952":null}}


id: PR:O14074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein UNK4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.09","synonyms":[{"name":"Spom972h-SPACUNK4.09","type":"exact"}],"termid":"PR:O14074"}


id: GO:1990002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxyacetone + NADP+ = H+ + methylglyoxal + NADPH.","definition_xrefs":["PMID:16077126","RHEA:27986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylglyoxal reductase (NADPH) (acetol producing) activity","secondary_identifiers":["MetaCyc:RXN0-4281"],"synonyms":[{"name":"methylglyoxal reductase (NADPH-dependent, acetol producing)","type":"exact"}],"termid":"GO:1990002"}


id: PBO:0080040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 26","termid":"PBO:0080040"}


id: PBO:0048949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic-oxaloacetic transaminase 2","termid":"PBO:0048949"}


id: PBO:0017038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small-subunit processome, UTP-C complex subunit Utp22 (predicted)","termid":"PBO:0017038"}


id: MOD:01572
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01572"}


id: PBO:0036390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human LCHN ortholog","termid":"PBO:0036390"}


id: GO:1901080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of relaxation of smooth muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"regulates","term_name":"relaxation of smooth muscle","termid":"GO:0044557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of relaxation of smooth muscle","synonyms":[{"name":"regulation of smooth muscle relaxation","type":"exact"}],"termid":"GO:1901080"}


id: GO:1990799
data:
  {"annotated_genes":["SJAG_00358","SJAG_04113"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94060,116753],"is_not":false,"summary":null,"term":"GO:1990799"}]},"cv_name":"biological_process","definition":"The process in which a uridine residue at position 34 in the anticodon of a mitochondrial tRNA is post-transcriptionally thiolated at the C2 position. This process involves transfer of a sulfur from cysteine to position C2 by several steps.","definition_xrefs":["PMID:15509579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble position uridine thiolation","termid":"GO:0002143"},{"relation_name":"is_a","term_name":"mitochondrial tRNA wobble uridine modification","termid":"GO:0070899"},{"relation_name":"is_a","term_name":"mitochondrial tRNA thio-modification","termid":"GO:0070903"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_04113":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150","GO:0140053"],"is_obsolete":false,"name":"mitochondrial tRNA wobble position uridine thiolation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990799","terms_by_termid":{"GO:1990799":null}}


id: MONDO:0016787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelioid trophoblastic tumor is an extremely rare gestational trophoblastic tumor (GTT) which generally occurs several years after pregnancy.","definition_xrefs":["Orphanet:254698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gestational trophoblastic neoplasm","termid":"MONDO:0018944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelioid trophoblastic tumor","secondary_identifiers":["GARD:20750","UMLS:C1266159","SCTID:609515005","ONCOTREE:ETT","DOID:3593","NCIT:C6900","ICDO:9105/3","MEDGEN:266107"],"synonyms":[{"name":"ETT","type":"related"},{"name":"epithelioid trophoblastic tumor","type":"exact"}],"termid":"MONDO:0016787","xrefs":{"Monarch":{"xref_id":"0016787"}}}


id: PBO:0063983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 17","termid":"PBO:0063983"}


id: GO:1902215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-4-mediated signaling pathway.","definition_xrefs":["PMID:17210636","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-4-mediated signaling pathway","termid":"GO:1902214"},{"relation_name":"negatively_regulates","term_name":"interleukin-4-mediated signaling pathway","termid":"GO:0035771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of interleukin-4-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-4-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-4-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-4-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-4-mediated signalling pathway","type":"exact"}],"termid":"GO:1902215"}


id: _global:regulates_o_has_participant
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This is the combination of the regulates relation with the has_participant relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_has_participant","secondary_identifiers":["GOREL:0001016"],"termid":"_global:regulates_o_has_participant"}


id: MONDO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An oligodendroglioma occurring during adulthood.","definition_xrefs":["NCIT:C4014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligodendroglioma","termid":"MONDO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult oligodendroglioma","secondary_identifiers":["DOID:3186","NANDO:2200089","UMLS:C0279070","MEDGEN:75924"],"synonyms":[{"name":"adult brain oligodendroglioma","type":"narrow"},{"name":"adult oligodendroglioma","type":"exact"},{"name":"grade II adult oligodendroglial tumor","type":"exact"},{"name":"grade II adult oligodendroglial tumour","type":"exact"},{"name":"oligodendroglioma","type":"broad"},{"name":"oligodendroglioma of adults","type":"exact"}],"termid":"MONDO:0002543","xrefs":{"Monarch":{"xref_id":"0002543"}}}


id: GO:1990662
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a S100A9 dimer and capable of binding to toll-like receptor 4 (TLR4) and the receptor for advanced glycation end products (RAGE) initiating signal transduction through NF-kappa-B pathways. Transports arachidonic acid between the cytosol and the NADPH oxidase complex at the plasma membrane in neutrophils as part of an inflammatory signal cascade leading to an oxidative burst. Complexes with microtubules to increase cell motility.","definition_xrefs":["PMID:15642721","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"S100A9 complex","synonyms":[{"name":"S100A9 homodimer","type":"exact"}],"termid":"GO:1990662"}


id: MOD:01352
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to a nitrated L-tyrosine.","definition_xrefs":["PubMed:14678012","PubMed:9252331","PubMed:8839040","OMSSA:86","Unimod:354#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrosylation","termid":"MOD:00461"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrated L-tyrosine","synonyms":[{"name":"Nitro","type":"related"},{"name":"Oxidation to nitro","type":"related"},{"name":"nitroy","type":"exact"}],"termid":"MOD:01352"}


id: MONDO:0010779
data:
  {"annotated_genes":["SJAG_MIT04"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85738],"is_not":false,"summary":null,"term":"MONDO:0010779"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"prelingual non-syndromic genetic hearing loss","termid":"MONDO:0016297"},{"relation_name":"excluded_subClassOf","term_name":"postlingual non-syndromic genetic hearing loss","termid":"MONDO:0016298"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":1,"genes_by_uniquename":{"SJAG_MIT04":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial non-syndromic sensorineural hearing loss","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16792","Orphanet:90641","UMLS:C3151897","DOID:0111751","OMIM:500008","MEDGEN:463247"],"synonyms":[{"name":"deafness, isolated, due to mitochondrial transmission","type":"narrow"},{"name":"deafness, nonsyndromic sensorineural, mitochondrial","type":"related"},{"name":"isolated mitochondrial neurosensory deafness","type":"narrow"},{"name":"isolated mitochondrial sensorineural deafness","type":"narrow"},{"name":"mitochondrial non-syndromic neurosensory deafness","type":"narrow"},{"name":"mitochondrial non-syndromic sensorineural deafness","type":"narrow"}],"termid":"MONDO:0010779","terms_by_termid":{"MONDO:0010779":null},"xrefs":{"Monarch":{"xref_id":"0010779"}}}


id: GO:0047644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alizarin + UDP-D-glucose = 1-hydroxy-2-(beta-D-glucosyloxy)-9,10-anthraquinone + H+ + UDP.","definition_xrefs":["RHEA:20677","EC:2.4.1.103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alizarin 2-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:ALIZARIN-2-BETA-GLUCOSYLTRANSFERASE-RXN","KEGG_REACTION:R03573"],"synonyms":[{"name":"UDP-glucose:1,2-dihydroxy-9,10-anthraquinone 2-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:1,2-dihydroxy-9,10-anthraquinone 2-O-beta-D-glucosyl-transferase activity","type":"related"},{"name":"alizarin 2-b-glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-alizarin glucosyltransferase activity","type":"related"}],"termid":"GO:0047644"}


id: MOD:00211
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and a glycine residue by a thioester bond to form S-glycyl-L-cysteine.","definition_xrefs":["PubMed:3306404","RESID:AA0206","ChEBI:22050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(glycyl)-L-cysteine (Cys-Gly)","synonyms":[{"name":"(2R)-2-amino-3-[(aminoacetyl)sulfanyl]propanoic acid","type":"exact"},{"name":"1-(cystein-S-yl)-glycinate","type":"exact"},{"name":"ACT_SITE Glycyl thioester intermediate","type":"exact"},{"name":"S-(2-amino-1-oxoethyl)cysteine","type":"exact"},{"name":"S-(glycyl)-L-cysteine","type":"exact"},{"name":"XLNK-SCys-1Gly","type":"exact"},{"name":"glycine cysteine thioester","type":"exact"}],"termid":"MOD:00211"}


id: GO:0097312
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the biofilm matrix, a structure lying external to bacterial cells. A biofilm is an aggregate of surface-associated bacteria, and the biofilm matrix is the envelope of polymeric substances that surrounds the bacteria.","definition_xrefs":["Wikipedia:Biofilm","PMID:22571672","GOC:imk"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial biofilm matrix component (obsolete GO:0097312)","synonyms":[{"name":"biofilm matrix part","type":"exact"}],"termid":"GO:0097312"}


id: PR:P08965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:9062192","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis protein mei2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.03c","secondary_identifiers":["UniProtKB:P08965","PR:000027568"],"synonyms":[{"name":"SPAC27D7.03C","type":"related"},{"name":"Spom972h-mei2","type":"exact"}],"termid":"PR:P08965"}


id: MONDO:1011796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-frequency tremor, non-human animal","secondary_identifiers":["OMIA:001200"],"termid":"MONDO:1011796","xrefs":{"Monarch":{"xref_id":"1011796"}}}


id: PR:000028989
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sterol regulatory element-binding protein that is a translation product of the Schizosaccharomyces pombe 972h- sre1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sre1-type sterol regulatory element-binding protein 1","synonyms":[{"name":"SRE-1","type":"related"},{"name":"SRE1","type":"related"},{"name":"SREBP1","type":"related"},{"name":"sre1","type":"exact"}],"termid":"PR:000028989"}


id: PBO:0051798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing N","termid":"PBO:0051798"}


id: PBO:0004299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic loci regulator Clr1","termid":"PBO:0004299"}


id: PR:Q9HDZ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PGAP2-interacting protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01302","PRO:DNx","PANTHER:PTHR14859:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cwh43 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.12","secondary_identifiers":["UniProtKB:Q9HDZ2"],"synonyms":[{"name":"Spom972h-CWH43","type":"exact"}],"termid":"PR:Q9HDZ2"}


id: MOD:00196
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and a glycine residue to form L-cysteine 5-imidazolinone glycine.","definition_xrefs":["PubMed:1537807","RESID:AA0188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1R)-1-amino-2-sulfanylethyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[1-amino-2-sulfanylethyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Cys-Gly)","type":"exact"},{"name":"L-cysteine 5-imidazolinone glycine","type":"exact"},{"name":"XLNK-1Cys-NGly(Imidazole)","type":"exact"},{"name":"cysteinyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00196"}


id: PBO:0076618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor A pseudogene 3","termid":"PBO:0076618"}


id: MONDO:0957382
data:
  {"annotated_genes":["SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86145],"is_not":false,"summary":null,"term":"MONDO:0957382"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620423","MEDGEN:1841222","UMLS:C5830586"],"termid":"MONDO:0957382","terms_by_termid":{"MONDO:0957382":null},"xrefs":{"Monarch":{"xref_id":"0957382"}}}


id: PBO:0000976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-ATPase chaperone Atp11 (predicted)","termid":"PBO:0000976"}


id: MONDO:0018505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of small intestine neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of small intestine (obsolete MONDO:0018505)","secondary_identifiers":["Orphanet:423793"],"synonyms":[{"name":"rare small intestine neoplasm","type":"exact"},{"name":"rare tumor of small bowel","type":"exact"}],"termid":"MONDO:0018505","xrefs":{"Monarch":{"xref_id":"0018505"}}}


id: GO:0005705
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stretch of less tightly packed chromatin along the polytene chromosome, found between bands.","definition_xrefs":["PMID:11361342","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"polytene chromosome interband","termid":"GO:0005705"}


id: PBO:0062695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 6","termid":"PBO:0062695"}


id: PBO:0078653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (CTT) 6-1","termid":"PBO:0078653"}


id: FYPO:0004122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to thiabendazole. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to thiabendazole (obsolete FYPO:0004122)","synonyms":[{"name":"cut during cellular response to TBZ","type":"exact"},{"name":"cut during cellular response to thiabendazole during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to thiabendazole during vegetative growth","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to thiabendazole","type":"exact"}],"termid":"FYPO:0004122"}


id: MONDO:0021272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary orthostatic hypotension","termid":"MONDO:0015914"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited orthostatic hypotension","secondary_identifiers":["MEDGEN:1842591","OMIMPS:223360","UMLS:C5681106","Orphanet:448426","GARD:21878"],"termid":"MONDO:0021272","xrefs":{"Monarch":{"xref_id":"0021272"}}}


id: PBO:0088250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication termination factor Rtf1","termid":"PBO:0088250"}


id: PBO:0068367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 150","termid":"PBO:0068367"}


id: GO:0039574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host TYK2 (tyrosine kinase 2). TYK2 is an intracellular signal-transducing tyrosine kinase involved in numerous cytokines and interferons signaling pathways and transmits the cytokine signal by phosphorylating receptor subunits.","definition_xrefs":["PMID:19085955","PMID:16987978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of host TYK2 activity","secondary_identifiers":["VZ:720"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of host TYK2 activity","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of host TYK2 activity","type":"narrow"},{"name":"suppression by virus of host TYK2 activity","type":"narrow"},{"name":"suppression by virus of host non-receptor tyrosine-protein kinase TYK2 activity","type":"narrow"}],"termid":"GO:0039574"}


id: PBO:0071787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p14","termid":"PBO:0071787"}


id: PBO:0005500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jmj4 protein (predicted)","termid":"PBO:0005500"}


id: PBO:0090606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex subunit A Pcf1","termid":"PBO:0090606"}


id: GO:0090472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein processing achieved by the cleavage of a peptide bond after two basic amino acids within a protein.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"dibasic protein processing","termid":"GO:0090472"}


id: PBO:0047574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor binding protein 2","termid":"PBO:0047574"}


id: GO:0030619
data:
  {"annotated_genes":["SJAG_03983","SJAG_04497","SJAG_05009","SJAG_04911"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72916,75956,76614,113072],"is_not":false,"summary":null,"term":"GO:0030619"}]},"cv_name":"molecular_function","definition":"Binding to a U1 small nuclear RNA (U1 snRNA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03983":null,"SJAG_04497":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"U1 snRNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030619","terms_by_termid":{"GO:0030619":null}}


id: FYPO:0003795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha-glucan level","termid":"FYPO:0001196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cell wall alpha-glucan level","synonyms":[{"name":"normal cell wall alpha-D-glucan level","type":"exact"},{"name":"normal cell wall alpha-glucan accumulation","type":"related"},{"name":"normal cell wall alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"normal cell wall alpha-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0003795"}


id: PR:O13892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc1 gene.","definition_xrefs":["UniProtKB:O13892","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C20G4.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.08","synonyms":[{"name":"Spom972h-pdc1","type":"exact"}],"termid":"PR:O13892"}


id: PBO:0074909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 80","termid":"PBO:0074909"}


id: PBO:0052695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 3","termid":"PBO:0052695"}


id: MONDO:0043885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process affecting any part of the eye. Causes include viruses and bacteria. Symptoms include itching and discomfort in the eye, watery eyes, eye pain and discharge, and blurring vision. Representative examples include pink eye, blepharitis, and trachoma.","definition_xrefs":["NCIT:C45372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"eye infectious disorder","secondary_identifiers":["MEDGEN:41934","MESH:D015817","SCTID:128351009","UMLS:C0015403"],"synonyms":[{"name":"eye infection","type":"exact"},{"name":"infection, eye","type":"related"},{"name":"infection, ocular","type":"related"},{"name":"infections, eye","type":"related"},{"name":"infections, ocular","type":"related"},{"name":"ocular infection","type":"related"},{"name":"ocular infections","type":"related"}],"termid":"MONDO:0043885","xrefs":{"Monarch":{"xref_id":"0043885"}}}


id: GO:0033880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phenylglyoxylyl-CoA = CoA + H+ + phenylglyoxylate.","definition_xrefs":["RHEA:15337","EC:3.1.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"phenylacetyl-CoA hydrolase activity","secondary_identifiers":["KEGG_REACTION:R07294","MetaCyc:3.1.2.25-RXN"],"synonyms":[{"name":"phenylglyoxylyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0033880"}


id: PBO:0038790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase domain containing 1 pseudogene 1","termid":"PBO:0038790"}


id: PATO:0001472
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A depth which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"depth","termid":"PATO:0001595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased depth","secondary_identifiers":["PATO:0001692"],"synonyms":[{"name":"low depth","type":"exact"},{"name":"shallow","type":"exact"}],"termid":"PATO:0001472"}


id: PBO:0113541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein sorting (VPS) protein; required for cytoplasm to vacuole targeting of proteins; targeted to vacuole via AP-3 pathway; VPS62 has a paralog, TDA6, that arose from the whole genome duplication","termid":"PBO:0113541"}


id: PR:P87143
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A7.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C57A7.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.13","synonyms":[{"name":"Spom972h-SPAC57A7.13","type":"exact"}],"termid":"PR:P87143"}


id: PR:Q09835
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gos1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein gos1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.10","synonyms":[{"name":"Golgi SNAP receptor complex member 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Golgi SNARE protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gos1","type":"exact"}],"termid":"PR:Q09835"}


id: SO:0001697
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence identified by CHiP seq technology to contain a protein binding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"contains","term_name":"protein_binding_site","termid":"SO:0000410"},{"relation_name":"is_a","term_name":"experimentally_defined_binding_region","termid":"SO:0001696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChIP_seq_region","synonyms":[{"name":"ChIP seq region","type":"related"}],"termid":"SO:0001697"}


id: MONDO:1012206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"paroxysm, non-human animal","termid":"MONDO:1011628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysm, chicken","secondary_identifiers":["OMIA:000772-9031"],"termid":"MONDO:1012206","xrefs":{"Monarch":{"xref_id":"1012206"}}}


id: FYPO:0006389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the meiotic spindle pole body (SPB) moves rapidly back and forth within the nuclear envelope to a normal (i.e. indistinguishable from wild type) extent during prophase of the first meiotic nuclear division.","definition_xrefs":["PMID:17632059","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic spindle pole body oscillation during prophase I","synonyms":[{"name":"normal meiotic SPB oscillation during prophase I","type":"exact"},{"name":"normal meiotic spindle pole body movement during prophase I","type":"exact"},{"name":"normal spindle pole body oscillation during prophase I","type":"exact"}],"termid":"FYPO:0006389"}


id: PBO:0050011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexokinase 3","termid":"PBO:0050011"}


id: PR:O43060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03575","PANTHER:PTHR10540:SF6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.07","secondary_identifiers":["UniProtKB:O43060"],"synonyms":[{"name":"Spom972h-EIF3F","type":"exact"},{"name":"eIF3f (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43060"}


id: PBO:0079948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP2 antisense RNA 1","termid":"PBO:0079948"}


id: PBO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein beta subunit (predicted)","termid":"PBO:0001721"}


id: PBO:0049544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 7","termid":"PBO:0049544"}


id: PR:O14172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siroheme biosynthesis protein met8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.06c","synonyms":[{"name":"Spom972h-met8","type":"exact"}],"termid":"PR:O14172"}


id: GO:2000290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myotome development.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"myotome development","termid":"GO:0061055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myotome development","termid":"GO:2000290"}


id: GO:0004310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 farnesyl diphosphate = diphosphate + presqualene diphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete farnesyl-diphosphate farnesyltransferase activity (obsolete GO:0004310)","secondary_identifiers":["Reactome:R-HSA-191402","Reactome:R-HSA-191405"],"termid":"GO:0004310"}


id: GO:0033667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which the symbiont stops, prevents or reduces its increase in size or mass or its progression from an initial condition to a later condition, within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of growth or development of symbiont in host (obsolete GO:0033667)","synonyms":[{"name":"down regulation of growth or development of organism within host","type":"exact"},{"name":"down-regulation of growth or development of organism within host","type":"exact"},{"name":"downregulation of growth or development of organism within host","type":"exact"},{"name":"inhibition of growth of development of organism within host","type":"narrow"},{"name":"negative regulation of growth or development of symbiont in host","type":"exact"},{"name":"negative regulation of growth or development of symbiont within host","type":"exact"},{"name":"negative regulation of invasive growth","type":"broad"}],"termid":"GO:0033667"}


id: MONDO:0017530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polysyndactyly 4","termid":"MONDO:0008272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"polysyndactyly, bilateral","secondary_identifiers":["Orphanet:295161","icd11.foundation:622710483"],"synonyms":[{"name":"preaxial polydactyly type 4, bilateral","type":"exact"}],"termid":"MONDO:0017530","xrefs":{"Monarch":{"xref_id":"0017530"}}}


id: GO:0002695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"is_a","term_name":"negative regulation of cell activation","termid":"GO:0050866"},{"relation_name":"negatively_regulates","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte activation","synonyms":[{"name":"down regulation of leukocyte activation","type":"exact"},{"name":"down-regulation of leukocyte activation","type":"exact"},{"name":"downregulation of leukocyte activation","type":"exact"},{"name":"inhibition of leukocyte activation","type":"narrow"},{"name":"negative regulation of immune cell activation","type":"exact"},{"name":"negative regulation of leucocyte activation","type":"exact"}],"termid":"GO:0002695"}


id: MONDO:0001925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal dystrophy in systemic or cerebroretinal lipidoses","secondary_identifiers":["DOID:14253","SCTID:192788009","UMLS:C0154861","MEDGEN:1843490","SCTID:15059000","ICD9:362.71"],"termid":"MONDO:0001925","xrefs":{"Monarch":{"xref_id":"0001925"}}}


id: PBO:0060885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolus and neural progenitor protein","termid":"PBO:0060885"}


id: PBO:0116225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthesis regulator, Gsr2","termid":"PBO:0116225"}


id: GO:0042437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of indole-3-acetic acid, a compound which functions as a growth regulator in plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indoleacetic acid metabolic process","termid":"GO:0009683"},{"relation_name":"is_a","term_name":"auxin catabolic process","termid":"GO:0009852"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"indoleacetic acid catabolic process","synonyms":[{"name":"IAA catabolic process","type":"exact"},{"name":"indole acetic acid catabolic process","type":"exact"},{"name":"indole acetic acid catabolism","type":"exact"},{"name":"indoleacetic acid breakdown","type":"exact"},{"name":"indoleacetic acid catabolism","type":"exact"},{"name":"indoleacetic acid degradation","type":"exact"}],"termid":"GO:0042437"}


id: GO:0031848
data:
  {"annotated_genes":["SJAG_01777","SJAG_03092"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79588,89553],"is_not":false,"summary":null,"term":"GO:0031848"}]},"cv_name":"biological_process","definition":"A process that prevents non-homologous end joining at telomere, thereby ensuring that telomeres do not fuse.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"},{"relation_name":"part_of","term_name":"telomere capping","termid":"GO:0016233"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01777":null,"SJAG_03092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"protection from non-homologous end joining at telomere","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protection from NHEJ-mediated telomere fusion","type":"exact"}],"termid":"GO:0031848","terms_by_termid":{"GO:0031848":null}}


id: GO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the mesonephros.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"regulates","term_name":"mesenchymal stem cell maintenance involved in mesonephric nephron morphogenesis","termid":"GO:0061235"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","synonyms":[{"name":"regulation of mesenchymal stem cell apoptosis involved in mesonephric nephron morphogenesis","type":"narrow"},{"name":"regulation of mesenchymal stem cell apoptotic process involved in mesonephric nephron morphogenesis","type":"exact"}],"termid":"GO:0061295"}


id: GO:0050299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + streptomycin = ADP + 2 H+ + streptomycin 3''-phosphate.","definition_xrefs":["RHEA:18377","EC:2.7.1.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"streptomycin 3''-kinase activity","secondary_identifiers":["KEGG_REACTION:R02227","MetaCyc:STREPTOMYCIN-3-KINASE-RXN"],"synonyms":[{"name":"ATP:streptomycin 3''-phosphotransferase activity","type":"related"},{"name":"streptomycin 3''-kinase (phosphorylating)","type":"related"},{"name":"streptomycin 3''-phosphotransferase activity","type":"related"}],"termid":"GO:0050299"}


id: PBO:0062110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 9 pseudogene","termid":"PBO:0062110"}


id: PBO:0068093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 400","termid":"PBO:0068093"}


id: MONDO:0060532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart defects and skeletal malformations syndrome","secondary_identifiers":["MEDGEN:1618340","Orphanet:643503","UMLS:C4539857","OMIM:617602"],"synonyms":[{"name":"CHDSKM","type":"related"},{"name":"congenital heart defects and skeletal malformations syndrome","type":"exact"},{"name":"marfanoid habitus-facial dysmorphism-skeletal abnormality-heart defect syndrome","type":"exact"}],"termid":"MONDO:0060532","xrefs":{"Monarch":{"xref_id":"0060532"}}}


id: MONDO:0018751
data:
  {"annotated_genes":["SJAG_00863","SJAG_00731","SJAG_03578","SJAG_01444"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044720"},{"annotations":[86823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013385"},{"annotations":[85480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009558"},{"annotations":[85155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030067"}]},"cv_name":"mondo","definition":"An instance of otorhinolaryngologic disease that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00731":null,"SJAG_00863":null,"SJAG_01444":null,"SJAG_03578":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary otorhinolaryngologic disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:466084","MEDGEN:1842579","UMLS:C5681130","GARD:21935"],"synonyms":[{"name":"genetic otorhinolaryngologic disease","type":"exact"}],"termid":"MONDO:0018751","terms_by_termid":{"MONDO:0009558":null,"MONDO:0013385":null,"MONDO:0030067":null,"MONDO:0044720":null},"xrefs":{"Monarch":{"xref_id":"0018751"}}}


id: GO:0008941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 NO + 2 O2 + NAD(P)H + H+ = 2 nitrate + NAD(P)+.","definition_xrefs":["EC:1.14.12.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitric oxide dioxygenase NAD(P)H activity","secondary_identifiers":["Reactome:R-HSA-1222723","MetaCyc:R621-RXN"],"synonyms":[{"name":"NOD activity","type":"related"},{"name":"nitric oxide dioxygenase activity","type":"broad"}],"termid":"GO:0008941"}


id: PBO:0000264
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor syndrome, tuberous sclereosis","termid":"PBO:0000264"}


id: PBO:0017750
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta exists predominantly as a dimer of the heterotetramer (Pol3, Cdc1, Cdc27, and Cdm1)","termid":"PBO:0017750"}


id: PBO:0075540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E20, pseudogene","termid":"PBO:0075540"}


id: FYPO:0005635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle begins later than normal during the first meiotic nuclear division.","definition_xrefs":["PMID:21920317","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein localization to spindle during meiosis I","synonyms":[{"name":"delayed onset of protein localisation to spindle during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to meiosis I spindle","type":"exact"},{"name":"delayed onset of protein localization to meiotic spindle during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to spindle during first meiotic nuclear division","type":"exact"},{"name":"delayed protein localization to spindle during meiosis I","type":"exact"}],"termid":"FYPO:0005635"}


id: PBO:0058918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7a-1","termid":"PBO:0058918"}


id: PBO:0001172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease Rec12","termid":"PBO:0001172"}


id: PBO:0028601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_nitrosative_stress","termid":"PBO:0028601"}


id: PBO:0031899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane signaling receptor Wsc1 (predicted)","termid":"PBO:0031899"}


id: MONDO:0013363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mesomelic dysplasia, Kantaputra type","termid":"MONDO:0007977"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 2","termid":"MONDO:0016953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"chromosome 2q31.1 duplication syndrome","secondary_identifiers":["OMIM:613681","UMLS:C3150940","DOID:0060458","MEDGEN:462290","Orphanet:294026","GARD:15688"],"synonyms":[{"name":"2q31.1 microduplication syndrome","type":"exact"},{"name":"chromosome 2q31.1 duplication syndrome","type":"exact"},{"name":"dup(2)(q31.1)","type":"exact"},{"name":"mesomelic dysplasia, 2Q31.1 Duplication-related","type":"related"},{"name":"trisomy 2q31.1","type":"exact"}],"termid":"MONDO:0013363","xrefs":{"Monarch":{"xref_id":"0013363"}}}


id: MONDO:0007520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An EEC syndrome characterized by autosomal dominant inheritance that has material basis in variation in the chromosome region 7q11.2-q21.3.","definition_xrefs":["PMID:5454938","DOID:0060784","PMID:1424230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"EEC syndrome","termid":"MONDO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"ectrodactyly, ectodermal dysplasia, and cleft lip-palate syndrome 1","secondary_identifiers":["MESH:C565062","MEDGEN:343663","OMIM:129900","GARD:15063","UMLS:C1851841"],"synonyms":[{"name":"EEC","type":"related"},{"name":"EEC syndrome 1","type":"exact"},{"name":"EEC syndrome-1","type":"exact"},{"name":"EEC1","type":"exact"},{"name":"ectrodactyly, ectodermal dysplasia, and cleft LIP/palate syndrome 1","type":"related"},{"name":"ectrodactyly, ectodermal dysplasia, and cleft lip-palate syndrome type 1","type":"exact"}],"termid":"MONDO:0007520","xrefs":{"Monarch":{"xref_id":"0007520"}}}


id: PBO:0004729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial threonine ammonia-lyase (predicted)","termid":"PBO:0004729"}


id: GO:0036482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a neuron in response to hydrogen peroxide.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0036480"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","synonyms":[{"name":"H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"hydrogen peroxide-induced neuron apoptosis","type":"broad"},{"name":"hydrogen peroxide-induced neuronal apoptosis","type":"broad"},{"name":"neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"}],"termid":"GO:0036482"}


id: PBO:0039835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 5","termid":"PBO:0039835"}


id: MONDO:0016329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial syndrome associated with hypertrophic cardiomyopathy (obsolete MONDO:0016329)","termid":"MONDO:0016329","xrefs":{"Monarch":{"xref_id":"0016329"}}}


id: PR:P40984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SUMO-conjugating enzyme UBC9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00437","PANTHER:PTHR24067:SF32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-conjugating enzyme ubc9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.13","secondary_identifiers":["UniProtKB:P40984"],"synonyms":[{"name":"SUMO protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2I","type":"exact"},{"name":"ubiquitin carrier protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin carrier protein hus5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-conjugating enzyme E2-18 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase hus5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40984"}


id: PBO:0060184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 4, cell surface associated","termid":"PBO:0060184"}


id: MONDO:0021180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired xanthinuria is generally iatrogenic. Allopurinol treatment, administered to block XOR and prevent uric acid overproduction, leads to the accumulation of xanthine. Rarely, in the setting of aggressive chemotherapy with rapid tumor lysis or in patients with HPRT deficiency on allopurinol therapy, complications of renal failure can develop from xanthine crystal nephropathy.","direct_ancestors":[{"relation_name":"is_a","term_name":"xanthinuria","termid":"MONDO:0000721"},{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"acquired xanthinuria","synonyms":[{"name":"acquired xanthinuria","type":"exact"}],"termid":"MONDO:0021180","xrefs":{"Monarch":{"xref_id":"0021180"}}}


id: PBO:0077465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 185A pseudogene 1","termid":"PBO:0077465"}


id: PBO:0073524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 binding domain protein 5 like","termid":"PBO:0073524"}


id: PR:Q9P7V4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein KTI12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01817","PANTHER:PTHR12435:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kti12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30.02c","secondary_identifiers":["UniProtKB:Q9P7V4"],"synonyms":[{"name":"Spom972h-KTI12","type":"exact"}],"termid":"PR:Q9P7V4"}


id: PBO:0079206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressing subtransferable candidate 2 (pseudogene)","termid":"PBO:0079206"}


id: PBO:0027966
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_subtelomeric_heterochromatin","termid":"PBO:0027966"}


id: PBO:0088937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP complex subunit Gar1","termid":"PBO:0088937"}


id: PBO:0049030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 17","termid":"PBO:0049030"}


id: PBO:0017479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of_or_within","termid":"PBO:0017479"}


id: GO:1901038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanidin 3-O-beta-D-glucoside.","definition_xrefs":["GOC:TermGenie","PMID:21899608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside metabolic process","synonyms":[{"name":"cyanidin 3-O-beta-D-glucoside metabolic process","type":"exact"},{"name":"cyanidin 3-O-beta-D-glucoside metabolism","type":"exact"}],"termid":"GO:1901038"}


id: PBO:0003728
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds SRE 5'-[A/T]TCAC[A/C]CAT-3'","termid":"PBO:0003728"}


id: GO:0043800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabino-hex-3-ulose 6-phosphate = beta-D-fructose 6-phosphate.","definition_xrefs":["PMID:11839305","RHEA:25900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"6-phospho-3-hexuloisomerase activity","secondary_identifiers":["EC:5.3.1.27","MetaCyc:R12-RXN"],"synonyms":[{"name":"HUMPI","type":"exact"},{"name":"hexulose-6-phosphate isomerase activity","type":"exact"}],"termid":"GO:0043800"}


id: PBO:0027657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0027657"}


id: PBO:0010136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX dehydratase (predicted)","termid":"PBO:0010136"}


id: GO:0061700
data:
  {"annotated_genes":["SJAG_02424","SJAG_03907","SJAG_04496","SJAG_00209","SJAG_00561"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75100,87807,88097,89201,106366],"is_not":false,"summary":null,"term":"GO:0061700"}]},"cv_name":"cellular_component","definition":"A multiprotein subcomplex of the GATOR complex that regulates TORC1 signaling by interacting with the Rag GTPase. In human, this complex consists of WDR24, WDR59, MIOS, SEH1L, and SEC13. In S. cerevisiae, this complex is referred to as SEACAT and contains the Sea2p, Sea3p, Sea4p, Seh1p, Sec13p proteins.","definition_xrefs":["GOC:krc","GOC:rb","PMID:23723238","PMID:25934700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"Seh1-associated complex","termid":"GO:0035859"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00209":null,"SJAG_00561":null,"SJAG_02424":null,"SJAG_03907":null,"SJAG_04496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GATOR2 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SEACAT complex","type":"exact"}],"termid":"GO:0061700","terms_by_termid":{"GO:0061700":null}}


id: GO:0070241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activated T cell autonomous cell death.","definition_xrefs":["ISBN:0781765196","GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of activated T cell autonomous cell death","termid":"GO:0070239"},{"relation_name":"positively_regulates","term_name":"activated T cell autonomous cell death","termid":"GO:0070238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activated T cell autonomous cell death","synonyms":[{"name":"activation of activated T cell autonomous cell death","type":"narrow"},{"name":"positive regulation of ACAD","type":"broad"},{"name":"positive regulation of activated T cell apoptosis","type":"broad"},{"name":"positive regulation of activated T lymphocyte autonomous cell death","type":"exact"},{"name":"positive regulation of activated T-cell autonomous cell death","type":"exact"},{"name":"positive regulation of activated T-lymphocyte autonomous cell death","type":"exact"},{"name":"positive regulation of activated cell autonomous cell death","type":"broad"},{"name":"stimulation of activated T cell autonomous cell death","type":"narrow"},{"name":"up regulation of activated T cell autonomous cell death","type":"exact"},{"name":"up-regulation of activated T cell autonomous cell death","type":"exact"},{"name":"upregulation of activated T cell autonomous cell death","type":"exact"}],"termid":"GO:0070241"}


id: MONDO:0020608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--ahonen (obsolete MONDO:0020608)","secondary_identifiers":["OMIM:110350"],"synonyms":[{"name":"AN","type":"related"},{"name":"BLOOD GROUP--AHONEN","type":"related"}],"termid":"MONDO:0020608","xrefs":{"Monarch":{"xref_id":"0020608"}}}


id: FYPO:0007444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which macroautophagy is normal (i.e. indistinguishable from wild type) during a cellular response to endoplasmic reticulum stress.","definition_xrefs":["PomBase:mah","PMID:32735772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal macroautophagy","termid":"FYPO:0000385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal macroautophagy during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"normal macroautophagy during cellular response to ER stress","type":"exact"},{"name":"normal macroautophagy during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"normal macroautophagy during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"}],"termid":"FYPO:0007444"}


id: PBO:0051285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-32 (pseudogene)","termid":"PBO:0051285"}


id: PBO:0117091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAB1, TMEM233 and CCDC60 antisense RNA 1","termid":"PBO:0117091"}


id: PBO:0110329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP3S1 pseudogene 1","termid":"PBO:0110329"}


id: PBO:0086226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that functions in the cell wall integrity pathway; functions upstream of Pkc1p; GFP-fusion protein expression is induced in response to the DNA-damaging agent MMS; non-tagged Ack1p is detected in purified mitochondria","termid":"PBO:0086226"}


id: PBO:0086563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR122C is not an essential gene","termid":"PBO:0086563"}


id: PBO:0036403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein modifier, ubiquitin","termid":"PBO:0036403"}


id: GO:0004128
data:
  {"annotated_genes":["SJAG_02395","SJAG_00235","SJAG_02794"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59453,77616,77850],"is_not":false,"summary":null,"term":"GO:0004128"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)H + H+ + 2 ferricytochrome b(5) = NAD(P)+ + 2 ferrocytochrome b(5).","definition_xrefs":["EC:1.6.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_02395":null,"SJAG_02794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cytochrome-b5 reductase activity, acting on NAD(P)H","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["RHEA:46680","MetaCyc:CYTOCHROME-B5-REDUCTASE-RXN","Reactome:R-HSA-198824","Reactome:R-HSA-6806831"],"synonyms":[{"name":"NADH 5alpha-reductase activity","type":"related"},{"name":"NADH-cytochrome b5 reductase activity","type":"related"},{"name":"NADH-cytochrome-b5 reductase activity","type":"related"},{"name":"NADH-ferricytochrome b5 oxidoreductase activity","type":"related"},{"name":"NADH:ferricytochrome-b5 oxidoreductase activity","type":"related"},{"name":"cytochrome b5 reductase activity","type":"related"},{"name":"dihydronicotinamide adenine dinucleotide-cytochrome b5 reductase activity","type":"related"},{"name":"reduced nicotinamide adeninedinucleotide-cytochrome b5 reductase activity","type":"related"}],"termid":"GO:0004128","terms_by_termid":{"GO:0004128":null}}


id: GO:0019469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of octopine (N-(1-carboxy-4-guanidinobutyl)-L-alanine), an amino acid derived opine.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete octopine catabolic process (obsolete GO:0019469)","synonyms":[{"name":"octopine breakdown","type":"exact"},{"name":"octopine catabolism","type":"exact"},{"name":"octopine degradation","type":"exact"}],"termid":"GO:0019469"}


id: GO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of oxaloacetate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete oxaloacetate secondary active transmembrane transporter activity (obsolete GO:0000227)","synonyms":[{"name":"oxaloacetate carrier activity","type":"related"}],"termid":"GO:0000227"}


id: GO:0042618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly-hydroxybutyrate (PHB), a polymer of beta-hydroxybutyrate and a common storage material of prokaryotic cells.","definition_xrefs":["PMID:18640095","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) metabolic process","termid":"GO:1901440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly-hydroxybutyrate metabolic process","synonyms":[{"name":"PHB metabolic process","type":"exact"},{"name":"PHB metabolism","type":"exact"},{"name":"poly-hydroxybutyrate metabolism","type":"exact"}],"termid":"GO:0042618"}


id: FYECO:0000455
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which leucine was completely excluded from the experimental medium/buffer..","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine absent","termid":"FYECO:0000455"}


id: GO:0003372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating mesendodermal cell.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity involved in gastrulation","termid":"GO:0003380"},{"relation_name":"part_of","term_name":"establishment of cell polarity involved in mesendodermal cell migration","termid":"GO:0003369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007163","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"establishment or maintenance of cytoskeleton polarity involved in mesendodermal cell migration","termid":"GO:0003372"}


id: PBO:0060434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAC alpha domain containing","termid":"PBO:0060434"}


id: PBO:0116848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane beta-glucan biosynthesis protein Max1","termid":"PBO:0116848"}


id: GO:0090267
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116467],"is_not":false,"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the mitotic cell cycle spindle assembly checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of spindle checkpoint","termid":"GO:0090232"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle spindle assembly checkpoint","termid":"GO:0090266"},{"relation_name":"positively_regulates","term_name":"mitotic spindle assembly checkpoint signaling","termid":"GO:0007094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0023052","GO:0008150","GO:0044772"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090267","terms_by_termid":{"GO:0090267":null}}


id: GO:0021579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the medulla oblongata is generated and organized. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"},{"relation_name":"part_of","term_name":"hindbrain morphogenesis","termid":"GO:0021575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata morphogenesis","synonyms":[{"name":"medulla morphogenesis","type":"related"},{"name":"myelencephalon morphogenesis","type":"related"}],"termid":"GO:0021579"}


id: MONDO:0024544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Heimler syndrome 1 (obsolete MONDO:0024544)","secondary_identifiers":["DOID:0080623","OMIM:234580"],"synonyms":[{"name":"HEIMLER syndrome 1","type":"related"},{"name":"HMLR1","type":"related"},{"name":"hearing loss, sensorineural, with enamel hypoplasia and nail defects","type":"related"},{"name":"peroxisome biogenesis disorder 1C","type":"related"}],"termid":"MONDO:0024544","xrefs":{"Monarch":{"xref_id":"0024544"}}}


id: GO:1902045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Fas signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:17245429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of Fas signaling pathway","termid":"GO:1902044"},{"relation_name":"negatively_regulates","term_name":"Fas signaling pathway","termid":"GO:0036337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Fas signaling pathway","synonyms":[{"name":"down regulation of Apo-1 signaling pathway","type":"exact"},{"name":"down regulation of CD95 signaling pathway","type":"exact"},{"name":"down regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"down regulation of Fas receptor signaling pathway","type":"exact"},{"name":"down regulation of Fas signaling pathway","type":"exact"},{"name":"down regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"down regulation of FasL signaling pathway","type":"related"},{"name":"down regulation of FasR signaling pathway","type":"exact"},{"name":"down-regulation of Apo-1 signaling pathway","type":"exact"},{"name":"down-regulation of CD95 signaling pathway","type":"exact"},{"name":"down-regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"down-regulation of Fas receptor signaling pathway","type":"exact"},{"name":"down-regulation of Fas signaling pathway","type":"exact"},{"name":"down-regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"down-regulation of FasL signaling pathway","type":"related"},{"name":"down-regulation of FasR signaling pathway","type":"exact"},{"name":"downregulation of Apo-1 signaling pathway","type":"exact"},{"name":"downregulation of CD95 signaling pathway","type":"exact"},{"name":"downregulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"downregulation of Fas receptor signaling pathway","type":"exact"},{"name":"downregulation of Fas signaling pathway","type":"exact"},{"name":"downregulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"downregulation of FasL signaling pathway","type":"related"},{"name":"downregulation of FasR signaling pathway","type":"exact"},{"name":"inhibition of Apo-1 signaling pathway","type":"narrow"},{"name":"inhibition of CD95 signaling pathway","type":"narrow"},{"name":"inhibition of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"inhibition of Fas receptor signaling pathway","type":"narrow"},{"name":"inhibition of Fas signaling pathway","type":"narrow"},{"name":"inhibition of Fas-FasL signaling pathway","type":"narrow"},{"name":"inhibition of FasL signaling pathway","type":"related"},{"name":"inhibition of FasR signaling pathway","type":"narrow"},{"name":"negative regulation of Apo-1 signaling pathway","type":"exact"},{"name":"negative regulation of CD95 signaling pathway","type":"exact"},{"name":"negative regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"negative regulation of Fas receptor signaling pathway","type":"exact"},{"name":"negative regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"negative regulation of FasL signaling pathway","type":"related"},{"name":"negative regulation of FasR signaling pathway","type":"exact"}],"termid":"GO:1902045"}


id: PBO:0078751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 12 homolog","termid":"PBO:0078751"}


id: MONDO:0009025
data:
  {"annotated_genes":["SJAG_01036"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84983],"is_not":false,"summary":null,"term":"MONDO:0009025"}]},"cv_name":"mondo","definition":"Apparent mineralocorticoid excess (AME) is a rare form of pseudohyperaldosteronism characterized by very early-onset and severe hypertension, associated with low renin levels and hypoaldosteronism.","definition_xrefs":["Orphanet:320"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"adrenal gland hyperfunction","termid":"MONDO:0006640"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic hypertension (obsolete MONDO:0015512)","termid":"MONDO:0015512"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"steroid inherited metabolic disorder","termid":"MONDO:0005523"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01036":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"apparent mineralocorticoid excess","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:90983","MESH:D043204","NCIT:C123231","NCIT:C131083","DOID:0090121","MESH:C537422","SCTID:237770005","OMIM:218030","NANDO:2100130","SCTID:703256004","ICD9:255.3","DOID:4367","icd11.foundation:1737310323","NANDO:2200362","UMLS:C0342488","GARD:433"],"synonyms":[{"name":"11 Beta-hydroxysteroid dehydrogenase type 2 deficiency","type":"exact"},{"name":"11-beta-hydroxysteroid dehydrogenase deficiency type 2","type":"exact"},{"name":"AME","type":"related"},{"name":"AME 1","type":"related"},{"name":"APE","type":"exact"},{"name":"Ame1","type":"related"},{"name":"Ulick syndrome","type":"exact"},{"name":"apparent mineralocorticoid EXCESS","type":"related"},{"name":"apparent mineralocorticoid excess","type":"exact"},{"name":"apparent mineralocorticoid excess syndrome","type":"exact"},{"name":"cortisol 11-Beta-ketoreductase deficiency","type":"related"},{"name":"cortisol 11-beta-ketoreductase deficiency","type":"exact"},{"name":"syndrome of apparent mineralocorticoid Excess","type":"exact"}],"termid":"MONDO:0009025","terms_by_termid":{"MONDO:0009025":null},"xrefs":{"Monarch":{"xref_id":"0009025"}}}


id: MONDO:0957594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 87","secondary_identifiers":["OMIM:620500","UMLS:C5882687","DOID:0070586","MEDGEN:1852637"],"termid":"MONDO:0957594","xrefs":{"Monarch":{"xref_id":"0957594"}}}


id: GO:0075084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075084)","synonyms":[{"name":"modulation by host of symbiont transmembrane receptor-mediated cAMP signaling","type":"exact"}],"termid":"GO:0075084"}


id: PBO:0061632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 15","termid":"PBO:0061632"}


id: MONDO:0859567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial dysmorphism, skeletal anomalies, and impaired intellectual development syndrome","termid":"MONDO:0031329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial dysmorphism, skeletal anomalies, and impaired intellectual development syndrome 2","secondary_identifiers":["OMIM:616994","UMLS:C5676895","DOID:0081125","MEDGEN:1803802"],"termid":"MONDO:0859567","xrefs":{"Monarch":{"xref_id":"0859567"}}}


id: PBO:0073889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC12A5 and MMP9 antisense RNA 1","termid":"PBO:0073889"}


id: PBO:0072822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 15","termid":"PBO:0072822"}


id: MONDO:0004997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, chondroid-producing, well-circumscribed, lytic neoplasm usually arising from the epiphysis of long bones. It is characterized by the presence of chondroblasts, osteoclast-like giant cells, chondroid formation, calcification, and mitotic activity. In aggressive cases, there is rearrangement of the 8q21 chromosome band. It occurs most frequently in children and young adults and rarely metastasizes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"benign chondrogenic neoplasm","termid":"MONDO:0024470"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroblastoma","secondary_identifiers":["NANDO:2200051","NCIT:C2945","ONCOTREE:CHBL","GARD:6047","UMLS:C0008441","ICDO:9230/0","EFO:0000331","MEDGEN:40270","MESH:D002804","DOID:2649","HP:0030432"],"synonyms":[{"name":"CHBL","type":"related"},{"name":"chondroblastoma","type":"exact"},{"name":"chondroblastoma (disease)","type":"exact"},{"name":"chondroblastoma of bone","type":"exact"}],"termid":"MONDO:0004997","xrefs":{"Monarch":{"xref_id":"0004997"}}}


id: PBO:0047794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXF2 divergent transcript","termid":"PBO:0047794"}


id: PBO:0054414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1810","termid":"PBO:0054414"}


id: MONDO:1012644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any von Willebrand disease that occurs in pigs and is characterized by no detectable or a severe quantitative deficiency of the glycoprotein von Willebrand factor (vWF) due to a mutation in the VWF gene.","definition_xrefs":["OMIA:001058-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Von Willebrand disease, pig","termid":"MONDO:1011615"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand disease III, pig","termid":"MONDO:1012644","xrefs":{"Monarch":{"xref_id":"1012644"}}}


id: PBO:0076322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNPR antisense RNA 1","termid":"PBO:0076322"}


id: PBO:0083317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF HSE1/YHL002W","termid":"PBO:0083317"}


id: GO:0061533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of norepinephrine by a cell, in which the norepinephrine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norepinephrine secretion","termid":"GO:0048243"},{"relation_name":"is_a","term_name":"catecholamine secretion, neurotransmission","termid":"GO:0160043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"norepinephrine secretion, neurotransmission","synonyms":[{"name":"noradrenaline secretion, neurotransmission","type":"exact"}],"termid":"GO:0061533"}


id: PBO:0058856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8085","termid":"PBO:0058856"}


id: MONDO:0017316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature-deafness-neutrophil dysfunction-dysmorphism syndrome is characterized by short stature, sensorineural deafness, mutism, facial dysmorphism and abnormal neutrophil chemotaxis (leading to recurrent infections).","definition_xrefs":["Orphanet:2866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-deafness-neutrophil dysfunction-dysmorphism syndrome","secondary_identifiers":["SCTID:716192009","MEDGEN:906653","GARD:4841","UMLS:C4274785"],"synonyms":[{"name":"short stature deafness neutrophil dysfunction","type":"related"},{"name":"thong Douglas Ferrante syndrome","type":"related"},{"name":"thong-Douglas-Ferrante syndrome","type":"exact"}],"termid":"MONDO:0017316","xrefs":{"Monarch":{"xref_id":"0017316"}}}


id: MONDO:0019642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypocalcemic vitamin D-resistant rickets (HVDRR) is a hereditary disorder of vitamin D action characterized by hypocalcemia, severe rickets and in many cases alopecia.","definition_xrefs":["Orphanet:93160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypocalcemic rickets","termid":"MONDO:0017323"},{"relation_name":"is_a","term_name":"vitamin D-dependent rickets","termid":"MONDO:0024299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"vitamin D-dependent rickets, type 2","secondary_identifiers":["NANDO:1200783","icd11.foundation:2041886796","MEDGEN:760752","GARD:16805","SCTID:72831007","UMLS:C3536983","ICD10CM:E83.3","NCIT:C131077"],"synonyms":[{"name":"HVDRR","type":"exact"},{"name":"VDDR II","type":"exact"},{"name":"VDDR2","type":"exact"},{"name":"VDRR II","type":"exact"},{"name":"hereditary 1,25 dihydroxyvitamin D-resistant rickets with abnormal Vitamin D receptor","type":"exact"},{"name":"hereditary vitamin D-resistant rickets","type":"exact"},{"name":"hypocalcemic vitamin D-resistant rickets","type":"exact"},{"name":"vitamin D dependent rickets 2","type":"exact"},{"name":"vitamin D receptor deficiency","type":"exact"},{"name":"vitamin D-dependent rickets type II","type":"exact"},{"name":"vitamin D-dependent rickets, type 2","type":"exact"},{"name":"vitamin D-resistant rickets type II","type":"exact"}],"termid":"MONDO:0019642","xrefs":{"Monarch":{"xref_id":"0019642"}}}


id: PBO:0045441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L4 pseudogene 1","termid":"PBO:0045441"}


id: PBO:0013445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec10","termid":"PBO:0013445"}


id: PBO:0011145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, vacuolar sorting protein Vps33","termid":"PBO:0011145"}


id: FYPO:0003737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, begins later than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein phosphorylation during vegetative growth","termid":"FYPO:0002830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein phosphorylation during mitotic G2 phase","synonyms":[{"name":"delayed onset of protein phosphorylation during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"delayed onset of protein phosphorylation during mitotic G2-phase","type":"exact"},{"name":"delayed onset of protein/peptide phosphorylation during mitotic G2 phase","type":"exact"},{"name":"delayed protein phosphorylation during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0003737"}


id: GO:0004381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose = UDP + glycoprotein-alpha-D-galactosyl-(1,3)-(alpha-L-fucosyl-(1,2))-D-galactose.","definition_xrefs":["EC:2.4.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"fucosylgalactoside 3-alpha-galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.37-RXN","Reactome:R-HSA-9034053","Reactome:R-HSA-9033961","RHEA:14349"],"synonyms":[{"name":"B transferase activity","type":"related"},{"name":"UDP-galactose:alpha-L-fucosyl-(1,2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:alpha-L-fucosyl-(1->2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:O-alpha-L-fucosyl(1,2)D-galactose alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:O-alpha-L-fucosyl(1->2)D-galactose alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:alpha-L-fucosyl-(1,2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:alpha-L-fucosyl-(1->2)-D-galactoside 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"[blood group substance] alpha-galactosyltransferase activity","type":"narrow"},{"name":"blood-group substance B-dependent galactosyltransferase activity","type":"narrow"},{"name":"blood-group substance beta-dependent galactosyltransferase activity","type":"narrow"},{"name":"fucosylglycoprotein 3-alpha-galactosyltransferase activity","type":"related"},{"name":"glycoprotein-fucosylgalactoside alpha-galactosyltransferase activity","type":"exact"},{"name":"histo-blood group B transferase activity","type":"narrow"},{"name":"histo-blood substance B-dependent galactosyltransferase activity","type":"related"},{"name":"histo-blood substance beta-dependent galactosyltransferase activity","type":"narrow"}],"termid":"GO:0004381"}


id: PBO:0050975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon related developmental regulator 1","termid":"PBO:0050975"}


id: PBO:0038934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 1B (class I), beta polypeptide","termid":"PBO:0038934"}


id: PBO:0085966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overproduction blocks cell cycle arrest in the presence of mating pheromone; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085966"}


id: PBO:0062068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily B member 1 pseudogene","termid":"PBO:0062068"}


