# terms

id: FYECO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which amorolfine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ amorolfine","synonyms":[{"name":"+ amorolfine","type":"exact"}],"termid":"FYECO:0000424"}


id: PBO:0048915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member J","termid":"PBO:0048915"}


id: MOD:00884
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-2-aminoethylcysteine.","definition_xrefs":["PubMed:1175632","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-aminoethylcysteine (Cys)","synonyms":[{"name":"4-thialysine","type":"exact"},{"name":"L-cysteine aziridine adduct","type":"exact"},{"name":"S-(2-aminoethyl)-L-cysteine","type":"exact"}],"termid":"MOD:00884"}


id: PBO:0024870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar aminopeptidase","termid":"PBO:0024870"}


id: GO:1902091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumagillin biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:23488861","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of fumagillin biosynthetic process","termid":"GO:1902090"},{"relation_name":"negatively_regulates","term_name":"fumagillin biosynthetic process","termid":"GO:1902086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of fumagillin biosynthetic process","synonyms":[{"name":"down regulation of fumagillin anabolism","type":"exact"},{"name":"down regulation of fumagillin biosynthesis","type":"exact"},{"name":"down regulation of fumagillin biosynthetic process","type":"exact"},{"name":"down regulation of fumagillin formation","type":"exact"},{"name":"down regulation of fumagillin synthesis","type":"exact"},{"name":"down-regulation of fumagillin anabolism","type":"exact"},{"name":"down-regulation of fumagillin biosynthesis","type":"exact"},{"name":"down-regulation of fumagillin biosynthetic process","type":"exact"},{"name":"down-regulation of fumagillin formation","type":"exact"},{"name":"down-regulation of fumagillin synthesis","type":"exact"},{"name":"downregulation of fumagillin anabolism","type":"exact"},{"name":"downregulation of fumagillin biosynthesis","type":"exact"},{"name":"downregulation of fumagillin biosynthetic process","type":"exact"},{"name":"downregulation of fumagillin formation","type":"exact"},{"name":"downregulation of fumagillin synthesis","type":"exact"},{"name":"inhibition of fumagillin anabolism","type":"exact"},{"name":"inhibition of fumagillin biosynthesis","type":"exact"},{"name":"inhibition of fumagillin biosynthetic process","type":"narrow"},{"name":"inhibition of fumagillin formation","type":"exact"},{"name":"inhibition of fumagillin synthesis","type":"exact"},{"name":"negative regulation of fumagillin anabolism","type":"exact"},{"name":"negative regulation of fumagillin biosynthesis","type":"exact"},{"name":"negative regulation of fumagillin formation","type":"exact"},{"name":"negative regulation of fumagillin synthesis","type":"exact"}],"termid":"GO:1902091"}


id: MONDO:0008464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Split-hand/foot malformation mapped to chromosome 7q21.3","definition_xrefs":["NCIT:C75045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split hand-foot malformation","termid":"MONDO:0016576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split hand-foot malformation 1","secondary_identifiers":["DECIPHER:46","DOID:0090021","UMLS:C2931019","OMIM:183600","MEDGEN:419314","GARD:7685"],"synonyms":[{"name":"SHFD1","type":"exact"},{"name":"SHFM1","type":"exact"},{"name":"ectrodactyly","type":"related"},{"name":"split hand-foot malformation type 1","type":"exact"},{"name":"split hand/foot malformation 1","type":"exact"},{"name":"split-hand deformity","type":"related"},{"name":"split-hand/foot deformity 1","type":"related"},{"name":"split-hand/foot malformation 1","type":"related"},{"name":"split-hand/foot malformation 1 with or without deafness","type":"related"},{"name":"split-hand/foot malformation type 1","type":"exact"}],"termid":"MONDO:0008464","xrefs":{"Monarch":{"xref_id":"0008464"}}}


id: PBO:0117087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP2R1A antisense RNA 1","termid":"PBO:0117087"}


id: GO:0075082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont transmembrane receptor-mediated signal transduction (obsolete GO:0075082)","termid":"GO:0075082"}


id: GO:0043670
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner layer of the ectexine.","definition_xrefs":["PMID:28904424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ectexine","termid":"GO:0043669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"foot layer","synonyms":[{"name":"nexine 1","type":"exact"}],"termid":"GO:0043670"}


id: PBO:0004175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U18","termid":"PBO:0004175"}


id: GO:0047045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + testosterone = NADPH + H+ + androst-4-ene-3,17-dione.","definition_xrefs":["MetaCyc:1.1.1.64-RXN","EC:1.1.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testosterone dehydrogenase [NAD(P)+] activity","termid":"GO:0030283"},{"relation_name":"is_a","term_name":"17-beta-hydroxysteroid dehydrogenase (NADP+) activity","termid":"GO:0072582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"testosterone 17-beta-dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R01838","RHEA:14981","Wikipedia:Testosterone_17beta-dehydrogenase_(NADP+)"],"synonyms":[{"name":"17-ketoreductase activity","type":"broad"},{"name":"17beta-hydroxysteroid:NADP+ 17-oxidoreductase activity","type":"related"},{"name":"NADP-dependent testosterone-17beta-oxidoreductase activity","type":"related"},{"name":"testosterone 17beta-dehydrogenase (NADP+)","type":"related"}],"termid":"GO:0047045"}


id: GO:0055055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-glucose + H+ = D-glucose + H+. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. D-glucose is the dextrorotatory D-enantiomer of glucose.","definition_xrefs":["GOC:ct"],"gene_count":0,"genotype_count":0,"name":"obsolete glucose:proton symporter activity (obsolete GO:0055055)","synonyms":[{"name":"D-glucose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0055055"}


id: GO:0022625
data:
  {"annotated_genes":["SJAG_01087","SJAG_02121","SJAG_03971","SJAG_02890","SJAG_02312","SJAG_03197","SJAG_00748","SJAG_01580","SJAG_00726","SJAG_04847","SJAG_00749","SJAG_05216","SJAG_00034","SJAG_01551","SJAG_01853","SJAG_02611","SJAG_04304","SJAG_02755","SJAG_04160","SJAG_03919","SJAG_00765","SJAG_02081","SJAG_04066","SJAG_02243","SJAG_03383","SJAG_03122","SJAG_02535","SJAG_00940","SJAG_02891","SJAG_01365","SJAG_00166","SJAG_07014","SJAG_04020","SJAG_03127","SJAG_01721","SJAG_02280","SJAG_02597","SJAG_03423","SJAG_01364","SJAG_01411","SJAG_03364","SJAG_06612","SJAG_02871","SJAG_00384","SJAG_01202","SJAG_05248","SJAG_00537","SJAG_02207","SJAG_04626","SJAG_03326","SJAG_01588","SJAG_03043","SJAG_03133","SJAG_00465","SJAG_07013","SJAG_03666","SJAG_01565","SJAG_01676","SJAG_01322","SJAG_02531","SJAG_02802","SJAG_00629","SJAG_04897","SJAG_01128","SJAG_04414","SJAG_04534","SJAG_02840","SJAG_02546","SJAG_00220","SJAG_01608","SJAG_03335","SJAG_02283","SJAG_03425","SJAG_01194","SJAG_03922","SJAG_00921","SJAG_02510","SJAG_01606","SJAG_04176","SJAG_04478","SJAG_00155","SJAG_01568","SJAG_03159"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58306,67582,69597,69827,69883,70027,70124,70129,70883,70954,70981,70992,71460,71492,71714,71740,71813,71920,71988,71991,72255,72727,72955,73019,73113,73307,73388,73542,73768,73790,73913,73921,73940,74074,74134,74454,74485,74562,74615,75201,75266,75270,75479,75894,76103,76220,76257,76530,76638,76796,76913,77236,77448,77760,77940,77987,78091,78188,78236,78693,78922,79620,79740,79921,80134,87866,90814,90815,90816,94698,94699,96872,96957,98967,105449,105450,111988,111989,114269,114312,114313,116677,117222],"is_not":false,"summary":null,"term":"GO:0022625"}]},"cv_name":"cellular_component","definition":"The large subunit of a ribosome located in the cytosol.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large ribosomal subunit","termid":"GO:0015934"},{"relation_name":"part_of","term_name":"cytosolic ribosome","termid":"GO:0022626"}],"gene_count":83,"genes_by_uniquename":{"SJAG_00034":null,"SJAG_00155":null,"SJAG_00166":null,"SJAG_00220":null,"SJAG_00384":null,"SJAG_00465":null,"SJAG_00537":null,"SJAG_00629":null,"SJAG_00726":null,"SJAG_00748":null,"SJAG_00749":null,"SJAG_00765":null,"SJAG_00921":null,"SJAG_00940":null,"SJAG_01087":null,"SJAG_01128":null,"SJAG_01194":null,"SJAG_01202":null,"SJAG_01322":null,"SJAG_01364":null,"SJAG_01365":null,"SJAG_01411":null,"SJAG_01551":null,"SJAG_01565":null,"SJAG_01568":null,"SJAG_01580":null,"SJAG_01588":null,"SJAG_01606":null,"SJAG_01608":null,"SJAG_01676":null,"SJAG_01721":null,"SJAG_01853":null,"SJAG_02081":null,"SJAG_02121":null,"SJAG_02207":null,"SJAG_02243":null,"SJAG_02280":null,"SJAG_02283":null,"SJAG_02312":null,"SJAG_02510":null,"SJAG_02531":null,"SJAG_02535":null,"SJAG_02546":null,"SJAG_02597":null,"SJAG_02611":null,"SJAG_02755":null,"SJAG_02802":null,"SJAG_02840":null,"SJAG_02871":null,"SJAG_02890":null,"SJAG_02891":null,"SJAG_03043":null,"SJAG_03122":null,"SJAG_03127":null,"SJAG_03133":null,"SJAG_03159":null,"SJAG_03197":null,"SJAG_03326":null,"SJAG_03335":null,"SJAG_03364":null,"SJAG_03383":null,"SJAG_03423":null,"SJAG_03425":null,"SJAG_03666":null,"SJAG_03919":null,"SJAG_03922":null,"SJAG_03971":null,"SJAG_04020":null,"SJAG_04066":null,"SJAG_04160":null,"SJAG_04176":null,"SJAG_04304":null,"SJAG_04414":null,"SJAG_04478":null,"SJAG_04534":null,"SJAG_04626":null,"SJAG_04847":null,"SJAG_04897":null,"SJAG_05216":null,"SJAG_05248":null,"SJAG_06612":null,"SJAG_07013":null,"SJAG_07014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0022626"}],"interesting_parent_ids":["GO:0032991","GO:0022626","GO:0005829","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytosolic large ribosomal subunit","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005842","GO:0030498","GO:0009282","GO:0030872"],"synonyms":[{"name":"50S ribosomal subunit","type":"narrow"},{"name":"60S ribosomal subunit","type":"narrow"},{"name":"eukaryotic ribosomal LSU","type":"narrow"},{"name":"prokaryotic large ribosomal subunit","type":"narrow"}],"termid":"GO:0022625","terms_by_termid":{"GO:0022625":null}}


id: PBO:0089649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery monothiol glutaredoxin Grx3","termid":"PBO:0089649"}


id: PBO:0050317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 19","termid":"PBO:0050317"}


id: GO:0007269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of neurotransmitter from the presynapse into the synaptic cleft via calcium-regulated exocytosis during synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transport","termid":"GO:0006836"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"signal release from synapse","termid":"GO:0099643"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter secretion","secondary_identifiers":["GO:0010554","Reactome:R-HSA-112310"],"synonyms":[{"name":"neurotransmitter release","type":"exact"},{"name":"neurotransmitter secretory pathway","type":"exact"}],"termid":"GO:0007269"}


id: MONDO:0013383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to, 3","secondary_identifiers":["MEDGEN:462324","MESH:C538121","UMLS:C3150974","OMIM:613711"],"synonyms":[{"name":"GDNF Hirschsprung disease","type":"exact"},{"name":"HSCR3","type":"related"},{"name":"Hirschsprung disease caused by mutation in GDNF","type":"exact"},{"name":"Hirschsprung disease modifier","type":"related"},{"name":"Hirschsprung disease type 3","type":"related"},{"name":"Hirschsprung disease, susceptibility to, 3","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to Hirschsprung disease 3","type":"related"}],"termid":"MONDO:0013383","xrefs":{"Monarch":{"xref_id":"0013383"}}}


id: PBO:0026996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_meiosis_I","termid":"PBO:0026996"}


id: FYPO:0006603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the RTS1 barrier (normally located in the mating-type region) occurs to a lower extent than normal.","definition_xrefs":["PMID:26201080","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased replication fork arrest at RTS1 barrier","synonyms":[{"name":"decreased replication fork arrest at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at RTS1 barrier during vegetative growth","type":"exact"},{"name":"decreased replication fork arrest at RTS1 element","type":"exact"},{"name":"reduced replication fork arrest at RTS1 barrier","type":"exact"}],"termid":"FYPO:0006603"}


id: GO:0033867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + Fas-activated serine/threonine protein = ADP + Fas-activated serine/threonine phosphoprotein.","definition_xrefs":["EC:2.7.11.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0004672","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"Fas-activated serine/threonine kinase activity","secondary_identifiers":["MetaCyc:2.7.11.8-RXN"],"synonyms":[{"name":"ATP:Fas-activated serine/threonine protein phosphotransferase activity","type":"related"},{"name":"FAST","type":"related"},{"name":"FASTK","type":"related"},{"name":"STK10","type":"related"}],"termid":"GO:0033867"}


id: GO:0050244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + H+ + O2 + pyruvate = acetyl-CoA + CO2 + H2O2.","definition_xrefs":["RHEA:21912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyruvate oxidase (CoA-acetylating) activity","secondary_identifiers":["EC:1.2.3.6","KEGG_REACTION:R00211","MetaCyc:PYRUVATE-OXIDASE-COA-ACETYLATING-RXN"],"synonyms":[{"name":"pyruvate:oxygen 2-oxidoreductase (CoA-acetylating)","type":"related"}],"termid":"GO:0050244"}


id: PBO:0028517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_present_during_mitosis","termid":"PBO:0028517"}


id: PBO:0067686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal 3","termid":"PBO:0067686"}


id: FYPO:0007790
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01680:allele-2":{"allele_type":"amino_acid_mutation","description":"P470L","gene_uniquename":"SJAG_01680","name":"chk1-P470L","synonyms":[{"name":"chk1- hyperactive (chk1-hyp)","reference":"PMID:23090706","type":"exact"},{"name":"chk1-hyperactive (chk1-hyp)","reference":"PMID:20368354","type":"exact"}],"uniquename":"SJAG_01680:allele-2"},"SJAG_02266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02266","name":"rad24delta","uniquename":"SJAG_02266:allele-1"},"SJAG_02486:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02486","name":"ste6delta","uniquename":"SJAG_02486:allele-1"},"SJAG_04287:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04287","name":"cds1delta","uniquename":"SJAG_04287:allele-1"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119142],"is_not":false,"summary":null,"term":"FYPO:0007790"}],"single_locus_phenotype":[{"annotations":[118931,119122,119123,119132,119139],"is_not":false,"summary":null,"term":"FYPO:0007790"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which hyphal growth is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:31150379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"biological process phenotype","termid":"FYPO:0000300"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null,"SJAG_01680":null,"SJAG_02266":null,"SJAG_02486":null,"SJAG_04287":null,"SJAG_04671":null},"genotype_count":6,"genotypes_by_uniquename":{"cds1delta":{"display_name":"cds1delta","display_uniquename":"cds1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04287:allele-1","expression":"Null"}]}]},"chk1-P470L-P470L-amino_acid_mutation-expression-not_assayed_or_wild_type__rad24delta":{"display_name":"chk1-P470L(aa) rad24delta","display_uniquename":"chk1-P470L-P470L-amino_acid_mutation-expression-not_assayed_or_wild_type__rad24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-2","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02266:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"ste6delta":{"display_name":"ste6delta","display_uniquename":"ste6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02486:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02266","SJAG_01680"],"name":"normal hyphal growth","references_by_uniquename":{"PMID:23090706":null,"PMID:29566183":null,"PMID:31150379":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04671","SJAG_01355","SJAG_04287","SJAG_00601","SJAG_02486"],"single_locus_genotype_uniquenames":["ste6delta","mrc1delta","cds1delta","cox6delta","rip1delta"],"synonyms":[{"name":"hyphal growth abolished","type":"exact"}],"termid":"FYPO:0007790","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000015":null,"FYECO:0000137":null,"FYPO:0007790":null}}


id: PBO:0056401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPT antisense RNA 1","termid":"PBO:0056401"}


id: GO:0009806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lignans, any member of a class of plant metabolites related to lignins. Lignans are usually found as phenylpropanoid dimers in which the phenylpropanoid units are linked tail to tail and thus having a 2,3 dibenzylbutane skeleton, but higher oligomers can also exist.","definition_xrefs":["GOC:jl","PMID:10074466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignan metabolic process","synonyms":[{"name":"lignan metabolism","type":"exact"}],"termid":"GO:0009806"}


id: MONDO:0003513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature or immature teratoma that arises from the stomach.","definition_xrefs":["NCIT:C5259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"},{"relation_name":"is_a","term_name":"gastric neoplasm","termid":"MONDO:0021085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric teratoma","secondary_identifiers":["DOID:5561","MEDGEN:272665","UMLS:C1333790"],"synonyms":[{"name":"gastric teratoma","type":"exact"},{"name":"stomach teratoma","type":"exact"},{"name":"teratoma of stomach","type":"exact"},{"name":"teratoma of the stomach","type":"exact"}],"termid":"MONDO:0003513","xrefs":{"Monarch":{"xref_id":"0003513"}}}


id: MONDO:0958197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leber hereditary optic neuropathy, autosomal recessive","termid":"MONDO:0030309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"Leber-like hereditary optic neuropathy, autosomal recessive 2","secondary_identifiers":["MEDGEN:1845294","UMLS:C5882713","OMIM:620569"],"termid":"MONDO:0958197","xrefs":{"Monarch":{"xref_id":"0958197"}}}


id: PBO:0016901
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snu2 transcription termination requires hairpin structure cleaved by Pac1","termid":"PBO:0016901"}


id: GO:0070896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transposon integration, a process in which a transposable element is incorporated into another DNA molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposon integration (obsolete GO:0070896)","synonyms":[{"name":"activation of transposon integration","type":"narrow"},{"name":"stimulation of transposon integration","type":"narrow"},{"name":"up regulation of transposon integration","type":"exact"},{"name":"up-regulation of transposon integration","type":"exact"},{"name":"upregulation of transposon integration","type":"exact"}],"termid":"GO:0070896"}


id: PBO:0078689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 2-2","termid":"PBO:0078689"}


id: PBO:0012271
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdr1-related transcription factor","termid":"PBO:0012271"}


id: MONDO:0000566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete substance withdrawal disorder (obsolete MONDO:0000566)","termid":"MONDO:0000566","xrefs":{"Monarch":{"xref_id":"0000566"}}}


id: PBO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NST UDP-galactose transporter (predicted)","termid":"PBO:0000286"}


id: FYPO:0003159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP (cAMP) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular cAMP level","termid":"FYPO:0001660"},{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"cAMP absent from cell","synonyms":[{"name":"cyclic AMP absent from cell","type":"exact"}],"termid":"FYPO:0003159"}


id: GO:1900478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of sulfate assimilation by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:7601277","PMID:7891681"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900478)","synonyms":[{"name":"activation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of sulphate assimilation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:1900478"}


id: PBO:0068594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 45, pseudogene","termid":"PBO:0068594"}


id: MONDO:1012491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lethal arthrogryposis syndrome, non-human animal","termid":"MONDO:1011968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal arthrogryposis syndrome, cattle","secondary_identifiers":["OMIA:001953-9913"],"termid":"MONDO:1012491","xrefs":{"Monarch":{"xref_id":"1012491"}}}


id: FYPO:0003210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum that is in an abnormal location and is not perpendicular to the long axis of the cell. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"misoriented septum during vegetative growth","termid":"FYPO:0001390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000138","FYPO:0000032","FYPO:0001320"],"is_obsolete":false,"name":"mislocalized, misoriented septum","synonyms":[{"name":"abnormal septum localization and orientation","type":"related"},{"name":"abnormal septum location and orientation","type":"exact"},{"name":"abnormal septum position and orientation","type":"exact"},{"name":"abnormal septum positioning and orientation","type":"related"},{"name":"asymmetric, misoriented septum","type":"exact"},{"name":"asymmetrically located, misoriented septum","type":"exact"},{"name":"mislocalised, misoriented septum","type":"exact"},{"name":"mislocalized, misoriented septum during mitotic cell cycle","type":"related"},{"name":"mislocalized, misoriented septum during vegetative growth","type":"exact"},{"name":"misplaced, misoriented septum","type":"exact"}],"termid":"FYPO:0003210"}


id: FYPO:0005881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ophthalmic acid measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"ophthalmic acid absent from cell","synonyms":[{"name":"ophthalmic acid absent from cell during mitotic cell cycle","type":"related"},{"name":"ophthalmic acid absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0005881"}


id: GO:0004347
data:
  {"annotated_genes":["SJAG_00839"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69906],"is_not":false,"summary":null,"term":"GO:0004347"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 6-phosphate = beta-D-fructose 6-phosphate.","definition_xrefs":["RHEA:11816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00839":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"glucose-6-phosphate isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PGLUCISOM-RXN","EC:5.3.1.9","Reactome:R-HSA-70471","Reactome:R-HSA-70475"],"synonyms":[{"name":"D-glucose-6-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-glucose-6-phosphate ketol-isomerase activity","type":"related"},{"name":"glucose phosphate isomerase activity","type":"related"},{"name":"hexose monophosphate isomerase activity","type":"broad"},{"name":"hexose phosphate isomerase activity","type":"related"},{"name":"hexosephosphate isomerase activity","type":"broad"},{"name":"oxoisomerase activity","type":"related"},{"name":"phosphoglucoisomerase activity","type":"related"},{"name":"phosphoglucose isomerase activity","type":"related"},{"name":"phosphohexoisomerase activity","type":"broad"},{"name":"phosphohexomutase activity","type":"broad"},{"name":"phosphohexose isomerase activity","type":"broad"},{"name":"phosphosaccharomutase activity","type":"broad"}],"termid":"GO:0004347","terms_by_termid":{"GO:0004347":null}}


id: PBO:0072342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 28","termid":"PBO:0072342"}


id: GO:1990166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, a region of a chromosome at which a DNA double-strand break has occurred.","definition_xrefs":["GOC:mah","PMID:23080121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to site of double-strand break","synonyms":[{"name":"protein localisation to site of double-strand break","type":"exact"},{"name":"protein localization to double-strand break site","type":"exact"},{"name":"protein localization to site of DSB","type":"exact"}],"termid":"GO:1990166"}


id: SO:0001306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methylthio_N6_threonyl_carbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methylthio_N6_threonyl_carbamoyladenosine","secondary_identifiers":["RNAMOD:012"],"synonyms":[{"name":"2-methylthio-N6-threonyl carbamoyladenosine","type":"exact"},{"name":"ms2t6A","type":"exact"},{"name":"two methylthio N6 threonyl carbamoyladenosine","type":"exact"}],"termid":"SO:0001306"}


id: MONDO:0012061
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859173"}]},"cv_name":"mondo","definition":"Sick sinus syndrome is a rare cardiac rhythm disease, usually of the elderly, characterized by electrocardiographic findings of sinus bradycardia, atrial fibrillation, atrial tachycardia sinus arrest, or sino-atrial block, and that manifest with symptoms like syncope, dizziness, palpitations, fatigue, or even heart failure. It results from malfunction of the cardiac conduction system, probably secondary to degenerative fibrosis of nodal tissue in the elderly or secondary to cardiac disorders in younger patients.","definition_xrefs":["Orphanet:166282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sick sinus syndrome","termid":"MONDO:0001823"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial sick sinus syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C563907","MEDGEN:573766","OMIMPS:608567","icd11.foundation:1495462959","UMLS:C0340491","SCTID:233913007","MedDRA:10040639","GARD:13663"],"synonyms":[{"name":"SSS1","type":"related"},{"name":"familial sinus node dysfunction","type":"exact"},{"name":"hereditary sick sinus syndrome","type":"exact"},{"name":"sick sinus syndrome 1, autosomal recessive","type":"related"}],"termid":"MONDO:0012061","terms_by_termid":{"MONDO:0859173":null},"xrefs":{"Monarch":{"xref_id":"0012061"}}}


id: GO:0051899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which membrane potential decreases with respect to its steady-state potential, usually from negative potential to a more positive potential. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative steady-state resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:dh","Wikipedia:Depolarization"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization","secondary_identifiers":["Reactome:R-HSA-112308"],"termid":"GO:0051899"}


id: PBO:0081971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RANBP2-type containing 3","termid":"PBO:0081971"}


id: PBO:0045622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 34 (pseudogene)","termid":"PBO:0045622"}


id: GO:0098849
data:
  {"annotated_genes":["SJAG_04516","SJAG_02599","SJAG_01351","SJAG_01344","SJAG_03497","SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70628,93107,96809,96847,108228,117998],"is_not":false,"summary":null,"term":"GO:0098849"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of cadmium cations in a cell. These include transport of cadmium cations away from sensitive areas and to compartments or complexes whose purpose is sequestration.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of cadmium ion","termid":"GO:0071585"},{"relation_name":"is_a","term_name":"cellular detoxification of metal ion","termid":"GO:0140961"},{"relation_name":"part_of","term_name":"cellular response to cadmium ion","termid":"GO:0071276"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular detoxification of cadmium ion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098849","terms_by_termid":{"GO:0098849":null}}


id: GO:0030030
data:
  {"annotated_genes":["SJAG_02989","SJAG_01894","SJAG_01993","SJAG_03453","SJAG_02700","SJAG_02379","SJAG_02864","SJAG_01943","SJAG_01794","SJAG_04509","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92309,98781,98089,98699,88047,114110],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[89656,93278,87685,111159,90641],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon.","definition_xrefs":["GOC:jl","GOC:mah","PMID:16318917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02379":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell projection organisation","type":"exact"},{"name":"cell projection organization and biogenesis","type":"related"},{"name":"cell surface structure organization and biogenesis","type":"related"}],"termid":"GO:0030030","terms_by_termid":{"GO:1902917":null,"GO:1904600":null}}


id: GO:1900818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ochratoxin A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"ochratoxin A metabolic process","termid":"GO:1900816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ochratoxin A biosynthetic process","synonyms":[{"name":"Ochratoxin A anabolism","type":"exact"},{"name":"Ochratoxin A biosynthesis","type":"exact"},{"name":"Ochratoxin A formation","type":"exact"},{"name":"Ochratoxin A synthesis","type":"exact"}],"termid":"GO:1900818"}


id: GO:0048071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in one sex that is not observed in the other sex.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"developmental pigmentation","termid":"GO:0048066"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex-specific pigmentation","termid":"GO:0048071"}


id: PBO:0050588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein 1","termid":"PBO:0050588"}


id: GO:1902531
data:
  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of intracellular signal transduction","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0010627"],"synonyms":[{"name":"regulation of intracellular protein kinase cascade","type":"narrow"},{"name":"regulation of intracellular signal transduction pathway","type":"narrow"},{"name":"regulation of intracellular signaling cascade","type":"exact"},{"name":"regulation of intracellular signaling chain","type":"exact"},{"name":"regulation of intracellular signaling pathway","type":"related"},{"name":"regulation of signal transduction via intracellular signaling cascade","type":"related"},{"name":"regulation of signal transmission via intracellular 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id: PBO:0082847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-binding protein of the mitochondrial intermembrane space; evolutionarily conserved; may be involved in delivering copper from the matrix to the cytochrome c oxidase complex; contains a twin CX9C motif","termid":"PBO:0082847"}


id: GO:0097227
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The ring-like, filamentous structure located at the distal end of the midpiece of the sperm flagellum; the annulus is thought to form a diffusion barrier between the midpiece and the principal piece and serve as a stabilizing structure for tail rigidity.","definition_xrefs":["GOC:cjm","MP:0009834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm annulus","termid":"GO:0097227"}


id: MONDO:0006187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the glandular epithelium of the duodenum. It is characterized by a villous architectural pattern. The neoplastic glandular cells have dysplastic features.","definition_xrefs":["NCIT:C5338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"villous adenoma","termid":"MONDO:0000502"},{"relation_name":"is_a","term_name":"adenoma of small intestine","termid":"MONDO:0021303"},{"relation_name":"is_a","term_name":"tumor of duodenum","termid":"MONDO:0021375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenal villous adenoma","secondary_identifiers":["DOID:0050927","MEDGEN:232438","UMLS:C1333322","EFO:1000225"],"synonyms":[{"name":"duodenal villous adenoma","type":"exact"},{"name":"duodenum adenoma","type":"related"},{"name":"duodenum villous adenoma","type":"exact"},{"name":"villous adenoma of duodenum","type":"exact"},{"name":"villous adenoma of the duodenum","type":"exact"},{"name":"villous adenoma, duodenum","type":"exact"}],"termid":"MONDO:0006187","xrefs":{"Monarch":{"xref_id":"0006187"}}}


id: GO:0021678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the third ventricle over time, from its formation to the mature structure. The third ventricle is the narrow cleft inferior to the corpus callosum, within the diencephalon, between the paired thalami. Its floor is formed by the hypothalamus, its anterior wall by the lamina terminalis, and its roof by ependyma, and it communicates with the fourth ventricle by the cerebral aqueduct, and with the lateral ventricles by the interventricular foramina.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"ventricular system development","termid":"GO:0021591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"third ventricle development","termid":"GO:0021678"}


id: PBO:0082151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyltransferase that converts diacylglycerol to triacylglycerol (TGA); one of several acyltransferases that contribute to TGA synthesis; relocates from ER to nuclear membrane in response cell cycle and starvation signals; Lro1p and Dga1p can O-acylate ceramides; putative homolog of human lecithin cholesterol acyltransferase","termid":"PBO:0082151"}


id: GO:0072225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric late distal convoluted tubule over time, from its formation to the mature structure. The metanephric late distal convoluted tubule contains metanephric DCT cells and intercalated (IC) alpha and beta cells and is vasopressin-sensitive.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late distal convoluted tubule development","termid":"GO:0072068"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric late distal convoluted tubule development","termid":"GO:0072225"}


id: MONDO:0003529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sudden onset pyelonephritis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyelonephritis","termid":"MONDO:0006939"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"acute pyelonephritis","secondary_identifiers":["NCIT:C123215","ICD10CM:N10","SCTID:36689008","icd11.foundation:441183088","DOID:559","ICD9:590.1","MEDGEN:636072","UMLS:C0520575"],"synonyms":[{"name":"pyelonephritis, acute","type":"exact"}],"termid":"MONDO:0003529","xrefs":{"Monarch":{"xref_id":"0003529"}}}


id: PBO:0057674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1265","termid":"PBO:0057674"}


id: GO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a pre-B cell. Pre-B cells follow the pro-B cell stage of immature B cell differentiation and undergo rearrangement of heavy chain V, D, and J gene segments.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature B cell differentiation","termid":"GO:0002327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pre-B cell differentiation","synonyms":[{"name":"pre-B cell development","type":"related"},{"name":"pre-B lymphocyte differentiation","type":"exact"}],"termid":"GO:0002329"}


id: GO:0052646
data:
  {"annotated_genes":["SJAG_01012","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62724,68830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alditol phosphates, any phosphorylated polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.","definition_xrefs":["PMID:30240188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alditol phosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"alditol phosphate metabolism","type":"exact"}],"termid":"GO:0052646","terms_by_termid":{"GO:0046168":null}}


id: GO:0052863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-deoxy-D-xylulose 5-phosphate, the 5-phospho derivative of 1-deoxy-D-xylulose. 1-deoxy-D-xylulose 5-phosphate is an intermediate in the non-mevalonate pathway and a common precursor for isoprenoid, thiamin, and pyridoxol biosynthesis.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1-deoxy-D-xylulose 5-phosphate metabolic process","synonyms":[{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate metabolic process","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate metabolism","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate metabolism","type":"exact"}],"termid":"GO:0052863"}


id: GO:0097479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a synaptic vesicle or vesicles are transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle localization","synonyms":[{"name":"establishment and maintenance of synaptic vesicle localization","type":"exact"},{"name":"establishment and maintenance of synaptic vesicle position","type":"exact"},{"name":"synaptic vesicle localisation","type":"exact"}],"termid":"GO:0097479"}


id: MONDO:0000076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuropathy, hereditary sensory and autonomic (obsolete MONDO:0000076)","termid":"MONDO:0000076","xrefs":{"Monarch":{"xref_id":"0000076"}}}


id: GO:0071702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of organic substances into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore. An organic substance is a molecular entity that contains carbon.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance transport (obsolete GO:0071702)","termid":"GO:0071702"}


id: PBO:0050288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNF1A antisense RNA 1","termid":"PBO:0050288"}


id: PBO:0003646
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDG-Ii","termid":"PBO:0003646"}


id: PBO:0082737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3S histone deacetylase complex; Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3; plays a role in regulating Ty1 transposition","termid":"PBO:0082737"}


id: PBO:0027720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_acetylation","termid":"PBO:0027720"}


id: SO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet consisting of two H-bonds in which: the main-chain NH of residue(i) is H-bonded to the main-chain CO of residue(i+5), the main-chain CO of residue i is H-bonded to the main-chain NH of residue(i+4), these loops have an RL nest at residues i+3 and i+4.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_bulge_loop","termid":"SO:0001108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge_loop_six","secondary_identifiers":["BS:00211"],"synonyms":[{"name":"beta bulge loop six","type":"exact"}],"termid":"SO:0001110"}


id: GO:0061659
data:
  {"annotated_genes":["SJAG_01165","SJAG_04990","SJAG_01992","SJAG_01360","SJAG_00727","SJAG_01900","SJAG_04619","SJAG_02521","SJAG_02299","SJAG_03970","SJAG_03324","SJAG_00173","SJAG_01637","SJAG_02415","SJAG_01212","SJAG_00208","SJAG_02652","SJAG_02575","SJAG_00475","SJAG_01776","SJAG_04309","SJAG_03615","SJAG_05236","SJAG_00209","SJAG_02169","SJAG_03657","SJAG_01533","SJAG_00111","SJAG_03883","SJAG_00341","SJAG_03112","SJAG_04966","SJAG_01593","SJAG_02347","SJAG_00188","SJAG_05274","SJAG_03175","SJAG_04783","SJAG_02371","SJAG_03860","SJAG_04429","SJAG_02685","SJAG_02603","SJAG_03136","SJAG_00435","SJAG_00819","SJAG_01253","SJAG_04600","SJAG_03191","SJAG_02308","SJAG_03250","SJAG_02746","SJAG_01772","SJAG_01535","SJAG_02319","SJAG_04915","SJAG_03618","SJAG_00561","SJAG_03006","SJAG_05264","SJAG_02668","SJAG_00509","SJAG_03968","SJAG_06309","SJAG_00500","SJAG_00552","SJAG_04151","SJAG_01854","SJAG_01561","SJAG_03613","SJAG_05323","SJAG_03005","SJAG_03831","SJAG_02851","SJAG_01507"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91301,104680,106991,113427],"is_not":false,"summary":null,"term":"GO:0061659"},{"annotations":[71879,110071,109567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019776"},{"annotations":[116003,118641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[94146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"},{"annotations":[72237,72183,104155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061665"},{"annotations":[75350,118233,104156,114114,64277,103203,75198,79155,79690,88425,113188,112610,116496,117039,74027,105044,75948,99199,72688,58309,73352,100060,77973,89510,63006,109764,72594,76369,116999,72927,65396,103218,87814,77309,93371,74024,69063,77274,65595,96581,98337,87804,74091,88100,89577,102820,106754,75173,60999,78525,78904,71634,111880,71178,107801,71770,89996,101110,109434,78495,90523,116497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061630"},{"annotations":[74653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin-like protein (ULP) to a substrate protein via the reaction X-ULP + S = X + S-ULP, where X is either an E2 or E3 enzyme, the X-ULP linkage is a thioester bond, and the S-ULP linkage is an isopeptide bond between the C-terminal glycine of ULP and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":75,"genes_by_uniquename":{"SJAG_00111":null,"SJAG_00173":null,"SJAG_00188":null,"SJAG_00208":null,"SJAG_00209":null,"SJAG_00341":null,"SJAG_00435":null,"SJAG_00475":null,"SJAG_00500":null,"SJAG_00509":null,"SJAG_00552":null,"SJAG_00561":null,"SJAG_00727":null,"SJAG_00819":null,"SJAG_01165":null,"SJAG_01212":null,"SJAG_01253":null,"SJAG_01360":null,"SJAG_01507":null,"SJAG_01533":null,"SJAG_01535":null,"SJAG_01561":null,"SJAG_01593":null,"SJAG_01637":null,"SJAG_01772":null,"SJAG_01776":null,"SJAG_01854":null,"SJAG_01900":null,"SJAG_01992":null,"SJAG_02169":null,"SJAG_02299":null,"SJAG_02308":null,"SJAG_02319":null,"SJAG_02347":null,"SJAG_02371":null,"SJAG_02415":null,"SJAG_02521":null,"SJAG_02575":null,"SJAG_02603":null,"SJAG_02652":null,"SJAG_02668":null,"SJAG_02685":null,"SJAG_02746":null,"SJAG_02851":null,"SJAG_03005":null,"SJAG_03006":null,"SJAG_03112":null,"SJAG_03136":null,"SJAG_03175":null,"SJAG_03191":null,"SJAG_03250":null,"SJAG_03324":null,"SJAG_03613":null,"SJAG_03615":null,"SJAG_03618":null,"SJAG_03657":null,"SJAG_03831":null,"SJAG_03860":null,"SJAG_03883":null,"SJAG_03968":null,"SJAG_03970":null,"SJAG_04151":null,"SJAG_04309":null,"SJAG_04429":null,"SJAG_04600":null,"SJAG_04619":null,"SJAG_04783":null,"SJAG_04915":null,"SJAG_04966":null,"SJAG_04990":null,"SJAG_05236":null,"SJAG_05264":null,"SJAG_05274":null,"SJAG_05323":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0019787","GO:0140096","GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"ubiquitin-like protein ligase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"E3","type":"related"},{"name":"small conjugating protein ligase activity","type":"exact"}],"termid":"GO:0061659","terms_by_termid":{"GO:0019776":null,"GO:0034450":null,"GO:0061630":null,"GO:0061659":null,"GO:0061665":null,"GO:0140850":null,"GO:0140851":null}}


id: PBO:0062851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTOA pseudogene 1","termid":"PBO:0062851"}


id: PBO:0056236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI2 antisense RNA 3","termid":"PBO:0056236"}


id: PR:Q9USR4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec27 gene.","definition_xrefs":["UniProtKB:Q9USR4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.05c","synonyms":[{"name":"Spom972h-rec27","type":"exact"},{"name":"meiotically up-regulated gene 41 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USR4"}


id: PBO:0067911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 213","termid":"PBO:0067911"}


id: GO:0103035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3 H+ + methyl-1,4-benzoquinone + NADPH = methyl-1,4-benzoquinol + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH:methyl-1,4-benzoquinone oxidoreductase activity (obsolete GO:0103035)","termid":"GO:0103035"}


id: MOD:00933
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative - 5-hydro-5-methylimidazol-4-one, arginine methylglyoxal arginine adduct (+54 amu)","definition_xrefs":["Unimod:319#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C3-H2-O adduct (+54 amu) of malondialdehyde with lysine or methylglyoxal with arginine.","termid":"MOD:00630"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylglyoxal arginine adduct (+54 amu)","synonyms":[{"name":"Delta:H(2)C(3)O(1)","type":"related"},{"name":"MDA adduct +54","type":"related"}],"termid":"MOD:00933"}


id: MONDO:0013955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency in which the cause of the disease is a mutation in the IL12RB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mendelian susceptibility to mycobacterial diseases due to complete IL12RB1 deficiency","secondary_identifiers":["DOID:0111990","OMIM:614891","Orphanet:319552","MEDGEN:862386","UMLS:C4013949"],"synonyms":[{"name":"IL-12Râ1 deficiency","type":"related"},{"name":"IL12RB1 autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency","type":"exact"},{"name":"IL12RB1 deficiency","type":"related"},{"name":"IMD30","type":"related"},{"name":"MSMD due to complete IL12RB1 deficiency","type":"exact"},{"name":"MSMD due to complete interleukin 12 receptor beta 1 deficiency","type":"exact"},{"name":"Mendelian susceptibility to interleukin 12 receptor beta 1 deficiency","type":"exact"},{"name":"Mendelian susceptibility to mycobacterial infections due to IL12 deficiency","type":"related"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency caused by mutation in IL12RB1","type":"exact"},{"name":"immunodeficiency 30","type":"related"},{"name":"immunodeficiency type 30","type":"exact"}],"termid":"MONDO:0013955","xrefs":{"Monarch":{"xref_id":"0013955"}}}


id: GO:0032401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a melanosome to a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of pigment granule localization","termid":"GO:0051905"},{"relation_name":"part_of","term_name":"melanosome localization","termid":"GO:0032400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of melanosome localization","synonyms":[{"name":"establishment of melanosome localisation","type":"exact"}],"termid":"GO:0032401"}


id: GO:0051139
data:
  {"annotated_genes":["SJAG_04028","SJAG_01541","SJAG_04698","SJAG_04096","SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70012,90997,78238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[90998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[79896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"},{"annotations":[77916,79895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: metal ion(in) + H+(out) = metal ion(out) + H+(in).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"metal cation:monoatomic cation antiporter activity","termid":"GO:0140828"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04616":null,"SJAG_04698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"metal cation:proton antiporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-435171"],"synonyms":[{"name":"metal ion:hydrogen antiporter activity","type":"exact"},{"name":"metal ion:proton antiporter activity","type":"exact"}],"termid":"GO:0051139","terms_by_termid":{"GO:0010486":null,"GO:0015369":null,"GO:0015385":null,"GO:0015386":null}}


id: PBO:0017691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein Sgd1 (predicted)","termid":"PBO:0017691"}


id: PBO:0089194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein","termid":"PBO:0089194"}


id: PBO:0040249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 4D cysteine peptidase","termid":"PBO:0040249"}


id: GO:0060763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic growth of the large, club-shaped terminal end of a mammary gland duct during prepubertal growth and during puberty.","definition_xrefs":["PMID:10804170","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary duct terminal end bud growth","termid":"GO:0060763"}


id: PBO:0070288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 29","termid":"PBO:0070288"}


id: PBO:0088694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32","termid":"PBO:0088694"}


id: PBO:0079135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin associated factor X","termid":"PBO:0079135"}


id: PBO:0003817
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains IDP (GATA)","termid":"PBO:0003817"}


id: FYPO:0002801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein degradation is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation","termid":"FYPO:0002799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein degradation during nitrogen starvation","synonyms":[{"name":"normal protein breakdown during nitrogen starvation","type":"exact"},{"name":"normal protein catabolic process during nitrogen starvation","type":"exact"},{"name":"normal protein catabolism during nitrogen starvation","type":"exact"},{"name":"normal protein degradation during nitrogen depletion","type":"exact"},{"name":"normal protein degradation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002801"}


id: PBO:0078699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 1-2","termid":"PBO:0078699"}


id: PBO:0065642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 20C, pseudogene","termid":"PBO:0065642"}


id: PBO:0054043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1381","termid":"PBO:0054043"}


id: MONDO:0017696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to glycogen branching enzyme deficiency","termid":"MONDO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease due to glycogen branching enzyme deficiency, non progressive hepatic form","secondary_identifiers":["UMLS:C1856302","GARD:17395","NANDO:2201160","MEDGEN:344701","Orphanet:308638"],"synonyms":[{"name":"GBE deficiency, non progressive hepatic form","type":"exact"},{"name":"GSD due to glycogen branching enzyme deficiency, non progressive hepatic form","type":"exact"},{"name":"GSD type 4, non progressive hepatic form","type":"exact"},{"name":"GSDIV, non progressive hepatic form","type":"exact"},{"name":"glycogen storage disease type 4, non progressive hepatic form","type":"exact"},{"name":"glycogen storage disease type IV, non progressive hepatic form","type":"exact"},{"name":"glycogenosis due to glycogen branching enzyme deficiency, non progressive hepatic form","type":"exact"},{"name":"glycogenosis type 4, non progressive hepatic form","type":"exact"},{"name":"glycogenosis type IV, non progressive hepatic form","type":"exact"}],"termid":"MONDO:0017696","xrefs":{"Monarch":{"xref_id":"0017696"}}}


id: MONDO:1011490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complement component 6 deficiency that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement component 6 deficiency, non-human animal","termid":"MONDO:1011423"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 6 deficiency, rabbit","secondary_identifiers":["OMIA:001624-9986"],"synonyms":[{"name":"C6 deficiency, rabbit","type":"exact"}],"termid":"MONDO:1011490","xrefs":{"Monarch":{"xref_id":"1011490"}}}


id: PBO:0056978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 29b-2","termid":"PBO:0056978"}


id: PBO:0073248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 2","termid":"PBO:0073248"}


id: GO:0031942
data:
  {"annotated_genes":["SJAG_01816","SJAG_00354"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76962,118525],"is_not":false,"summary":null,"term":"GO:0031942"}]},"cv_name":"cellular_component","definition":"Protease complex of the mitochondrial inner membrane whose catalytic residues lie on the intermembrane space side of the inner membrane; involved in mitochondrial protein turnover. Contains a subunit belonging to the AAA family of ATP-dependent metalloproteases.","definition_xrefs":["PMID:16267274","PMID:16247555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00354":null,"SJAG_01816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"i-AAA complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031942","terms_by_termid":{"GO:0031942":null}}


id: MONDO:0014591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant Robinow syndrome in which the cause of the disease is a mutation in the DVL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Robinow syndrome","termid":"MONDO:0008389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Robinow syndrome 2","secondary_identifiers":["DOID:0060765","UMLS:C4225363","MEDGEN:897039","OMIM:616331","GARD:18548"],"synonyms":[{"name":"DRS2","type":"exact"},{"name":"DVL1 autosomal dominant Robinow syndrome","type":"exact"},{"name":"Robinow syndrome, autosomal dominant 2","type":"related"},{"name":"Robinow syndrome, autosomal dominant type 2","type":"exact"},{"name":"autosomal dominant Robinow syndrome caused by mutation in DVL1","type":"exact"},{"name":"autosomal dominant Robinow syndrome type 2","type":"exact"}],"termid":"MONDO:0014591","xrefs":{"Monarch":{"xref_id":"0014591"}}}


id: PBO:0081241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF8-ERVK3-1 readthrough (NMD candidate)","termid":"PBO:0081241"}


id: GO:0061358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a Wnt protein from a cell.","definition_xrefs":["GOC:bf","PMID:19223472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of Wnt protein secretion","termid":"GO:0061356"},{"relation_name":"negatively_regulates","term_name":"Wnt protein secretion","termid":"GO:0061355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Wnt protein secretion","termid":"GO:0061358"}


id: GO:1900783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fumiquinazoline F.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline F catabolic process (obsolete GO:1900783)","synonyms":[{"name":"fumiquinazoline F breakdown","type":"exact"},{"name":"fumiquinazoline F catabolism","type":"exact"},{"name":"fumiquinazoline F degradation","type":"exact"}],"termid":"GO:1900783"}


id: MOD:00105
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-serine amide.","definition_xrefs":["RESID:AA0096","PubMed:743209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine amide","synonyms":[{"name":"(2S)-2-amino-3-hydroxypropanamide","type":"exact"},{"name":"L-serine amide","type":"exact"},{"name":"MOD_RES Serine amide","type":"exact"},{"name":"SerN","type":"exact"},{"name":"amidated L-serine","type":"exact"},{"name":"serinamide","type":"exact"}],"termid":"MOD:00105"}


id: GO:0034363
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A triglyceride-rich lipoprotein particle that typically contains APOB100, APOE and APOCs and has a density of 1.006-1.019 g/ml and a diameter of between 25-30 nm. IDL particles are found in blood and are formed by the delipidation of very-low-density lipoprotein particles (VLDL). IDL particles are removed from blood by the liver, following binding to the APOE receptor, or are converted to low-density lipoprotein (LDL).","definition_xrefs":["GOC:expert_pt","GOC:mah","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich plasma lipoprotein particle","termid":"GO:0034385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"intermediate-density lipoprotein particle","synonyms":[{"name":"IDL complex","type":"exact"},{"name":"IDL particle","type":"exact"},{"name":"intermediate-density lipoprotein complex","type":"exact"}],"termid":"GO:0034363"}


id: FYPO:0000720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal fatty acid synthase activity","synonyms":[{"name":"abnormal FAS activity","type":"exact"}],"termid":"FYPO:0000720"}


id: PR:O14463
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.07c","secondary_identifiers":["UniProtKB:O14463"],"synonyms":[{"name":"Spom972h-TXN","type":"exact"},{"name":"TR-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Trx-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14463"}


id: PBO:0060940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFE2 like bZIP transcription factor 3","termid":"PBO:0060940"}


id: PBO:0091374
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of RAs","termid":"PBO:0091374"}


id: MONDO:0012039
data:
  {"annotated_genes":["SJAG_02562","SJAG_00988","SJAG_03494"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87093,87094,87095],"is_not":false,"summary":null,"term":"MONDO:0012039"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_02562":null,"SJAG_03494":null},"genotype_count":0,"is_obsolete":false,"name":"myocardial infarction, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:318680","UMLS:C1832662","OMIM:608446"],"synonyms":[{"name":"myocardial infarction, decreased susceptibility to","type":"exact"},{"name":"myocardial infarction, protection against","type":"related"},{"name":"myocardial infarction, susceptibility to","type":"exact"},{"name":"myocardial infarction, susceptibility to, 1","type":"related"},{"name":"susceptibility to myocardial infarction","type":"related"}],"termid":"MONDO:0012039","terms_by_termid":{"MONDO:0012039":null},"xrefs":{"Monarch":{"xref_id":"0012039"}}}


id: FYPO:0004930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is decreased during sporulation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level during cellular response to nitrogen starvation","termid":"FYPO:0001219"},{"relation_name":"is_a","term_name":"decreased protein degradation","termid":"FYPO:0002797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein degradation during sporulation","synonyms":[{"name":"decreased protein catabolic process during sporulation","type":"exact"},{"name":"decreased protein catabolism during sporulation","type":"exact"},{"name":"reduced protein degradation during sporulation","type":"exact"}],"termid":"FYPO:0004930"}


id: PBO:0041636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C intronic transcript 3","termid":"PBO:0041636"}


id: GO:0048440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the carpel over time, from its formation to the mature structure. A carpel is an organ (generally believed to be a modified foliar unit) at the centre of a flower, bearing one or more ovules and having its margins fused together or with other carpels to enclose the ovule in an ovary, and consisting also of a stigma and usually a style.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ development","termid":"GO:0048437"},{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"},{"relation_name":"part_of","term_name":"gynoecium development","termid":"GO:0048467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carpel development","secondary_identifiers":["GO:0048429"],"termid":"GO:0048440"}


id: MONDO:0968945
data:
  {"annotated_genes":["SJAG_01477"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86960],"is_not":false,"summary":null,"term":"MONDO:0968945"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with language impairment, autism, and attention deficit-hyperactivity disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620782","UMLS:C5935603","MEDGEN:1854977"],"termid":"MONDO:0968945","terms_by_termid":{"MONDO:0968945":null},"xrefs":{"Monarch":{"xref_id":"0968945"}}}


id: MONDO:0032609
data:
  {"annotated_genes":["SJAG_04639"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86038],"is_not":false,"summary":null,"term":"MONDO:0032609"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04639":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16314","DOID:0112082","OMIM:618225","UMLS:C4748753","MEDGEN:1648324"],"synonyms":[{"name":"MC1DN4","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 4","type":"related"}],"termid":"MONDO:0032609","terms_by_termid":{"MONDO:0032609":null},"xrefs":{"Monarch":{"xref_id":"0032609"}}}


id: PBO:0053594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 621","termid":"PBO:0053594"}


id: GO:1902771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of choline O-acetyltransferase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:mr","PMID:7576634"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of choline O-acetyltransferase activity (obsolete GO:1902771)","synonyms":[{"name":"activation of CHOACTase activity","type":"narrow"},{"name":"activation of acetyl-CoA:choline O-acetyltransferase activity","type":"narrow"},{"name":"activation of choline O-acetyltransferase activity","type":"narrow"},{"name":"activation of choline acetylase activity","type":"narrow"},{"name":"activation of choline acetyltransferase activity","type":"narrow"},{"name":"positive regulation of CHOACTase activity","type":"exact"},{"name":"positive regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"positive regulation of choline acetylase activity","type":"exact"},{"name":"positive regulation of choline acetyltransferase activity","type":"exact"},{"name":"up regulation of CHOACTase activity","type":"exact"},{"name":"up regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"up regulation of choline O-acetyltransferase activity","type":"exact"},{"name":"up regulation of choline acetylase activity","type":"exact"},{"name":"up regulation of choline acetyltransferase activity","type":"exact"},{"name":"up-regulation of CHOACTase activity","type":"exact"},{"name":"up-regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"up-regulation of choline O-acetyltransferase activity","type":"exact"},{"name":"up-regulation of choline acetylase activity","type":"exact"},{"name":"up-regulation of choline acetyltransferase activity","type":"exact"},{"name":"upregulation of CHOACTase activity","type":"exact"},{"name":"upregulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"upregulation of choline O-acetyltransferase activity","type":"exact"},{"name":"upregulation of choline acetylase activity","type":"exact"},{"name":"upregulation of choline acetyltransferase activity","type":"exact"}],"termid":"GO:1902771"}


id: GO:1900506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iron-sulfur-molybdenum cofactor assembly.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron-sulfur cluster assembly","termid":"GO:1903329"},{"relation_name":"regulates","term_name":"iron-sulfur-molybdenum cofactor assembly","termid":"GO:0044593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0016226"],"is_obsolete":false,"name":"regulation of iron-sulfur-molybdenum cofactor assembly","synonyms":[{"name":"regulation of FeMoco assembly","type":"exact"},{"name":"regulation of FeMoco biosynthetic process","type":"exact"},{"name":"regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"regulation of iron molybdenum cofactor biosynthetic process","type":"exact"}],"termid":"GO:1900506"}


id: GO:0102583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-sambubioside + 4-coumaryl-CoA = cyanidin 3-O-[2''-O-xylosyl) 6''-O-(p-coumaroyl) glucoside + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside-(2''-O-xyloside) 6''-O-acyltransferase activity (obsolete GO:0102583)","termid":"GO:0102583"}


id: MOD:01045
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3',5'-dichloro-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichlorinated tyrosine","termid":"MOD:01037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-dichloro-L-tyrosine","synonyms":[{"name":"3',5'-Cl2Tyr","type":"exact"}],"termid":"MOD:01045"}


id: PBO:0091423
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-Factor precursor","termid":"PBO:0091423"}


id: GO:0050844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-selenocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-selenocysteine modification","termid":"GO:0050844"}


id: PBO:0031302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-auxotrophy","termid":"PBO:0031302"}


id: FYPO:0008218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a mitotic S/G2 cell cycle phase transition normally.","definition_xrefs":["PMID:10947840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase transition","termid":"FYPO:0005275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic S/G2 phase transition","termid":"FYPO:0008218"}


id: PBO:0058027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3976 host gene","termid":"PBO:0058027"}


id: PBO:0050526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haptoglobin","termid":"PBO:0050526"}


id: PBO:0057033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 128-1","termid":"PBO:0057033"}


id: FYECO:0000326
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 4-nitroquinoline N-oxide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 4-NQO","synonyms":[{"name":"+ 4-nitroquinoline N-oxide","type":"exact"},{"name":"+ 4NQO","type":"exact"}],"termid":"FYECO:0000326"}


id: MONDO:0100101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fetal akinesia deformation sequence in which the cause of the disease is a mutation in the MUSK gene.","definition_xrefs":["OMIM:208150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fetal akinesia deformation sequence","termid":"MONDO:0008824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal akinesia deformation sequence 1","secondary_identifiers":["DOID:0111377","UMLS:C1276035","MEDGEN:220903","Orphanet:994"],"synonyms":[{"name":"FADS1","type":"exact"},{"name":"Pena-Shokeir syndrome type 1","type":"exact"},{"name":"Pena-Shokeir syndrome, type 1","type":"exact"}],"termid":"MONDO:0100101","xrefs":{"Monarch":{"xref_id":"0100101"}}}


id: PBO:0074378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 4","termid":"PBO:0074378"}


id: PBO:0071373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 32","termid":"PBO:0071373"}


id: GO:0005573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete telomerase RNA (obsolete GO:0005573)","synonyms":[{"name":"telomerase RNA","type":"exact"}],"termid":"GO:0005573"}


id: FYPO:0001231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, and structure of the cell cortex is normal (i.e. indistinguishable from wild type). The cell cortex is the region of a cell that lies just beneath the plasma membrane.","definition_xrefs":["PomBase:mah","GO:0005938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cortex morphology","termid":"FYPO:0001231"}


id: MONDO:0019740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired thrombotic thrombocytopenic purpura is the non-hereditary form of thrombotic thrombocytopenic purpura (TTP), characterized by profound peripheral thrombocytopenia, microangiopathic hemolytic anemia (MAHA) and single or multiple organ failure of variable severity.","definition_xrefs":["Orphanet:93585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired thrombocytopenia","termid":"MONDO:0001198"},{"relation_name":"is_a","term_name":"thrombotic thrombocytopenic purpura","termid":"MONDO:0018896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acquired thrombotic thrombocytopenic purpura","secondary_identifiers":["UMLS:C2584778","ICD10CM:M31.3","MEDGEN:391723","NANDO:1200319","SCTID:438476003","GARD:4607","MESH:C536901","NCIT:C131653","NANDO:1200318"],"synonyms":[{"name":"Moschowitz syndrome","type":"related"},{"name":"TTP","type":"broad"},{"name":"acquired ADAMTS13 deficiency","type":"exact"},{"name":"acquired TTP","type":"exact"},{"name":"acquired thrombotic thrombocytopenic purpura","type":"exact"},{"name":"autoimmune thrombotic thrombocytopenic purpura","type":"exact"},{"name":"idiopathic thrombotic thrombocytopenic purpura","type":"related"},{"name":"purpura, thrombotic thrombocytopenic","type":"broad"}],"termid":"MONDO:0019740","xrefs":{"Monarch":{"xref_id":"0019740"}}}


id: PBO:0052060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KASH domain containing 5","termid":"PBO:0052060"}


id: PBO:0050456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOMER2 pseudogene 2","termid":"PBO:0050456"}


id: PBO:0079666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 14","termid":"PBO:0079666"}


id: GO:0042323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the duration or quality of non-rapid eye movement (NREM) sleep.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of circadian sleep/wake cycle, sleep","termid":"GO:0042321"},{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, non-REM sleep","termid":"GO:0045188"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, non-REM sleep","termid":"GO:0042748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, non-REM sleep","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, non-REM sleep","type":"narrow"},{"name":"negative regulation of non-REM sleep","type":"exact"}],"termid":"GO:0042323"}


id: PBO:0065473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 11","termid":"PBO:0065473"}


id: GO:0047766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-carbamoyl-L-serine + H2O + H+ = CO2 + 2 NH4 + pyruvate.","definition_xrefs":["EC:4.3.1.13","RHEA:15445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"carbamoyl-serine ammonia-lyase activity","secondary_identifiers":["KEGG_REACTION:R00213","MetaCyc:CARBAMOYL-SERINE-AMMONIA-LYASE-RXN"],"synonyms":[{"name":"O-carbamoyl-L-serine ammonia-lyase (decarboxylating; pyruvate-forming)","type":"related"},{"name":"O-carbamoyl-L-serine ammonia-lyase (pyruvate-forming)","type":"related"},{"name":"O-carbamoyl-L-serine deaminase activity","type":"related"},{"name":"carbamoylserine deaminase activity","type":"related"}],"termid":"GO:0047766"}


id: PBO:0069417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 679, pseudogene","termid":"PBO:0069417"}


id: PR:Q9URZ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC732.02c gene.","definition_xrefs":["UniProtKB:Q9URZ7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-2,6-bisphosphatase C732.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC732.02c","synonyms":[{"name":"Spom972h-SPAC732.02c","type":"exact"}],"termid":"PR:Q9URZ7"}


id: GO:0061243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric renal vesicle are generated and organized. The renal vesicle is the primordial structure of the mesonephric nephron epithelium, and is formed by the condensation of mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle morphogenesis","termid":"GO:0072077"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric renal vesicle morphogenesis","termid":"GO:0061243"}


id: PBO:0051519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor type 1","termid":"PBO:0051519"}


id: PATO:0002328
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased position","termid":"PATO:0001476"},{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased angle to","termid":"PATO:0002328"}


id: PBO:0036415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane-actinomyosin ring linker protein Sbg1","termid":"PBO:0036415"}


id: PBO:0112879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gocam","termid":"PBO:0112879"}


id: GO:0005464
data:
  {"annotated_genes":["SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77443],"is_not":false,"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of UDP-xylose from one side of a membrane to the other. UDP-xylose is a substance composed of xylose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"UDP-xylose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-742373"],"termid":"GO:0005464","terms_by_termid":{"GO:0005464":null}}


id: GO:1904767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to octanoic acid.","definition_xrefs":["PMID:19828452","GOC:kmv","GO_REF:0000067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid binding","termid":"GO:0005504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"octanoic acid binding","synonyms":[{"name":"caprylic acid binding","type":"exact"}],"termid":"GO:1904767"}


id: MONDO:0014852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete palmoplantar carcinoma, multiple self-healing (obsolete MONDO:0014852)","termid":"MONDO:0014852","xrefs":{"Monarch":{"xref_id":"0014852"}}}


id: FYPO:0001802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated cell during cellular response to caffeine (obsolete FYPO:0001802)","synonyms":[{"name":"elongated cell during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"elongated cell during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"elongated in response to caffeine","type":"exact"}],"termid":"FYPO:0001802"}


id: PBO:0070570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 36","termid":"PBO:0070570"}


id: PBO:0052292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 1 like","termid":"PBO:0052292"}


id: PBO:0001745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm5","termid":"PBO:0001745"}


id: PBO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression cell cycle regulated","termid":"PBO:0000436"}


id: MONDO:0017018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated pauciimmune pulmonary capillaritis is a small vessel vasculitis restricted to the lungs that may induce diffuse alveolar hemorrhage with dyspnea, anemia, chest pain, hemoptysis, bilateral and diffuse alveolar infiltrates at chest X-rays, without any underlying systemic disease. ANCA are frequently positive but could be negative.","definition_xrefs":["Orphanet:264691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated pulmonary capillaritis","secondary_identifiers":["GARD:20924","SCTID:707436001","UMLS:C3873357","icd11.foundation:1610022220","ICD9:448.9","icd11.foundation:1607123556","MEDGEN:842738"],"termid":"MONDO:0017018","xrefs":{"Monarch":{"xref_id":"0017018"}}}


id: PBO:0050818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 3","termid":"PBO:0050818"}


id: GO:0003854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxy-Delta(5)-steroid + NAD+ = a 3-oxo-Delta(5)-steroid + NADH + H+. Also acts on on 3-beta-hydroxypregn-5-en-20-one to form progesterone.","definition_xrefs":["EC:1.1.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-beta-hydroxy-Delta5-steroid dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-193816","Reactome:R-HSA-192097","Reactome:R-HSA-193789","MetaCyc:1.1.1.145-RXN","Reactome:R-HSA-196350","Reactome:R-HSA-196372"],"synonyms":[{"name":"3-beta-hydroxy-5-ene steroid dehydrogenase activity","type":"related"},{"name":"3-beta-hydroxy-D5-steroid dehydrogenase activity","type":"exact"},{"name":"3beta-HSDH","type":"related"},{"name":"3beta-hydroxy steroid dehydrogenase/isomerase activity","type":"related"},{"name":"3beta-hydroxy-5-ene steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-5-ene-steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-5-ene-steroid oxidoreductase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid dehydrogenase/isomerase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid oxidoreductase","type":"broad"},{"name":"3beta-hydroxy-delta5-steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-delta5-steroid:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"5-ene-3-beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"delta5-3beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"progesterone reductase activity","type":"broad"},{"name":"steroid-delta5-3beta-ol dehydrogenase activity","type":"related"}],"termid":"GO:0003854"}


id: GO:0051485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terpenoids via isopentenyl diphosphate, synthesized by the mevalonate pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in terpenoid biosynthesis, and in mevalonate-dependent terpenoid biosynthesis, acetate, in the form of acetyl-CoA, is converted to isopentenyl diphosphate (IPP) through a series of mevalonate intermediates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"terpenoid biosynthetic process, mevalonate-dependent","synonyms":[{"name":"terpene biosynthesis, mevalonate-dependent","type":"narrow"},{"name":"terpene biosynthetic process, mevalonate-dependent","type":"narrow"},{"name":"terpenoid anabolism, mevalonate-dependent","type":"exact"},{"name":"terpenoid formation, mevalonate-dependent","type":"exact"},{"name":"terpenoid synthesis, mevalonate-dependent","type":"exact"}],"termid":"GO:0051485"}


id: PBO:0048120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 1 (H blood group)","termid":"PBO:0048120"}


id: GO:0002838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to tumor cell","termid":"GO:0002835"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"immune response to tumor cell","termid":"GO:0002418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immune response to tumor cell","synonyms":[{"name":"down regulation of immune response to tumor cell","type":"exact"},{"name":"down-regulation of immune response to tumor cell","type":"exact"},{"name":"downregulation of immune response to tumor cell","type":"exact"},{"name":"inhibition of immune response to tumor cell","type":"narrow"},{"name":"negative regulation of immune response to tumour cell","type":"exact"}],"termid":"GO:0002838"}


id: PBO:0041667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein","termid":"PBO:0041667"}


id: PBO:0036174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate_dehydrogenase_(NADP+)_activity_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0036174"}


id: FYPO:0003906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on bleomycin","synonyms":[{"name":"normal cell population growth in presence of bleomycin","type":"exact"},{"name":"normal cell population growth on bleomycin","type":"exact"},{"name":"normal cellular response to bleomycin","type":"related"},{"name":"normal vegetative cell population growth on bleomycin","type":"exact"}],"termid":"FYPO:0003906"}


id: PBO:0080522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family homolog 4, pseudogene","termid":"PBO:0080522"}


id: GO:1904193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cholangiocyte apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24498161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte apoptotic process","termid":"GO:1904192"},{"relation_name":"negatively_regulates","term_name":"cholangiocyte apoptotic process","termid":"GO:1902488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholangiocyte apoptotic process","synonyms":[{"name":"down regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"down regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"down regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"down regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"down-regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"down-regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"down-regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"down-regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"downregulation of cholangiocyte apoptosis","type":"narrow"},{"name":"downregulation of cholangiocyte apoptotic process","type":"exact"},{"name":"downregulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"downregulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"inhibition of cholangiocyte apoptosis","type":"narrow"},{"name":"inhibition of cholangiocyte apoptotic process","type":"narrow"},{"name":"inhibition of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"inhibition of epithelial cell of bile duct apoptotic process","type":"narrow"},{"name":"negative regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"negative regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"negative regulation of epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1904193"}


id: PBO:0003417
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mi2-like protein Interacting with clr Three","termid":"PBO:0003417"}


id: PBO:0085381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP-binding cassette (ABC) transporter; multidrug transporter involved in multidrug resistance and resistance to singlet oxygen species","termid":"PBO:0085381"}


id: PBO:0048894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 14, pseudogene","termid":"PBO:0048894"}


id: GO:0098812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end of a rRNA, occurring as part of the process of polyadenylation-dependent rRNA catabolism in the nucleus.","definition_xrefs":["GOC:dph","GOC:jl","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear rRNA polyadenylation involved in polyadenylation-dependent rRNA catabolic process (obsolete GO:0098812)","synonyms":[{"name":"nuclear rRNA polyadenylation during polyadenylation-dependent rRNA catabolic process","type":"related"},{"name":"nuclear rRNA polyadenylation involved in poly(A)-dependent rRNA catabolic process","type":"related"}],"termid":"GO:0098812"}


id: MONDO:0011936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia with brain and digit anomalies is characterized by anophthalmia or microphthalmia, retinal dystrophy, and/or myopia, associated in some cases with cerebral anomalies. It has been described in two families. Polydactyly may also be present. Linkage analysis allowed identification of mutations in the BMP4 gene, which has already been shown to play a role in eye development.","definition_xrefs":["Orphanet:139471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia with brain and digit anomalies","secondary_identifiers":["UMLS:C1864689","DOID:0111805","MESH:C566440","OMIM:607932","MEDGEN:355268","GARD:3645","SCTID:721878003"],"synonyms":[{"name":"Bakrania-Ragge syndrome","type":"exact"},{"name":"MCOPS6","type":"exact"},{"name":"anophthalmia clinical with micrognathia malformed ears digital anomalies and abnormal external genitalia","type":"related"},{"name":"anophthalmia, clinical, with micrognathia, malformed ears, digital anomalies, and abnormal external genitalia","type":"related"},{"name":"microphthalmia and pituitary anomalies","type":"related"},{"name":"microphthalmia syndromic 6","type":"related"},{"name":"microphthalmia with brain and digit anomalies","type":"exact"},{"name":"microphthalmia with brain and digit developmental anomalies","type":"related"},{"name":"microphthalmia, syndromic 6","type":"related"},{"name":"microphthalmia, syndromic type 6","type":"exact"},{"name":"syndromic microphthalmia type 6","type":"exact"}],"termid":"MONDO:0011936","xrefs":{"Monarch":{"xref_id":"0011936"}}}


id: PBO:0077770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 6","termid":"PBO:0077770"}


id: PBO:0075521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E2","termid":"PBO:0075521"}


id: GO:0090088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide transport","termid":"GO:0090087"},{"relation_name":"regulates","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of oligopeptide transport","termid":"GO:0090088"}


id: FYPO:0004073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to a pheromone occurs in G1 phase, but begins only after the cells have undergone two rounds of cell division in the presence of the pheromone.","definition_xrefs":["PMID:9034336","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to pheromone","termid":"FYPO:0004074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0000298","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"two cell divisions prior to cell cycle arrest in mitotic G1 phase in response to pheromone","synonyms":[{"name":"two cell divisions prior to cell cycle arrest in mitotic G1 phase during cellular response to pheromone","type":"exact"},{"name":"two cell divisions prior to mitotic G1 arrest in response to pheromone","type":"exact"},{"name":"two cell divisions prior to mitotic cell cycle arrest in G1 phase in response to pheromone","type":"exact"},{"name":"two cell divisions prior to pheromone-induced G1 arrest","type":"exact"}],"termid":"FYPO:0004073"}


id: PBO:0028638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiotic_spindle_absent_from_cell_during_meiosis_II","termid":"PBO:0028638"}


id: MONDO:0017759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of neurotransmitter metabolism and transport","termid":"MONDO:0019219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of catecholamine synthesis","secondary_identifiers":["MEDGEN:575179","Orphanet:309830","SCTID:237921002","UMLS:C0342685","GARD:21351","icd11.foundation:1382276026","ICD9:270.8"],"termid":"MONDO:0017759","xrefs":{"Monarch":{"xref_id":"0017759"}}}


id: GO:0019757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving glycosinolates, substituted thioglycosides found in rapeseed products and related cruciferae.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete glycosinolate metabolic process (obsolete GO:0019757)","synonyms":[{"name":"glycosinolate metabolism","type":"exact"}],"termid":"GO:0019757"}


id: GO:0102901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + isopimaradienol + NADPH + O2 = isopimaradiene-diol + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isopimaradienol hydroxylase activity (obsolete GO:0102901)","termid":"GO:0102901"}


id: GO:0052326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the symbiont organism mediated by a substance secreted by the other organism by a type IV secretion system. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with symbiont via protein secreted by type IV secretion system (obsolete GO:0052326)","synonyms":[{"name":"interaction with symbiont via protein secreted by type IV secretion system","type":"exact"}],"termid":"GO:0052326"}


id: PBO:0076962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta receptor associated protein 1","termid":"PBO:0076962"}


id: MONDO:0003639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the hilar region of the lung.","definition_xrefs":["NCIT:C5671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung neoplasm","termid":"MONDO:0021117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung hilum neoplasm","secondary_identifiers":["DOID:5767","MEDGEN:224849","SCTID:126707007","UMLS:C1290358"],"synonyms":[{"name":"hilar lung neoplasm","type":"exact"},{"name":"hilar lung tumor","type":"exact"},{"name":"hilar lung tumour","type":"exact"},{"name":"lung hilum neoplasm","type":"exact"},{"name":"lung hilum tumor","type":"exact"},{"name":"lung hilum tumour","type":"exact"},{"name":"lung hilus neoplasm","type":"exact"},{"name":"lung hilus neoplasm (disease)","type":"exact"},{"name":"lung hilus tumor","type":"exact"},{"name":"lung hilus tumour","type":"exact"},{"name":"neoplasm of hilus of lung","type":"exact"},{"name":"neoplasm of lung hilus","type":"exact"},{"name":"tumor of lung hilus","type":"exact"},{"name":"tumour of lung hilus","type":"exact"}],"termid":"MONDO:0003639","xrefs":{"Monarch":{"xref_id":"0003639"}}}


id: MONDO:0022406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aksu von stockhausen syndrome (obsolete MONDO:0022406)","termid":"MONDO:0022406","xrefs":{"Monarch":{"xref_id":"0022406"}}}


id: PBO:0057717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR1302-2 host gene","termid":"PBO:0057717"}


id: MONDO:0010245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked cone-rod dystrophy","termid":"MONDO:0021155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked cone-rod dystrophy 2","secondary_identifiers":["MEDGEN:341161","OMIM:300085","GARD:1462","DOID:0111006","UMLS:C1848139","MESH:C564717"],"synonyms":[{"name":"COD2","type":"exact"},{"name":"CORDX2","type":"exact"},{"name":"X-linked cone dystrophy 2","type":"exact"},{"name":"X-linked cone-rod dystrophy type 2","type":"exact"},{"name":"cone dystrophy 2, X-linked","type":"exact"},{"name":"cone dystrophy X-linked 2","type":"exact"},{"name":"cone dystrophy, progressive X-linked, 2","type":"exact"},{"name":"cone-rod dystrophy X-linked 2","type":"exact"},{"name":"cone-rod dystrophy, X-linked, 2","type":"exact"}],"termid":"MONDO:0010245","xrefs":{"Monarch":{"xref_id":"0010245"}}}


id: PBO:0113462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GET complex; involved in insertion of tail-anchored proteins into the ER membrane; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for normal mitochondrial morphology and inheritance; Get1p and Get2p form an aqueous channel for protein translocation and insertion into the membrane","termid":"PBO:0113462"}


id: GO:0002948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + 7-cyano-7-carbaguanine15 in tRNA + H2O = L-glutamate + archaeine15 in tRNA.","definition_xrefs":["RHEA:54084","PMID:20129918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"archaeosine synthase activity","secondary_identifiers":["EC:2.6.1.97","Wikipedia:Archaeosine_synthase"],"synonyms":[{"name":"ArcS","type":"related"},{"name":"glutamine:preQ0-tRNA amidinotransferase","type":"related"}],"termid":"GO:0002948"}


id: PBO:0030325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cortical_patch_localization","termid":"PBO:0030325"}


id: GO:0042321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the duration or quality of sleep, a readily reversible state of reduced awareness and metabolic activity that occurs periodically in many animals.","definition_xrefs":["GOC:go_curators","GOC:jl","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of circadian rhythm","termid":"GO:0042754"},{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, sleep","termid":"GO:0045187"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, sleep","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, sleep","type":"narrow"},{"name":"negative regulation of sleep","type":"exact"}],"termid":"GO:0042321"}


id: PBO:0086728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not an essential gene; YPL216W has a paralog, ITC1, that arose from the whole genome duplication","termid":"PBO:0086728"}


id: MONDO:0015758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"},{"relation_name":"is_a","term_name":"primary cutaneous lymphoma","termid":"MONDO:0018898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005093"],"is_obsolete":false,"name":"primary cutaneous T-cell lymphoma","secondary_identifiers":["MedDRA:10011677","GARD:6226","MESH:D016410","UMLS:C0079773","MEDGEN:36336","Orphanet:171901"],"termid":"MONDO:0015758","xrefs":{"Monarch":{"xref_id":"0015758"}}}


id: GO:0052119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near its host organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in host environment (obsolete GO:0052119)","synonyms":[{"name":"negative energy taxis in response to host environment","type":"exact"}],"termid":"GO:0052119"}


id: GO:0070862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of proteins from the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein exit from endoplasmic reticulum","termid":"GO:0070861"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"negatively_regulates","term_name":"protein exit from endoplasmic reticulum","termid":"GO:0032527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein exit from endoplasmic reticulum","synonyms":[{"name":"down regulation of protein exit from endoplasmic reticulum","type":"exact"},{"name":"down-regulation of protein exit from endoplasmic reticulum","type":"exact"},{"name":"downregulation of protein exit from endoplasmic reticulum","type":"exact"},{"name":"inhibition of protein exit from endoplasmic reticulum","type":"narrow"},{"name":"negative regulation of protein exit from ER","type":"exact"},{"name":"negative regulation of protein export from ER","type":"exact"},{"name":"negative regulation of protein export from endoplasmic reticulum","type":"exact"}],"termid":"GO:0070862"}


id: PBO:0080871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YLP motif containing 1","termid":"PBO:0080871"}


id: GO:0008156
data:
  {"annotated_genes":["SJAG_03997","SJAG_02724","SJAG_03097","SJAG_03048","SJAG_00247","SJAG_04855","SJAG_02162","SJAG_01068","SJAG_04671","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[102164,108689,97569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[103021],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[106434,99165,108314,103022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[99166,102074,114816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[99167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[102075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA replication.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA replication","termid":"GO:0006275"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"negatively_regulates","term_name":"DNA replication","termid":"GO:0006260"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01068":null,"SJAG_01210":null,"SJAG_02162":null,"SJAG_02724":null,"SJAG_03048":null,"SJAG_03097":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication inhibitor","type":"related"},{"name":"down regulation of DNA replication","type":"exact"},{"name":"down-regulation of DNA replication","type":"exact"},{"name":"downregulation of DNA replication","type":"exact"},{"name":"inhibition of DNA replication","type":"narrow"}],"termid":"GO:0008156","terms_by_termid":{"GO:0011000":null,"GO:0031582":null,"GO:0071807":null,"GO:0090001":null,"GO:1902681":null,"GO:1903464":null,"GO:1903467":null}}


id: MONDO:0040675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, well circumscribed soft tissue neoplasm characterized by the presence of spindle shaped myofibroblasts and mast cells in a collagenous stroma.","definition_xrefs":["NCIT:C49012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblastic neoplasm","termid":"MONDO:0006209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myofibroblastoma","secondary_identifiers":["MEDGEN:66894","UMLS:C0242404","ICDO:8825/0"],"synonyms":[{"name":"myofibroblastoma","type":"exact"}],"termid":"MONDO:0040675","xrefs":{"Monarch":{"xref_id":"0040675"}}}


id: PBO:0061911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily AC member 1 pseudogene","termid":"PBO:0061911"}


id: PBO:0046890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM13A antisense RNA 1","termid":"PBO:0046890"}


id: PBO:0079440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tu translation elongation factor, mitochondrial pseudogene 1","termid":"PBO:0079440"}


id: GO:0060324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a face from an initial condition to its mature state. The face is the ventral division of the head.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"head development","termid":"GO:0060322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"face development","termid":"GO:0060324"}


id: PBO:0062666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily H member 1","termid":"PBO:0062666"}


id: GO:0005537
data:
  {"annotated_genes":["SJAG_04571","SJAG_03535","SJAG_01991","SJAG_02839"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79094,110542,113555,118312],"is_not":false,"summary":null,"term":"GO:0005537"}]},"cv_name":"molecular_function","definition":"Binding to mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans.","definition_xrefs":["ISBN:0192800981","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01991":null,"SJAG_02839":null,"SJAG_03535":null,"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"D-mannose binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-947991"],"synonyms":[{"name":"mannose binding","type":"broad"},{"name":"mannose binding lectin","type":"related"}],"termid":"GO:0005537","terms_by_termid":{"GO:0005537":null}}


id: MONDO:0958347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare dysraphic abnormality characterized by the infiltration of fatty tissue localized in the filum terminale, thickens and loses its flexibility, with normal conus shape, regardless of conus level. There is no other spinal cord malformation associated, but it can be associated with extraspinal malformation (ex: anorectal malformation) or syndromic situation.","definition_xrefs":["Orphanet:645325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysraphic spinal cord lipoma","termid":"MONDO:0958260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated filum lipoma","secondary_identifiers":["UMLS:C5816720","MEDGEN:1853135"],"termid":"MONDO:0958347","xrefs":{"Monarch":{"xref_id":"0958347"}}}


id: PBO:0080290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 54 pseudogene","termid":"PBO:0080290"}


id: MONDO:0024507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated aniridia","termid":"MONDO:0007119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"aniridia 1","secondary_identifiers":["UMLS:C0344542","MEDGEN:576337","SCTID:253231007","OMIM:106210","DOID:0070532"],"synonyms":[{"name":"AN1","type":"exact"},{"name":"aniridia","type":"broad"},{"name":"aniridia 1","type":"exact"},{"name":"aniridia II","type":"related"},{"name":"aniridia II, formerly","type":"related"},{"name":"cataract with late-onset corneal dystrophy","type":"exact"},{"name":"cataract, congenital, with late-onset corneal dystrophy","type":"related"}],"termid":"MONDO:0024507","xrefs":{"Monarch":{"xref_id":"0024507"}}}


id: PBO:0066743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 40","termid":"PBO:0066743"}


id: GO:0070162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of adiponectin, a protein hormone, by adipose tissue.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adiponectin secretion","termid":"GO:0070162"}


id: PBO:0066878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 178","termid":"PBO:0066878"}


id: MONDO:0001986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pupillary function","termid":"MONDO:0001303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Argyll Robertson pupil","secondary_identifiers":["DOID:14523","ICD10CM:H57.01","icd11.foundation:1086796982","MEDGEN:536150","SCTID:21011008","ICD9:379.45","UMLS:C0234668"],"synonyms":[{"name":"Argyll Robertson phenomenon or pupil, nonsyphilitic","type":"exact"},{"name":"Argyll Robertson pupil, atypical","type":"exact"},{"name":"atypical Argyll-Robertson pupil","type":"exact"}],"termid":"MONDO:0001986","xrefs":{"Monarch":{"xref_id":"0001986"}}}


id: GO:0033979
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving box H/ACA type small nucleolar RNA.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0016074","GO:0008150"],"is_obsolete":false,"name":"box H/ACA sno(s)RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"box H/ACA sRNA metabolic process","type":"narrow"},{"name":"box H/ACA snoRNA metabolic process","type":"narrow"}],"termid":"GO:0033979","terms_by_termid":{"GO:0000495":null}}


id: PBO:0060623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 1","termid":"PBO:0060623"}


id: GO:0106250
data:
  {"annotated_genes":["SJAG_02898"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96185],"is_not":false,"summary":null,"term":"GO:0106250"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that represses or decreases the transcription of specific genes sets transcribed by RNA polymerase III.","definition_xrefs":["PMID:15590667","PMID:31833215","GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription repressor activity","termid":"GO:0001217"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0001217"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003700","GO:0001217","GO:0140110","GO:0003674"],"is_obsolete":false,"name":"DNA-binding transcription repressor activity, RNA polymerase III-specific","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106250","terms_by_termid":{"GO:0106250":null}}


id: PBO:0070188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 106 pseudogene","termid":"PBO:0070188"}


id: PBO:0066833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 132","termid":"PBO:0066833"}


id: PBO:0086442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative lipase; involved in lipid metabolism; not an essential gene; YDL109C has a paralog, ROG1, that arose from the whole genome duplication","termid":"PBO:0086442"}


id: POMBASE_GENE_EX_REL:in_presence_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"a substance is present","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_presence_of","termid":"POMBASE_GENE_EX_REL:in_presence_of"}


id: GO:0021815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Rearrangements of the microtubule cytoskeleton that contribute to the movement of cells along radial glial cells as a component of the process of cerebral cortex glial-mediated radial migration.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","PMID:12626695","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"cell motility involved in cerebral cortex radial glia guided migration","termid":"GO:0021814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"modulation of microtubule cytoskeleton involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"modulation of microtubule cytoskeleton involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021815"}


id: GO:1901734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of quercetin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone biosynthetic process","termid":"GO:0051553"},{"relation_name":"is_a","term_name":"quercetin metabolic process","termid":"GO:1901732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin biosynthetic process","synonyms":[{"name":"quercetin anabolism","type":"exact"},{"name":"quercetin biosynthesis","type":"exact"},{"name":"quercetin formation","type":"exact"},{"name":"quercetin synthesis","type":"exact"}],"termid":"GO:1901734"}


id: GO:1901820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alpha-zeacarotene.","definition_xrefs":["UniPathway:UPA00804","GOC:TermGenie","GOC:yaf","PMID:6060456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"alpha-zeacarotene metabolic process","termid":"GO:1901819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"alpha-zeacarotene catabolic process","synonyms":[{"name":"alpha-zeacarotene breakdown","type":"exact"},{"name":"alpha-zeacarotene catabolism","type":"exact"},{"name":"alpha-zeacarotene degradation","type":"exact"}],"termid":"GO:1901820"}


id: MONDO:0030893
data:
  {"annotated_genes":["SJAG_04409","SJAG_00488"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85509,85510],"is_not":false,"summary":null,"term":"MONDO:0030893"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00488":null,"SJAG_04409":null},"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy, progressive, infantile-onset, with or without deafness","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619147","UMLS:C5542996","MEDGEN:1779519"],"synonyms":[{"name":"LEPID","type":"exact"}],"termid":"MONDO:0030893","terms_by_termid":{"MONDO:0030893":null},"xrefs":{"Monarch":{"xref_id":"0030893"}}}


id: PBO:0030984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_methylation","termid":"PBO:0030984"}


id: FYPO:0004082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein phosphorylation during mitosis","synonyms":[{"name":"normal protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during mitotic M phase","type":"related"},{"name":"normal protein phosphorylation during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004082"}


id: GO:0090256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to imaginal disc-derived wing morphogenesis.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"},{"relation_name":"regulates","term_name":"cell proliferation involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090256"}


id: MONDO:0859311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, demyelinating, type 1J","secondary_identifiers":["OMIM:620111","UMLS:C5774249","MEDGEN:1824022"],"termid":"MONDO:0859311","xrefs":{"Monarch":{"xref_id":"0859311"}}}


id: PBO:0030892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_oxidative_stress_during_vegetative_growth","termid":"PBO:0030892"}


id: PBO:0039715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 1","termid":"PBO:0039715"}


id: PBO:0069922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1214, pseudogene","termid":"PBO:0069922"}


id: MONDO:0015857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare non-malformative gynecologic or obstetric disease (obsolete MONDO:0015857)","secondary_identifiers":["Orphanet:180199"],"termid":"MONDO:0015857","xrefs":{"Monarch":{"xref_id":"0015857"}}}


id: PBO:0029155
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_collapse","termid":"PBO:0029155"}


id: PBO:0088684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery monothiol glutaredoxin Grx4","termid":"PBO:0088684"}


id: PBO:0071377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL30 antisense RNA 1","termid":"PBO:0071377"}


id: MONDO:0010621
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85131],"is_not":false,"summary":null,"term":"MONDO:0010621"}]},"cv_name":"mondo","definition":"CHILD syndrome (Congenital Hemidysplasia with Ichthyosiform nevus and Limb Defects, CS) is an X-linked dominant genodermatosis characterized by unilateral inflammatory and scaling skin lesions with ipsilateral visceral and limb anomalies.","definition_xrefs":["Orphanet:139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"X-linked ichthyosis syndrome","termid":"MONDO:0017269"},{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"},{"relation_name":"is_a","term_name":"chondrodysplasia punctata","termid":"MONDO:0019701"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005093"],"is_obsolete":false,"name":"CHILD syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:759.89","UMLS:C0265267","NANDO:1200629","MEDGEN:82697","NANDO:2201358","GARD:6039","MESH:C562515","SCTID:17608003","NORD:1284","NANDO:2200998","OMIM:308050","DOID:0111822"],"synonyms":[{"name":"CHILD syndrome","type":"exact"},{"name":"CHILD syndrome, X-linked dominant","type":"exact"},{"name":"Ichthyosis, CHILD Syndrome","type":"exact"},{"name":"child nevus","type":"exact"},{"name":"child syndrome","type":"exact"},{"name":"congenital hemidysplasia with ichthyosiform erythroderma and limb defects","type":"related"},{"name":"congenital hemidysplasia with ichthyosiform nevus and limb defects","type":"related"},{"name":"congenital hemidysplasia with ichthyosiform nevus and limbs defects","type":"exact"},{"name":"ichthyosiform erythroderma, unilateral, with ipsilateral malformations, especially absence deformity of limbs","type":"related"},{"name":"ichthyosis, child syndrome","type":"related"}],"termid":"MONDO:0010621","terms_by_termid":{"MONDO:0010621":null},"xrefs":{"Monarch":{"xref_id":"0010621"}}}


id: MONDO:0004805
data:
  {"annotated_genes":["SJAG_04743","SJAG_02528","SJAG_00222","SJAG_03089","SJAG_02208","SJAG_01759","SJAG_03889","SJAG_03684","SJAG_00739","SJAG_02330","SJAG_01732","SJAG_02527","SJAG_01798","SJAG_04810","SJAG_01960","SJAG_02453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030519"},{"annotations":[84835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014118"},{"annotations":[85864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"},{"annotations":[85780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[84871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011971"},{"annotations":[85898,85897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958013"},{"annotations":[85415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009953"},{"annotations":[86035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957809"},{"annotations":[85895,85894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958017"},{"annotations":[86488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032899"},{"annotations":[86029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008214"},{"annotations":[87125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"},{"annotations":[86582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011405"},{"annotations":[85505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012559"},{"annotations":[86512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044208"},{"annotations":[86427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010294"}]},"cv_name":"mondo","definition":"A disease involving leukocytes.","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00739":null,"SJAG_01732":null,"SJAG_01759":null,"SJAG_01798":null,"SJAG_01960":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02453":null,"SJAG_02527":null,"SJAG_02528":null,"SJAG_03089":null,"SJAG_03684":null,"SJAG_03889":null,"SJAG_04743":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"leukocyte disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:288.9","MEDGEN:7325","SCTID:54097007","UMLS:C0023510","MESH:D007960","ICD9:288","DOID:9500"],"synonyms":[{"name":"disease of leukocyte","type":"exact"},{"name":"disease or disorder of leukocyte","type":"exact"},{"name":"disorder of leukocyte","type":"exact"},{"name":"disorder, leukocyte","type":"exact"},{"name":"disorders, leukocyte","type":"exact"},{"name":"leukocyte disease","type":"exact"},{"name":"leukocyte disease or disorder","type":"exact"},{"name":"leukocyte disorder","type":"exact"},{"name":"white blood cell disorder","type":"exact"}],"termid":"MONDO:0004805","terms_by_termid":{"MONDO:0008214":null,"MONDO:0009693":null,"MONDO:0009953":null,"MONDO:0010294":null,"MONDO:0010600":null,"MONDO:0011405":null,"MONDO:0011971":null,"MONDO:0011997":null,"MONDO:0012559":null,"MONDO:0014118":null,"MONDO:0030519":null,"MONDO:0032899":null,"MONDO:0044208":null,"MONDO:0957809":null,"MONDO:0958013":null,"MONDO:0958017":null},"xrefs":{"Monarch":{"xref_id":"0004805"}}}


id: GO:1901430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of syringal lignin biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of syringal lignin biosynthetic process","termid":"GO:1901428"},{"relation_name":"positively_regulates","term_name":"syringal lignin biosynthetic process","termid":"GO:1901066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of syringal lignin biosynthetic process","synonyms":[{"name":"activation of S-lignin biosynthetic process","type":"exact"},{"name":"activation of syringal lignin anabolism","type":"exact"},{"name":"activation of syringal lignin biosynthesis","type":"exact"},{"name":"activation of syringal lignin biosynthetic process","type":"narrow"},{"name":"activation of syringal lignin formation","type":"exact"},{"name":"activation of syringal lignin synthesis","type":"exact"},{"name":"positive regulation of S-lignin biosynthetic process","type":"exact"},{"name":"positive regulation of syringal lignin anabolism","type":"exact"},{"name":"positive regulation of syringal lignin biosynthesis","type":"exact"},{"name":"positive regulation of syringal lignin formation","type":"exact"},{"name":"positive regulation of syringal lignin synthesis","type":"exact"},{"name":"up regulation of S-lignin biosynthetic process","type":"exact"},{"name":"up regulation of syringal lignin anabolism","type":"exact"},{"name":"up regulation of syringal lignin biosynthesis","type":"exact"},{"name":"up regulation of syringal lignin biosynthetic process","type":"exact"},{"name":"up regulation of syringal lignin formation","type":"exact"},{"name":"up regulation of syringal lignin synthesis","type":"exact"},{"name":"up-regulation of S-lignin biosynthetic process","type":"exact"},{"name":"up-regulation of syringal lignin anabolism","type":"exact"},{"name":"up-regulation of syringal lignin biosynthesis","type":"exact"},{"name":"up-regulation of syringal lignin biosynthetic process","type":"exact"},{"name":"up-regulation of syringal lignin formation","type":"exact"},{"name":"up-regulation of syringal lignin synthesis","type":"exact"},{"name":"upregulation of S-lignin biosynthetic process","type":"exact"},{"name":"upregulation of syringal lignin anabolism","type":"exact"},{"name":"upregulation of syringal lignin biosynthesis","type":"exact"},{"name":"upregulation of syringal lignin biosynthetic process","type":"exact"},{"name":"upregulation of syringal lignin formation","type":"exact"},{"name":"upregulation of syringal lignin synthesis","type":"exact"}],"termid":"GO:1901430"}


id: PBO:0004381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein Xdj1 (predicted)","termid":"PBO:0004381"}


id: PBO:0068294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase 3","termid":"PBO:0068294"}


id: GO:0060278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ovulation, the release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:dph","GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ovulation","termid":"GO:0030728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ovulation","termid":"GO:0060278"}


id: PBO:0027816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_uracil_nitrogen_source","termid":"PBO:0027816"}


id: PR:O74456
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pef1 gene.","definition_xrefs":["UniProtKB:O74456","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase pef1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.11","synonyms":[{"name":"PHO85 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pef1","type":"exact"},{"name":"cyclin-dependent kinase pef1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74456"}


id: PBO:0017559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSIF transcription elongation factor complex subunit Spt5","termid":"PBO:0017559"}


id: GO:0002544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Inflammation of prolonged duration (weeks or months) in which active inflammation, tissue destruction, and attempts at repair are proceeding simultaneously. Although it may follow acute inflammation, chronic inflammation frequently begins insidiously, as a low-grade, smoldering, often asymptomatic response.","definition_xrefs":["GOC:jal","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chronic inflammatory response","termid":"GO:0002544"}


id: PBO:0058822
data:
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id: GO:1990067
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id: PBO:0067185
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id: GO:0018106
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id: PBO:0040947
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id: PBO:0015664
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id: PBO:0084272
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id: GO:0140101
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id: GO:0061632
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id: PBO:0027855
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id: PBO:0054060
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id: GO:0048188
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id: GO:0072186
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id: GO:0033001
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id: PBO:0000141
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id: PBO:0058772
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id: GO:0140351
data:
  {"annotated_genes":["SJAG_01731","SJAG_02897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94221,97728],"is_not":false,"summary":null,"term":"GO:0140351"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of glycosylceramide from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP. Glycosylceramides are ceramides containing a functional group derived from a sugar.","definition_xrefs":["PMID:30530492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid transporter activity","termid":"GO:0046624"},{"relation_name":"is_a","term_name":"flippase activity","termid":"GO:0140327"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0140303"],"is_obsolete":false,"name":"glycosylceramide flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactocerebroside flippase activity","type":"narrow"},{"name":"galactosylceramide flippase activity","type":"narrow"},{"name":"glucosylceramide flippase activity","type":"narrow"},{"name":"glycoceramide flippase activity","type":"exact"},{"name":"glycosylceramide flippase activity (exoplasmic to cytosolic leaflet)","type":"exact"}],"termid":"GO:0140351","terms_by_termid":{"GO:0140351":null}}


id: PBO:0090783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, serine Fsf1","termid":"PBO:0090783"}


id: PBO:0090076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase Sct1/Gpt1-like","termid":"PBO:0090076"}


id: MONDO:0021496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the lip.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"lip neoplasm","termid":"MONDO:0021249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of lip","secondary_identifiers":["UMLS:C0153932","ICD10CM:D10.0","MEDGEN:102294","icd11.foundation:2019143477","SCTID:92185002","ICD9:210.0","NCIT:C3591"],"synonyms":[{"name":"benign Lip neoplasm","type":"exact"},{"name":"benign Lip tumor","type":"exact"},{"name":"benign Lip tumour","type":"exact"},{"name":"benign neoplasm of the Lip","type":"exact"},{"name":"benign tumor of Lip","type":"exact"},{"name":"benign tumor of the Lip","type":"exact"},{"name":"benign tumour of Lip","type":"exact"},{"name":"benign tumour of the Lip","type":"exact"},{"name":"lip benign neoplasm","type":"exact"},{"name":"lip neoplasm, benign","type":"exact"}],"termid":"MONDO:0021496","xrefs":{"Monarch":{"xref_id":"0021496"}}}


id: GO:0061373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillary axonal complex over time, from its formation to the mature structure. The mammillary axonal complex is formed by the axons from the lateral, medial mammillary and the dorsal premammillary nuclei which share a branching pattern. Every neuron gives off one axonal stem that bifurcates into 2 branches. One of the branches is directed dorsally to the thalamus and another caudally to the midbrain.","definition_xrefs":["PMID:10662642","GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary body development","termid":"GO:0021767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillary axonal complex development","termid":"GO:0061373"}


id: PBO:0053725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 939","termid":"PBO:0053725"}


id: PBO:0031284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_at_centromere","termid":"PBO:0031284"}


id: PBO:0005555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexaprenyldihydroxybenzoate methyltransferase Coq3","termid":"PBO:0005555"}


id: GO:0035530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 6 (CCL6) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:19812544","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 6 production","synonyms":[{"name":"CCL6 production","type":"exact"}],"termid":"GO:0035530"}


id: PBO:0050911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 2","termid":"PBO:0050911"}


id: GO:0102976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-versicolorone + NADP+ = 1'-hydroxyversicolorone + H+ + NADPH.","definition_xrefs":["RHEA:35699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"versiconal reductase activity","secondary_identifiers":["MetaCyc:RXN-9491"],"termid":"GO:0102976"}


id: PBO:0052052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KANSL1L antisense RNA 1","termid":"PBO:0052052"}


id: FYPO:0003841
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is decreased. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PomBase:mah","GO:1902967","GO:1990023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle","termid":"FYPO:0002825"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle midzone","termid":"FYPO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle midzone","synonyms":[{"name":"decreased protein localisation to mitotic spindle midzone","type":"exact"},{"name":"decreased protein localization to mitotic spindle midzone during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle midzone during mitosis","type":"exact"},{"name":"decreased protein localization to spindle midzone during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle midzone","type":"exact"}],"termid":"FYPO:0003841"}


id: FYPO:0000955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing lead ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on lead ion","synonyms":[{"name":"normal cell population growth in presence of lead ion","type":"exact"},{"name":"normal cell population growth on lead ion","type":"exact"},{"name":"normal cellular response to lead ion","type":"related"},{"name":"normal vegetative cell population growth on lead ion","type":"exact"}],"termid":"FYPO:0000955"}


id: PR:Q9USW3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21B10.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USW3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosidase C21B10.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.07","synonyms":[{"name":"Spom972h-SPBC21B10.07","type":"exact"}],"termid":"PR:Q9USW3"}


id: PBO:0026944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_centromere_clustering_resulting_in_centromere-spindle_pole_body_colocalization","termid":"PBO:0026944"}


id: MOD:02003
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydroxy hydrogen atom of L-serine with an acyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O3-acylated L-serine","termid":"MOD:02003"}


id: MONDO:0021500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the spleen.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system organ benign neoplasm","termid":"MONDO:0000630"},{"relation_name":"is_a","term_name":"spleen neoplasm","termid":"MONDO:0036696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"benign neoplasm of spleen","secondary_identifiers":["NCIT:C4902","SCTID:92408009","UMLS:C0686615","MEDGEN:146355","ICD9:211.9"],"synonyms":[{"name":"benign neoplasm of the spleen","type":"exact"},{"name":"benign splenic neoplasm","type":"exact"},{"name":"spleen benign neoplasm","type":"exact"}],"termid":"MONDO:0021500","xrefs":{"Monarch":{"xref_id":"0021500"}}}


id: PR:P78870
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fmd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.07c","synonyms":[{"name":"FALDH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FDH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FLD 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GSH-FDH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fmd1","type":"exact"},{"name":"glutathione-dependent formaldehyde dehydrogenase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78870"}


id: MONDO:0034127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"IgA pemphigus","secondary_identifiers":["DOID:0080851","UMLS:C1274167","GARD:22242","MEDGEN:697519","Orphanet:555905"],"termid":"MONDO:0034127","xrefs":{"Monarch":{"xref_id":"0034127"}}}


id: MONDO:0017729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metachromatic leukodystrophy, juvenile form","termid":"MONDO:0009591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002039","MONDO:0005559","MONDO:0002561","MONDO:0002525","MONDO:0005244"],"is_obsolete":false,"name":"metachromatic leukodystrophy, late infantile form","secondary_identifiers":["UMLS:C0751278","MEDGEN:155529","GARD:21328","NANDO:2201202","NANDO:1200079","SCTID:47683004","Orphanet:309256"],"synonyms":[{"name":"MLD, late infantile form","type":"exact"},{"name":"arylsulfatase A deficiency, late infantile form","type":"exact"}],"termid":"MONDO:0017729","xrefs":{"Monarch":{"xref_id":"0017729"}}}


id: RO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two material entities in a system of connected structures, where the branching relationship holds based on properties of the connecting network.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_branching_relationship_with","termid":"RO:0002375"}


id: PBO:0065834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB8B, member RAS oncogene family","termid":"PBO:0065834"}


id: PBO:0040837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BIVM-ERCC5 readthrough","termid":"PBO:0040837"}


id: PBO:0060738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 3","termid":"PBO:0060738"}


id: PATO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches joined together in a series of prominent arches.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brochidodromous","termid":"PATO:0001970"}


id: PBO:0073378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sestrin 2","termid":"PBO:0073378"}


id: PBO:0052538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 11","termid":"PBO:0052538"}


id: FYPO:0003257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of proline into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal proline import","termid":"FYPO:0003256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased proline import","synonyms":[{"name":"decreased L-proline import","type":"exact"},{"name":"decreased L-proline import across plasma membrane","type":"exact"},{"name":"decreased proline import during mitotic cell cycle","type":"related"},{"name":"decreased proline import during vegetative growth","type":"exact"},{"name":"decreased proline import into cell","type":"exact"},{"name":"decreased proline uptake","type":"exact"},{"name":"reduced proline import","type":"exact"}],"termid":"FYPO:0003257"}


id: GO:0032953
data:
  {"annotated_genes":["SJAG_04666","SJAG_03705","SJAG_04668","SJAG_04771","SJAG_04659","SJAG_01787","SJAG_04462","SJAG_01255","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87308,92216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[105717,90563,117705,117830,105146,92200,102639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan biosynthetic process","termid":"GO:0032951"},{"relation_name":"is_a","term_name":"regulation of (1->3)-beta-D-glucan metabolic process","termid":"GO:0032952"},{"relation_name":"regulates","term_name":"(1->3)-beta-D-glucan biosynthetic process","termid":"GO:0006075"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01255":null,"SJAG_01787":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of 1,3-beta-glucan anabolism","type":"exact"},{"name":"regulation of 1,3-beta-glucan biosynthesis","type":"exact"},{"name":"regulation of 1,3-beta-glucan biosynthetic process","type":"broad"},{"name":"regulation of 1,3-beta-glucan formation","type":"exact"},{"name":"regulation of 1,3-beta-glucan synthesis","type":"exact"}],"termid":"GO:0032953","terms_by_termid":{"GO:0090334":null,"GO:0140748":null}}


id: FYPO:0006604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic tRNA transcription unit occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"decreased replication fork arrest at tRNA locus","synonyms":[{"name":"decreased replication fork arrest at tRNA genes","type":"exact"},{"name":"decreased replication fork arrest at tRNA locus during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at tRNA locus during vegetative growth","type":"exact"},{"name":"reduced replication fork arrest at tRNA locus","type":"exact"}],"termid":"FYPO:0006604"}


id: PR:Q9UTA8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase-like C25B8.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.10","synonyms":[{"name":"Spom972h-SPAC25B8.10","type":"exact"}],"termid":"PR:Q9UTA8"}


id: GO:0070226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a perthiol + 4 Fe3+ + 3 H2O = sulfite + a thiol + 4 Fe2+ + 8 H+.","definition_xrefs":["MetaCyc:SULFFEOXIDO-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfur:ferric ion oxidoreductase activity","synonyms":[{"name":"hydrogen sulfide:ferric ion oxidoreductase","type":"exact"}],"termid":"GO:0070226"}


id: GO:0070660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new inner ear sensory hair cells to replace those lost or destroyed by injury.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"},{"relation_name":"is_a","term_name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"},{"relation_name":"part_of","term_name":"inner ear sensory epithelium regeneration","termid":"GO:0070659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell differentiation involved in inner ear sensory epithelium regeneration","termid":"GO:0070660"}


id: PBO:0050106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 16","termid":"PBO:0050106"}


id: PBO:0082550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central component of the peroxisomal importomer complex; peroxisomal protein import machinery docking complex component; interacts with both PTS1 (Pex5p) and PTS2 (Pex7p) peroxisomal matrix protein signal recognition factors and membrane receptor Pex13p","termid":"PBO:0082550"}


id: PBO:0088531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase Yfh7","termid":"PBO:0088531"}


id: PATO:0000924
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000924 relative enzyme function (obsolete PATO:0000924)","termid":"PATO:0000924"}


id: PBO:0051141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-19 (pseudogene)","termid":"PBO:0051141"}


id: MONDO:0010135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial thyroid dyshormonogenesis in which the cause of the disease is a mutation in the TG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thyroid dyshormonogenesis","termid":"MONDO:0010132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyroid dyshormonogenesis 3","secondary_identifiers":["UMLS:C0342194","DOID:0112187","GARD:18190","MESH:C562769","OMIM:274700","MEDGEN:90976","SCTID:23536000"],"synonyms":[{"name":"TDH3","type":"exact"},{"name":"TG familial thyroid dyshormonogenesis","type":"exact"},{"name":"familial thyroid dyshormonogenesis caused by mutation in TG","type":"exact"},{"name":"hypothyroidism, congenital, due to dyshormonogenesis, 3","type":"exact"},{"name":"thyroid dyshormonogenesis 3","type":"exact"},{"name":"thyroid dyshormonogenesis type 3","type":"exact"},{"name":"thyroid hormonogenesis, genetic defect in, 3","type":"exact"}],"termid":"MONDO:0010135","xrefs":{"Monarch":{"xref_id":"0010135"}}}


id: MONDO:0008050
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85059,85060],"is_not":false,"summary":null,"term":"MONDO:0008050"}]},"cv_name":"mondo","definition":"Laing distal myopathy, also called myopathy distal, type 1 (MPD1), is characterized by early-onset selective weakness of the great toe and ankle dorsiflexors, and a very slowly progressive course.","definition_xrefs":["Orphanet:59135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of beta-myosin heavy chain (MYH7)","termid":"MONDO:0016195"},{"relation_name":"is_a","term_name":"distal myopathy","termid":"MONDO:0018949"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"MYH7-related skeletal myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070197","GARD:10769","UMLS:C4552004","OMIM:160500","MEDGEN:1647391","SCTID:764859001"],"synonyms":[{"name":"Gowers disease","type":"exact"},{"name":"Laing distal myopathy","type":"exact"},{"name":"Laing early-onset distal myopathy","type":"exact"},{"name":"MPD1","type":"exact"},{"name":"MYH7-related skeletal myopathy","type":"exact"},{"name":"distal myopathy type 1","type":"exact"},{"name":"myopathy distal, type 1","type":"related"},{"name":"myopathy, distal, 1","type":"related"},{"name":"myopathy, distal, early-onset, autosomal dominant","type":"related"},{"name":"myopathy, distal, type 1","type":"exact"},{"name":"myopathy, late distal hereditary","type":"related"},{"name":"myosin storage myopathy","type":"related"}],"termid":"MONDO:0008050","terms_by_termid":{"MONDO:0008050":null},"xrefs":{"Monarch":{"xref_id":"0008050"}}}


id: FYPO:0003964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glutathione disulfide oxidoreductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal glutathione disulfide oxidoreductase activity","termid":"FYPO:0003963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased glutathione disulfide oxidoreductase activity","synonyms":[{"name":"reduced glutathione disulfide oxidoreductase activity","type":"exact"}],"termid":"FYPO:0003964"}


id: PBO:0088233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog1","termid":"PBO:0088233"}


id: MONDO:0016075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic disease caused by tissue-invasive, vector-borne nematodes which can be found anywhere in the human body and that are transmitted to humans through the bite of an infected mosquito or fly or by consumption of unsafe drinking water and which, depending on the subtype can manifest with lymphedema, dermatitis, subcutaneous edema and eye involvement. The disorder is a major public health problem in many tropical and subtropical countries. Six subtypes have been described in the literature: lymphatic filariasis, onchocerciasis, loiasis, mansonelliasis, dirofilariasis and dracunculiasis caused by Wuchereria bancrofti and filarioidea of the genus Brugia; Onchocerca volvulus; Loa loa; Mansonella; Dirofilaria; and Dracunculus medinensis, respectively. Tropical eosinophilia is considered a frequent manifestation.","definition_xrefs":["Orphanet:2034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filariasis","secondary_identifiers":["ICD9:125.9","MedDRA:10016674","MEDGEN:4706","ICD10CM:B74","icd11.foundation:1975325075","MESH:D005368","NCIT:C34611","NORD:1148","SCTID:105706003","UMLS:C0016085","DOID:1080","GARD:18757"],"synonyms":[{"name":"disease due to superfamily Filarioidea","type":"exact"}],"termid":"MONDO:0016075","xrefs":{"Monarch":{"xref_id":"0016075"}}}


id: FYPO:0002454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable and have abnormal cell morphology (i.e. size, shape, or structure), in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population with abnormal cell morphology (obsolete FYPO:0002454)","termid":"FYPO:0002454"}


id: GO:0005672
data:
  {"annotated_genes":["SJAG_02174","SJAG_01710"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71926,78474],"is_not":false,"summary":null,"term":"GO:0005672"}]},"cv_name":"cellular_component","definition":"A component of the transcription machinery of RNA Polymerase II. In humans, TFIIA is a heterotrimer composed of an alpha (P35), beta (P19) and gamma subunits (P12).","definition_xrefs":["PMID:17560669","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01710":null,"SJAG_02174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIA complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005672","terms_by_termid":{"GO:0005672":null}}


id: GO:0046382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP-D-rhamnose, a substance composed of rhamnose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GDP-D-rhamnose metabolic process","synonyms":[{"name":"GDP-D-rhamnose metabolism","type":"exact"}],"termid":"GO:0046382"}


id: PBO:0084602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YLR391W was originally annotated as an independent ORF, but was completely contained in larger ORF YLR391W-A in the same frame, and was merged into it on 7-30-1997","termid":"PBO:0084602"}


id: PBO:0088153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Verprolin, proline-rich actin-associated protein; involved in cytoskeletal organization and cytokinesis; promotes actin nucleation and endocytosis; related to mammalian Wiskott-Aldrich syndrome protein (WASP)-interacting protein (WIP)","termid":"PBO:0088153"}


id: MONDO:0006244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biologic subset of breast carcinoma defined by high expression of HER2, GRB7, and TRAP100, and by lack of expression of estrogen receptor (ER).","definition_xrefs":["NCIT:C53556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"HER2 positive breast carcinoma","secondary_identifiers":["UMLS:C1960398","DOID:0060079","EFO:1000294","MEDGEN:743175","SCTID:427685000"],"synonyms":[{"name":"ERBB2 Overexpressing subtype of breast carcinoma","type":"exact"},{"name":"HER2 Overexpressing breast carcinoma","type":"exact"},{"name":"HER2 Overexpressing subtype of breast carcinoma","type":"exact"},{"name":"HER2 Positive breast cancer","type":"exact"},{"name":"HER2 positive breast carcinoma","type":"exact"},{"name":"Her2-receptor positive breast cancer","type":"exact"}],"termid":"MONDO:0006244","xrefs":{"Monarch":{"xref_id":"0006244"}}}


id: PBO:0002672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome component Ecm29","termid":"PBO:0002672"}


id: PBO:0082061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyanthranilic acid dioxygenase; required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p","termid":"PBO:0082061"}


id: MONDO:0015908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromomycosis is a chronic cutaneous and subcutaneous fungal infection, found mainly in subtropical and tropical areas (in soil and plant debris and transmitted by traumatic inoculation), and characterized clinically by slow growing, verrucous nodules, squamous plaques, or chronic limited lesions which are most commonly found on the lower limbs and which are characterized histologically by the presence of muriform cells. It is caused by dematiaceous fungi, with the main etiological agents being Fonsecaea pedrosoi, Phialophora verrucosa and Cladophialophora carrionii. Rarely, it can be caused by Rhinocladiella aquaspersa.","definition_xrefs":["Orphanet:182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subcutaneous mycosis","termid":"MONDO:0000255"},{"relation_name":"is_a","term_name":"dermatomycosis","termid":"MONDO:0002040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromomycosis","secondary_identifiers":["MESH:D002862","SCTID:187079000","ICD9:117.2","UMLS:C0008582","DOID:1562","MedDRA:10008803","GARD:1319","icd11.foundation:1438584733","EFO:0007207","MEDGEN:3434"],"synonyms":[{"name":"Chromoblastomycoses","type":"related"},{"name":"Chromomycoses","type":"related"},{"name":"Chromomycosis","type":"exact"},{"name":"chromoblastomycosis","type":"exact"},{"name":"chromomycosis","type":"exact"},{"name":"dermatitis Verrucosa","type":"related"},{"name":"mossy foot disease","type":"exact"}],"termid":"MONDO:0015908","xrefs":{"Monarch":{"xref_id":"0015908"}}}


id: PBO:0073914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC16A4 antisense RNA 1","termid":"PBO:0073914"}


id: PBO:0003230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kip3 subfamily","termid":"PBO:0003230"}


id: GO:0012507
data:
  {"annotated_genes":["SJAG_04023","SJAG_03907","SJAG_00284","SJAG_03558","SJAG_05345","SJAG_03153","SJAG_02539","SJAG_04513","SJAG_02349","SJAG_01633","SJAG_05344","SJAG_00906","SJAG_00072","SJAG_00557","SJAG_01939"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[67097,70201,73653,75801,100876],"is_not":false,"summary":null,"term":"GO:0012507"},{"annotations":[71148,76322,78196,74949,95302,71207,75360,76859,72853,74595],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle transporting substances from the endoplasmic reticulum to the Golgi.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"coated vesicle membrane","termid":"GO:0030662"},{"relation_name":"part_of","term_name":"COPII-coated ER to Golgi transport vesicle","termid":"GO:0030134"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00557":null,"SJAG_00906":null,"SJAG_01633":null,"SJAG_01939":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"ER to Golgi transport vesicle membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030664"],"synonyms":[{"name":"COPII coated vesicle membrane","type":"exact"},{"name":"ER to Golgi constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"ER-Golgi transport vesicle membrane","type":"exact"},{"name":"endoplasmic reticulum to Golgi transport vesicle membrane","type":"exact"},{"name":"endoplasmic reticulum-Golgi transport vesicle membrane","type":"exact"}],"termid":"GO:0012507","terms_by_termid":{"GO:0012507":null,"GO:0030127":null}}


id: PBO:0059756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 30","termid":"PBO:0059756"}


id: PBO:0064328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLS1 pseudogene 1","termid":"PBO:0064328"}


id: MONDO:0015091
data:
  {"annotated_genes":["SJAG_03457","SJAG_00660"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86289,86290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"}]},"cv_name":"mondo","definition":"Any autosomal dominant complex spastic paraplegia in which the cause of the disease is a mutation in the ALDH18A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"},{"relation_name":"is_a","term_name":"P5CS deficiency","termid":"MONDO:0100126"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0000426","MONDO:0004736","MONDO:0005559"],"is_obsolete":false,"name":"autosomal dominant spastic paraplegia type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:100990","UMLS:C1832669","MEDGEN:322007","icd11.foundation:1867328407"],"synonyms":[{"name":"ALDH18A1 autosomal dominant complex spastic paraplegia","type":"exact"},{"name":"SPG9","type":"exact"},{"name":"autosomal dominant complex spastic paraplegia caused by mutation in ALDH18A1","type":"exact"},{"name":"autosomal dominant spastic paraparesis","type":"related"},{"name":"bilateral cataracts, gastroesophageal reflux, and spastic paraparesis with amyotrophy","type":"related"},{"name":"cataracts, motor neuronopathy, short stature and skeletal abnormalities","type":"related"},{"name":"cataracts-motor neuropathy-short stature-skeletal anomalies syndrome","type":"exact"},{"name":"spastic paraparesis-amyopathy-cataracts-gastroesophageal reflux syndrome","type":"exact"},{"name":"spastic paraplegia 9","type":"related"}],"termid":"MONDO:0015091","terms_by_termid":{"MONDO:0011006":null},"xrefs":{"Monarch":{"xref_id":"0015091"}}}


id: PBO:0060983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycanase 1","termid":"PBO:0060983"}


id: PBO:0014287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, predicted GPI anchored","termid":"PBO:0014287"}


id: GO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When a branched chain family amino acid, leucine, isoleucine, or valine, is used as the substrate, 3-methylbutanoate, 2-methylbutanoate, or 2-methylpropanoate, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["PMID:18281432","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"branched-chain amino acid catabolic process to carboxylic acid via Ehrlich pathway","synonyms":[{"name":"branched chain family amino acid catabolic process to carboxylic acid via Ehrlich pathway","type":"exact"}],"termid":"GO:0000953"}


id: PBO:0038536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 12, lysophospholipase","termid":"PBO:0038536"}


id: PBO:0062276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 7 pseudogene","termid":"PBO:0062276"}


id: MONDO:0000226
data:
  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id: MONDO:0003303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing encapsulated neoplasm arising from nerves in the gallbladder. Morphologically, it is characterized by the presence of fibroblasts and Schwann cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder cancer","termid":"MONDO:0005411"},{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"neurofibroma of gallbladder","secondary_identifiers":["DOID:5150","UMLS:C1333751","MEDGEN:232540","NCIT:C5746"],"synonyms":[{"name":"gall bladder neurofibroma","type":"exact"},{"name":"gallbladder neurofibroma","type":"exact"},{"name":"neurofibroma of gall bladder","type":"exact"},{"name":"neurofibroma of gallbladder","type":"exact"},{"name":"neurofibroma of the gallbladder","type":"exact"}],"termid":"MONDO:0003303","xrefs":{"Monarch":{"xref_id":"0003303"}}}


id: FYPO:0000579
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119118,119121],"is_not":false,"summary":null,"term":"FYPO:0000579"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which spore germination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal spore germination","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01355","SJAG_00601"],"single_locus_genotype_uniquenames":["rip1delta","cox6delta"],"synonyms":[{"name":"normal spore germination frequency","type":"related"},{"name":"normal spore viability","type":"related"},{"name":"spore germination: normal","type":"related"}],"termid":"FYPO:0000579","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000579":null}}


id: MONDO:0014490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid and ketone body metabolism","termid":"MONDO:0019223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"ketoacidosis due to monocarboxylate transporter-1 deficiency","secondary_identifiers":["GARD:17733","OMIM:616095","UMLS:C4015186","Orphanet:438075","MEDGEN:863623"],"synonyms":[{"name":"MCT1D","type":"related"},{"name":"monocarboxylate transporter 1 deficiency","type":"related"}],"termid":"MONDO:0014490","xrefs":{"Monarch":{"xref_id":"0014490"}}}


id: GO:0008709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholate + NAD+ = -3alpha,12-alpha-dihydroxy-7-oxo--5beta-cholanate + H+ + NADH.","definition_xrefs":["RHEA:19409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cholate 7-alpha-dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R02792","MetaCyc:7-ALPHA-HYDROXYSTEROID-DEH-RXN","EC:1.1.1.159"],"synonyms":[{"name":"7-alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"7alpha-HSDH","type":"related"},{"name":"7alpha-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"7alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"7alpha-hydroxysteroid:NAD+ 7-oxidoreductase activity","type":"broad"}],"termid":"GO:0008709"}


id: SO:0001192
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases attached to a repeating unit made of an acyclic three-carbon propylene glycol connected to a phosphate backbone. It has two enantiomeric forms, (R)-GNA and (S)-GNA.","definition_xrefs":["CHEBI:48015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNA","termid":"SO:0001192"}


id: PR:O13876
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.11c","synonyms":[{"name":"Spom972h-ypt4","type":"exact"}],"termid":"PR:O13876"}


id: PBO:0041307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 27A","termid":"PBO:0041307"}


id: GO:0047023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione.","definition_xrefs":["EC:1.1.1.209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"androsterone dehydrogenase [NAD(P)+] activity","synonyms":[{"name":"3(17)alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3(or 17)-alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3(or 17)alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3(or 17)alpha-hydroxysteroid:NAD(P)+ oxidoreductase activity","type":"broad"}],"termid":"GO:0047023"}


id: FYPO:0001730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered level of substance in vacuole","termid":"FYPO:0001601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased level of substance in vacuole","synonyms":[{"name":"increased level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"increased level of substance in vacuole during vegetative growth","type":"exact"},{"name":"increased vacuolar level of substance","type":"exact"}],"termid":"FYPO:0001730"}


id: GO:0060240
data:
  {"annotated_genes":["SJAG_00990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the series signal transduction involved in conjugation with cellular fusion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060238"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"signal transduction involved in positive regulation of conjugation with cellular fusion","termid":"GO:0032005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000747","GO:0023052"],"is_obsolete":false,"name":"negative regulation of signal transduction involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060240","terms_by_termid":{"GO:0090029":null}}


id: PBO:0078490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 9-1","termid":"PBO:0078490"}


id: GO:0052204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the functional activity of proteins in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of molecular function in other organism involved in symbiotic interaction (obsolete GO:0052204)","synonyms":[{"name":"down regulation of protein function in other organism during symbiotic interaction","type":"exact"},{"name":"down-regulation of protein function in other organism during symbiotic interaction","type":"exact"},{"name":"downregulation of protein function in other organism during symbiotic interaction","type":"exact"},{"name":"inhibition of protein function in other organism","type":"exact"},{"name":"inhibition of protein function in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of protein function in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052204"}


id: PBO:0063972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 6","termid":"PBO:0063972"}


id: PR:A6X994
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC188.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C188.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.05","synonyms":[{"name":"Spom972h-SPCC188.05","type":"exact"}],"termid":"PR:A6X994"}


id: PBO:0001578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex subunit Swd1","termid":"PBO:0001578"}


id: PBO:0028481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-activation_of_monopolar_cell_growth_at_new_end","termid":"PBO:0028481"}


id: PBO:0057505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 623","termid":"PBO:0057505"}


id: PBO:0091164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit K","termid":"PBO:0091164"}


id: PBO:0026666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_cell","termid":"PBO:0026666"}


id: GO:0042150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of DNA recombination occurring within a plasmid or between plasmids and other plasmids or DNA molecules.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"plasmid recombination","termid":"GO:0042150"}


id: RO:0002455
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"mutualistically_interacts_with","termid":"RO:0002442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pollinates","termid":"RO:0002455"}


id: GO:1905937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of germ cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15342467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of germ cell proliferation","termid":"GO:1905936"},{"relation_name":"negatively_regulates","term_name":"germ cell proliferation","termid":"GO:0036093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of germ cell proliferation","synonyms":[{"name":"down regulation of germ cell proliferation","type":"exact"},{"name":"down-regulation of germ cell proliferation","type":"exact"},{"name":"downregulation of germ cell proliferation","type":"exact"},{"name":"inhibition of germ cell proliferation","type":"narrow"}],"termid":"GO:1905937"}


id: GO:0050126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoylputrescine + H2O + 2 H+ = CO2 + NH4 + putrescine.","definition_xrefs":["RHEA:22284","EC:3.5.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-carbamoylputrescine amidase activity","secondary_identifiers":["KEGG_REACTION:R01152","MetaCyc:N-CARBAMOYLPUTRESCINE-AMIDASE-RXN"],"synonyms":[{"name":"N-carbamoylputrescine amidohydrolase activity","type":"related"},{"name":"NCP","type":"related"},{"name":"carbamoylputrescine hydrolase activity","type":"related"}],"termid":"GO:0050126"}


id: RO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A part of relation that applies only between occurents.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"RO:0002418"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurent_part_of","termid":"RO:0002012"}


id: PBO:0056430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 3","termid":"PBO:0056430"}


id: GO:0032938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"regulation of translation in response to oxidative stress","termid":"GO:0043556"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation in response to oxidative stress","termid":"GO:0032938"}


id: FYPO:0007581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling occurs to a lower extent than normal during anaphase B of the mitotic cell cycle.","definition_xrefs":["PMID:19736319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septation initiation network signaling","termid":"FYPO:0007569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"decreased septation initiation network signaling during anaphase B","synonyms":[{"name":"decreased SIN signaling during anaphase B","type":"exact"},{"name":"decreased septation initiation network signaling during mitotic anaphase B","type":"exact"},{"name":"decreased septation initiation network signalling during anaphase B","type":"exact"},{"name":"decreased septation initiation signaling during anaphase B","type":"exact"},{"name":"reduced septation initiation network signaling during anaphase B","type":"exact"}],"termid":"FYPO:0007581"}


id: PBO:0053215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 12","termid":"PBO:0053215"}


id: MOD:00484
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:112#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized lysine biotinylated with biotin-LC-hydrazide, reduced","synonyms":[{"name":"OxLysBiotinRed","type":"related"},{"name":"Oxidized lysine biotinylated with biotin-LC-hydrazide, reduced","type":"related"}],"termid":"MOD:00484"}


id: GO:1904272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-tryptophan from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:21097500","GO_REF:0000075","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-tryptophan transmembrane transport","termid":"GO:1904556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"L-tryptophan import across plasma membrane","termid":"GO:1904272"}


id: PBO:0072488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 17","termid":"PBO:0072488"}


id: MONDO:0010431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the OFD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 10","secondary_identifiers":["DOID:0110981","MESH:C567582","GARD:15265","MEDGEN:440688","OMIM:300804","UMLS:C2749019"],"synonyms":[{"name":"JBTS10","type":"exact"},{"name":"Joubert syndrome 10","type":"exact"},{"name":"Joubert syndrome 10, X-linked recessive","type":"exact"},{"name":"Joubert syndrome caused by mutation in OFD1","type":"exact"},{"name":"Joubert syndrome type 10","type":"exact"},{"name":"OFD1 Joubert syndrome","type":"exact"}],"termid":"MONDO:0010431","xrefs":{"Monarch":{"xref_id":"0010431"}}}


id: GO:0036220
data:
  {"annotated_genes":["SJAG_03797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118399],"is_not":false,"summary":null,"term":"GO:0036220"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ITP + H2O = IMP + H+ + diphosphate.","definition_xrefs":["GOC:dgf","PMID:17899088","RHEA:29399","PMID:22531138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0047429"],"is_obsolete":false,"name":"ITP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.66","MetaCyc:RXN0-6382","KEGG_REACTION:R00720","Reactome:R-HSA-2509827"],"synonyms":[{"name":"ITP pyrophosphatase activity","type":"exact"},{"name":"inosine-5'-triphosphate pyrophosphohydrolase activity","type":"exact"}],"termid":"GO:0036220","terms_by_termid":{"GO:0036220":null}}


id: PBO:0034232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_intermediate","termid":"PBO:0034232"}


id: PBO:0051264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-82 (pseudogene)","termid":"PBO:0051264"}


id: GO:0061347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the outflow tract.","definition_xrefs":["GOC:dph","PMID:19056682","GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in outflow tract morphogenesis (obsolete GO:0061347)","termid":"GO:0061347"}


id: FYPO:0000373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of RNA modification is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased rate of RNA modification","synonyms":[{"name":"RNA modification: decreased rate","type":"related"},{"name":"decreased rate of RNA modification during mitotic cell cycle","type":"related"},{"name":"decreased rate of RNA modification during vegetative growth","type":"exact"},{"name":"reduced rate of RNA modification","type":"exact"}],"termid":"FYPO:0000373"}


id: PBO:0068187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 494","termid":"PBO:0068187"}


id: PBO:0068045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 350","termid":"PBO:0068045"}


id: MOD:00868
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a natural, non-standard encoded residue, such as N-formyl-L-methionine, L-selenocysteine, or L-pyrrolysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural residue","termid":"MOD:00009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural, non-standard encoded residue","termid":"MOD:00868"}


id: PBO:0054617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2022","termid":"PBO:0054617"}


id: GO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A generic term for parts of cells prepared by disruptive biochemical techniques.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete cell fraction (obsolete GO:0000267)","synonyms":[{"name":"cell fraction","type":"exact"}],"termid":"GO:0000267"}


id: MONDO:1012267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"androgen insensitivity syndrome, non-human animal","termid":"MONDO:1011919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen insensitivity syndrome, pig","secondary_identifiers":["OMIA:000991-9823"],"synonyms":[{"name":"AIS, pig","type":"exact"}],"termid":"MONDO:1012267","xrefs":{"Monarch":{"xref_id":"1012267"}}}


id: PBO:0054929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2343","termid":"PBO:0054929"}


id: PBO:0088606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear bridge Ish domain protein Les1","termid":"PBO:0088606"}


id: PBO:0071523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 26","termid":"PBO:0071523"}


id: MONDO:0009021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Toriello Carey syndrome is a multiple congenital anomaly syndrome characterized by craniofacial dysmorphic features, cerebral anomalies, swallowing difficulties, cardiac defects and hypotonia.","definition_xrefs":["Orphanet:3338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Toriello-Carey syndrome","secondary_identifiers":["MEDGEN:163225","MESH:C563127","OMIM:217980","SCTID:722477003","GARD:5225","UMLS:C0796184","icd11.foundation:147297969"],"synonyms":[{"name":"Toriello-Carey syndrome","type":"exact"},{"name":"agenesis of corpus callosum with facial anomalies and Robin sequence","type":"related"},{"name":"corpus callosum agenesis facial anomalies Robin sequence","type":"related"},{"name":"corpus callosum agenesis-blepharophimosis-Robin sequence syndrome","type":"exact"},{"name":"corpus callosum, agenesis of, with facial anomalies and ROBIN sequence","type":"related"}],"termid":"MONDO:0009021","xrefs":{"Monarch":{"xref_id":"0009021"}}}


id: FYPO:0000302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which a cell's response to mating pheromone is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal response to pheromone","synonyms":[{"name":"abnormal response to pheromone involved in conjugation with cellular fusion","type":"exact"},{"name":"defective response to pheromone","type":"exact"}],"termid":"FYPO:0000302"}


id: PBO:0077331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 68","termid":"PBO:0077331"}


id: GO:2001278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-leucine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"is_a","term_name":"regulation of L-leucine biosynthetic process","termid":"GO:2001276"},{"relation_name":"positively_regulates","term_name":"L-leucine biosynthetic process","termid":"GO:0009098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-leucine biosynthetic process","synonyms":[{"name":"positive regulation of L-leucine anabolism","type":"exact"},{"name":"positive regulation of L-leucine biosynthesis","type":"exact"},{"name":"positive regulation of L-leucine formation","type":"exact"},{"name":"positive regulation of L-leucine synthesis","type":"exact"},{"name":"positive regulation of leucine biosynthetic process","type":"broad"}],"termid":"GO:2001278"}


id: PBO:0070759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 15","termid":"PBO:0070759"}


id: PBO:0041865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 10","termid":"PBO:0041865"}


id: PBO:0090066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP binding protein Sgt1","termid":"PBO:0090066"}


id: FYPO:0002088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more exocytic vesicles than normal near the division septum while the cell is undergoing septum assembly.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic vesicles present in increased numbers","termid":"FYPO:0002086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"exocytic vesicles present in increased numbers at septum during septum assembly","synonyms":[{"name":"accumulation of exocytic vesicles at division septum during septum assembly","type":"related"},{"name":"additional exocytic vesicles present at division septum during septum assembly","type":"exact"},{"name":"exocytic vesicles present in greater numbers at division septum during septum assembly","type":"exact"},{"name":"exocytic vesicles present in increased numbers at division septum during mitotic telophase","type":"related"},{"name":"exocytic vesicles present in increased numbers at division septum during septum assembly during mitotic cell cycle","type":"related"},{"name":"exocytic vesicles present in increased numbers at division septum during septum assembly during vegetative growth","type":"exact"},{"name":"exocytic vesicles present in increased numbers at septum during septation","type":"broad"},{"name":"exocytotic vesicles present in increased numbers at division septum during septum assembly","type":"exact"},{"name":"extra exocytic vesicles at division septum during septum assembly","type":"exact"},{"name":"post-Golgi secretory vesicles present in increased numbers at division septum during septum assembly","type":"related"}],"termid":"FYPO:0002088"}


id: GO:1905923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of acetylcholine biosynthetic process.","definition_xrefs":["PMID:20164328","GOC:aruk","GOC:bc","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of acetylcholine metabolic process","termid":"GO:0060409"},{"relation_name":"is_a","term_name":"regulation of acetylcholine biosynthetic process","termid":"GO:1905921"},{"relation_name":"positively_regulates","term_name":"acetylcholine biosynthetic process","termid":"GO:0008292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acetylcholine biosynthetic process","synonyms":[{"name":"activation of acetylcholine anabolism","type":"narrow"},{"name":"activation of acetylcholine biosynthesis","type":"narrow"},{"name":"activation of acetylcholine biosynthetic process","type":"narrow"},{"name":"activation of acetylcholine formation","type":"narrow"},{"name":"activation of acetylcholine synthesis","type":"narrow"},{"name":"positive regulation of acetylcholine anabolism","type":"exact"},{"name":"positive regulation of acetylcholine biosynthesis","type":"exact"},{"name":"positive regulation of acetylcholine formation","type":"exact"},{"name":"positive regulation of acetylcholine synthesis","type":"exact"},{"name":"up regulation of acetylcholine anabolism","type":"exact"},{"name":"up regulation of acetylcholine biosynthesis","type":"exact"},{"name":"up regulation of acetylcholine biosynthetic process","type":"exact"},{"name":"up regulation of acetylcholine formation","type":"exact"},{"name":"up regulation of acetylcholine synthesis","type":"exact"},{"name":"up-regulation of acetylcholine anabolism","type":"exact"},{"name":"up-regulation of acetylcholine biosynthesis","type":"exact"},{"name":"up-regulation of acetylcholine biosynthetic process","type":"exact"},{"name":"up-regulation of acetylcholine formation","type":"exact"},{"name":"up-regulation of acetylcholine synthesis","type":"exact"},{"name":"upregulation of acetylcholine anabolism","type":"exact"},{"name":"upregulation of acetylcholine biosynthesis","type":"exact"},{"name":"upregulation of acetylcholine biosynthetic process","type":"exact"},{"name":"upregulation of acetylcholine formation","type":"exact"},{"name":"upregulation of acetylcholine synthesis","type":"exact"}],"termid":"GO:1905923"}


id: MONDO:0006575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete loiasis (obsolete MONDO:0006575)","termid":"MONDO:0006575","xrefs":{"Monarch":{"xref_id":"0006575"}}}


id: PBO:0059099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 5","termid":"PBO:0059099"}


id: PBO:0076907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transferrin","termid":"PBO:0076907"}


id: PBO:0089131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helper of TIM Hot15","termid":"PBO:0089131"}


id: PBO:0088260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex deubiquitinating submodule subunit Sgf73","termid":"PBO:0088260"}


id: MONDO:0022953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete delta-1-pyrroline-5-carboxylate dehydrogenase deficiency (obsolete MONDO:0022953)","termid":"MONDO:0022953","xrefs":{"Monarch":{"xref_id":"0022953"}}}


id: PBO:0077095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell immunoglobulin and mucin domain containing 4","termid":"PBO:0077095"}


id: MONDO:0975749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 125","secondary_identifiers":["OMIM:620926"],"termid":"MONDO:0975749","xrefs":{"Monarch":{"xref_id":"0975749"}}}


id: PBO:0035710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_perinuclear_region_of_cytoplasm_during_mitotic_interphase","termid":"PBO:0035710"}


id: MOD:00948
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-dephospho","termid":"MOD:00948"}


id: GO:0006139
data:
  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