# terms

id: GO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine into the bloodstream modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by norepinephrine","termid":"GO:0003061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by circulating norepinephrine","synonyms":[{"name":"increased force of heart contraction by circulating noradrenaline","type":"related"},{"name":"increased force of heart contraction by circulating norepinephrine","type":"exact"}],"termid":"GO:0003109"}


id: PBO:0050915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 1","termid":"PBO:0050915"}


id: PBO:0001211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil permease","termid":"PBO:0001211"}


id: PBO:0057499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 617","termid":"PBO:0057499"}


id: PBO:0054173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1546","termid":"PBO:0054173"}


id: PBO:0049017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6B pseudogene 2","termid":"PBO:0049017"}


id: MONDO:0020243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete colobomatous and areolar dystrophy (obsolete MONDO:0020243)","secondary_identifiers":["Orphanet:98665"],"termid":"MONDO:0020243","xrefs":{"Monarch":{"xref_id":"0020243"}}}


id: PBO:0051408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-40","termid":"PBO:0051408"}


id: PBO:0000890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein (predicted)","termid":"PBO:0000890"}


id: MONDO:0018454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of dysostosis that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete dysostosis of genetic origin (obsolete MONDO:0018454)","secondary_identifiers":["Orphanet:404568"],"synonyms":[{"name":"genetic dysostosis","type":"exact"}],"termid":"MONDO:0018454","xrefs":{"Monarch":{"xref_id":"0018454"}}}


id: GO:1903329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iron-sulfur cluster assembly.","definition_xrefs":["GO_REF:0000058","GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0016226","GO:0008150"],"is_obsolete":false,"name":"regulation of iron-sulfur cluster assembly","termid":"GO:1903329"}


id: PR:G2TRT8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1235.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C1235.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.18","synonyms":[{"name":"Spom972h-SPCC1235.18","type":"exact"}],"termid":"PR:G2TRT8"}


id: GO:0070817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the P-TEFb-cap methyltransferase complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"P-TEFb-cap methyltransferase complex localization","synonyms":[{"name":"P-TEFb-cap methyltransferase complex localisation","type":"exact"},{"name":"establishment and maintenance of P-TEFb-cap methyltransferase complex localization","type":"exact"}],"termid":"GO:0070817"}


id: PBO:0002842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc14 (predicted)","termid":"PBO:0002842"}


id: MONDO:0015298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pellucid marginal degeneration","secondary_identifiers":["MEDGEN:573069","Orphanet:137672","UMLS:C0339288","GARD:11895","icd11.foundation:1662005062"],"termid":"MONDO:0015298","xrefs":{"Monarch":{"xref_id":"0015298"}}}


id: PR:Q10280
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gaf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor gaf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1902.01","synonyms":[{"name":"Gaf-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gaf1","type":"exact"}],"termid":"PR:Q10280"}


id: MONDO:0100091
data:
  {"annotated_genes":["SJAG_01344","SJAG_03785","SJAG_05213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84971,84970,84972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009925"},{"annotations":[85685,85684,85686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008333"}]},"cv_name":"mondo","definition":"An inheritable form of pseudoxanthoma elasticum (PXE), that causes calcium and other minerals to accumulate in the elastic fibers of the skin, eyes, and blood vessels, and less frequently in other areas such as the digestive tract. PXE may cause the following symptoms: growth of yellowish bumps on the skin of the neck, under the arms, or in the groin area; reduced vision; periodic weakness in the legs (claudication); or bleeding in the gastrointestinal tract, particularly the stomach. A clinical diagnosis of PXE can be made when an individual is found to have both the characteristic eye findings and yellow bumps on the skin. ABCC6 is the only gene known to be associated with this condition. Currently, there is no treatment for this condition, but affected individuals may benefit from routine visits to an eye doctor who specializes in retinal disorders, and by having regular physical examinationswith their primary physician.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pseudoxanthoma elasticum (inherited or acquired)","termid":"MONDO:0024308"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"is_obsolete":false,"name":"inherited pseudoxanthoma elasticum","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1274225","MEDGEN:697574","GARD:9643"],"synonyms":[{"name":"inherited Gronblad Strandberg syndrome","type":"exact"},{"name":"inherited PXE","type":"exact"}],"termid":"MONDO:0100091","terms_by_termid":{"MONDO:0008333":null,"MONDO:0009925":null},"xrefs":{"Monarch":{"xref_id":"0100091"}}}


id: PBO:0030356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated_cell_during_cellular_hyperosmotic_response","termid":"PBO:0030356"}


id: PBO:0048369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 binding adaptor protein, transmembrane","termid":"PBO:0048369"}


id: FYPO:0006156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium arsenite (AsNaO2). Cells stop growing (and may die) at a concentration of sodium arsenite that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to sodium arsenite","synonyms":[{"name":"hypersensitive to sodium arsenite","type":"exact"},{"name":"sensitive to AsNaO2","type":"exact"},{"name":"sensitive to sodium arsenite during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium arsenite during vegetative growth","type":"exact"}],"termid":"FYPO:0006156"}


id: GO:0052671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeraniol + nucleoside triphosphate = all-trans-geranyl-geranyl monophosphate + nucleoside diphosphate.","definition_xrefs":["GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenol kinase activity","termid":"GO:0052673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"geranylgeraniol kinase activity","synonyms":[{"name":"geranylgeraniol phosphotransferase activity","type":"exact"}],"termid":"GO:0052671"}


id: FYPO:0001128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is lower than normal. The septation index is the proportion of the population undergoing septation at any given time, and is usually around 10% (varying between 7-15%) for wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased septation index","synonyms":[{"name":"decreased septation","type":"related"},{"name":"reduced septation index","type":"exact"}],"termid":"FYPO:0001128"}


id: PBO:0066750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 48","termid":"PBO:0066750"}


id: PBO:0001357
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin fusion degradation protein","termid":"PBO:0001357"}


id: MONDO:0017371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare head and neck neoplasia.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare head and neck tumor (obsolete MONDO:0017371)","secondary_identifiers":["Orphanet:290849"],"synonyms":[{"name":"rare head and neck neoplasia","type":"exact"},{"name":"rare head and neck neoplasm","type":"exact"}],"termid":"MONDO:0017371","xrefs":{"Monarch":{"xref_id":"0017371"}}}


id: PBO:0055863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 10","termid":"PBO:0055863"}


id: MOD:01767
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-131 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-131 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01767"}


id: PBO:0050471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA cluster antisense RNA 3","termid":"PBO:0050471"}


id: PBO:0073758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 12","termid":"PBO:0073758"}


id: PBO:0113562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex gamma subunit, Ost3","termid":"PBO:0113562"}


id: PBO:0077953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 11-1","termid":"PBO:0077953"}


id: PR:Q9USZ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C1306.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1306.02","secondary_identifiers":["UniProtKB:Q9USZ0"],"synonyms":[{"name":"Spom972h-WDR6","type":"exact"}],"termid":"PR:Q9USZ0"}


id: GO:1903708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hemopoiesis.","definition_xrefs":["PMID:20080761","GOC:TermGenie","GO_REF:0000058","GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of hemopoiesis","termid":"GO:1903706"},{"relation_name":"positively_regulates","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemopoiesis","synonyms":[{"name":"activation of blood cell biosynthesis","type":"narrow"},{"name":"activation of blood cell formation","type":"narrow"},{"name":"activation of haemopoiesis","type":"narrow"},{"name":"activation of hematopoiesis","type":"narrow"},{"name":"activation of hemopoiesis","type":"narrow"},{"name":"positive regulation of blood cell biosynthesis","type":"exact"},{"name":"positive regulation of blood cell formation","type":"exact"},{"name":"positive regulation of haemopoiesis","type":"exact"},{"name":"positive regulation of hematopoiesis","type":"exact"},{"name":"up regulation of blood cell biosynthesis","type":"exact"},{"name":"up regulation of blood cell formation","type":"exact"},{"name":"up regulation of haemopoiesis","type":"exact"},{"name":"up regulation of hematopoiesis","type":"exact"},{"name":"up regulation of hemopoiesis","type":"exact"},{"name":"up-regulation of blood cell biosynthesis","type":"exact"},{"name":"up-regulation of blood cell formation","type":"exact"},{"name":"up-regulation of haemopoiesis","type":"exact"},{"name":"up-regulation of hematopoiesis","type":"exact"},{"name":"up-regulation of hemopoiesis","type":"exact"},{"name":"upregulation of blood cell biosynthesis","type":"exact"},{"name":"upregulation of blood cell formation","type":"exact"},{"name":"upregulation of haemopoiesis","type":"exact"},{"name":"upregulation of hematopoiesis","type":"exact"},{"name":"upregulation of hemopoiesis","type":"exact"}],"termid":"GO:1903708"}


id: PBO:0061403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPR2 like, GATOR1 complex subunit","termid":"PBO:0061403"}


id: PBO:0074668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 54","termid":"PBO:0074668"}


id: GO:0006627
data:
  {"annotated_genes":["SJAG_01004","SJAG_02397","SJAG_02809","SJAG_04641","SJAG_03648","SJAG_04533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69614,76654,77872,79767,80041,102005],"is_not":false,"summary":null,"term":"GO:0006627"}]},"cv_name":"biological_process","definition":"The cleavage of peptide bonds in proteins, usually near the N terminus, contributing to the process of import into the mitochondrion. Several different peptidases mediate cleavage of proteins destined for different mitochondrial compartments.","definition_xrefs":["GOC:mcc","PMID:12191769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein processing","termid":"GO:0034982"},{"relation_name":"part_of","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01004":null,"SJAG_02397":null,"SJAG_02809":null,"SJAG_03648":null,"SJAG_04533":null,"SJAG_04641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0010467","GO:0006605","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"protein processing involved in protein targeting to mitochondrion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial processing","type":"broad"},{"name":"mitochondrial protein processing during import","type":"related"}],"termid":"GO:0006627","terms_by_termid":{"GO:0006627":null}}


id: PBO:0061742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin 1","termid":"PBO:0061742"}


id: PBO:0015661
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae AOS1","termid":"PBO:0015661"}


id: GO:0010941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell death (obsolete GO:0010941)","termid":"GO:0010941"}


id: PBO:0004249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid-CoA ligase","termid":"PBO:0004249"}


id: MONDO:0030298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioedema, hereditary, 8","secondary_identifiers":["OMIM:619367","MEDGEN:1780930","UMLS:C5543528"],"synonyms":[{"name":"HAE8","type":"exact"},{"name":"angioedema, hereditary, 8","type":"exact"}],"termid":"MONDO:0030298","xrefs":{"Monarch":{"xref_id":"0030298"}}}


id: GO:1904288
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BAT3 complex.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bf","PMID:23246001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"BAT3 complex binding","synonyms":[{"name":"BAG6-UBL4A-TRC35 complex binding","type":"exact"},{"name":"BAT3-TRC35-UBL4A complex binding","type":"related"},{"name":"Bag6 complex binding","type":"exact"}],"termid":"GO:1904288"}


id: PBO:0087018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide reductase inhibitor; involved in regulating dNTP production; regulated by Mec1p and Rad53p during DNA damage and S phase; SML1 has a paralog, DIF1, that arose from the whole genome duplication","termid":"PBO:0087018"}


id: PBO:0052855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-12","termid":"PBO:0052855"}


id: PBO:0040277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATOSB pseudogene 1","termid":"PBO:0040277"}


id: SO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single stranded oligo used for polymerase chain reaction.","direct_ancestors":[{"relation_name":"has_quality","term_name":"forward","termid":"SO:0001030"},{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forward_primer","synonyms":[{"name":"DNA forward primer","type":"exact"},{"name":"forward DNA primer","type":"exact"},{"name":"forward primer","type":"exact"},{"name":"forward primer oligo","type":"exact"},{"name":"forward primer oligonucleotide","type":"exact"},{"name":"forward primer polynucleotide","type":"exact"},{"name":"forward primer sequence","type":"exact"}],"termid":"SO:0000121"}


id: FYPO:0006020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is abnormal.","definition_xrefs":["PMID:28366642","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered spatial extent of protein localization to chromatin","termid":"FYPO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein distribution along RNA polymerase II-transcribed genes","synonyms":[{"name":"abnormal protein distribution across RNA polymerase II-transcribed genes","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-regulated genes","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during mitotic cell cycle","type":"related"},{"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during vegetative growth","type":"exact"},{"name":"abnormal protein distribution in chromatin along RNA polymerase II-transcribed genes","type":"exact"},{"name":"abnormal protein localization to chromatin along RNA polymerase II-transcribed genes","type":"exact"}],"termid":"FYPO:0006020"}


id: GO:0047694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: barbiturate + H2O = malonate + urea.","definition_xrefs":["MetaCyc:BARBITURASE-RXN","EC:3.5.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"barbiturase activity","secondary_identifiers":["RHEA:18653"],"synonyms":[{"name":"barbiturate amidohydrolase (3-oxo-3-ureidopropanoate-forming)","type":"related"}],"termid":"GO:0047694"}


id: PBO:0110063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding TFAR19-related protein, human Programmed cell death protein 5 ortholog, implicated in DNA repair","termid":"PBO:0110063"}


id: PBO:0057856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3167","termid":"PBO:0057856"}


id: PBO:0041978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC18 antisense RNA 1","termid":"PBO:0041978"}


id: FYPO:0004258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein tyrosine phosphorylation during cellular response to hydroxyurea (obsolete FYPO:0004258)","synonyms":[{"name":"decreased peptidyl-tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein tyrosine phosphorylation during cellular response to HU","type":"exact"},{"name":"decreased protein tyrosine phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein tyrosine phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"decreased tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004258"}


id: GO:0097620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxy-2-phenylacetate + acceptor = phenylglyoxylate + reduced acceptor.","definition_xrefs":["RHEA:43112","PMID:1731758","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(R)-mandelate dehydrogenase activity","synonyms":[{"name":"D-mandelate dehydrogenase activity","type":"exact"}],"termid":"GO:0097620"}


id: PBO:0053109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase 1","termid":"PBO:0053109"}


id: MONDO:0006529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bullous skin disease (obsolete MONDO:0006529)","termid":"MONDO:0006529","xrefs":{"Monarch":{"xref_id":"0006529"}}}


id: PBO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-O ortholog Mal2","termid":"PBO:0002405"}


id: MONDO:0016870
data:
  {"annotated_genes":["SJAG_03424","SJAG_01548"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85520,85521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 5 disorder","termid":"MONDO:0700012"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01548":null,"SJAG_03424":null},"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1825959","Orphanet:261786","GARD:20793","UMLS:C5679649"],"synonyms":[{"name":"partial deletion of chromosome type 5","type":"exact"},{"name":"partial monosomy of chromosome 5","type":"exact"}],"termid":"MONDO:0016870","terms_by_termid":{"MONDO:0007925":null},"xrefs":{"Monarch":{"xref_id":"0016870"}}}


id: PATO:0001882
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a slug.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limaciform","termid":"PATO:0001882"}


id: PATO:0001332
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a bearer by virtue of the bearer's lack of distinct morphology.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amorphous","termid":"PATO:0001332"}


id: GO:0018299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a Rieske 4Fe-4S iron-sulfur cluster via bis-L-cysteinyl bis-L-histidino diiron disulfide.","definition_xrefs":["RESID:AA0225"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into the Rieske iron-sulfur cluster via bis-L-cysteinyl bis-L-histidino diiron disulfide (obsolete GO:0018299)","synonyms":[{"name":"iron incorporation into the Rieske iron-sulphur cluster via bis-L-cysteinyl bis-L-histidino diiron disulphide","type":"exact"}],"termid":"GO:0018299"}


id: MONDO:0002109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the pituitary gland. Representative examples include functioning or non-functioning carcinomas arising from the anterior lobe of the pituitary gland, chordomas, chondrosarcomas, and metastatic carcinomas from the breast, lung, and gastrointestinal tract.","definition_xrefs":["NCIT:C4769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull cancer","termid":"MONDO:0002132"},{"relation_name":"is_a","term_name":"reproductive system cancer","termid":"MONDO:0002149"},{"relation_name":"is_a","term_name":"thalamic cancer","termid":"MONDO:0003766"},{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"},{"relation_name":"is_a","term_name":"malignant endocrine neoplasm","termid":"MONDO:0021069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pituitary cancer","secondary_identifiers":["EFO:0005578","DOID:1785","SCTID:363482009","MEDGEN:96922","UMLS:C0496842"],"synonyms":[{"name":"cancer of pituitary gland","type":"exact"},{"name":"malignant neoplasm of pituitary","type":"exact"},{"name":"malignant neoplasm of pituitary gland","type":"exact"},{"name":"malignant neoplasm of the pituitary","type":"exact"},{"name":"malignant neoplasm of the pituitary gland","type":"exact"},{"name":"malignant pituitary gland neoplasm","type":"exact"},{"name":"malignant pituitary gland tumor","type":"exact"},{"name":"malignant pituitary gland tumour","type":"exact"},{"name":"malignant pituitary neoplasm","type":"exact"},{"name":"malignant pituitary tumor","type":"exact"},{"name":"malignant pituitary tumour","type":"exact"},{"name":"malignant tumor of pituitary","type":"exact"},{"name":"malignant tumor of pituitary gland","type":"exact"},{"name":"malignant tumor of the pituitary","type":"exact"},{"name":"malignant tumor of the pituitary gland","type":"exact"},{"name":"malignant tumour of pituitary","type":"exact"},{"name":"malignant tumour of pituitary gland","type":"exact"},{"name":"malignant tumour of the pituitary","type":"exact"},{"name":"malignant tumour of the pituitary gland","type":"exact"},{"name":"pituitary cancer","type":"exact"},{"name":"pituitary gland cancer","type":"exact"},{"name":"pituitary gland neoplasm","type":"broad"},{"name":"pituitary neoplasm","type":"broad"},{"name":"pituitary neoplasms, malignant","type":"exact"},{"name":"pituitary tumor, malignant","type":"exact"}],"termid":"MONDO:0002109","xrefs":{"Monarch":{"xref_id":"0002109"}}}


id: PBO:0062946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 4","termid":"PBO:0062946"}


id: PBO:0051438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-22","termid":"PBO:0051438"}


id: PBO:0076440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAF12 divergent transcript","termid":"PBO:0076440"}


id: PBO:0086105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of respiratory complex III; mitochondrial inner membrane protein; required for an early step in assembly of respiratory complex III (cytochrome bc1 complex); mRNA is targeted to mitochondria","termid":"PBO:0086105"}


id: PATO:0001476
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased position","synonyms":[{"name":"low position","type":"related"}],"termid":"PATO:0001476"}


id: PBO:0005313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Atg20 (predicted)","termid":"PBO:0005313"}


id: PBO:0004447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain protein","termid":"PBO:0004447"}


id: GO:0000409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving galactose that modulates the frequency, rate or extent or transcription.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"regulation of transcription by galactose","termid":"GO:0000409"}


id: PBO:0005085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional prefoldin involved in translation initiation (predicted)","termid":"PBO:0005085"}


id: FYPO:0004862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form microtubules that are curved, i.e. follow a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"curved microtubules","synonyms":[{"name":"curved microtubules during mitotic cell cycle","type":"related"},{"name":"curved microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004862"}


id: GO:0060382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of DNA strand elongation. DNA strand elongation is the DNA metabolic process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA strand elongation","termid":"GO:0022616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA strand elongation","termid":"GO:0060382"}


id: PBO:0088050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin ligase that modifies and regulates RNA Pol II; involved in a putative alcohol-responsive signaling pathway; accumulates in the nucleus under alcohol stress; has a role in organization of septins and the actin cytoskeleton; contains a Ring/PHD finger domain similar to the mammalian rA9 protein","termid":"PBO:0088050"}


id: PBO:0083382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps CUP1-1","termid":"PBO:0083382"}


id: PBO:0058887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10524","termid":"PBO:0058887"}


id: PBO:0067681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 868, pseudogene","termid":"PBO:0067681"}


id: GO:0120544
data:
  {"annotated_genes":["SJAG_04745","SJAG_02336","SJAG_00930","SJAG_00773","SJAG_01297","SJAG_00766","SJAG_01131","SJAG_00938","SJAG_02431","SJAG_00332","SJAG_04477","SJAG_00712","SJAG_03011","SJAG_02286","SJAG_00042","SJAG_00851","SJAG_01489","SJAG_04566","SJAG_01546","SJAG_01613","SJAG_04001","SJAG_01530","SJAG_01544","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74121,76447,70855,69768,79359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000146"},{"annotations":[61312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003777"},{"annotations":[96321,112573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008568"},{"annotations":[94572,66088,96575,99042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008569"},{"annotations":[103344,103544,75725,75483,108065,77504,78551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008574"},{"annotations":[79258,76901,78971,73458,77931,78081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036402"}]},"cv_name":"molecular_function","definition":"Catalysis of a reaction that alters the conformation or assembly of a polypeptide.","definition_xrefs":["EC:5.6.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecular conformation isomerase activity","termid":"GO:0120543"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00332":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_00938":null,"SJAG_01131":null,"SJAG_01297":null,"SJAG_01489":null,"SJAG_01530":null,"SJAG_01544":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_03011":null,"SJAG_03703":null,"SJAG_04001":null,"SJAG_04477":null,"SJAG_04566":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"polypeptide conformation or assembly isomerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0120544","terms_by_termid":{"GO:0000146":null,"GO:0003777":null,"GO:0008568":null,"GO:0008569":null,"GO:0008574":null,"GO:0036402":null}}


id: GO:1901276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tartrate.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"tartrate metabolic process","termid":"GO:1901275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tartrate catabolic process","synonyms":[{"name":"tartrate breakdown","type":"exact"},{"name":"tartrate catabolism","type":"exact"},{"name":"tartrate degradation","type":"exact"}],"termid":"GO:1901276"}


id: GO:0046513
data:
  {"annotated_genes":["SJAG_02085","SJAG_04178","SJAG_02305","SJAG_01219","SJAG_02842","SJAG_01057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73971,76678,77807,78716,78876,108615],"is_not":false,"summary":null,"term":"GO:0046513"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide metabolic process","termid":"GO:0006672"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01057":null,"SJAG_01219":null,"SJAG_02085":null,"SJAG_02305":null,"SJAG_02842":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ceramide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ceramide anabolism","type":"exact"},{"name":"ceramide biosynthesis","type":"exact"},{"name":"ceramide formation","type":"exact"},{"name":"ceramide synthesis","type":"exact"}],"termid":"GO:0046513","terms_by_termid":{"GO:0046513":null}}


id: MONDO:0011620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaphyseal dysplasia, Braun-Tinschert type is characterized by metapyhseal undermodeling with broadening of the long bones and femora with an 'Erlenmeyer flask'' appearance, expansion and bowing of the radii with severe varus deformity and flat exostoses of the long bones at the metadiaphyseal junctions.","definition_xrefs":["Orphanet:85188"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal dysplasia, Braun-Tinschert type","secondary_identifiers":["OMIM:605946","SCTID:717221005","UMLS:C1853825","MESH:C565271","GARD:16738","MEDGEN:381277"],"synonyms":[{"name":"metaphyseal dysplasia, Braun-Tinschert type","type":"exact"}],"termid":"MONDO:0011620","xrefs":{"Monarch":{"xref_id":"0011620"}}}


id: MONDO:0859281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with autism and dysmorphic facies","secondary_identifiers":["MEDGEN:1823979","UMLS:C5774206","OMIM:620021"],"termid":"MONDO:0859281","xrefs":{"Monarch":{"xref_id":"0859281"}}}


id: GO:0017087
data:
  {"annotated_genes":["SJAG_04641","SJAG_02397"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105382,112978],"is_not":false,"summary":null,"term":"GO:0017087"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of a regulatory subunit (alpha-MPP) and a catalytic subunit (beta-MPP) that catalyzes the release of N-terminal targeting peptides from precursor proteins imported into the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"endopeptidase complex","termid":"GO:1905369"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02397":null,"SJAG_04641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0032991","GO:0005739","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial processing peptidase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017087","terms_by_termid":{"GO:0017087":null}}


id: PBO:0000690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two-component GAP Byr4","termid":"PBO:0000690"}


id: GO:0032622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-19 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-19 production","secondary_identifiers":["GO:0042236","GO:0072617"],"synonyms":[{"name":"IL-19 production","type":"exact"},{"name":"IL-19 secretion","type":"narrow"},{"name":"ZMDA1 secretion","type":"narrow"},{"name":"interleukin-19 biosynthetic process","type":"narrow"},{"name":"interleukin-19 secretion","type":"narrow"}],"termid":"GO:0032622"}


id: PBO:0091603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phospholipase C Pgc1","termid":"PBO:0091603"}


id: PBO:0056636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 13 pseudogene 1","termid":"PBO:0056636"}


id: MONDO:8000004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discitis caused by infection with Salmonella.","definition_xrefs":["PMID:27070599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salmonellosis","termid":"MONDO:0000827"},{"relation_name":"is_a","term_name":"bacterial arthritis","termid":"MONDO:0004471"},{"relation_name":"is_a","term_name":"infectious discitis","termid":"MONDO:8000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salmonella discitis","termid":"MONDO:8000004","xrefs":{"Monarch":{"xref_id":"8000004"}}}


id: MONDO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A reactive inflammatory disorder affecting the bladder. It is characterized by the development of small cysts in the bladder wall. The cysts are lined by metaplastic glandular cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic cystitis","termid":"MONDO:0006030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glandular cystitis","secondary_identifiers":["UMLS:C0268837","MEDGEN:82830","DOID:2392","NCIT:C39860","ICD9:595.89","SCTID:72815004"],"synonyms":[{"name":"cystitis glandularis","type":"related"}],"termid":"MONDO:0002287","xrefs":{"Monarch":{"xref_id":"0002287"}}}


id: PBO:0004531
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.15","termid":"PBO:0004531"}


id: MONDO:0011364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the STRC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 16","secondary_identifiers":["MEDGEN:350211","MESH:C566339","UMLS:C1863561","DOID:0110471","OMIM:603720","GARD:22597"],"synonyms":[{"name":"DFNB16","type":"narrow"},{"name":"STRC autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in STRC","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 16","type":"exact"},{"name":"deafness, autosomal recessive 16","type":"narrow"},{"name":"deafness, autosomal recessive type 16","type":"narrow"}],"termid":"MONDO:0011364","xrefs":{"Monarch":{"xref_id":"0011364"}}}


id: PBO:0086493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative phosphatidylinositol/phosphatidylcholine transfer protein; possibly involved in lipid metabolism; localizes to the nucleus; contains a CRAL/TRIO domain and binds several lipids in a large-scale study; YKL091C has a paralog, SEC14, that arose from the whole genome duplication","termid":"PBO:0086493"}


id: GO:0097201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["PMID:16556235","PMID:18086556","PMID:18627600","GOC:rn","PMID:11027285","PMID:15575969"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to stress (obsolete GO:0097201)","termid":"GO:0097201"}


id: MONDO:0026767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 74, COVID-19-related, X-linked","secondary_identifiers":["MEDGEN:1768360","OMIM:301051","UMLS:C5435745","DOID:0112063"],"synonyms":[{"name":"IMD74","type":"related"},{"name":"IMMUNODEFICIENCY 74, COVID19-RELATED, X-LINKED","type":"related"},{"name":"TLR7 deficiency","type":"related"},{"name":"immunodeficiency 74, COVID19-related, X-linked, X-linked recessive","type":"exact"},{"name":"respiratory insufficiency due to SARS-CoV-2 viral infection","type":"related"}],"termid":"MONDO:0026767","xrefs":{"Monarch":{"xref_id":"0026767"}}}


id: GO:0099061
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic density membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic density membrane (obsolete GO:0099061)","termid":"GO:0099061"}


id: PBO:0050142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 2","termid":"PBO:0050142"}


id: PBO:0027750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_nitrogen_starvation","termid":"PBO:0027750"}


id: GO:2000942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amylopectin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"amylopectin metabolic process","termid":"GO:2000896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amylopectin metabolic process","synonyms":[{"name":"regulation of Amylopectin metabolism","type":"exact"}],"termid":"GO:2000942"}


id: MONDO:0003445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma that arises from the extrahepatic bile ducts. It is classified as papillary, tubular, or tubulopapillary.","definition_xrefs":["NCIT:C5857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct adenoma","termid":"MONDO:0006108"},{"relation_name":"is_a","term_name":"extrahepatic bile duct neoplasm","termid":"MONDO:0021385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"extrahepatic bile duct adenoma","secondary_identifiers":["UMLS:C1331534","DOID:5438","MEDGEN:233098"],"synonyms":[{"name":"adenoma of extrahepatic bile duct","type":"exact"},{"name":"adenoma of the extrahepatic bile duct","type":"exact"},{"name":"extrahepatic bile duct adenoma","type":"exact"}],"termid":"MONDO:0003445","xrefs":{"Monarch":{"xref_id":"0003445"}}}


id: PR:O94728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1604.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.16c","synonyms":[{"name":"Spom972h-SPBC1604.16c","type":"exact"}],"termid":"PR:O94728"}


id: GO:0042943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-amino acids from one side of a membrane to the other. D-amino acids are the D-enantiomers of amino acids.","definition_xrefs":["GOC:jl","GOC:jsg","GOC:mtg_transport","ISBN:0815340729","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"D-amino acid transmembrane transporter activity","synonyms":[{"name":"D-amino acid transporter activity","type":"broad"}],"termid":"GO:0042943"}


id: PBO:0090966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP Gyp10","termid":"PBO:0090966"}


id: FYPO:0002873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum in the normal orientation perpendicular the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal septum location","termid":"FYPO:0002253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal septum orientation","synonyms":[{"name":"normal septum orientation during mitotic cell cycle","type":"related"},{"name":"normal septum orientation during vegetative growth","type":"exact"},{"name":"normal septum position","type":"related"}],"termid":"FYPO:0002873"}


id: GO:0032881
data:
  {"annotated_genes":["SJAG_04668","SJAG_01376","SJAG_01787","SJAG_04659","SJAG_04509","SJAG_01255","SJAG_04462","SJAG_04771","SJAG_00424","SJAG_00963","SJAG_04666","SJAG_00610","SJAG_02278","SJAG_03705"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76983,78687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[92216,87308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[87686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[90563,105717,117830,102639,92200,105146,117705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[94732,92222,89227,102641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving polysaccharides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_00963":null,"SJAG_01255":null,"SJAG_01376":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of polysaccharide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032881","terms_by_termid":{"GO:0032951":null,"GO:0045719":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0015121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: phosphoenolpyruvate(out) + phosphate(in) = phosphoenolpyruvate(in) + phosphate(out).","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"},{"relation_name":"is_a","term_name":"phosphoenolpyruvate transmembrane transporter activity","termid":"GO:0089721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"phosphoenolpyruvate:phosphate antiporter activity","synonyms":[{"name":"PPT","type":"broad"},{"name":"phosphoenolpyruvate/phosphate translocator","type":"exact"}],"termid":"GO:0015121"}


id: PBO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase (predicted)","termid":"PBO:0001856"}


id: PBO:0053737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 960","termid":"PBO:0053737"}


id: PBO:0040022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 10","termid":"PBO:0040022"}


id: GO:0048031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a trisaccharide. Trisaccharides are sugars composed of three monosaccharide units.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"trisaccharide binding","termid":"GO:0048031"}


id: GO:0039557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway by reducing the activity of IRF7 (interferon regulatory factor-7). IRF7 a transcription factor in the RIG-I/MDA-5 signaling pathway. Viral infection triggers phosphorylation of cytoplasmic IRF7, which allows IRF7 to form a homodimer, migrate to the nucleus, and activate transcription of IFN-alpha and IFN-beta genes.","definition_xrefs":["PMID:11943871","PMID:16014964","PMID:19557165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF7 activity","secondary_identifiers":["VZ:653"],"synonyms":[{"name":"inhibition of host IRF7 by virus","type":"related"},{"name":"inhibition of host interferon regulatory factor-7 by virus","type":"related"},{"name":"suppression by virus of host IRF7 activity","type":"related"},{"name":"suppression by virus of host interferon regulatory factor 7 activity","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF7 activity","type":"narrow"}],"termid":"GO:0039557"}


id: FYPO:0005418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a gene product (usually a protein) that normally has ATPase activator activity has no activity in a mutant. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished ATPase activator activity","synonyms":[{"name":"ATPase activator activity abolished","type":"exact"}],"termid":"FYPO:0005418"}


id: PBO:0063175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenazine biosynthesis like protein domain containing","termid":"PBO:0063175"}


id: MONDO:0018699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pseudohypoparathyroidism with Albright hereditary osteodystrophy (obsolete MONDO:0018699)","secondary_identifiers":["Orphanet:457059"],"termid":"MONDO:0018699","xrefs":{"Monarch":{"xref_id":"0018699"}}}


id: PBO:0006310
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level","termid":"PBO:0006310"}


id: FYPO:0008326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 in regions containing protein-coding genes occurs to a greater extent than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000879"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at protein coding gene during vegetative growth","termid":"FYPO:0003102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at protein coding gene during vegetative growth","termid":"FYPO:0008326"}


id: PBO:0090018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Lea1","termid":"PBO:0090018"}


id: GO:0033750
data:
  {"annotated_genes":["SJAG_00753","SJAG_01358","SJAG_01449","SJAG_03299","SJAG_03729","SJAG_00178","SJAG_04940","SJAG_00471","SJAG_01013","SJAG_04721","SJAG_04379","SJAG_01391","SJAG_02274","SJAG_01339","SJAG_01065","SJAG_03012","SJAG_03593","SJAG_04148","SJAG_02210","SJAG_02250","SJAG_03882","SJAG_02757","SJAG_03719","SJAG_01338","SJAG_04308"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76430,99442,117473,76785,116019,76000,80037,105551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000055"},{"annotations":[69643,76001,70117,80038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000056"},{"annotations":[71203,93785,88796,91517,94773,100214,79137,105187,95916,110224,76218,111237,101194,105961,103737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000054"}]},"cv_name":"biological_process","definition":"A process in which a ribosome is transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_00471":null,"SJAG_00753":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01338":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01391":null,"SJAG_01449":null,"SJAG_02210":null,"SJAG_02250":null,"SJAG_02274":null,"SJAG_02757":null,"SJAG_03012":null,"SJAG_03299":null,"SJAG_03593":null,"SJAG_03719":null,"SJAG_03729":null,"SJAG_03882":null,"SJAG_04148":null,"SJAG_04308":null,"SJAG_04379":null,"SJAG_04721":null,"SJAG_04940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"ribosome localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0033753"],"synonyms":[{"name":"establishment of ribosome localisation","type":"related"},{"name":"establishment of ribosome localization","type":"related"},{"name":"ribosome localisation","type":"related"}],"termid":"GO:0033750","terms_by_termid":{"GO:0000054":null,"GO:0000055":null,"GO:0000056":null}}


id: PBO:0058816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7973-2","termid":"PBO:0058816"}


id: MONDO:0004503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the upper clivus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clivus meningioma","termid":"MONDO:0003908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upper clivus meningioma","secondary_identifiers":["DOID:8221","MEDGEN:234454","UMLS:C1336871","NCIT:C5290"],"synonyms":[{"name":"meningioma of the upper clivus","type":"exact"},{"name":"meningioma of upper clivus","type":"exact"}],"termid":"MONDO:0004503","xrefs":{"Monarch":{"xref_id":"0004503"}}}


id: GO:0001787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a natural killer cell population by cell division.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell activation","termid":"GO:0030101"},{"relation_name":"is_a","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell proliferation","synonyms":[{"name":"NK cell proliferation","type":"exact"}],"termid":"GO:0001787"}


id: PBO:0039497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A20, pseudogene","termid":"PBO:0039497"}


id: FYPO:0001557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethionine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to ethionine","synonyms":[{"name":"resistance to DL-ethionine","type":"related"},{"name":"resistance to S-ethylhomocysteine","type":"exact"},{"name":"resistance to ethionine during mitotic cell cycle","type":"related"},{"name":"resistance to ethionine during vegetative growth","type":"exact"},{"name":"resistant to ethionine","type":"exact"}],"termid":"FYPO:0001557"}


id: MONDO:0003030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare sarcoma that arises from the cervix. This category includes low grade endometrioid stromal sarcoma and undifferentiated endocervical sarcoma.","definition_xrefs":["NCIT:C40220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrioid stromal and related neoplasms of the cervix","termid":"MONDO:0003031"},{"relation_name":"is_a","term_name":"endometrioid stromal sarcoma","termid":"MONDO:0006745"},{"relation_name":"is_a","term_name":"sarcoma of cervix uteri","termid":"MONDO:0016280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrioid stromal sarcoma of the cervix","secondary_identifiers":["DOID:4520","UMLS:C3642326","MEDGEN:770966"],"synonyms":[{"name":"cervical endometrial stromal sarcoma","type":"related"},{"name":"endometrial stromal sarcoma of the cervix","type":"exact"},{"name":"endometrioid stromal sarcoma of the cervix","type":"exact"},{"name":"endometrioid stromal sarcoma of uterine cervix","type":"exact"},{"name":"uterine cervix endometrioid stromal sarcoma","type":"exact"}],"termid":"MONDO:0003030","xrefs":{"Monarch":{"xref_id":"0003030"}}}


id: PBO:0028038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_disassembly","termid":"PBO:0028038"}


id: GO:0097635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the autophagosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","GOC:autophagy"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of autophagosome membrane (obsolete GO:0097635)","synonyms":[{"name":"autophagic vacuole peripheral membrane","type":"related"},{"name":"extrinsic component of autophagic vacuole membrane","type":"exact"},{"name":"extrinsic to autophagic vacuole membrane","type":"exact"}],"termid":"GO:0097635"}


id: GO:0150011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which the anatomical structures of a neuron projection are generated and organized into branches.","definition_xrefs":["GOC:bc","PMID:17114044","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"regulates","term_name":"neuron projection arborization","termid":"GO:0140058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron projection arborization","synonyms":[{"name":"regulation of neurite arborization","type":"exact"},{"name":"regulation of neurite branching","type":"exact"},{"name":"regulation of neuron projection branching","type":"exact"}],"termid":"GO:0150011"}


id: PBO:0055501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2935","termid":"PBO:0055501"}


id: PBO:0064980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 36, pseudogene","termid":"PBO:0064980"}


id: PBO:0067794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 96","termid":"PBO:0067794"}


id: GO:0030957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Tat, a viral transactivating regulatory protein from the human immunodeficiency virus, or the equivalent protein from another virus.","definition_xrefs":["GOC:mah","PMID:9094689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"Tat protein binding","termid":"GO:0030957"}


id: PBO:0070677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 48","termid":"PBO:0070677"}


id: PBO:0061974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AM member 1 pseudogene","termid":"PBO:0061974"}


id: PBO:0001099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C5HC2 type","termid":"PBO:0001099"}


id: MONDO:0005925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bovine respiratory disease found in animals that have been shipped or exposed to cattle recently transported. The major agent responsible for the disease is mannheimia haemolytica and less commonly, pasteurella multocida or haemophilus somnus. All three agents are normal inhabitants of the bovine nasal pharyngeal mucosa but not the lung. They are considered opportunistic pathogens following stress, physiological and/or a viral infection. The resulting bacterial fibrinous bronchopneumonia is often fatal.","definition_xrefs":["MESH:D012766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonic pasteurellosis","secondary_identifiers":["MEDGEN:11408","EFO:0007449","UMLS:C0036969"],"termid":"MONDO:0005925","xrefs":{"Monarch":{"xref_id":"0005925"}}}


id: PBO:0047317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 1 pseudogene 1","termid":"PBO:0047317"}


id: PR:Q9P7Z9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hap2 gene.","definition_xrefs":["UniProtKB:Q9P7Z9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.20c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.20c","synonyms":[{"name":"Spom972h-hap2","type":"exact"}],"termid":"PR:Q9P7Z9"}


id: PBO:0052640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 8","termid":"PBO:0052640"}


id: PBO:0005832
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.13","termid":"PBO:0005832"}


id: GO:0047081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + NADPH + H+ + 3-hydroxy-2-methylpyridine-5-carboxylate = NADP+ + 2-(acetamidomethylene)succinate.","definition_xrefs":["EC:1.14.13.242","MetaCyc:1.14.12.4-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-hydroxy-2-methylpyridinecarboxylate dioxygenase activity","secondary_identifiers":["RHEA:10864"],"synonyms":[{"name":"2-methyl-3-hydroxypyridine 5-carboxylic acid dioxygenase activity","type":"related"},{"name":"3-hydroxy-2-methylpyridine-5-carboxylate,NADPH:oxygen oxidoreductase (decyclizing)","type":"related"},{"name":"3-hydroxy-3-methylpyridinecarboxylate dioxygenase activity","type":"related"},{"name":"methylhydroxypyridine carboxylate dioxygenase activity","type":"related"},{"name":"methylhydroxypyridinecarboxylate oxidase activity","type":"related"}],"termid":"GO:0047081"}


id: MONDO:0957337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated chorioretinal dystrophy","secondary_identifiers":["GARD:22096","Orphanet:519300","UMLS:C5681368","MEDGEN:1842795"],"termid":"MONDO:0957337","xrefs":{"Monarch":{"xref_id":"0957337"}}}


id: FYPO:0001407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing glucose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002060","FYPO:0002057","FYPO:0000003","FYPO:0005447","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on glucose carbon source","secondary_identifiers":["FYPO:0001161","FYPO:0001163"],"synonyms":[{"name":"decreased aerobic cell population growth on glucose carbon source","type":"narrow"},{"name":"decreased growth on glucose carbon source","type":"broad"},{"name":"decreased hypoxic cell population growth on glucose carbon source","type":"narrow"},{"name":"decreased vegetative cell growth on glucose carbon source","type":"exact"},{"name":"reduced cell growth on glucose carbon source","type":"exact"},{"name":"slow cell growth on glucose carbon source","type":"narrow"}],"termid":"FYPO:0001407"}


id: MONDO:0024229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A miliaria that is characterized by clear, superficial, noninflammed, subcorneal vesicles that easily rupture when rubbed and is located in the stratum corneum.","definition_xrefs":["DOID:0070321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria crystallina","secondary_identifiers":["icd11.foundation:796835029","UMLS:C3241961","MEDGEN:757640"],"termid":"MONDO:0024229","xrefs":{"Monarch":{"xref_id":"0024229"}}}


id: PBO:0083921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formylglycinamidine-ribonucleotide (FGAM)-synthetase; catalyzes a step in the 'de novo' purine nucleotide biosynthetic pathway","termid":"PBO:0083921"}


id: PBO:0087360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spore-specific water channel; mediates the transport of water across cell membranes, developmentally controlled; may play a role in spore maturation, probably by allowing water outflow, may be involved in freeze tolerance","termid":"PBO:0087360"}


id: PBO:0005309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Dim1","termid":"PBO:0005309"}


id: PBO:0049880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase family member 1","termid":"PBO:0049880"}


id: PBO:0068354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 135","termid":"PBO:0068354"}


id: MONDO:0014022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy-dystroglycanopathy, type A in which the cause of the disease is a mutation in the RXYLT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 10","secondary_identifiers":["GARD:15898","OMIM:615041","MEDGEN:767295","UMLS:C3554381","DOID:0111239"],"synonyms":[{"name":"MDDGA10","type":"related"},{"name":"RXYLT1 muscular dystrophy-dystroglycanopathy, type A","type":"exact"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, Tmem5-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 10","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 10","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy, type A caused by mutation in RXYLT1","type":"exact"}],"termid":"MONDO:0014022","xrefs":{"Monarch":{"xref_id":"0014022"}}}


id: PR:O14302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cyk3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokinesis protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.06c","synonyms":[{"name":"Spom972h-cyk3","type":"exact"}],"termid":"PR:O14302"}


id: MONDO:0006669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endocarditis that is caused by an infection with a bacterial agent.","definition_xrefs":["NCIT:C128359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infective endocarditis","termid":"MONDO:0000565"},{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"bacterial endocarditis","secondary_identifiers":["EFO:1000830","UMLS:C0014121","HP:0006689","MedDRA:10004019","MESH:D004697","SCTID:301183007","icd11.foundation:1924438986","MEDGEN:41779"],"synonyms":[{"name":"Bacteria caused endocarditis (disease)","type":"exact"},{"name":"Bacteria endocarditis (disease)","type":"exact"},{"name":"bacterial endocarditis","type":"exact"},{"name":"bacterial endocarditis (disease)","type":"exact"}],"termid":"MONDO:0006669","xrefs":{"Monarch":{"xref_id":"0006669"}}}


id: GO:1901983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein acetylation.","definition_xrefs":["GOC:TermGenie","PMID:22117195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein acetylation","synonyms":[{"name":"regulation of protein amino acid acetylation","type":"exact"}],"termid":"GO:1901983"}


id: PR:000027702
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- klp9 gene or a 1:1 ortholog thereof.","definition_xrefs":["PomBase:SPBC15D4.01c","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like motor protein klp9/SPBC15D4.01c","synonyms":[{"name":"klp9","type":"exact"}],"termid":"PR:000027702"}


id: GO:0015225
data:
  {"annotated_genes":["SJAG_02780","SJAG_02779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71602,79083],"is_not":false,"summary":null,"term":"GO:0015225"}]},"cv_name":"molecular_function","definition":"Enables the transfer of biotin from one side of a membrane to the other. Biotin is cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid; the (+) enantiomer is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02779":null,"SJAG_02780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"biotin transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:TRANS-RXN0-240","GO:1901603"],"synonyms":[{"name":"biotin transporter activity","type":"related"},{"name":"vitamin B7 transporter activity","type":"related"},{"name":"vitamin H transporter activity","type":"related"}],"termid":"GO:0015225","terms_by_termid":{"GO:0015225":null}}


id: PBO:0079504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 2","termid":"PBO:0079504"}


id: MOD:00752
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with ADP-ribose through formation of a glycosidic bond.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","synonyms":[{"name":"ADP-rybosylation (from NAD)","type":"exact"},{"name":"ADPRibRes","type":"exact"}],"termid":"MOD:00752"}


id: PR:O59792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cif1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin-independence factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.01","synonyms":[{"name":"Spom972h-cif1","type":"exact"}],"termid":"PR:O59792"}


id: MONDO:0018134
data:
  {"annotated_genes":["SJAG_02453","SJAG_00108","SJAG_03960","SJAG_00938","SJAG_00115","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86824,86825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008962"},{"annotations":[85920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014885"},{"annotations":[85780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[86873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011683"},{"annotations":[84944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014070"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00115":null,"SJAG_00938":null,"SJAG_02453":null,"SJAG_03011":null,"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of melanin metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:352728","GARD:21528","MEDGEN:1842889","UMLS:C5680988"],"termid":"MONDO:0018134","terms_by_termid":{"MONDO:0008962":null,"MONDO:0011683":null,"MONDO:0011997":null,"MONDO:0014070":null,"MONDO:0014885":null},"xrefs":{"Monarch":{"xref_id":"0018134"}}}


id: GO:0120251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a hydrocarbon, a compound consisting of carbon and hydrogen only.","definition_xrefs":["GOC:krc","Wikipedia:Hydrocarbon"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrocarbon biosynthetic process","synonyms":[{"name":"hydrocarbon anabolism","type":"exact"},{"name":"hydrocarbon biosynthesis","type":"exact"},{"name":"hydrocarbon formation","type":"exact"},{"name":"hydrocarbon synthesis","type":"exact"}],"termid":"GO:0120251"}


id: PBO:0090142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-type precatalytic spliceosome WW domain-binding protein Wbp4","termid":"PBO:0090142"}


id: SO:0001629
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the first two or last two bases of an intron, or the 5th base from the start of the intron in the orientation of the transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"},{"relation_name":"is_a","term_name":"intron_variant","termid":"SO:0001627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_site_variant","secondary_identifiers":["http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"VAT:spliceOverlap","type":"exact"},{"name":"essential_splice_site","type":"exact"},{"name":"splice site variant","type":"exact"}],"termid":"SO:0001629"}


id: PBO:0031241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_localization","termid":"PBO:0031241"}


id: GO:0016571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of methyl groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone methylation (obsolete GO:0016571)","secondary_identifiers":["Wikipedia:Histone_methylation"],"termid":"GO:0016571"}


id: GO:0050917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive an umami taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of umami taste","synonyms":[{"name":"umami taste perception","type":"exact"}],"termid":"GO:0050917"}


id: MONDO:0004945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypereosinophilic syndrome (obsolete MONDO:0004945)","termid":"MONDO:0004945","xrefs":{"Monarch":{"xref_id":"0004945"}}}


id: SO:0002154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genomic region where there is an exchange of genetic material with another genomic region, occurring in somatic cells.","definition_xrefs":["SO:ke","NCBI:cf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic_recombination_region","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:mitotic","type":"exact"},{"name":"INSDC_qualifier:mitotic_recombination","type":"exact"},{"name":"mitotic recombination region","type":"exact"}],"termid":"SO:0002154"}


id: PBO:0091001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 regulatory subunit","termid":"PBO:0091001"}


id: PBO:0082144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of Sar1p GTPase activity; paralog of Sec23 but does not associate with the COPII components; not an essential gene","termid":"PBO:0082144"}


id: GO:0060785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptosis that results in the maintenance of the steady-state number of cells within a tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"part_of","term_name":"homeostasis of number of cells within a tissue","termid":"GO:0048873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptosis involved in tissue homeostasis","termid":"GO:0060785"}


id: PBO:0043433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNIH3 antisense RNA 2","termid":"PBO:0043433"}


id: GO:2000219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of invasive growth in response to glucose limitation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070786"},{"relation_name":"is_a","term_name":"regulation of invasive growth in response to glucose limitation","termid":"GO:2000217"},{"relation_name":"positively_regulates","term_name":"invasive growth in response to glucose limitation","termid":"GO:0001403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of invasive growth in response to glucose limitation","synonyms":[{"name":"positive regulation of colony morphology","type":"related"}],"termid":"GO:2000219"}


id: GO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH.","definition_xrefs":["PMID:10512869"],"gene_count":0,"genotype_count":0,"name":"obsolete peripheral to membrane of membrane fraction (obsolete GO:0000300)","synonyms":[{"name":"peripheral to membrane of membrane fraction","type":"exact"}],"termid":"GO:0000300"}


id: MONDO:0000716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired writing disorder causing a loss in the ability to communicate through writing, either due to some motor dysfunction or the inability to spell.","definition_xrefs":["PMID:21507544","DOID:0060223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"writing disorder","termid":"MONDO:0000599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agraphia","secondary_identifiers":["MEDGEN:1790","UMLS:C0001825","icd11.foundation:1372096058","MESH:D000381"],"termid":"MONDO:0000716","xrefs":{"Monarch":{"xref_id":"0000716"}}}


id: GO:0036340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of hardening a chitin-based cuticle by mineral incorporation. For example, the cuticle of crustaceans is hardened by the incorporation of calcium carbonate.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin-based cuticle sclerotization","termid":"GO:0007593"},{"relation_name":"is_a","term_name":"biomineral tissue development","termid":"GO:0031214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle sclerotization by biomineralization","synonyms":[{"name":"chitin-based cuticle hardening by biomineralisation","type":"exact"}],"termid":"GO:0036340"}


id: CHEBI:26981
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threitol","termid":"CHEBI:26981"}


id: PBO:0055009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2424","termid":"PBO:0055009"}


id: PBO:0043683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fate and sterol metabolism associated divergent transcript of MOCOS","termid":"PBO:0043683"}


id: PBO:0001059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor beta subunit Srp102 (predicted)","termid":"PBO:0001059"}


id: MONDO:0000379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant form of Sertoli-leydig cell tumor.","definition_xrefs":["MONDO:patterns/malignant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sertoli-Leydig cell tumor","termid":"MONDO:0002479"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant Sertoli-Leydig cell tumor","secondary_identifiers":["DOID:0050618"],"synonyms":[{"name":"Sertoli-Leydig cell tumor, malignant","type":"exact"}],"termid":"MONDO:0000379","xrefs":{"Monarch":{"xref_id":"0000379"}}}


id: MONDO:0002579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that arises from the orbit. It is characterized by the presence of skeletal muscle tissue exhibiting embryonic features.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orbit rhabdomyosarcoma","termid":"MONDO:0002580"},{"relation_name":"is_a","term_name":"embryonal rhabdomyosarcoma","termid":"MONDO:0009993"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"orbit embryonal rhabdomyosarcoma","secondary_identifiers":["NCIT:C6246","DOID:3258","UMLS:C1335127","MEDGEN:233267"],"synonyms":[{"name":"embryonal rhabdomyosarcoma of orbit","type":"exact"},{"name":"embryonal rhabdomyosarcoma of the orbit","type":"exact"}],"termid":"MONDO:0002579","xrefs":{"Monarch":{"xref_id":"0002579"}}}


id: GO:0102798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: heptanal + O2 + H2O = H+ + heptanoate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete heptaldehyde:oxygen oxidoreductase activity (obsolete GO:0102798)","termid":"GO:0102798"}


id: PBO:0064826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 7","termid":"PBO:0064826"}


id: PBO:0079001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 1-1","termid":"PBO:0079001"}


id: GO:1903533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein targeting.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"regulates","term_name":"protein targeting","termid":"GO:0006605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"regulation of protein targeting","synonyms":[{"name":"regulation of nascent polypeptide association","type":"related"},{"name":"regulation of protein sorting along secretory pathway","type":"narrow"}],"termid":"GO:1903533"}


id: PR:Q9UT16
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase mitochondrial F1 complex assembly factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00598","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein atp12, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.12c","secondary_identifiers":["UniProtKB:Q9UT16"],"synonyms":[{"name":"Spom972h-ATPAF2","type":"exact"}],"termid":"PR:Q9UT16"}


id: PBO:0027982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_import_into_nucleus","termid":"PBO:0027982"}


id: GO:0032085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a type II restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:mah","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of type II site-specific deoxyribonuclease activity (obsolete GO:0032085)","synonyms":[{"name":"regulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type II restriction endodeoxyribonuclease regulator","type":"related"},{"name":"type II restriction enzyme regulator","type":"related"}],"termid":"GO:0032085"}


id: GO:0009703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + NAD+ + H2O = nitrate + NADH + H+.","definition_xrefs":["RHEA:17913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase [NAD(P)H] activity","termid":"GO:0050463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitrate reductase (NADH) activity","secondary_identifiers":["MetaCyc:NITRATE-REDUCTASE-NADH-RXN","EC:1.7.1.1"],"synonyms":[{"name":"NADH-dependent nitrate reductase activity","type":"related"},{"name":"NADH-nitrate reductase activity","type":"related"},{"name":"NADH:nitrate oxidoreductase activity","type":"related"},{"name":"NADH:nitrate reductase activity","type":"exact"},{"name":"assimilatory NADH: nitrate reductase activity","type":"related"},{"name":"assimilatory NADH:nitrate reductase activity","type":"related"},{"name":"assimilatory nitrate reductase activity","type":"broad"},{"name":"nitrate reductase (NADH(2)) activity","type":"related"},{"name":"nitrate reductase (NADH2)","type":"related"},{"name":"nitrite:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0009703"}


id: GO:0034403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Recognition of both the 5' and 3'-splice sites and positioning them in the correct alignment with respect to each other so that the second catalytic step of nuclear mRNA splicing can occur.","definition_xrefs":["PMID:9430647","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA 3'-splice site recognition","termid":"GO:0000389"},{"relation_name":"is_a","term_name":"mRNA 5'-splice site recognition","termid":"GO:0000395"},{"relation_name":"part_of","term_name":"generation of catalytic spliceosome for second transesterification step","termid":"GO:0000350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"alignment of 3' and 5' splice sites of mRNA","synonyms":[{"name":"alignment of 3' and 5' splice sites of nuclear mRNA","type":"exact"}],"termid":"GO:0034403"}


id: MONDO:0018468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Proton-pump inhibitor-responsive esophageal eosinophilia (PPI-REE) is a rare, gastroenterologic disease characterized by typical clinical, endoscopic and histological features of eosinophilic oesophagitis (i.e. symptomatic oesophageal dysfunction associated with eosinophil-predominant mucose infiltrate) which completely remits upon proton pump inhibitor therapy.","definition_xrefs":["Orphanet:411696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eosinophilic gastrointestinal disease","termid":"MONDO:0018438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"proton-pump inhibitor-responsive esophageal eosinophilia","secondary_identifiers":["GARD:21735","MEDGEN:1669432","UMLS:C4749332"],"synonyms":[{"name":"PPI-REE","type":"exact"},{"name":"PPI-responsive esophageal eosinophilia","type":"exact"},{"name":"PPIRee","type":"exact"}],"termid":"MONDO:0018468","xrefs":{"Monarch":{"xref_id":"0018468"}}}


id: MOD:01928
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks either an L-asparagine residue or an L-aspartic acid residue with a glycine residue by an isopeptide bond with formation of N-(L-isoaspartyl)glycine.","definition_xrefs":["ChEBI:21479","RESID:AA0126","PubMed:1826288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(L-isoaspartyl)-glycine","synonyms":[{"name":"(2S)-2-amino-4-(carboxymethyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-N4-(carboxymethyl)-butanediamic acid","type":"exact"},{"name":"N-(L-isoaspartyl)-glycine","type":"exact"},{"name":"N-beta-aspartylglycine","type":"exact"},{"name":"N4-(carboxymethyl)-asparagine","type":"exact"},{"name":"XLNK-4Asp-NGly","type":"exact"},{"name":"isoaspartyl glycine","type":"exact"}],"termid":"MOD:01928"}


id: PBO:0091476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Mvp1","termid":"PBO:0091476"}


id: SO:0000461
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal deletion whereby a chromosome generated by recombination between two inversions; has a deficiency at each end of the inversion.","definition_xrefs":["FB:km"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_deletion","termid":"SO:1000029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_derived_bipartite_deficiency","synonyms":[{"name":"inversion derived bipartite deficiency","type":"exact"}],"termid":"SO:0000461"}


id: PBO:0043832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 4","termid":"PBO:0043832"}


id: PBO:0077215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated 7 homolog","termid":"PBO:0077215"}


id: GO:0004824
data:
  {"annotated_genes":["SJAG_00488","SJAG_04409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71567,73313],"is_not":false,"summary":null,"term":"GO:0004824"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-lysine + tRNA(Lys) = AMP + diphosphate + L-lysyl-tRNA(Lys).","definition_xrefs":["EC:6.1.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00488":null,"SJAG_04409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"lysine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:LYSINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380008","Reactome:R-HSA-380233","RHEA:20792"],"synonyms":[{"name":"L-lysine-transfer RNA ligase activity","type":"related"},{"name":"L-lysine:tRNALys ligase (AMP-forming)","type":"related"},{"name":"lysine translase activity","type":"related"},{"name":"lysine-tRNA synthetase activity","type":"related"},{"name":"lysyl-tRNA synthetase activity","type":"exact"},{"name":"lysyl-transfer RNA synthetase activity","type":"related"},{"name":"lysyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004824","terms_by_termid":{"GO:0004824":null}}


id: GO:0038111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-7 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-7","termid":"GO:0098761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-7-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-1266695"],"synonyms":[{"name":"IL-7-mediated signaling pathway","type":"exact"},{"name":"interleukin-7-mediated signalling pathway","type":"exact"}],"termid":"GO:0038111"}


id: GO:0070223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sulfide oxidation process that proceeds via the reaction catalyzed by sulfur dioxygenase.","definition_xrefs":["MetaCyc:PWY-5285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfide oxidation","termid":"GO:0019418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfide oxidation, using sulfur dioxygenase","synonyms":[{"name":"sulphide oxidation, using sulfur dioxygenase","type":"exact"}],"termid":"GO:0070223"}


id: MONDO:0009007
data:
  {"annotated_genes":["SJAG_04111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85135],"is_not":false,"summary":null,"term":"MONDO:0009007"}]},"cv_name":"mondo","definition":"Jalili syndrome is characterized by the association of amelogenesis imperfecta (AI) and cone-rod retinal dystrophy (CORD).","definition_xrefs":["Orphanet:1873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04111":null},"genotype_count":0,"is_obsolete":false,"name":"Jalili syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:217080","GARD:1463","SCTID:707608003","MESH:C000596385","ICD10CM:H35.5","ICD9:362.75","MEDGEN:501210","DOID:0111404","ICD9:520.5","UMLS:C3495589"],"synonyms":[{"name":"Jalili syndrome","type":"exact"},{"name":"cone rod dystrophy-amelogenesis imperfecta syndrome","type":"exact"},{"name":"cone-rod dystrophy amelogenesis imperfecta","type":"related"},{"name":"cone-rod dystrophy and amelogenesis imperfecta","type":"related"},{"name":"cone-rod dystrophy with amelogenesis imperfecta","type":"related"}],"termid":"MONDO:0009007","terms_by_termid":{"MONDO:0009007":null},"xrefs":{"Monarch":{"xref_id":"0009007"}}}


id: PBO:0066245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 2","termid":"PBO:0066245"}


id: GO:0090230
data:
  {"annotated_genes":["SJAG_01837","SJAG_04638","SJAG_03048","SJAG_00718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[89437,102171,116466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of centromere complex assembly, the aggregation, arrangement and bonding together of proteins and centromeric DNA molecules to form a centromeric protein-DNA complex.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"centromere complex assembly","termid":"GO:0034508"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of centromere complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere licensing","type":"related"}],"termid":"GO:0090230","terms_by_termid":{"GO:1905560":null,"GO:1905561":null}}


id: GO:0038077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation and activation of a MAP kinase kinase (MAPKK), as part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase kinase activity involved in innate immune response (obsolete GO:0038077)","synonyms":[{"name":"MAP3K activity involved in innate immune response","type":"exact"},{"name":"MAPKKK activity involved in innate immune response","type":"exact"}],"termid":"GO:0038077"}


id: GO:0051655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a vesicle is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of vesicle location","synonyms":[{"name":"maintenance of vesicle localization","type":"related"}],"termid":"GO:0051655"}


id: PATO:0000980
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000980 absolute porosity value (obsolete PATO:0000980)","termid":"PATO:0000980"}


id: PBO:0035944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K56_acetylation_in_transcribed_regions_during_vegetative_growth","termid":"PBO:0035944"}


id: PBO:0002738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid family protease","termid":"PBO:0002738"}


id: PBO:0055110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2529","termid":"PBO:0055110"}


id: GO:0071548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dexamethasone stimulus.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dexamethasone","synonyms":[{"name":"response to dexamethasone stimulus","type":"exact"}],"termid":"GO:0071548"}


id: PBO:0044005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein alpha s1","termid":"PBO:0044005"}


id: PBO:0087209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; seven-beta-strand lysine methyltransferase which dimethylates translation elongation factor EF2 (Eft1p and Eft2p) at lysine 613 and methylates EF3 (Yef3p) at lysine 187; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; involved in regulation of translational termination; predicted involvement in ribosome biogenesis","termid":"PBO:0087209"}


id: PBO:0064070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 104","termid":"PBO:0064070"}


id: PBO:0066483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 1","termid":"PBO:0066483"}


id: PBO:0064257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A5","termid":"PBO:0064257"}


id: MONDO:0700277
data:
  {"annotated_genes":["SJAG_00637"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030677"},{"annotations":[85326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013722"}]},"cv_name":"mondo","definition":"Disorder in which the cause of disease is a variation in the POLR3B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00637":null},"genotype_count":0,"is_obsolete":false,"name":"POLR3B-related disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700277","terms_by_termid":{"MONDO:0013722":null,"MONDO:0030677":null},"xrefs":{"Monarch":{"xref_id":"0700277"}}}


id: PBO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic spindle pole body protein Kms1","termid":"PBO:0002063"}


id: PBO:0045247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C27","termid":"PBO:0045247"}


id: PBO:0069369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 629, pseudogene","termid":"PBO:0069369"}


id: SO:0002360
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for cytosolic rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA_gene","termid":"SO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_gene","termid":"SO:0002360"}


id: PBO:0030500
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_DNA_damage_checkpoint","termid":"PBO:0030500"}


id: GO:0070345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of fat cell proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of fat cell proliferation","termid":"GO:0070344"},{"relation_name":"negatively_regulates","term_name":"fat cell proliferation","termid":"GO:0070341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fat cell proliferation","synonyms":[{"name":"down regulation of fat cell proliferation","type":"exact"},{"name":"down-regulation of fat cell proliferation","type":"exact"},{"name":"downregulation of fat cell proliferation","type":"exact"},{"name":"inhibition of fat cell proliferation","type":"narrow"},{"name":"negative regulation of adipocyte proliferation","type":"exact"},{"name":"negative regulation of adipose cell proliferation","type":"exact"}],"termid":"GO:0070345"}


id: PBO:0044345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 29","termid":"PBO:0044345"}


id: GO:0034040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + lipid(in) = ADP + phosphate + lipid(out).","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled lipid transmembrane transporter activity","synonyms":[{"name":"ATP-dependent lipid transmembrane transporter activity","type":"exact"},{"name":"lipid-transporting ATPase activity","type":"broad"}],"termid":"GO:0034040"}


id: PBO:0042662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 18","termid":"PBO:0042662"}


id: GO:0043476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of coloring matter in a particular location in an organism, tissue or cell, occurring in response to some external stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment accumulation","synonyms":[{"name":"pigment accumulation in response to external stimulus","type":"exact"}],"termid":"GO:0043476"}


id: MONDO:0006734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm arising from the wall of the duodenum.","definition_xrefs":["NCIT:C4775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of duodenum","termid":"MONDO:0021375"},{"relation_name":"is_a","term_name":"benign neoplasm of small intestine","termid":"MONDO:0021501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign duodenal neoplasm","secondary_identifiers":["MESH:D004379","UMLS:C0496869","MONDO:0021504","DOID:1737","MedDRA:10004251","MEDGEN:96924","SCTID:92080005","EFO:1000907"],"synonyms":[{"name":"benign duodenal neoplasm","type":"exact"},{"name":"benign duodenal tumor","type":"exact"},{"name":"benign duodenal tumour","type":"exact"},{"name":"benign neoplasm of duodenum","type":"exact"},{"name":"benign neoplasm of the duodenum","type":"exact"},{"name":"benign tumor of duodenum","type":"exact"},{"name":"benign tumor of the duodenum","type":"exact"},{"name":"benign tumour of duodenum","type":"exact"},{"name":"benign tumour of the duodenum","type":"exact"},{"name":"duodenal benign neoplasm","type":"related"},{"name":"duodenum benign neoplasm","type":"exact"},{"name":"neoplasm of the duodenum","type":"broad"}],"termid":"MONDO:0006734","xrefs":{"Monarch":{"xref_id":"0006734"}}}


id: GO:0050047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-leucine = (3R)-beta-leucine.","definition_xrefs":["RHEA:10284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"L-leucine 2,3-aminomutase activity","secondary_identifiers":["KEGG_REACTION:R01091","MetaCyc:LEUCINE-23-AMINOMUTASE-RXN","EC:5.4.3.7"],"synonyms":[{"name":"(2S)-alpha-leucine 2,3-aminomutase activity","type":"related"},{"name":"leucine 2,3-aminomutase activity","type":"related"}],"termid":"GO:0050047"}


id: PBO:0084647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule polymerase of the XMAP215/Dis1 family; required for elongation of mitotic spindle during anaphase, as well as for spindle orientation and metaphase chromosome alignment; stabilizes or destabilizes kinetochore-microtubule attachment depending on kinetochore tension; interacts with spindle pole body component Spc72p; metazoan ch-TOG/XMAP215 family member","termid":"PBO:0084647"}


id: GO:0008559
data:
  {"annotated_genes":["SJAG_05213","SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95864,117750],"is_not":false,"summary":null,"term":"GO:0008559"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + xenobiotic(in) = ADP + phosphate + xenobiotic(out).","definition_xrefs":["EC:7.6.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03363":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type xenobiotic transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.6.3.44-RXN","GO:0005226","Reactome:R-HSA-9757139","GO:0008560"],"synonyms":[{"name":"ATP phosphohydrolase (xenobiotic-exporting)","type":"related"},{"name":"ATP-dependent xenobiotic transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled xenobiotic transmembrane transporter activity","type":"related"},{"name":"MDR protein","type":"related"},{"name":"P-glycoprotein","type":"related"},{"name":"PDR protein","type":"related"},{"name":"multidrug resistance exporter","type":"related"},{"name":"multidrug-resistance protein","type":"related"},{"name":"pleiotropic-drug-resistance protein","type":"related"},{"name":"xenobiotic ABC transporter","type":"narrow"},{"name":"xenobiotic transmembrane transporting ATPase activity","type":"exact"}],"termid":"GO:0008559","terms_by_termid":{"GO:0008559":null}}


id: PR:Q1K9C2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sir1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1K9C2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase [NADPH] subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.01c","synonyms":[{"name":"Spom972h-sir1","type":"exact"}],"termid":"PR:Q1K9C2"}


id: GO:1902323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methyl-branched fatty acid biosynthetic process.","definition_xrefs":["PMID:15340492","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"is_a","term_name":"regulation of methyl-branched fatty acid biosynthetic process","termid":"GO:1902322"},{"relation_name":"negatively_regulates","term_name":"methyl-branched fatty acid biosynthetic process","termid":"GO:1902321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of methyl-branched fatty acid biosynthetic process","synonyms":[{"name":"down regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"down regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"down regulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"down regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"down regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"downregulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"downregulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"downregulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"downregulation of methyl-branched fatty acid formation","type":"exact"},{"name":"downregulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"inhibition of methyl-branched fatty acid anabolism","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid biosynthesis","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid biosynthetic process","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid formation","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid synthesis","type":"narrow"},{"name":"negative regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"negative regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"negative regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"negative regulation of methyl-branched fatty acid synthesis","type":"exact"}],"termid":"GO:1902323"}


id: PBO:0064286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing S1","termid":"PBO:0064286"}


id: MONDO:0007822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete incisors, long upper central (obsolete MONDO:0007822)","secondary_identifiers":["OMIM:147300"],"synonyms":[{"name":"incisors, long upper central","type":"exact"}],"termid":"MONDO:0007822","xrefs":{"Monarch":{"xref_id":"0007822"}}}


id: PBO:0049262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gasdermin A","termid":"PBO:0049262"}


id: GO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature natural killer T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["PMID:15771592","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell activation involved in immune response","termid":"GO:0002287"},{"relation_name":"is_a","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell activation involved in immune response","synonyms":[{"name":"NK T cell activation during immune response","type":"related"},{"name":"NK T lymphocyte activation during immune response","type":"related"},{"name":"NK T-cell activation during immune response","type":"related"},{"name":"NK T-lymphocyte activation during immune response","type":"related"},{"name":"natural killer T lymphocyte activation during immune response","type":"related"},{"name":"natural killer T-cell activation during immune response","type":"related"},{"name":"natural killer T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002288"}


id: MONDO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete renal hypodysplasia/aplasia (obsolete MONDO:0000191)","termid":"MONDO:0000191","xrefs":{"Monarch":{"xref_id":"0000191"}}}


id: GO:0090114
data:
  {"annotated_genes":["SJAG_02349","SJAG_03558","SJAG_03907","SJAG_05344","SJAG_05345","SJAG_03153","SJAG_02539","SJAG_00072"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72857],"is_not":false,"summary":null,"term":"GO:0090114"},{"annotations":[74596,74950,71208,75361,76323,78197,76860],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090110"}]},"cv_name":"biological_process","definition":"The evagination of an endoplasmic reticulum membrane, resulting in formation of a COPII-coated vesicle.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle budding from membrane","termid":"GO:0006900"},{"relation_name":"part_of","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"COPII-coated vesicle budding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"COPII vesicle budding","type":"related"},{"name":"ER exit","type":"narrow"},{"name":"ER vesicle budding","type":"broad"}],"termid":"GO:0090114","terms_by_termid":{"GO:0090110":null,"GO:0090114":null}}


id: SO:1000079
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000079 sequence_variation_affecting_transcript_sequence (obsolete SO:1000079)","synonyms":[{"name":"mutation affecting transcript sequence","type":"exact"},{"name":"sequence variation affecting transcript sequence","type":"exact"}],"termid":"SO:1000079"}


id: MONDO:0006637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute renal failure caused by the cell death of the renal tubules. Causes include nephrotoxins, cytotoxic drugs, and antibiotics.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute kidney failure","termid":"MONDO:0002492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"acute kidney tubular necrosis","secondary_identifiers":["SCTID:35455006","UMLS:C0022672","MESH:D007683","HP:0008682","MedDRA:10023441","DOID:12556","MEDGEN:7213","SCTID:23697004","NCIT:C34749","EFO:1000794","ICD9:584.5"],"synonyms":[{"name":"ATN - acute tubular necrosis","type":"exact"},{"name":"acute renal failure with lesion of tubular necrosis","type":"exact"},{"name":"acute renal failure with tubular necrosis","type":"exact"},{"name":"acute tubular necrosis","type":"exact"},{"name":"acute tubule necrosis","type":"exact"}],"termid":"MONDO:0006637","xrefs":{"Monarch":{"xref_id":"0006637"}}}


id: PBO:0055667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 3","termid":"PBO:0055667"}


id: PBO:0030339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_oxidative_stress","termid":"PBO:0030339"}


id: GO:0035457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-alpha stimulus. Interferon-alpha is a type I interferon.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interferon-alpha","termid":"GO:0035455"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interferon-alpha","synonyms":[{"name":"cellular response to interferon alfa-n1","type":"related"},{"name":"cellular response to interferon alfa-n3","type":"related"},{"name":"cellular response to leukocyte interferon","type":"exact"},{"name":"cellular response to lymphoblast interferon","type":"exact"},{"name":"cellular response to lymphoblastoid interferon","type":"exact"}],"termid":"GO:0035457"}


id: GO:0023042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which information is sent from one location to another, within a living organism or between living organisms, via a protein/peptide mediator.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signaling via protein/peptide mediator (obsolete GO:0023042)","synonyms":[{"name":"signaling via protein/peptide mediator","type":"exact"},{"name":"signalling via protein/peptide mediator","type":"exact"}],"termid":"GO:0023042"}


id: PBO:0053741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 967","termid":"PBO:0053741"}


id: PBO:0029693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_iron_level","termid":"PBO:0029693"}


id: PR:O13752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane protein 56 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized TLC domain-containing protein C17A2.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.02c","secondary_identifiers":["UniProtKB:O13752"],"synonyms":[{"name":"Spom972h-TMEM56","type":"exact"}],"termid":"PR:O13752"}


id: PBO:0083673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum zinc transporter; part of a heterodimeric transporter with Zrg17p that transfers zinc from the cytosol to the ER lumen; member of the cation diffusion facilitator family of efflux pumps; localizes to ER and nucleus; mutations affect the cellular distribution of zinc and also confer defects in meiotic recombination between homologous chromatids","termid":"PBO:0083673"}


id: PBO:0031716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_genome_maintenance","termid":"PBO:0031716"}


id: PBO:0079367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 1","termid":"PBO:0079367"}


id: MONDO:0004300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intracortical osteogenic sarcoma (obsolete MONDO:0004300)","termid":"MONDO:0004300","xrefs":{"Monarch":{"xref_id":"0004300"}}}


id: GO:0021957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a pyramidal cell, that carries efferent (outgoing) action potentials from the cell body in cerebral cortex layer V towards target cells in the gray matter of the spinal cord. This axonal process is a member of those that make up the corticospinal tract.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021","PMID:9878731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal tract morphogenesis","synonyms":[{"name":"CST axonogenesis","type":"exact"},{"name":"corticospinal tract axonogenesis","type":"exact"}],"termid":"GO:0021957"}


id: GO:0060592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process pertaining to the initial formation of the mammary gland from unspecified parts. The process begins with formation of the mammary line and ends when the solid mammary bud invades the primary mammary mesenchyme.","definition_xrefs":["GOC:dph","PMID:16168142","PMID:17120154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"mammary gland morphogenesis","termid":"GO:0060443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland formation","synonyms":[{"name":"mammary bud formation","type":"related"},{"name":"mammary line formation","type":"narrow"},{"name":"mammary placode formation","type":"narrow"},{"name":"mammary sprout formation","type":"related"}],"termid":"GO:0060592"}


id: GO:0120309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the lateral attachment of the cilium to the cell body via the flagellar attachment zone in some trypanosomatid species.","definition_xrefs":["PMID:26272611","GOC:ach","GOC:krc","PMID:11877446","PMID:18820079","PMID:22623724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"cilium organization","termid":"GO:0044782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium attachment to cell body","synonyms":[{"name":"cilial attachment to cell body","type":"exact"},{"name":"ciliary attachment to cell body","type":"exact"},{"name":"flagellar attachment to cell body","type":"exact"},{"name":"flagellum attachment to cell body","type":"exact"}],"termid":"GO:0120309"}


id: MONDO:0018790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete COL4A1 or COL4A2-related cerebral small vessel disease with hemorrhagic tendency (obsolete MONDO:0018790)","secondary_identifiers":["Orphanet:477765"],"synonyms":[{"name":"COL4A1 or COL4A2-related cerebral angiopathy with hemorrhagic tendency","type":"exact"}],"termid":"MONDO:0018790","xrefs":{"Monarch":{"xref_id":"0018790"}}}


id: MONDO:0000075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuronopathy, distal hereditary motor (obsolete MONDO:0000075)","termid":"MONDO:0000075","xrefs":{"Monarch":{"xref_id":"0000075"}}}


id: GO:0086043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a bundle of His cell.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"},{"relation_name":"part_of","term_name":"bundle of His cell to Purkinje myocyte signaling","termid":"GO:0086028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"bundle of His cell action potential","synonyms":[{"name":"bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086043"}


id: PBO:0060347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XVB","termid":"PBO:0060347"}


id: PBO:0045478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophin related protein 2","termid":"PBO:0045478"}


id: PBO:0076000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saitohin","termid":"PBO:0076000"}


id: PBO:0030290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_heat_shock","termid":"PBO:0030290"}


id: GO:0001401
data:
  {"annotated_genes":["SJAG_03416","SJAG_01951","SJAG_02355","SJAG_01780"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61861,69746,73140,90160],"is_not":false,"summary":null,"term":"GO:0001401"}]},"cv_name":"cellular_component","definition":"A large complex of the mitochondrial outer membrane that mediates sorting of some imported proteins to the outer membrane and their assembly in the membrane; functions after import of incoming proteins by the mitochondrial outer membrane translocase complex.","definition_xrefs":["PMID:12891361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial outer membrane translocase complex","termid":"GO:0005742"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01780":null,"SJAG_01951":null,"SJAG_02355":null,"SJAG_03416":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"SAM complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TOB complex","type":"exact"},{"name":"mitochondrial sorting and assembly machinery complex","type":"exact"}],"termid":"GO:0001401","terms_by_termid":{"GO:0001401":null}}


id: MONDO:0012480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any transient neonatal diabetes mellitus in which the cause of the disease is a mutation in the ABCC8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transient neonatal diabetes mellitus","termid":"MONDO:0020525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005015","MONDO:0005066"],"is_obsolete":false,"name":"diabetes mellitus, transient neonatal, 2","secondary_identifiers":["SCTID:609580007","UMLS:C1835887","MEDGEN:372150","GARD:15482","MESH:C563672","OMIM:610374"],"synonyms":[{"name":"ABCC8 transient neonatal diabetes mellitus (disease)","type":"exact"},{"name":"Tndm2","type":"related"},{"name":"diabetes mellitus, transient neonatal 2","type":"exact"},{"name":"diabetes mellitus, transient neonatal, 2","type":"exact"},{"name":"diabetes mellitus, transient neonatal, type 2","type":"exact"},{"name":"transient neonatal diabetes mellitus (disease) caused by mutation in ABCC8","type":"exact"}],"termid":"MONDO:0012480","xrefs":{"Monarch":{"xref_id":"0012480"}}}


id: GO:0010965
data:
  {"annotated_genes":["SJAG_02498","SJAG_04999","SJAG_04259","SJAG_03126","SJAG_02380","SJAG_04968","SJAG_00666","SJAG_01330","SJAG_05236","SJAG_03351","SJAG_04884","SJAG_01837","SJAG_02336","SJAG_03048","SJAG_03681","SJAG_01679","SJAG_04573","SJAG_00460","SJAG_03350","SJAG_01082","SJAG_04699","SJAG_02169","SJAG_04126","SJAG_02451","SJAG_01297","SJAG_00883","SJAG_03353","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113570,115693,103686,90516,107029,99392,108049,114058,111752],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[115348,109700,99236,106118,101595,114291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[103073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[93994],"is_not":false,"rel_names":["negatively_regulates","is_a","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[116467],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[101905,114562,93601,99941,102176,111169,97494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[116469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905824"},{"annotations":[96396,99407,99412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901970"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic sister chromatid separation. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome separation","termid":"GO:1905818"},{"relation_name":"regulates","term_name":"mitotic sister chromatid separation","termid":"GO:0051306"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010965","terms_by_termid":{"GO:0007094":null,"GO:0045842":null,"GO:0090267":null,"GO:0140499":null,"GO:1901970":null,"GO:1902426":null,"GO:1905824":null,"GO:2000816":null}}


id: FYPO:0007697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange inhibitor is decreased.","definition_xrefs":["PomBase:mah","PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased DNA strand exchange inhibitor activity","synonyms":[{"name":"decreased RecA-family recombinase inhibitor activity","type":"exact"},{"name":"decreased negative regulation of RecA-family recombinase activity","type":"related"},{"name":"reduced DNA strand exchange inhibitor activity","type":"exact"}],"termid":"FYPO:0007697"}


id: GO:0039642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a virion in which the nucleic acid is confined.","definition_xrefs":["GOC:bm","PMID:14291596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virion nucleoid","termid":"GO:0039642"}


id: PBO:0052986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte associated immunoglobulin like receptor 1","termid":"PBO:0052986"}


id: PBO:0064370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase 2 pseudogene 2","termid":"PBO:0064370"}


id: PBO:0091310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, antisense to tRNA","termid":"PBO:0091310"}


id: MONDO:0014068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cone-rod dystrophy that has material basis in variation in the chromosome region 10q26.","definition_xrefs":["DOID:0111023","PMID:22929024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 17","secondary_identifiers":["MEDGEN:767524","GARD:15914","OMIM:615163","UMLS:C3554610"],"synonyms":[{"name":"CORD17","type":"exact"},{"name":"cone-rod dystrophy 17","type":"exact"},{"name":"cone-rod dystrophy type 17","type":"exact"}],"termid":"MONDO:0014068","xrefs":{"Monarch":{"xref_id":"0014068"}}}


id: PBO:0059614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 26","termid":"PBO:0059614"}


id: GO:1903962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arachidonate from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:15642721","GO_REF:0000066","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transmembrane transporter activity","termid":"GO:0005324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"arachidonate transmembrane transporter activity","synonyms":[{"name":"arachidonate transporter activity","type":"related"},{"name":"arachidonic acid transporter activity","type":"related"}],"termid":"GO:1903962"}


id: PBO:0087167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C37","termid":"PBO:0087167"}


id: GO:0100045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates arginine catabolic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of arginine catabolic process by transcription from RNA polymerase II promoter (obsolete GO:0100045)","termid":"GO:0100045"}


id: PBO:0064386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 8","termid":"PBO:0064386"}


id: MONDO:0008140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ossified ear cartilages","secondary_identifiers":["OMIM:165670","MEDGEN:331587","UMLS:C1833791","MESH:C563488"],"synonyms":[{"name":"ossified ear cartilages","type":"exact"}],"termid":"MONDO:0008140","xrefs":{"Monarch":{"xref_id":"0008140"}}}


id: PBO:0042372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 like, pseudogene","termid":"PBO:0042372"}


id: PBO:0030699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_catalase_activity","termid":"PBO:0030699"}


id: MONDO:0025518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a acetylsalicylic acid.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete aspirin allergy (obsolete MONDO:0025518)","secondary_identifiers":["IEDB:RV","DOID:0040002","SCTID:293586001","ICD9:995.27"],"synonyms":[{"name":"ASA allergy","type":"exact"},{"name":"acetylsalicylic acid allergic disease","type":"exact"},{"name":"acetylsalicylic acid allergy","type":"exact"},{"name":"allergy of acetylsalicylic acid","type":"exact"}],"termid":"MONDO:0025518","xrefs":{"Monarch":{"xref_id":"0025518"}}}


id: GO:0042178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a xenobiotic compound, a compound foreign to the organism exposed to it, carried out by individual cells. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:krc","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xenobiotic catabolic process","secondary_identifiers":["GO:0042738","GO:0042737"],"synonyms":[{"name":"drug breakdown","type":"related"},{"name":"drug catabolic process","type":"related"},{"name":"drug catabolism","type":"related"},{"name":"drug degradation","type":"related"},{"name":"exogenous drug breakdown","type":"related"},{"name":"exogenous drug catabolic process","type":"related"},{"name":"exogenous drug catabolism","type":"related"},{"name":"exogenous drug degradation","type":"related"},{"name":"xenobiotic breakdown","type":"exact"},{"name":"xenobiotic catabolism","type":"exact"},{"name":"xenobiotic degradation","type":"exact"}],"termid":"GO:0042178"}


id: PBO:0003489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NifU-like protein (predicted)","termid":"PBO:0003489"}


id: PBO:0039150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 5","termid":"PBO:0039150"}


id: MONDO:0014111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the LIM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 19 multiple types","secondary_identifiers":["DOID:0110263","OMIM:615277","MEDGEN:815334","UMLS:C3809004"],"synonyms":[{"name":"CTRCT19","type":"exact"},{"name":"LIM2 early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 19","type":"related"},{"name":"cataract 19, multiple types","type":"related"},{"name":"cataract type 19","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in LIM2","type":"exact"}],"termid":"MONDO:0014111","xrefs":{"Monarch":{"xref_id":"0014111"}}}


id: GO:0007549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the variation in the unpaired sex chromosome:autosome chromosome ratios between sexes by activation or inactivation of genes on one or both of the sex chromosomes.","definition_xrefs":["GOC:ems","PMID:30049999","PMID:35306885","PMID:11498577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epigenetic regulation of gene expression","termid":"GO:0040029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"sex-chromosome dosage compensation","secondary_identifiers":["Wikipedia:Sex-chromosome_dosage_compensation"],"synonyms":[{"name":"dosage compensation","type":"broad"},{"name":"sex chromosome dosage compensation","type":"exact"}],"termid":"GO:0007549"}


id: GO:0051445
data:
  {"annotated_genes":["SJAG_00145","SJAG_04813","SJAG_00457","SJAG_04332","SJAG_03720","SJAG_01345","SJAG_01515","SJAG_03438","SJAG_01330","SJAG_03048","SJAG_04287","SJAG_00266","SJAG_01000","SJAG_03486","SJAG_04140","SJAG_06638","SJAG_05153","SJAG_02723","SJAG_04259","SJAG_04682","SJAG_02592","SJAG_01082","SJAG_03854","SJAG_04280","SJAG_00993","SJAG_02481","SJAG_03887","SJAG_01680","SJAG_04126","SJAG_03525","SJAG_00364","SJAG_00987","SJAG_01956","SJAG_03501","SJAG_01401","SJAG_03327","SJAG_02712","SJAG_01837","SJAG_03371","SJAG_05288","SJAG_02404","SJAG_01311","SJAG_02771","SJAG_04853","SJAG_02169","SJAG_01113"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89600,91934,93098,94170,104124],"is_not":false,"summary":null,"term":"GO:0051445"},{"annotations":[107764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[94948,90134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051728"},{"annotations":[114288,106116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[91224,106414,115851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[106415,114048,115852,88847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[116460,75086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[110993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[105771,105613,102158,106448,109061,104238,118161],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:0110045"},{"annotations":[70368,78290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"},{"annotations":[116173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051447"},{"annotations":[98494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[107767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[102086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[90521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[116276,118027],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:0140648"},{"annotations":[73349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[88848,102170,106420,116025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[113575],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[118884,106854,118885,96842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051446"},{"annotations":[94951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[88849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[91984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"},{"annotations":[104717,101421,94337,108840],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:0110044"},{"annotations":[101137],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[96735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0040020"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate or extent of progression through the meiotic cell cycle.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle","termid":"GO:0051726"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic cell cycle","termid":"GO:0051321"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00266":null,"SJAG_00364":null,"SJAG_00457":null,"SJAG_00987":null,"SJAG_00993":null,"SJAG_01000":null,"SJAG_01082":null,"SJAG_01113":null,"SJAG_01311":null,"SJAG_01330":null,"SJAG_01345":null,"SJAG_01401":null,"SJAG_01515":null,"SJAG_01680":null,"SJAG_01837":null,"SJAG_01956":null,"SJAG_02169":null,"SJAG_02404":null,"SJAG_02481":null,"SJAG_02592":null,"SJAG_02712":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_03048":null,"SJAG_03327":null,"SJAG_03371":null,"SJAG_03438":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03525":null,"SJAG_03720":null,"SJAG_03854":null,"SJAG_03887":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_04853":null,"SJAG_05153":null,"SJAG_05288":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"meiotic cell cycle modulation","type":"exact"},{"name":"meiotic cell cycle regulation","type":"exact"},{"name":"meiotic cell cycle regulator","type":"related"},{"name":"modulation of meiotic cell cycle progression","type":"exact"},{"name":"regulation of meiotic cell cycle progression","type":"exact"},{"name":"regulation of progression through meiotic cell cycle","type":"exact"}],"termid":"GO:0051445","terms_by_termid":{"GO:0010845":null,"GO:0010846":null,"GO:0033315":null,"GO:0033316":null,"GO:0034307":null,"GO:0040020":null,"GO:0045128":null,"GO:0051445":null,"GO:0051446":null,"GO:0051447":null,"GO:0051598":null,"GO:0051728":null,"GO:0075296":null,"GO:0075297":null,"GO:0110031":null,"GO:0110032":null,"GO:0110044":null,"GO:0110045":null,"GO:0140648":null,"GO:1902103":null,"GO:1903024":null,"GO:1904514":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0062153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 3 pseudogene","termid":"PBO:0062153"}


id: PBO:0091076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III synthase Ups","termid":"PBO:0091076"}


id: PBO:0039951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ariadne RBR E3 ubiquitin protein ligase 2 pseudogene 1","termid":"PBO:0039951"}


id: GO:0030375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of a transcription cofactor that activates transcription in conjunction with a thyroid hormone-dependent nuclear receptor from a RNA polymerase II promoter; does not bind DNA itself.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete thyroid hormone receptor coactivator activity (obsolete GO:0030375)","synonyms":[{"name":"thyroid hormone receptor activator activity","type":"narrow"},{"name":"thyroid hormone receptor co-activator activity","type":"exact"}],"termid":"GO:0030375"}


id: PBO:0039143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 2","termid":"PBO:0039143"}


id: CHEBI:17326
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside triphosphate","termid":"CHEBI:17326"}


id: PBO:0041240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 105","termid":"PBO:0041240"}


id: FYPO:0000636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell population growth","termid":"FYPO:0001356"},{"relation_name":"is_a","term_name":"increased cell population growth","termid":"FYPO:0003937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"increased cell population growth rate","synonyms":[{"name":"enhanced cell population growth","type":"related"},{"name":"fast cell population growth","type":"exact"},{"name":"increased cell population growth rate during mitotic cell cycle","type":"related"},{"name":"increased cell population growth rate during vegetative growth","type":"exact"},{"name":"increased cell population proliferation","type":"related"},{"name":"increased cell proliferation","type":"related"}],"termid":"FYPO:0000636"}


id: GO:0034733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor TFIIIB-beta complex that contains the TATA-binding protein (TBP), B'' and BRF, and is involved in the regulation of transcription from type 2 RNA polymerase III promoters.","definition_xrefs":["PMID:11433012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor TFIIIB complex","termid":"GO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transcription factor TFIIIB-beta complex","termid":"GO:0034733"}


id: PBO:0086088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase; has specificity for serine, threonine, and tyrosine residues; has a role in the DNA synthesis phase of the cell cycle","termid":"PBO:0086088"}


id: GO:0019001
data:
  {"annotated_genes":["SJAG_00414","SJAG_03188","SJAG_00231","SJAG_01277","SJAG_05332","SJAG_04375","SJAG_02444","SJAG_00983","SJAG_03684","SJAG_04940","SJAG_04233","SJAG_02848","SJAG_01438","SJAG_01379","SJAG_01534","SJAG_03072","SJAG_03461","SJAG_04666","SJAG_02605","SJAG_02302","SJAG_02171","SJAG_00968","SJAG_02384","SJAG_03275","SJAG_00031","SJAG_01449","SJAG_00424","SJAG_00906","SJAG_03959","SJAG_04509","SJAG_01851","SJAG_03137","SJAG_04366","SJAG_03846","SJAG_03374","SJAG_04157","SJAG_00430","SJAG_01695","SJAG_00457","SJAG_02595","SJAG_01358","SJAG_04004","SJAG_01215","SJAG_01558","SJAG_00801","SJAG_02292","SJAG_02824","SJAG_04351","SJAG_01391","SJAG_04003","SJAG_00226","SJAG_02856","SJAG_03915","SJAG_01769","SJAG_01909","SJAG_02374","SJAG_02180","SJAG_04862","SJAG_02520","SJAG_03453","SJAG_05030","SJAG_02604","SJAG_00840","SJAG_02331","SJAG_03371","SJAG_00344","SJAG_00466","SJAG_02366","SJAG_02601","SJAG_01789","SJAG_01929","SJAG_04387","SJAG_04410","SJAG_01339","SJAG_02233","SJAG_00118","SJAG_00044","SJAG_04874","SJAG_02656","SJAG_02509","SJAG_00659","SJAG_02684","SJAG_04343","SJAG_03688","SJAG_01774","SJAG_03342","SJAG_01696","SJAG_02661","SJAG_01456","SJAG_00663","SJAG_00360","SJAG_03732","SJAG_02640","SJAG_02353","SJAG_04470"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72046,91495,74972,92224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019003"},{"annotations":[88675,115481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019002"},{"annotations":[91723,69955,64686,62176,68129,104864,118753,65118,67302,69669,72618,59547,66560,62492,72102,65375,66256,73275,95553,117288,58102,62581,68700,66968,77727,72283,73891,57912,78327,96069,58808,64366,74969,58156,93201,103460,58677,62981,64170,72043,63555,65826,61751,60330,62712,66241,79780,68796,60053,79861,63613,77063,69500,79840,77361,69087,57980,118274,57120,60327,77526,93254,71307,64105,76223,73021,60817,64594,90877,77712,101040,59963,96300,73005,108268,61294,113324,65792,74190,70832,67813,75652,67694,94026,80127,58869,57992,68765,57470,61079,62820,61715,74175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005525"}]},"cv_name":"molecular_function","definition":"Binding to a guanyl nucleotide, consisting of guanosine esterified with (ortho)phosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide binding","termid":"GO:0017076"}],"gene_count":95,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00044":null,"SJAG_00118":null,"SJAG_00226":null,"SJAG_00231":null,"SJAG_00344":null,"SJAG_00360":null,"SJAG_00414":null,"SJAG_00424":null,"SJAG_00430":null,"SJAG_00457":null,"SJAG_00466":null,"SJAG_00659":null,"SJAG_00663":null,"SJAG_00801":null,"SJAG_00840":null,"SJAG_00906":null,"SJAG_00968":null,"SJAG_00983":null,"SJAG_01215":null,"SJAG_01277":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01379":null,"SJAG_01391":null,"SJAG_01438":null,"SJAG_01449":null,"SJAG_01456":null,"SJAG_01534":null,"SJAG_01558":null,"SJAG_01695":null,"SJAG_01696":null,"SJAG_01769":null,"SJAG_01774":null,"SJAG_01789":null,"SJAG_01851":null,"SJAG_01909":null,"SJAG_01929":null,"SJAG_02171":null,"SJAG_02180":null,"SJAG_02233":null,"SJAG_02292":null,"SJAG_02302":null,"SJAG_02331":null,"SJAG_02353":null,"SJAG_02366":null,"SJAG_02374":null,"SJAG_02384":null,"SJAG_02444":null,"SJAG_02509":null,"SJAG_02520":null,"SJAG_02595":null,"SJAG_02601":null,"SJAG_02604":null,"SJAG_02605":null,"SJAG_02640":null,"SJAG_02656":null,"SJAG_02661":null,"SJAG_02684":null,"SJAG_02824":null,"SJAG_02848":null,"SJAG_02856":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03188":null,"SJAG_03275":null,"SJAG_03342":null,"SJAG_03371":null,"SJAG_03374":null,"SJAG_03453":null,"SJAG_03461":null,"SJAG_03684":null,"SJAG_03688":null,"SJAG_03732":null,"SJAG_03846":null,"SJAG_03915":null,"SJAG_03959":null,"SJAG_04003":null,"SJAG_04004":null,"SJAG_04157":null,"SJAG_04233":null,"SJAG_04343":null,"SJAG_04351":null,"SJAG_04366":null,"SJAG_04375":null,"SJAG_04387":null,"SJAG_04410":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04862":null,"SJAG_04874":null,"SJAG_04940":null,"SJAG_05030":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"guanyl nucleotide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-156909"],"termid":"GO:0019001","terms_by_termid":{"GO:0005525":null,"GO:0019002":null,"GO:0019003":null}}


id: PBO:0028527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_centromere_central_core","termid":"PBO:0028527"}


id: PBO:0066256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX2 pseudogene 4","termid":"PBO:0066256"}


id: GO:0031566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular process in which the contractile ring cytokinetic ring attains its fully functional state.","definition_xrefs":["PMID:25451933","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"actomyosin contractile ring organization","termid":"GO:0044837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actomyosin contractile ring maturation","synonyms":[{"name":"actomyosin contractile ring maintenance","type":"related"},{"name":"cytokinesis, contractile ring maintenance","type":"related"}],"termid":"GO:0031566"}


id: GO:0102272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: glutathionate + a poly gamma-glutamylcysteine-beta-alanine = glycine + a poly gamma-glutamylcysteine-beta-alanine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete homophytochelatin synthase activity (polymer-forming) (obsolete GO:0102272)","termid":"GO:0102272"}


id: PBO:0069391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 651, pseudogene","termid":"PBO:0069391"}


id: GO:1901006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ubiquinone-6.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquinone-6 biosynthetic process (obsolete GO:1901006)","synonyms":[{"name":"ubiquinone-6 anabolism","type":"exact"},{"name":"ubiquinone-6 biosynthesis","type":"exact"},{"name":"ubiquinone-6 formation","type":"exact"},{"name":"ubiquinone-6 synthesis","type":"exact"}],"termid":"GO:1901006"}


id: PBO:0042746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein T","termid":"PBO:0042746"}


id: MONDO:0021292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the body of stomach.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric body carcinoma","termid":"MONDO:0003972"},{"relation_name":"is_a","term_name":"stomach carcinoma in situ","termid":"MONDO:0004716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma in situ of gastric body","secondary_identifiers":["SCTID:92549006","MEDGEN:87516","NCIT:C4430","UMLS:C0345805"],"synonyms":[{"name":"body of stomach carcinoma in situ","type":"exact"},{"name":"body of stomach in situ carcinoma","type":"exact"},{"name":"carcinoma in situ of body of stomach","type":"exact"},{"name":"carcinoma in situ of the body of the stomach","type":"exact"},{"name":"carcinoma in situ of the gastric body","type":"exact"},{"name":"gastric body carcinoma in situ","type":"exact"},{"name":"gastric body carcinoma in situ aJCC v6 and v7","type":"exact"},{"name":"stage 0 body of stomach carcinoma","type":"exact"},{"name":"stage 0 gastric body carcinoma","type":"exact"}],"termid":"MONDO:0021292","xrefs":{"Monarch":{"xref_id":"0021292"}}}


id: GO:0034766
data:
  {"annotated_genes":["SJAG_00296","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91012,113153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transport","termid":"GO:0034765"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"negatively_regulates","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of monoatomic ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transmembrane ion transport","type":"exact"},{"name":"down-regulation of transmembrane ion transport","type":"exact"},{"name":"downregulation of transmembrane ion transport","type":"exact"},{"name":"inhibition of transmembrane ion transport","type":"narrow"},{"name":"negative regulation of ion membrane transport","type":"exact"},{"name":"negative regulation of ion transmembrane transport","type":"broad"},{"name":"negative regulation of transmembrane ion transport","type":"exact"}],"termid":"GO:0034766","terms_by_termid":{"GO:1905949":null}}


id: PBO:0056069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member E","termid":"PBO:0056069"}


id: PBO:0036462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg16","termid":"PBO:0036462"}


id: GO:1901855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 5,6,7,8-tetrahydrosarcinapterin.","definition_xrefs":["UniPathway:UPA00069","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid biosynthetic process","termid":"GO:0072351"},{"relation_name":"is_a","term_name":"5,6,7,8-tetrahydrosarcinapterin metabolic process","termid":"GO:1901853"},{"relation_name":"is_a","term_name":"tetrahydromethanopterin biosynthetic process","termid":"GO:2001118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0042559","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"5,6,7,8-tetrahydrosarcinapterin biosynthetic process","synonyms":[{"name":"5,6,7,8-tetrahydrosarcinapterin anabolism","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin biosynthesis","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin formation","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin synthesis","type":"exact"}],"termid":"GO:1901855"}


id: PBO:0017672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium ion channel Cch1","termid":"PBO:0017672"}


id: GO:0018050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-threonine amide by hydrolysis and oxidation of an interior Thr-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0097"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-threonine amidation (obsolete GO:0018050)","termid":"GO:0018050"}


id: PBO:0088828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMP deaminase family/ methyltransferase bifunctional enzyme involved in riboflavin biosynthesis and tRNA pseudouridine biosynthesis Rib2","termid":"PBO:0088828"}


id: PBO:0027738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphatase_activity","termid":"PBO:0027738"}


id: PR:O74825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02695","PANTHER:PTHR21297:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit rpb4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.14","secondary_identifiers":["UniProtKB:O74825"],"synonyms":[{"name":"RNA polymerase II subunit B4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2D","type":"exact"}],"termid":"PR:O74825"}


id: PBO:0080810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6","termid":"PBO:0080810"}


id: PBO:0065174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokineticin receptor 2","termid":"PBO:0065174"}


id: PBO:0016546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, potassium exporting Cta3","termid":"PBO:0016546"}


id: FYPO:0002501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein palmitoylation is normal (i.e. indistinguishable from wild type) during one or both meiotic nuclear divisions. Protein palmitoylation is the addition of a palmitoyl group to a protein amino acid.","definition_xrefs":["GO:0018345","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein palmitoylation","termid":"FYPO:0002500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein palmitoylation during meiosis","synonyms":[{"name":"normal protein palmitoylation during meiotic nuclear division","type":"exact"},{"name":"normal protein/peptide palmitoylation during meiosis","type":"exact"}],"termid":"FYPO:0002501"}


id: PBO:0029039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glycerol_level","termid":"PBO:0029039"}


id: GO:1902962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of metalloendopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["GOC:sjp","GO_REF:0000059","PMID:18362153","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process (obsolete GO:1902962)","synonyms":[{"name":"regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902962"}


id: PBO:0038354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_effector_activity","termid":"PBO:0038354"}


id: GO:0075341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body that reacts against SP100 auto-antibodies (PML = promyelocytic leukemia) located within a cell of a host organism.","definition_xrefs":["GOC:BHF","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell PML body","synonyms":[{"name":"host cell PML NB","type":"exact"},{"name":"host cell PML nuclear body","type":"exact"}],"termid":"GO:0075341"}


id: GO:0004654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA(n+1) + phosphate = RNA(n) + a nucleoside diphosphate.","definition_xrefs":["EC:2.7.7.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"polyribonucleotide nucleotidyltransferase activity","secondary_identifiers":["RHEA:22096","MetaCyc:2.7.7.8-RXN"],"synonyms":[{"name":"nucleoside diphosphate:polynucleotidyl transferase activity","type":"related"},{"name":"polynucleotide phosphorylase activity","type":"related"},{"name":"polyribonucleotide phosphorylase activity","type":"related"},{"name":"polyribonucleotide:phosphate nucleotidyltransferase activity","type":"related"}],"termid":"GO:0004654"}


id: PBO:0043057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline phosphotransferase 1","termid":"PBO:0043057"}


id: PBO:0039216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C7, pseudogene","termid":"PBO:0039216"}


id: GO:0009149
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine nucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate catabolic process","termid":"GO:0009143"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate metabolic process","termid":"GO:0009147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine nucleoside triphosphate breakdown","type":"exact"},{"name":"pyrimidine nucleoside triphosphate catabolism","type":"exact"},{"name":"pyrimidine nucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009149","terms_by_termid":{"GO:0046081":null}}


id: GO:0008937
data:
  {"annotated_genes":["SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008860"},{"annotations":[109477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004324"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced ferredoxin + NAD(P)+ = oxidized ferredoxin + NAD(P)H + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor","termid":"GO:0016731"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ferredoxin-[NAD(P)H] reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ferredoxin reductase activity","type":"broad"}],"termid":"GO:0008937","terms_by_termid":{"GO:0004324":null,"GO:0008860":null}}


id: MONDO:0019949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-actinopathy","termid":"MONDO:0100084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"zebra body myopathy","secondary_identifiers":["MEDGEN:543080","Orphanet:97240","GARD:19354","icd11.foundation:1699813614","SCTID:34513009","UMLS:C0270969","ICD9:359.89"],"termid":"MONDO:0019949","xrefs":{"Monarch":{"xref_id":"0019949"}}}


id: FYPO:0002400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed during mitotic interphase in which all detectable microtubules are present in a single bundle.","definition_xrefs":["PomBase:mlr","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0002399"],"is_obsolete":false,"name":"single microtubule bundle during mitotic interphase","synonyms":[{"name":"single MT bundle during mitotic interphase","type":"exact"},{"name":"single microtubule array during mitotic interphase","type":"exact"}],"termid":"FYPO:0002400"}


id: PBO:0064532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit K","termid":"PBO:0064532"}


id: MONDO:0000668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to orient parts of the body.","definition_xrefs":["DOID:0060138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autotopagnosia","secondary_identifiers":["MEDGEN:65883","UMLS:C0234511"],"termid":"MONDO:0000668","xrefs":{"Monarch":{"xref_id":"0000668"}}}


id: PR:P48003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pht1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P48003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.Z (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.10c","synonyms":[{"name":"Spom972h-pht1","type":"exact"}],"termid":"PR:P48003"}


id: MOD:01996
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an butanoyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butanoylated residue","synonyms":[{"name":"ButRes","type":"exact"},{"name":"Butyryl","type":"related"},{"name":"butyrylation","type":"exact"}],"termid":"MOD:01996"}


id: GO:0035250
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose group from UDP-galactose to an acceptor molecule.","definition_xrefs":["PMID:19858195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"UDP-galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0035250","terms_by_termid":{"GO:0047220":null}}


id: PBO:0081164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger TRAF-type containing 1","termid":"PBO:0081164"}


id: PBO:0050075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxymethylcytosine binding, ES cell specific","termid":"PBO:0050075"}


id: PBO:0089330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain-containing protein Tlc4","termid":"PBO:0089330"}


id: PBO:0046249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 5","termid":"PBO:0046249"}


id: PBO:0083350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene HED1/YDR014W-A","termid":"PBO:0083350"}


id: PBO:0003559
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysmal nocturnal haemoglobinuri","termid":"PBO:0003559"}


id: PBO:0043083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic beta 3 subunit","termid":"PBO:0043083"}


id: MONDO:0016588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infantile mercury poisoning is a rare intoxication affecting children, most commonly characterized by erythema of the hands, feet and nose, edematous, painful, pink to red, desquamating fingers and toes, bluish, cold and wet extremities, excessive sweating, irritability, photophobia, muscle weakness, diffuse hypotonia, paresthesia, hypertension and tachycardia, due to elemental, organic or inorganic mercury exposure. Additional manifestations include alopecia, loss of appetite, excessive salivation with red and swollen gums, tooth and nail loss, and insomnia.","definition_xrefs":["Orphanet:247165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile mercury poisoning","secondary_identifiers":["SCTID:66695004","MESH:D000170","GARD:20653"],"synonyms":[{"name":"Feer disease","type":"exact"},{"name":"Swift disease","type":"exact"},{"name":"Swift-Feer disease","type":"exact"},{"name":"erythroedema polyneuritis","type":"exact"},{"name":"infantile acrodynia","type":"exact"},{"name":"infantile mercury intoxication","type":"exact"},{"name":"pink disease","type":"exact"}],"termid":"MONDO:0016588","xrefs":{"Monarch":{"xref_id":"0016588"}}}


id: GO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains an RNA polymerase II specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II activity (obsolete GO:0001055)","secondary_identifiers":["Reactome:R-HSA-6814549","Reactome:R-HSA-6814559"],"synonyms":[{"name":"DNA-directed RNA polymerase activity involved in transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001055"}


id: GO:0006780
data:
  {"annotated_genes":["SJAG_05283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74818],"is_not":false,"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of uroporphyrinogen III.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound biosynthetic process","termid":"GO:0006779"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"uroporphyrinogen III metabolic process","termid":"GO:0046502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"uroporphyrinogen III biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"uroporphyrinogen III anabolism","type":"exact"},{"name":"uroporphyrinogen III biosynthesis","type":"exact"},{"name":"uroporphyrinogen III formation","type":"exact"},{"name":"uroporphyrinogen III synthesis","type":"exact"}],"termid":"GO:0006780","terms_by_termid":{"GO:0006780":null}}


id: GO:0034705
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ion channel complex through which potassium ions pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"potassium channel complex","termid":"GO:0034705"}


id: PBO:0087297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single-stranded DNA endonuclease (with Rad1p); cleaves single-stranded DNA during nucleotide excision repair and double-strand break repair; subunit of Nucleotide Excision Repair Factor 1 (NEF1); homolog of human ERCC1 protein","termid":"PBO:0087297"}


id: _global:causally_upstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"_global:causal_relation_between_processes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within","secondary_identifiers":["RO:0002418"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:causally_upstream_of_or_within"}


id: MONDO:0017307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"inborn disorder of phenylalanine and tyrosine metabolism","termid":"MONDO:0019235"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"disorder of tyrosine metabolism","secondary_identifiers":["SCTID:37200009","GARD:21127","icd11.foundation:1842978338","UMLS:C0268482","ICD9:270.2","MEDGEN:541330","Orphanet:284818"],"termid":"MONDO:0017307","xrefs":{"Monarch":{"xref_id":"0017307"}}}


id: GO:0006245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of TDP, ribosylthymine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"TDP metabolic process","termid":"GO:0046043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"TDP catabolic process","synonyms":[{"name":"TDP breakdown","type":"exact"},{"name":"TDP catabolism","type":"exact"},{"name":"TDP degradation","type":"exact"}],"termid":"GO:0006245"}


id: GO:0042294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of URM1 from one protein to another via the reaction X-URM1 + Y = Y-URM1 + X, where both X-URM1 and Y-URM1 are covalent linkages.","definition_xrefs":["GOC:mah","PMID:12826404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0016746","GO:0019787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"URM1 transferase activity","termid":"GO:0042294"}


id: PBO:0063133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0063133"}


id: PBO:0045974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain binding protein 1 like 1","termid":"PBO:0045974"}


id: MONDO:0013780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that has material basis in variation in the chromosome region 6q23.","definition_xrefs":["PMID:22083234","DOID:0110385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 63","secondary_identifiers":["ICD10CM:H35.5","GARD:15810","MEDGEN:482632","OMIM:614494","UMLS:C3281002"],"synonyms":[{"name":"RP63","type":"exact"},{"name":"retinitis pigmentosa 63","type":"exact"},{"name":"retinitis pigmentosa type 63","type":"exact"}],"termid":"MONDO:0013780","xrefs":{"Monarch":{"xref_id":"0013780"}}}


id: PBO:0074117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 3","termid":"PBO:0074117"}


id: PBO:0060240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding protein C3","termid":"PBO:0060240"}


id: PBO:0038763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 3C","termid":"PBO:0038763"}


id: GO:0048364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the root over time, from its formation to the mature structure. The root is the water- and mineral-absorbing part of a plant which is usually underground, does not bear leaves, tends to grow downwards and is typically derived from the radicle of the embryo.","definition_xrefs":["PO:0009005","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"root system development","termid":"GO:0022622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root development","termid":"GO:0048364"}


id: PBO:0029725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis,_with_abnormal_nuclear_division","termid":"PBO:0029725"}


id: MONDO:1011300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute disease, non-human animal","termid":"MONDO:1011300","xrefs":{"Monarch":{"xref_id":"1011300"}}}


id: GO:0032837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during a normally chiasmate meiosis under the condition that chiasma have not occurred between a particular pair of homologs. Distributive segregation is a backup mechanism to ensure the segregation of homologs that have failed to cross over - either as a consequence of mutation or not, as, for example, the 4th chromosome of Drosophila melanogaster (which never exchanges, presumably due to its small size) - but nevertheless segregate normally.","definition_xrefs":["GOC:ma","GOC:sart","GOC:expert_rsh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"distributive segregation","termid":"GO:0032837"}


id: PBO:0075777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 6","termid":"PBO:0075777"}


id: GO:0042044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances that are in liquid form in normal living conditions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"fluid transport","termid":"GO:0042044"}


id: PBO:0075191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 3","termid":"PBO:0075191"}


id: GO:0042197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving halogenated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with halogen atoms. Halogens include fluorine, chlorine, bromine and iodine.","definition_xrefs":["GOC:ai","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"halogenated hydrocarbon metabolic process","synonyms":[{"name":"halogenated hydrocarbon metabolism","type":"exact"}],"termid":"GO:0042197"}


id: PBO:0017671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR79 (predicted)","termid":"PBO:0017671"}


id: PBO:0077339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 78","termid":"PBO:0077339"}


id: PBO:0055048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2463","termid":"PBO:0055048"}


id: MONDO:0015304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arachnoiditis (ARC) is a chronic inflammation of the arachnoid layer of the meninges, of which adhesive arachnoiditis is the most severe form, characterized by debilitating, intractable neurogenic back and limb pain and a range of other neurological problems.","definition_xrefs":["Orphanet:137817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious meningitis","termid":"MONDO:0004796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachnoiditis","secondary_identifiers":["UMLS:C0003708","DOID:12156","MedDRA:10003074","icd11.foundation:414817254","GARD:5839","MESH:D001100","NORD:800","SCTID:13980006","MEDGEN:8175","NCIT:C37913"],"synonyms":[{"name":"adhesive arachnoiditis","type":"exact"},{"name":"arachnoid mater inflammation","type":"exact"},{"name":"chronic arachnoiditis","type":"exact"},{"name":"inflammation of arachnoid mater","type":"exact"}],"termid":"MONDO:0015304","xrefs":{"Monarch":{"xref_id":"0015304"}}}


id: PBO:0067035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 49, pseudogene","termid":"PBO:0067035"}


id: SO:0000537
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"12 or 23 nucleotide spacer between the V-heptamer and the V-nonamer of a V-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_spacer","termid":"SO:0000563"},{"relation_name":"part_of","term_name":"V_gene_recombination_feature","termid":"SO:0000538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_spacer","synonyms":[{"name":"V spacer","type":"exact"},{"name":"V-SPACER","type":"exact"}],"termid":"SO:0000537"}


id: GO:1901271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipooligosaccharide.","definition_xrefs":["GOC:yaf","UniPathway:UPA00501","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide biosynthetic process","synonyms":[{"name":"lipooligosaccharide anabolism","type":"exact"},{"name":"lipooligosaccharide biosynthesis","type":"exact"},{"name":"lipooligosaccharide formation","type":"exact"},{"name":"lipooligosaccharide synthesis","type":"exact"}],"termid":"GO:1901271"}


id: PBO:0071031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 33","termid":"PBO:0071031"}


id: PBO:0031505
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_K-252a","termid":"PBO:0031505"}


id: GO:0015204
data:
  {"annotated_genes":["SJAG_02125"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70394],"is_not":false,"summary":null,"term":"GO:0015204"}]},"cv_name":"molecular_function","definition":"Enables the transfer of urea from one side of a membrane to the other. Urea is the water soluble compound H2N-CO-NH2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"urea transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0015287","Reactome:R-HSA-444126"],"synonyms":[{"name":"urea transporter activity","type":"broad"}],"termid":"GO:0015204","terms_by_termid":{"GO:0015204":null}}


id: GO:0060917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->6)-beta-D-glucans.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan biosynthetic process","termid":"GO:0032951"},{"relation_name":"regulates","term_name":"(1->6)-beta-D-glucan biosynthetic process","termid":"GO:0006078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of (1->6)-beta-D-glucan biosynthetic process","synonyms":[{"name":"regulation of 1,6-beta-glucan biosynthetic process","type":"exact"}],"termid":"GO:0060917"}


id: SO:0000539
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one DJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DJ_C_cluster","synonyms":[{"name":"(DJ)-C-CLUSTER","type":"exact"},{"name":"DJ C cluster","type":"exact"}],"termid":"SO:0000539"}


id: MOD:00724
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom on a nitrogen of an L-histidine residue with one methyl group.","definition_xrefs":["Unimod:34#H","OMSSA:74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated histidine","termid":"MOD:00661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated L-histidine","synonyms":[{"name":"Methyl","type":"related"},{"name":"NMeHis","type":"exact"},{"name":"methylh","type":"exact"}],"termid":"MOD:00724"}


id: PBO:0040046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 2","termid":"PBO:0040046"}


id: MONDO:0030606
data:
  {"annotated_genes":["SJAG_00302","SJAG_00335","SJAG_03543"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86891,86892,86893],"is_not":false,"summary":null,"term":"MONDO:0030606"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bryant-Li-Bhoj neurodevelopmental syndrome","termid":"MONDO:0031200"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_03543":null},"genotype_count":0,"is_obsolete":false,"name":"Bryant-Li-Bhoj neurodevelopmental syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1801103","UMLS:C5676905","OMIM:619720"],"synonyms":[{"name":"BRYLIB1","type":"exact"}],"termid":"MONDO:0030606","terms_by_termid":{"MONDO:0030606":null},"xrefs":{"Monarch":{"xref_id":"0030606"}}}


id: PBO:0029982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_mononucleate_vegetative_cell","termid":"PBO:0029982"}


id: PBO:0073133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 5","termid":"PBO:0073133"}


id: GO:0019176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydroneopterin monophosphate = dihydroneopterin + phosphate.","definition_xrefs":["MetaCyc:DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydroneopterin monophosphate phosphatase activity","secondary_identifiers":["RHEA:25306"],"synonyms":[{"name":"dihydroneopterin monophosphate dephosphorylase activity","type":"exact"}],"termid":"GO:0019176"}


id: PBO:0114107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane DUF2015 family conserved fungal protein","termid":"PBO:0114107"}


id: PBO:0068207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 514","termid":"PBO:0068207"}


id: PBO:0002836
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by salt stress","termid":"PBO:0002836"}


id: PATO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal orientation","synonyms":[{"name":"dorsally directed","type":"exact"}],"termid":"PATO:0002495"}


id: GO:0002047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a phenazine antibiotic, a polycyclic pyrazine with two nitrogen atoms in the ring.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenazine biosynthetic process","synonyms":[{"name":"acridizine biosynthesis","type":"related"},{"name":"acridizine biosynthetic process","type":"related"},{"name":"azophenylene biosynthesis","type":"related"},{"name":"azophenylene biosynthetic process","type":"related"},{"name":"dibenzo-p-diazine biosynthesis","type":"related"},{"name":"dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"dibenzopyrazine biosynthesis","type":"related"},{"name":"dibenzopyrazine biosynthetic process","type":"related"}],"termid":"GO:0002047"}


id: PBO:0027195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_lateral_cell_cortex","termid":"PBO:0027195"}


id: GO:0075229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of encysted zoospore germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of encysted zoospore germination","termid":"GO:0075227"},{"relation_name":"is_a","term_name":"negative regulation of spore germination","termid":"GO:1904360"},{"relation_name":"negatively_regulates","term_name":"encysted zoospore germination","termid":"GO:0075226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of encysted zoospore germination","synonyms":[{"name":"negative regulation of encysted zoospore germination on or near host","type":"exact"}],"termid":"GO:0075229"}


id: PBO:0087942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor eIF-5A; previously thought to function in translation initiation; undergoes an essential hypusination modification; expressed under anaerobic conditions; ANB1 has a paralog, HYP2, that arose from the whole genome duplication; human EIF5A complements the inviability of the yeast hyp2 anb1 double null mutant","termid":"PBO:0087942"}


id: GO:0016024
data:
  {"annotated_genes":["SJAG_00426","SJAG_03563","SJAG_00168","SJAG_01233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79904,112810,114468,119279],"is_not":false,"summary":null,"term":"GO:0016024"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CDP-diacylglycerol, CDP-1,2-diacylglycerol, a substance composed of diacylglycerol in glycosidic linkage with cytidine diphosphate.","definition_xrefs":["PMID:24533860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-diacylglycerol metabolic process","termid":"GO:0046341"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00426":null,"SJAG_01233":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"CDP-diacylglycerol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25318672":null},"synonyms":[{"name":"CDP-diacylglycerol anabolism","type":"exact"},{"name":"CDP-diacylglycerol biosynthesis","type":"exact"},{"name":"CDP-diacylglycerol formation","type":"exact"},{"name":"CDP-diacylglycerol synthesis","type":"exact"}],"termid":"GO:0016024","terms_by_termid":{"GO:0016024":null}}


id: PBO:0084591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YFL043C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YFL042C","termid":"PBO:0084591"}


id: PBO:0058051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4272","termid":"PBO:0058051"}


id: PBO:0089836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin family glycoprotein receptor Emp46","termid":"PBO:0089836"}


id: GO:0031626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to beta-endorphin, a peptide generated by the cleavage of pro-opiomelanocortin.","definition_xrefs":["GOC:nln","PMID:6267560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"beta-endorphin binding","termid":"GO:0031626"}


id: MOD:00112
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-12-hydroxyfarnesyl-L-cysteine.","definition_xrefs":["Unimod:376","RESID:AA0103","PubMed:17790543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated cysteine","termid":"MOD:01110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155","MOD:00905"],"is_obsolete":false,"name":"S-12-hydroxyfarnesyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2E,6E,10Z)-12-hydroxy-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]sulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(12-hydroxy-3,7,11-trimethyl-3,6,10-dodecatrienylthio)propanoic acid","type":"exact"},{"name":"Hydroxyfarnesyl","type":"related"},{"name":"LIPID S-12-hydroxyfarnesyl cysteine","type":"exact"},{"name":"S-12-hydroxyfarnesyl-L-cysteine","type":"exact"},{"name":"S12HyFarnCys","type":"exact"},{"name":"hydroxyfarnesyl","type":"related"}],"termid":"MOD:00112"}


id: PBO:0076543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taspase 1","termid":"PBO:0076543"}


id: MONDO:0030517
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85899],"is_not":false,"summary":null,"term":"MONDO:0030517"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"trichothiodystrophy","termid":"MONDO:0018053"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy 8, nonphotosensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619691","MEDGEN:1794267","UMLS:C5562057"],"synonyms":[{"name":"TTD8","type":"exact"}],"termid":"MONDO:0030517","terms_by_termid":{"MONDO:0030517":null},"xrefs":{"Monarch":{"xref_id":"0030517"}}}


id: GO:1905648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shell calcification.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:14648763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biomineral tissue development","termid":"GO:0070167"},{"relation_name":"regulates","term_name":"shell calcification","termid":"GO:0031215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shell calcification","termid":"GO:1905648"}


id: PBO:0026891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_kinetochore","termid":"PBO:0026891"}


id: PBO:0076056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin like 2","termid":"PBO:0076056"}


id: GO:1904275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a tricellular tight junction into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:mr","GOC:TermGenie","PMID:22640933","PMID:25097825","PMID:4203962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction disassembly","termid":"GO:1905071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricellular tight junction disassembly","termid":"GO:1904275"}


id: PBO:0074250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1A2","termid":"PBO:0074250"}


id: GO:0062073
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex composed of a stem-loop binding protein (in most species SLBP) and its interacting partner (SLIP1 or MIF4GD in most species) that binds to the histone mRNA (hmRNA) 3-prime-stem-loop structure. Facilitates hmRNA translation initiation and may also be involved in its processing and nuclear export.","definition_xrefs":["PMID:23286197","GOC:bhm","PMID:18025107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"histone mRNA stem-loop binding complex","synonyms":[{"name":"SLBP-MIF4GD complex","type":"narrow"},{"name":"SLBP-SLIP1 complex","type":"narrow"}],"termid":"GO:0062073"}


id: GO:0016772
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id: MONDO:0002399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-circumscribed, lobulated tumor, completely or partially covered by a fibrous capsule. It usually arises in the fingers. It is characterized by the presence of mononuclear cells, multinucleated osteoclast-like giant cells, hemosiderin-laden macrophages, foam cells, and an inflammatory infiltrate. The tumor is slow-growing, usually developing over several years. Clinical presentation includes painless edema of the affected site.","definition_xrefs":["NCIT:C6532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tenosynovial giant cell tumor","termid":"MONDO:0002522"},{"relation_name":"is_a","term_name":"benign synovial neoplasm","termid":"MONDO:0024715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenosynovial giant cell tumor, localized type","secondary_identifiers":["UMLS:C0588125","MEDGEN:154413","ICD9:727.02","DOID:2701","SCTID:95413004"],"synonyms":[{"name":"benign synovioma","type":"related"},{"name":"benign tumor of synovium","type":"related"},{"name":"benign tumour of synovium","type":"related"},{"name":"localised giant cell neoplasm of Tenosynovium","type":"exact"},{"name":"localised giant cell neoplasm of tendon sheath","type":"exact"},{"name":"localised giant cell neoplasm of the Tenosynovium","type":"exact"},{"name":"localised giant cell tumour of Tenosynovium","type":"exact"},{"name":"localised giant cell tumour of tendon sheath","type":"exact"},{"name":"localised giant cell tumour of the Tenosynovium","type":"exact"},{"name":"localised tenosynovial giant cell neoplasm","type":"exact"},{"name":"localised tenosynovial giant cell tumour","type":"exact"},{"name":"localized giant cell neoplasm of Tenosynovium","type":"exact"},{"name":"localized giant cell neoplasm of tendon sheath","type":"exact"},{"name":"localized giant cell neoplasm of the Tenosynovium","type":"exact"},{"name":"localized giant cell tumor of Tenosynovium","type":"exact"},{"name":"localized giant cell tumor of tendon sheath","type":"exact"},{"name":"localized giant cell tumor of the Tenosynovium","type":"exact"},{"name":"localized tenosynovial giant cell neoplasm","type":"exact"},{"name":"localized tenosynovial giant cell tumor","type":"exact"},{"name":"nodular tenosynovitis","type":"exact"},{"name":"synovioma, benign (morphologic abnormality)","type":"exact"},{"name":"tenosynovial giant cell tumor, localized type","type":"exact"}],"termid":"MONDO:0002399","xrefs":{"Monarch":{"xref_id":"0002399"}}}


id: GO:0031065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone deacetylation (obsolete GO:0031065)","synonyms":[{"name":"activation of histone deacetylation","type":"narrow"},{"name":"stimulation of histone deacetylation","type":"narrow"},{"name":"up regulation of histone deacetylation","type":"exact"},{"name":"up-regulation of histone deacetylation","type":"exact"},{"name":"upregulation of histone deacetylation","type":"exact"}],"termid":"GO:0031065"}


id: GO:2000798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amniotic stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesenchymal stem cell differentiation","termid":"GO:2000740"},{"relation_name":"is_a","term_name":"regulation of amniotic stem cell differentiation","termid":"GO:2000797"},{"relation_name":"negatively_regulates","term_name":"amniotic stem cell differentiation","termid":"GO:0097086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amniotic stem cell differentiation","termid":"GO:2000798"}


id: MONDO:0015793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiminicore myopathy","termid":"MONDO:0018948"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moderate multiminicore disease with hand involvement","secondary_identifiers":["GARD:17078","Orphanet:178145","UMLS:C1861753","MEDGEN:396213"],"termid":"MONDO:0015793","xrefs":{"Monarch":{"xref_id":"0015793"}}}


id: MONDO:0001769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nasolacrimal duct disorder","termid":"MONDO:0044984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acquired tear duct stenosis","secondary_identifiers":["SCTID:193995004","UMLS:C0155248","ICD9:375.56","DOID:13655","MEDGEN:509872"],"synonyms":[{"name":"acquired nasolacrimal duct stenosis","type":"exact"},{"name":"acquired stenosis of nasolacrimal duct","type":"exact"},{"name":"stenosis of nasolacrimal duct, acquired","type":"exact"},{"name":"tear duct - acquired stenosis","type":"exact"}],"termid":"MONDO:0001769","xrefs":{"Monarch":{"xref_id":"0001769"}}}


id: PBO:0049808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 2","termid":"PBO:0049808"}


id: FYPO:0000730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the spindle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002399","FYPO:0000120","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"long spindle","synonyms":[{"name":"elongated spindle","type":"exact"},{"name":"increased spindle length","type":"exact"},{"name":"long spindles","type":"exact"}],"termid":"FYPO:0000730"}


id: PBO:0085121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; essential for processing and maturation of 27S pre-rRNA and large ribosomal subunit biogenesis; constituent of 66S pre-ribosomal particles; contains four RNA recognition motifs (RRMs); human ortholog RBM28 implicated in ANE syndrome","termid":"PBO:0085121"}


id: GO:0097402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a neuroblast from one site to another, often during the development of a multicellular organism or multicellular structure. A neuroblast is any cell that will divide and give rise to a neuron.","definition_xrefs":["PMID:15543145","GOC:jc","CL:0000031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast migration","termid":"GO:0097402"}


id: PBO:0085999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Listeria monocytogenes major sigma factor (rpoD gene product); the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085999"}


id: MONDO:0044351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Schistosoma intercalatum.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schistosomiasis","termid":"MONDO:0015254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schistosoma intercalatum infectious disease","secondary_identifiers":["ICD9:120.8","SCTID:52179003","MEDGEN:124448","NCIT:C35364","UMLS:C0276932"],"synonyms":[{"name":"Schistosoma intercalatum caused disease or disorder","type":"exact"},{"name":"Schistosoma intercalatum disease or disorder","type":"exact"},{"name":"infection by Schistosoma intercalatum","type":"exact"},{"name":"infection caused by Schistosoma intercalatum","type":"related"}],"termid":"MONDO:0044351","xrefs":{"Monarch":{"xref_id":"0044351"}}}


id: MONDO:0013432
data:
  {"annotated_genes":["SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86698],"is_not":false,"summary":null,"term":"MONDO:0013432"}]},"cv_name":"mondo","definition":"Any Meier-Gorlin syndrome in which the cause of the disease is a mutation in the CDC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meier-Gorlin syndrome","termid":"MONDO:0016817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462476","OMIM:613805","DOID:0080516","GARD:15712","UMLS:C3151126"],"synonyms":[{"name":"CDC6 Meier-Gorlin syndrome","type":"exact"},{"name":"MGORS5","type":"related"},{"name":"Meier-GORLIN syndrome 5","type":"related"},{"name":"Meier-Gorlin syndrome 5","type":"exact"},{"name":"Meier-Gorlin syndrome caused by mutation in CDC6","type":"exact"},{"name":"Meier-Gorlin syndrome type 5","type":"exact"}],"termid":"MONDO:0013432","terms_by_termid":{"MONDO:0013432":null},"xrefs":{"Monarch":{"xref_id":"0013432"}}}


id: GO:0048796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a swim bladder to attain its fully functional state. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ maturation","termid":"GO:0048799"},{"relation_name":"part_of","term_name":"swim bladder development","termid":"GO:0048794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder maturation","synonyms":[{"name":"gas bladder maturation","type":"exact"}],"termid":"GO:0048796"}


id: PBO:0052416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains and short cytoplasmic tail 1","termid":"PBO:0052416"}


id: PBO:0077338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 74B","termid":"PBO:0077338"}


id: PBO:0028283
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_silent_mating-type_cassette","termid":"PBO:0028283"}


id: PBO:0079055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 11-1","termid":"PBO:0079055"}


id: PBO:0079351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB bipartite transcription factor","termid":"PBO:0079351"}


id: GO:0018032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Addition of an amide group from a glycine to a protein amino acid.","definition_xrefs":["UniProtKB-KW:KW-0027"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amidation (obsolete GO:0018032)","synonyms":[{"name":"protein amino acid amidation","type":"exact"}],"termid":"GO:0018032"}


id: PBO:0088265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase, class I/classII","termid":"PBO:0088265"}


id: PBO:0090631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein O-mannosyltransferase Ogm1","termid":"PBO:0090631"}


id: GO:0018942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organometals, any metal-containing organic compound, especially one in which the metal atom is linked directly to one of more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organometal metabolic process","synonyms":[{"name":"organometal metabolism","type":"exact"}],"termid":"GO:0018942"}


id: PBO:0089917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-spanning vacuolar membrane protease","termid":"PBO:0089917"}


id: PBO:0002092
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAs Like","termid":"PBO:0002092"}


id: MONDO:0009581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-dysmorphism-hypogonadism-diabetes mellitus syndrome is characterized by moderate intellectual deficit, craniofacial dysmorphism (including broad nose with coloboma of the alea nasi, deep-set eyes, prognathism), hypergonadotropic hypogonadism, eunuchoid habitus, type 1 diabetes mellitus, and epilepsy. It has been described in four patients (three brothers and their sister). This syndrome is probably transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:3044"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-dysmorphism-hypogonadism-diabetes mellitus syndrome","secondary_identifiers":["MEDGEN:343317","MESH:C537447","OMIM:249599","SCTID:722454003","GARD:9811","UMLS:C1855303"],"synonyms":[{"name":"Belgian type intellectual disability syndrome","type":"related"},{"name":"Belgian type mental retardation syndrome","type":"related"},{"name":"intellectual disability syndrome, Belgian type","type":"related"},{"name":"mental retardation syndrome, Belgian type","type":"related"}],"termid":"MONDO:0009581","xrefs":{"Monarch":{"xref_id":"0009581"}}}


id: PBO:0070941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 49","termid":"PBO:0070941"}


id: MONDO:0003051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic endometritis characterized by the presence of plasmacytic infiltrates in the endometrium. There are no granulomas present.","definition_xrefs":["NCIT:C27625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic endometritis","termid":"MONDO:0024279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non specific chronic endometritis","secondary_identifiers":["MEDGEN:235394","UMLS:C1335061","DOID:4560"],"synonyms":[{"name":"non specific chronic endometritis","type":"exact"}],"termid":"MONDO:0003051","xrefs":{"Monarch":{"xref_id":"0003051"}}}


id: GO:0048614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the post-embryonic phase, by which the anatomical structures of the ectodermal gut are generated and organized.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"ectodermal digestive tract morphogenesis","termid":"GO:0048567"},{"relation_name":"part_of","term_name":"post-embryonic ectodermal digestive tract development","termid":"GO:0048612"},{"relation_name":"part_of","term_name":"post-embryonic digestive tract morphogenesis","termid":"GO:0048621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic ectodermal digestive tract morphogenesis","synonyms":[{"name":"post-embryonic ectodermal gut morphogenesis","type":"related"}],"termid":"GO:0048614"}


id: GO:0010223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to secondary (or auxiliary or axillary) shoots in plants. This process pertains to the initial formation of a structure from unspecified parts. These secondary shoots originate from secondary meristems initiated in the axils of leaf primordia. Axillary meristems function like the shoot apical meristem of the primary shoot initiating the development of lateral organs.","definition_xrefs":["PMID:12815068","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"},{"relation_name":"is_a","term_name":"shoot axis formation","termid":"GO:0010346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary shoot formation","synonyms":[{"name":"auxiliary shoot formation","type":"related"},{"name":"axillary shoot formation","type":"related"},{"name":"axillary shoot system formation","type":"exact"},{"name":"shoot branching","type":"related"}],"termid":"GO:0010223"}


id: GO:0048070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigmentation","termid":"GO:0120305"},{"relation_name":"regulates","term_name":"developmental pigmentation","termid":"GO:0048066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of developmental pigmentation","synonyms":[{"name":"regulation of pigmentation during development","type":"exact"}],"termid":"GO:0048070"}


id: PBO:0050782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1F","termid":"PBO:0050782"}


id: PBO:0079362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 4a","termid":"PBO:0079362"}


id: PBO:0039542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 39","termid":"PBO:0039542"}


id: MONDO:0006460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital benign cyst arising from the remnants of the thyroglossal duct. It is usually located in the midline of the neck.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroglossal duct cyst","secondary_identifiers":["SCTID:39462005","ICD9:759.2","MESH:D013955","EFO:1000585","Orphanet:489","UMLS:C0040124","MEDGEN:11810"],"synonyms":[{"name":"thyroglossal tract cyst","type":"exact"}],"termid":"MONDO:0006460","xrefs":{"Monarch":{"xref_id":"0006460"}}}


id: PBO:0029976
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_dephosphorylation","termid":"PBO:0029976"}


id: GO:0018268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-glycine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a glycyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0161"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI anchor biosynthetic process via N-glycyl-glycosylphosphatidylinositolethanolamine (obsolete GO:0018268)","termid":"GO:0018268"}


id: GO:0019894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently and stoichiometrically with kinesin, a member of a superfamily of microtubule-based motor proteins that perform force-generating tasks such as organelle transport and chromosome segregation.","definition_xrefs":["GOC:curators","PMID:8606779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008092","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"kinesin binding","termid":"GO:0019894"}


id: PBO:0044308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase 3","termid":"PBO:0044308"}


id: MONDO:0004696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the larynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"},{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"larynx carcinoma in situ","secondary_identifiers":["MEDGEN:56336","SCTID:92634009","UMLS:C0154069","DOID:9011","ICD10CM:D02.0","NCIT:C9100","ICD9:231.0"],"synonyms":[{"name":"carcinoma in situ of larynx","type":"exact"},{"name":"carcinoma in situ of the larynx","type":"exact"},{"name":"laryngeal cancer stage 0","type":"exact"},{"name":"laryngeal carcinoma in situ","type":"exact"},{"name":"laryngeal carcinoma stage 0","type":"exact"},{"name":"larynx carcinoma in situ","type":"exact"},{"name":"larynx in situ carcinoma","type":"exact"},{"name":"stage 0 carcinoma of larynx","type":"exact"},{"name":"stage 0 carcinoma of the larynx","type":"exact"},{"name":"stage 0 laryngeal cancer","type":"exact"},{"name":"stage 0 laryngeal cancer aJCC v6","type":"exact"},{"name":"stage 0 laryngeal cancer aJCC v6, v7, and V8","type":"exact"},{"name":"stage 0 laryngeal cancer aJCC v7","type":"exact"},{"name":"stage 0 laryngeal cancer aJCC v8","type":"exact"},{"name":"stage 0 laryngeal carcinoma","type":"exact"},{"name":"stage 0 laryngeal carcinoma in situ","type":"exact"},{"name":"stage 0 laryngeal throat cancer","type":"exact"},{"name":"stage 0 larynx carcinoma","type":"exact"}],"termid":"MONDO:0004696","xrefs":{"Monarch":{"xref_id":"0004696"}}}


id: PR:O14045
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tpt1 gene.","definition_xrefs":["UniProtKB:O14045","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.12c","synonyms":[{"name":"Spom972h-tpt1","type":"exact"}],"termid":"PR:O14045"}


id: GO:1905092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diosgenin stimulus.","definition_xrefs":["GOC:bc","GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","PMID:25765596","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sterol","termid":"GO:0036314"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to triterpenoid","termid":"GO:1905836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diosgenin","termid":"GO:1905092"}


id: PBO:0091512
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"although the specificity is different Imt1/A4GALT are in equivalent pathway postitions","termid":"PBO:0091512"}


id: MONDO:0017664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic myoclonus (obsolete MONDO:0017664)","termid":"MONDO:0017664","xrefs":{"Monarch":{"xref_id":"0017664"}}}


id: PBO:0046255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 4","termid":"PBO:0046255"}


id: GO:0071545
data:
  {"annotated_genes":["SJAG_00244","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88502,114838],"is_not":false,"summary":null,"term":"GO:0071545"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"inositol phosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inositol phosphate breakdown","type":"exact"},{"name":"inositol phosphate catabolism","type":"exact"},{"name":"inositol phosphate degradation","type":"exact"},{"name":"myo-inositol phosphate catabolic process","type":"narrow"}],"termid":"GO:0071545","terms_by_termid":{"GO:0071545":null}}


id: MONDO:0011512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brooke-Spiegler syndrome (BSS) is an inherited predisposition syndrome presenting with skin appendage tumors, namely cylindromas, spiradenomas and trichoepitheliomas. A minority of patients can also get major and minor salivary glands neoplasms, usually membranous basal cell adenoma.","definition_xrefs":["Orphanet:79493"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Brooke-Spiegler syndrome","secondary_identifiers":["DOID:0050693","UMLS:C1857941","ICD9:239.2","SCTID:703531009","MEDGEN:346703","GARD:10179","NCIT:C205541","OMIM:605041"],"synonyms":[{"name":"BRSS","type":"related"},{"name":"Brooke-Spiegler syndrome","type":"exact"},{"name":"Bss","type":"related"},{"name":"CYLD cutaneous syndrome","type":"exact"},{"name":"Spiegler-Brooke syndrome","type":"related"}],"termid":"MONDO:0011512","xrefs":{"Monarch":{"xref_id":"0011512"}}}


id: PBO:0025508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa6 (predicted)","termid":"PBO:0025508"}


id: PBO:0091126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein family with conserved tryptophans cysteines and tyrosines","termid":"PBO:0091126"}


id: FYPO:0006702
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of adenine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular adenine level","synonyms":[{"name":"decreased cellular adenine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular adenine level during vegetative growth","type":"exact"},{"name":"reduced cellular adenine level","type":"exact"}],"termid":"FYPO:0006702"}


id: PBO:0044775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 56","termid":"PBO:0044775"}


id: MONDO:0018616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central serous chorioretinopathy is a disease that causes fluid to build up under the retina, the back part of the inner eye that sends sight information to the brain. The fluid leaks from thechoroid (theblood vessel layer under the retina). The cause of this condition is unknown but stress can be a risk factor. Signs and symptoms include dim and blurred blind spot in the center of vision, distortion of straight linesand seeingobjectsas smaller or farther away. Many cases of central serous chorioretinopathy improve without treatment after 1-2 months. Laser treatment may be an option for other individuals.","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"central serous chorioretinopathy","secondary_identifiers":["MEDGEN:147591","NCIT:C115124","ICD9:362.41","UMLS:C0730328","Orphanet:443079","icd11.foundation:1623925689","GARD:200","MESH:D056833","SCTID:312956001"],"synonyms":[{"name":"CSC","type":"exact"},{"name":"CSCR","type":"exact"},{"name":"central serous chorioretinopathy after bone marrow transplantation","type":"related"},{"name":"central serous choroidopathy","type":"related"},{"name":"central serous retinopathy","type":"exact"}],"termid":"MONDO:0018616","xrefs":{"Monarch":{"xref_id":"0018616"}}}


id: GO:0090166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of a Golgi apparatus that contributes to Golgi inheritance.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi organization","termid":"GO:0007030"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"},{"relation_name":"part_of","term_name":"Golgi inheritance","termid":"GO:0048313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Golgi disassembly","synonyms":[{"name":"Golgi apparatus disassembly","type":"exact"}],"termid":"GO:0090166"}


id: PBO:0090036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3844 family transmembrane protein, conserved in fungi","termid":"PBO:0090036"}


id: MONDO:0004952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hodgkin lymphoma (HL) is a heterogeneous group of malignant lymphoid neoplasms of B-cell origin characterized histologically by the presence of Hodgkin and Reed-Sternberg (HRS) cells in the vast majority of cases. There are two distinct subtypes: nodular lymphocyte predominant Hodgkin lymphoma and classical Hodgkin lymphoma. Hodgkin lymphoma involves primarily lymph nodes.","definition_xrefs":["NCIT:C9357","Orphanet:98293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","termid":"MONDO:0017343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Hodgkins lymphoma","secondary_identifiers":["icd11.foundation:1528863768","EFO:0000183","ICD9:201.1","NANDO:2200024","NORD:1246","ONCOTREE:HL","ICD9:201.0","ICDO:9650/3","DOID:8567","GARD:2714","MESH:D006689","ICD9:201.90","ICD9:201.9","ICD9:201","ICD9:201.2"],"synonyms":[{"name":"HL","type":"exact"},{"name":"Hodgkin disease","type":"exact"},{"name":"Hodgkin lymphoma","type":"exact"},{"name":"Hodgkin's Disease","type":"exact"},{"name":"Hodgkin's disease","type":"exact"},{"name":"Hodgkin's lymphoma","type":"exact"},{"name":"Hodgkin's sarcoma","type":"related"},{"name":"Hodgkins lymphoma","type":"exact"},{"name":"lymphoma, Hodgkin's","type":"related"},{"name":"stage I subdiaphragmatic Hodgkin lymphoma","type":"narrow"},{"name":"stage II subdiaphragmatic Hodgkin lymphoma","type":"narrow"}],"termid":"MONDO:0004952","xrefs":{"Monarch":{"xref_id":"0004952"}}}


id: MONDO:0004857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of a tendon, usually resulting from an overuse injury. It is characterized by swelling of the tendon, tenderness around the inflamed tendon, and pain while moving the affected area of the body.","definition_xrefs":["NCIT:C97141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"},{"relation_name":"is_a","term_name":"disease of the tendon","termid":"MONDO:0100010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"tendinitis","secondary_identifiers":["UMLS:C0039503","DOID:971","MEDGEN:21094","SCTID:34840004"],"synonyms":[{"name":"inflammation of tendon","type":"exact"},{"name":"tendon inflammation","type":"exact"},{"name":"tendonitis","type":"exact"}],"termid":"MONDO:0004857","xrefs":{"Monarch":{"xref_id":"0004857"}}}


id: GO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A large multisubunit protease found in the cytosol that recognizes, unfolds, and digests protein substrates that have been marked for degradation by the attachment of a ubiquitin group. Individual subcomplexes of the complete 26S proteasome are involved in these different tasks: the ATP-dependent 19S caps are believed to unfold substrates and feed them to the actual protease, the 20S proteasome.","definition_xrefs":["PMID:10410804"],"gene_count":0,"genotype_count":0,"name":"obsolete 26S proteasome (obsolete GO:0005837)","synonyms":[{"name":"26S proteasome","type":"exact"}],"termid":"GO:0005837"}


id: MOD:01412
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a dihydroxylated leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated leucine","termid":"MOD:01410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxylated leucine","synonyms":[{"name":"Hy2Leu","type":"exact"}],"termid":"MOD:01412"}


id: PBO:0080767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xin actin binding repeat containing 2","termid":"PBO:0080767"}


id: MONDO:0006711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heart disorder in which the pericardial sac becomes thickened and fibrotic, tightening the myocardium and impeding the normal myocardial function.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericarditis","termid":"MONDO:0005904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"constrictive pericarditis","secondary_identifiers":["MedDRA:10010783","MESH:D010494","DOID:11481","NANDO:2200239","HP:0002563","icd11.foundation:1722995229","MEDGEN:18378","NANDO:2100064","NCIT:C78246","EFO:1000878","ICD9:423.2","SCTID:85598007","UMLS:C0031048"],"synonyms":[{"name":"constrictive pericarditis","type":"exact"},{"name":"constrictive pericarditis (disease)","type":"exact"}],"termid":"MONDO:0006711","xrefs":{"Monarch":{"xref_id":"0006711"}}}


id: GO:0034276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of kynurenic acid, 4-hydroxyquinoline-2-carboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kynurenic acid metabolic process","termid":"GO:0034275"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"kynurenic acid biosynthetic process","synonyms":[{"name":"4-hydroxyquinoline-2-carboxylic acid biosynthetic process","type":"exact"},{"name":"kynurenic acid anabolism","type":"exact"},{"name":"kynurenic acid biosynthesis","type":"exact"},{"name":"kynurenic acid formation","type":"related"},{"name":"kynurenic acid synthesis","type":"exact"}],"termid":"GO:0034276"}


id: PBO:0077484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 203","termid":"PBO:0077484"}


id: MONDO:0009642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oral-facial-digital (OFD) type 2 is characterized by hand and feet deformities, facial deformities, midline cleft of the upper lip and tongue hamartomas.","definition_xrefs":["Orphanet:2751"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"},{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome type II","secondary_identifiers":["GARD:3701","OMIM:252100","UMLS:C0026363","MEDGEN:10077","ICD9:759.89","SCTID:1779005","DOID:0060959"],"synonyms":[{"name":"MOHR syndrome","type":"exact"},{"name":"Mohr syndrome","type":"exact"},{"name":"OFD syndrome 2","type":"related"},{"name":"OFD2","type":"exact"},{"name":"Ofds 2","type":"related"},{"name":"oral facial digital syndrome 2","type":"related"},{"name":"oral facial digital syndrome type 2","type":"related"},{"name":"oral-Facial-digital syndrome, type 2","type":"related"},{"name":"oral-facial-digital syndrome type 2","type":"exact"},{"name":"orofaciodigital syndrome 2","type":"related"},{"name":"orofaciodigital syndrome II","type":"related"},{"name":"orofaciodigital syndrome type 2","type":"related"}],"termid":"MONDO:0009642","xrefs":{"Monarch":{"xref_id":"0009642"}}}


id: SO:0001728
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein may be dimethylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K9_methylation_site","termid":"SO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_dimethylation_site","synonyms":[{"name":"H3K9 di-methylation site","type":"exact"},{"name":"H3K9Me2","type":"related"}],"termid":"SO:0001728"}


id: MONDO:0014242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any van Maldergem syndrome in which the cause of the disease is a mutation in the FAT4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"van Maldergem syndrome","termid":"MONDO:0017813"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van Maldergem syndrome 2","secondary_identifiers":["MEDGEN:816205","UMLS:C3809875","GARD:15984","OMIM:615546","DOID:0080586"],"synonyms":[{"name":"FAT4 van Maldergem syndrome","type":"exact"},{"name":"VAN Maldergem syndrome 2","type":"related"},{"name":"VMLDS2","type":"related"},{"name":"Van Maldergem syndrome type 2","type":"exact"},{"name":"van Maldergem syndrome 2","type":"exact"},{"name":"van Maldergem syndrome caused by mutation in FAT4","type":"exact"}],"termid":"MONDO:0014242","xrefs":{"Monarch":{"xref_id":"0014242"}}}


id: GO:0032526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to retinoic acid","synonyms":[{"name":"response to vitamin A acid","type":"exact"}],"termid":"GO:0032526"}


id: PBO:0052348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 3A pseudogene 1","termid":"PBO:0052348"}


id: PBO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GDA1","termid":"PBO:0001129"}


id: PBO:0059968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 13","termid":"PBO:0059968"}


id: GO:0044142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the symbiont's increase in size or mass on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont on or near host surface (obsolete GO:0044142)","termid":"GO:0044142"}


id: MONDO:0001636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"mechanical entropion","secondary_identifiers":["MEDGEN:509838","ICD9:374.02","DOID:13112","SCTID:38683003","UMLS:C0155189"],"termid":"MONDO:0001636","xrefs":{"Monarch":{"xref_id":"0001636"}}}


id: GO:0002297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper 2 cell, a CD4-positive, alpha-beta T cell specialized to promote immunological processes often associated with resistance to extracellular organisms such as helminths, enhanced production of particular antibody isotypes, and pathological conditions such as allergy.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell lineage commitment","termid":"GO:0002295"},{"relation_name":"part_of","term_name":"T-helper 2 cell differentiation","termid":"GO:0045064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 2 cell lineage commitment","synonyms":[{"name":"T-helper 2 cell fate commitment","type":"exact"},{"name":"Th2 fate commitment","type":"exact"}],"termid":"GO:0002297"}


id: PBO:0090967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-adenosyl)-triphosphatase Nit1","termid":"PBO:0090967"}


id: PBO:0054775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2188","termid":"PBO:0054775"}


id: PBO:0005173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair endonuclease XPF","termid":"PBO:0005173"}


id: MONDO:0021048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized mast cell neoplasm without metastatic potential.","definition_xrefs":["NCIT:C3217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mastocytoma","termid":"MONDO:0003079"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"benign mastocytoma","secondary_identifiers":["MEDGEN:384518","DOID:4658","UMLS:C2242987"],"synonyms":[{"name":"MAST cell tumor, benign","type":"exact"},{"name":"benign mastocytoma","type":"exact"},{"name":"mastocytoma, benign","type":"exact"}],"termid":"MONDO:0021048","xrefs":{"Monarch":{"xref_id":"0021048"}}}


id: PBO:0071246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 87","termid":"PBO:0071246"}


id: GO:1905586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of outer hair cell apoptotic process.","definition_xrefs":["GOC:TermGenie","PMID:24472721","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"regulation of outer hair cell apoptotic process","termid":"GO:1905585"},{"relation_name":"negatively_regulates","term_name":"outer hair cell apoptotic process","termid":"GO:1905584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of outer hair cell apoptotic process","synonyms":[{"name":"down regulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"down regulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"down regulation of outer hair cell apoptosis","type":"narrow"},{"name":"down regulation of outer hair cell apoptotic process","type":"exact"},{"name":"down-regulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"down-regulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"down-regulation of outer hair cell apoptosis","type":"narrow"},{"name":"down-regulation of outer hair cell apoptotic process","type":"exact"},{"name":"downregulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"downregulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"downregulation of outer hair cell apoptosis","type":"narrow"},{"name":"downregulation of outer hair cell apoptotic process","type":"exact"},{"name":"inhibition of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"inhibition of cochlear outer hair cell apoptotic process","type":"narrow"},{"name":"inhibition of outer hair cell apoptosis","type":"narrow"},{"name":"inhibition of outer hair cell apoptotic process","type":"narrow"},{"name":"negative regulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"negative regulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"negative regulation of outer hair cell apoptosis","type":"narrow"}],"termid":"GO:1905586"}


id: MONDO:0100290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The presence of multiple serrated polyps in the colon. The polyps are predominantly sessile serrated adenomas/polyps. A minority of the polyps are microvesicular variants of hyperplastic polyps. According to some authors, the polyps are proximal to the sigmoid colon. According to others, the polyps are distributed throughout the entire colon.","definition_xrefs":["NCIT:C96470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplastic polyposis syndrome","termid":"MONDO:0015524"},{"relation_name":"is_a","term_name":"polyp of colon","termid":"MONDO:0021400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colon serrated polyposis","secondary_identifiers":["UMLS:C3272797","MEDGEN:474430"],"termid":"MONDO:0100290","xrefs":{"Monarch":{"xref_id":"0100290"}}}


id: GO:0061614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular synthesis of microRNA (miRNA) transcripts. MicroRNA genes are synthesized as primary (pri) miRNA transcripts and subsequently processed to produce the ~22nt miRNAs that function in gene regulation.","definition_xrefs":["PMID:18778799","GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"miRNA metabolic process","termid":"GO:0010586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"miRNA transcription","synonyms":[{"name":"miRNA gene transcription","type":"exact"},{"name":"microRNA gene transcription","type":"exact"},{"name":"pri-miRNA transcription by RNA polymerase II","type":"exact"},{"name":"pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"primary miRNA gene transcription","type":"exact"}],"termid":"GO:0061614"}


id: MONDO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Ohtahara syndrome (obsolete MONDO:0000418)","termid":"MONDO:0000418","xrefs":{"Monarch":{"xref_id":"0000418"}}}


id: PBO:0068822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 60, pseudogene","termid":"PBO:0068822"}


id: MONDO:0009939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonic stenosis and congenital nephrosis","secondary_identifiers":["UMLS:C0403552","MEDGEN:96044","OMIM:265600","MESH:C562895","SCTID:236530006"],"synonyms":[{"name":"pulmonic stenosis and congenital nephrosis","type":"exact"}],"termid":"MONDO:0009939","xrefs":{"Monarch":{"xref_id":"0009939"}}}


id: PBO:0116581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR89 family, implicated in ribosome biogenesis","termid":"PBO:0116581"}


id: SO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group of loci that can be grouped in a linear order representing the different degrees of linkage among the genes concerned.","definition_xrefs":["ISBN:038752046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linkage_group","secondary_identifiers":["http://en.wikipedia.org/wiki/Linkage_group"],"synonyms":[{"name":"linkage group","type":"exact"}],"termid":"SO:0000018"}


id: MONDO:0005355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent narrowing or constriction of a coronary artery following surgical procedures performed to alleviate a prior obstruction.","definition_xrefs":["MESH:D023903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary stenosis","termid":"MONDO:0006715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"coronary restenosis","secondary_identifiers":["EFO:0004224","DOID:4247","UMLS:C0948480","MEDGEN:182688"],"termid":"MONDO:0005355","xrefs":{"Monarch":{"xref_id":"0005355"}}}


id: PBO:0075684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid receptor associated and regulated protein","termid":"PBO:0075684"}


id: PBO:0031596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_telophase","termid":"PBO:0031596"}


id: PBO:0060878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEMP2 divergent transcript","termid":"PBO:0060878"}


id: PBO:0003443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial peptidase (predicted)","termid":"PBO:0003443"}


id: PBO:0073938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 18 member A1","termid":"PBO:0073938"}


id: MOD:01532
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01532"}


id: PBO:0066345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2 pseudogene 7","termid":"PBO:0066345"}


id: GO:0030198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular structure organization","termid":"GO:0043062"},{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extracellular matrix organization","secondary_identifiers":["Reactome:R-HSA-1474244"],"synonyms":[{"name":"extracellular matrix organisation","type":"exact"},{"name":"extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:0030198"}


id: MONDO:0006674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare neoplasm, usually benign, derived from mesenchymal fibroblasts located in the submesothelial lining of the PLEURA. It spite of its various synonyms, it has no features of mesothelial cells and is not related to malignant MESOTHELIOMA or asbestos exposure.","definition_xrefs":["EFO:1000835"],"gene_count":0,"genotype_count":0,"name":"obsolete benign fibrous mesothelioma (obsolete MONDO:0006674)","secondary_identifiers":["SCTID:254646001","NCIT:C4457","DOID:2653","MESH:D054363"],"synonyms":[{"name":"fibrous mesothelioma, benign","type":"exact"},{"name":"fibrous mesothelioma, benign (morphologic abnormality)","type":"exact"},{"name":"localized benign fibrous mesothelioma","type":"exact"},{"name":"solitary fibrous tumor, pleural","type":"related"}],"termid":"MONDO:0006674","xrefs":{"Monarch":{"xref_id":"0006674"}}}


id: MONDO:0054780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary elliptocytosis","termid":"MONDO:0017319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"elliptocytosis 3","secondary_identifiers":["OMIM:617948","MEDGEN:357139","UMLS:C1866810","GARD:16273","MESH:C566678"],"synonyms":[{"name":"EL3","type":"related"},{"name":"anemia, neonatal hemolytic, fatal or near-fatal","type":"exact"},{"name":"anemia, perinatal hemolytic, fatal or near-fatal","type":"related"},{"name":"elliptocytosis 3","type":"exact"},{"name":"elliptocytosis-3","type":"exact"}],"termid":"MONDO:0054780","xrefs":{"Monarch":{"xref_id":"0054780"}}}


id: PBO:0002642
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.10","termid":"PBO:0002642"}


id: PBO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methylsterol oxidase (predicted)","termid":"PBO:0000308"}


id: FYPO:0008113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which introns are retained at some, but not all introns at a higher level with increased frequency. Weak donor sequences are more affected.","definition_xrefs":["PMID:37403782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome, intron-specific","termid":"FYPO:0003244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0000294","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased intron retention","termid":"FYPO:0008113"}


id: MONDO:0018391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility with spermatogenesis disorder (obsolete MONDO:0018391)","secondary_identifiers":["Orphanet:399775"],"termid":"MONDO:0018391","xrefs":{"Monarch":{"xref_id":"0018391"}}}


id: GO:0047950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glutathione + O2 = glutathione disulfide + H2O2.","definition_xrefs":["EC:1.8.3.3","RHEA:24112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glutathione oxidase activity","secondary_identifiers":["KEGG_REACTION:R00120","MetaCyc:GLUTATHIONE-OXIDASE-RXN"],"synonyms":[{"name":"glutathione:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047950"}


id: MONDO:0031007
data:
  {"annotated_genes":["SJAG_02889"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85378],"is_not":false,"summary":null,"term":"MONDO:0031007"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"NMNAT1-related retinopathy","termid":"MONDO:0800101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia, sensorineural hearing loss, impaired intellectual development, and leber congenital amaurosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:611207","DOID:0112290","GARD:18025","MEDGEN:1780157","OMIM:619260","UMLS:C5543257"],"synonyms":[{"name":"SHILCA","type":"exact"},{"name":"SHILCA syndrome","type":"exact"},{"name":"spondyloepiphyseal dysplasia, sensorineural hearing loss, intellectual developmental disorder, and Leber congenital amaurosis","type":"exact"}],"termid":"MONDO:0031007","terms_by_termid":{"MONDO:0031007":null},"xrefs":{"Monarch":{"xref_id":"0031007"}}}


id: PBO:0060653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 2","termid":"PBO:0060653"}


id: PBO:0041721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyon neuron specific vesicular protein","termid":"PBO:0041721"}


id: PBO:0071732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 30","termid":"PBO:0071732"}


id: PR:000050549
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe) that has not been phosphorylated at positions equivalent to Ser-3, Ser-24, Ser-31, Thr-55, Thr-64, Ser-67, Ser-97, Ser-136, and Thr-214 of the amino acid sequence represented by UniProtKB:O74398. Example: UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Thr-55/Thr-64/Ser-67/Ser-97/Ser-136/Thr-214, PR:000026291.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:34133210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe)","termid":"PR:000050547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pxl1/UnPhos:(S3,S24,S31,T55,T64,S67,S97,S136,T214)","pombase_gene_id":"SPBC4F6.12","synonyms":[{"name":"PomBase_original_PRO_term_name: LIM domain-containing protein C4F6.12 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-pxl1/UnPhos:1","type":"exact"},{"name":"UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Thr-55/Thr-64/Ser-67/Ser-97/Ser-136/Thr-214, PR:000026291","type":"narrow"},{"name":"pxl1/UnPhos:(S3,S24,S31,T55,T64,S67,S97,S136,T214)","type":"exact"}],"termid":"PR:000050549"}


id: PBO:0005527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicer","termid":"PBO:0005527"}


id: GO:0051349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lyase activity, the catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lyase activity","synonyms":[{"name":"activation of lyase activity","type":"narrow"},{"name":"lyase activator","type":"exact"},{"name":"stimulation of lyase activity","type":"narrow"},{"name":"up regulation of lyase activity","type":"exact"},{"name":"up-regulation of lyase activity","type":"exact"},{"name":"upregulation of lyase activity","type":"exact"}],"termid":"GO:0051349"}


id: PR:O59679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A rho guanine nucleotide exchange factor 38 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03117","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho guanine nucleotide exchange factor gef3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.17","secondary_identifiers":["UniProtKB:O59679"],"synonyms":[{"name":"Spom972h-ARHGEF38","type":"exact"}],"termid":"PR:O59679"}


id: GO:0070617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of vitamin metabolic process","termid":"GO:0046137"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of thiamine diphosphate biosynthetic process","termid":"GO:0070616"},{"relation_name":"negatively_regulates","term_name":"thiamine diphosphate biosynthetic process","termid":"GO:0009229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"negative regulation of thiamine diphosphate biosynthetic process","synonyms":[{"name":"down regulation of thiamine diphosphate biosynthetic process","type":"exact"},{"name":"down-regulation of thiamine diphosphate biosynthetic process","type":"exact"},{"name":"downregulation of thiamine diphosphate biosynthetic process","type":"exact"},{"name":"inhibition of thiamine diphosphate biosynthetic process","type":"narrow"},{"name":"negative regulation of thiamin diphosphate biosynthetic process","type":"exact"},{"name":"negative regulation of thiamine diphosphate anabolism","type":"exact"},{"name":"negative regulation of thiamine diphosphate biosynthesis","type":"exact"},{"name":"negative regulation of thiamine diphosphate formation","type":"exact"},{"name":"negative regulation of thiamine diphosphate synthesis","type":"exact"}],"termid":"GO:0070617"}


id: PBO:0039644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 subunit beta 1","termid":"PBO:0039644"}


id: PBO:0090321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Rrp6","termid":"PBO:0090321"}


id: GO:0048395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intermediate mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"intermediate mesodermal cell fate determination","termid":"GO:0048394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intermediate mesodermal cell fate determination","termid":"GO:0048395"}


id: PBO:0080341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 105 pseudogene","termid":"PBO:0080341"}


id: PBO:0071500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 3","termid":"PBO:0071500"}


id: GO:0071031
data:
  {"annotated_genes":["SJAG_02622","SJAG_03984","SJAG_03179","SJAG_04006","SJAG_00961"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70018,74397,93244,97041,117909],"is_not":false,"summary":null,"term":"GO:0071031"}]},"cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading mRNAs with incorrectly formed 3'-ends within the nucleus.","definition_xrefs":["PMID:18644474","GOC:krc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear mRNA surveillance","termid":"GO:0071028"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00961":null,"SJAG_02622":null,"SJAG_03179":null,"SJAG_03984":null,"SJAG_04006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"nuclear mRNA surveillance of mRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear mRNA catabolic process of mRNA with aberrant 3'-ends","type":"exact"},{"name":"nuclear mRNA quality control of mRNAs with aberrant 3'-ends","type":"exact"}],"termid":"GO:0071031","terms_by_termid":{"GO:0071031":null}}


id: MOD:01529
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["Unimod:730#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01529"}


id: PBO:0084795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein involved in assembly of succinate dehydrogenase; has a role in maturation of the Sdh2p subunit; member of the LYR protein family; mutations in human ortholog SDHAF1 are associated with infantile leukoencephalopathy","termid":"PBO:0084795"}


id: MONDO:0004754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Protrusion of the rectum through the anus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal disorder","termid":"MONDO:0001593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal prolapse","secondary_identifiers":["icd11.foundation:231914102","UMLS:C0034888","MEDGEN:11151","MESH:D012005","HP:0002035","ICD9:569.1","NCIT:C34973","DOID:9307","ICD10CM:K62.3"],"synonyms":[{"name":"procidentia, rectum","type":"exact"},{"name":"rectal prolapse","type":"exact"},{"name":"rectal prolapse (disease)","type":"exact"}],"termid":"MONDO:0004754","xrefs":{"Monarch":{"xref_id":"0004754"}}}


id: PBO:0083457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene HSF1; null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2","termid":"PBO:0083457"}


id: PBO:0045210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C5","termid":"PBO:0045210"}


id: PBO:0073689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 2","termid":"PBO:0073689"}


id: PBO:0065116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCI pseudogene 1","termid":"PBO:0065116"}


id: GO:0102036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a tetrahydrofolate + a [methyl-Co(III) corrinoid Fe-S protein] = an N5-methyl-tetrahydrofolate + a [Co(I) corrinoid Fe-S protein].","definition_xrefs":["PMID:7928975","EC:2.1.1.258","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase activity","secondary_identifiers":["MetaCyc:METHCOCLTH-RXN","RHEA:45200"],"termid":"GO:0102036"}


id: GO:0071867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monoamine stimulus. A monoamine is any of a group of molecular messengers that contain one amino group that is connected to an aromatic ring by ethylene group (-CH2-CH2-). Monoamines are derived from the aromatic amino acids phenylalanine, tyrosine, histidine and tryptophan.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to monoamine","synonyms":[{"name":"response to monoamine stimulus","type":"exact"}],"termid":"GO:0071867"}


id: GO:0090668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an endothelial cell in response to the presence of vascular endothelial growth factor (VEGF).","definition_xrefs":["GOC:BHF","GOC:rph","GOC:BHF_miRNA","PMID:21885851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis to vascular endothelial growth factor","termid":"GO:0090667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:0090668"}


id: FYPO:0005346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is abolished, and the protein is instead present in the nucleus, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:9635190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to cytoplasm, with protein mislocalized to nucleus during mitotic interphase","synonyms":[{"name":"abolished protein localisation to cytoplasm, with protein mislocalised to nucleus during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cytoplasm, with protein mislocalized to nucleus during interphase during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cytoplasm, with protein mislocalized to nucleus during mitotic interphase during vegetative growth","type":"exact"},{"name":"protein localization to cytoplasm abolished, with protein mislocalized to nucleus during mitotic interphase","type":"exact"}],"termid":"FYPO:0005346"}


id: MONDO:0800350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 4","secondary_identifiers":["MEDGEN:462032","UMLS:C3150682"],"synonyms":[{"name":"LVNC4","type":"exact"}],"termid":"MONDO:0800350","xrefs":{"Monarch":{"xref_id":"0800350"}}}


id: PBO:0083309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps HMLALPHA1","termid":"PBO:0083309"}


id: GO:0033525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ester derivates of sinapate, (2E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"sinapate ester metabolic process","termid":"GO:0033524"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"sinapate ester biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3301"],"synonyms":[{"name":"sinapate ester anabolism","type":"exact"},{"name":"sinapate ester biosynthesis","type":"exact"},{"name":"sinapate ester formation","type":"exact"},{"name":"sinapate ester synthesis","type":"exact"}],"termid":"GO:0033525"}


id: GO:0009763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of C4 photosynthesis, as it occurs in plants in which the enzyme decarboxylating C4 acids in the bundle sheath is NAD-malic enzyme.","definition_xrefs":["PMID:11788762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4 photosynthesis","termid":"GO:0009760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"NAD-malic enzyme C4 photosynthesis","termid":"GO:0009763"}


id: MONDO:0009995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rheumatic fever-related antigen (obsolete MONDO:0009995)","secondary_identifiers":["OMIM:268240"],"synonyms":[{"name":"rheumatic fever, acute, susceptibility to","type":"related"},{"name":"rheumatic fever-related antigen","type":"exact"}],"termid":"MONDO:0009995","xrefs":{"Monarch":{"xref_id":"0009995"}}}


id: MONDO:0017486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"radial hemimelia","termid":"MONDO:0019671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"radial hemimelia, unilateral","secondary_identifiers":["icd11.foundation:1956537587","Orphanet:295069"],"synonyms":[{"name":"radial longitidinal meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017486","xrefs":{"Monarch":{"xref_id":"0017486"}}}


id: GO:0102489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + 2 H2O = GMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete GTP phosphohydrolase activity (obsolete GO:0102489)","termid":"GO:0102489"}


id: GO:1903676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cap-dependent translational initiation.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:TermGenie","GOC:bf","PMID:11959995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cap-dependent translational initiation","termid":"GO:1903674"},{"relation_name":"is_a","term_name":"positive regulation of cytoplasmic translational initiation","termid":"GO:1904690"},{"relation_name":"positively_regulates","term_name":"cap-dependent translational initiation","termid":"GO:0002191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0002181","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cap-dependent translational initiation","synonyms":[{"name":"activation of cap-dependent translational initiation","type":"narrow"},{"name":"up regulation of cap-dependent translational initiation","type":"exact"},{"name":"up-regulation of cap-dependent translational initiation","type":"exact"},{"name":"upregulation of cap-dependent translational initiation","type":"exact"}],"termid":"GO:1903676"}


id: GO:0010869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency or rate of receptor biosynthesis. Receptor biosynthesis is the collection of chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of receptor biosynthetic process (obsolete GO:0010869)","termid":"GO:0010869"}


id: PBO:0027415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027415"}


id: FYPO:0002415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and has an abnormal shape and a larger volume than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen vegetative cell","termid":"FYPO:0002414"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable swollen vegetative cell with abnormal cell shape","synonyms":[{"name":"inviable enlarged vegetative cell with abnormal cell shape","type":"related"},{"name":"inviable large vegetative cell with abnormal cell shape","type":"related"},{"name":"inviable swollen cell with abnormal cell shape during vegetative growth","type":"exact"},{"name":"inviable swollen misshapen vegetative cell","type":"related"},{"name":"inviable swollen vegetative cell with abnormal cell shape during mitotic cell cycle","type":"related"},{"name":"inviable vegetative cell with increased cell size and abnormal cell shape","type":"related"},{"name":"inviable vegetative cell with increased cell volume and abnormal cell shape","type":"exact"},{"name":"lethal; swollen vegetative cell with abnormal cell shape","type":"exact"}],"termid":"FYPO:0002415"}


id: PBO:0044189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsinogen B2","termid":"PBO:0044189"}


id: PBO:0058870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9902-2","termid":"PBO:0058870"}


id: MONDO:0010337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual deficit-cerebellar hypoplasia, also known as OPHN1 syndrome, is a rare syndromic form of cerebellar dysgenesis characterized by moderate to severe intellectual deficit and cerebellar abnormalities.","definition_xrefs":["Orphanet:137831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"X-linked intellectual disability-cerebellar hypoplasia syndrome","secondary_identifiers":["OMIM:300486","MEDGEN:336920","UMLS:C1845366","SCTID:719136005","DOID:0080311","GARD:9947","MESH:C537456"],"synonyms":[{"name":"MRX60 (formerly)","type":"related"},{"name":"OPHN1 XLMR","type":"related"},{"name":"OPHN1 XLMR, X-linked intellectual disability","type":"related"},{"name":"OPHN1 deficiency","type":"related"},{"name":"OPHN1 syndrome","type":"exact"},{"name":"OPHN1- related XLID","type":"related"},{"name":"Oligophrenin-1 syndrome","type":"exact"},{"name":"X-linked intellectual Deficit with cerebellar Hypoplasia","type":"related"},{"name":"X-linked intellectual disability-cerebellar hypoplasia syndrome","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic, Billuart type, X-linked recessive","type":"exact"},{"name":"intellectual disability X-linked 60 (formerly)","type":"related"},{"name":"intellectual disability X-linked with cerebellar hypoplasia and distinctive facial appearance","type":"related"},{"name":"intellectual disability, X-linked 60","type":"related"},{"name":"intellectual disability, X-linked 60, formerly","type":"related"},{"name":"intellectual disability, X-linked, with cerebellar hypoplasia and distinctive facial appearance","type":"related"},{"name":"mental retardation X-linked 60 (formerly)","type":"related"},{"name":"mental retardation X-linked with cerebellar hypoplasia and distinctive facial appearance","type":"related"},{"name":"mental retardation, X-linked 60","type":"related"},{"name":"mental retardation, X-linked 60, formerly","type":"related"},{"name":"mental retardation, X-linked, with cerebellar hypoplasia and distinctive facial appearance","type":"related"}],"termid":"MONDO:0010337","xrefs":{"Monarch":{"xref_id":"0010337"}}}


id: MONDO:0018023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"},{"relation_name":"is_a","term_name":"hereditary methemoglobinemia","termid":"MONDO:0018963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemoglobin M disease","secondary_identifiers":["Orphanet:330041","GARD:13007","SCTID:74912001","UMLS:C3665425","MESH:C581942","OMIM:617971","MEDGEN:777099"],"synonyms":[{"name":"M hemoglobinopathy","type":"exact"},{"name":"autosomal dominant methemoglobinemia","type":"related"},{"name":"blue baby syndrome","type":"related"},{"name":"hereditary methemoglobinemia due to haemoglobin mutation","type":"related"},{"name":"hereditary methemoglobinemia due to hemoglobin mutation","type":"related"},{"name":"methemoglobinemia, beta type","type":"exact"},{"name":"methemoglobinemia, beta-globin type","type":"related"}],"termid":"MONDO:0018023","xrefs":{"Monarch":{"xref_id":"0018023"}}}


id: PBO:0004918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32","termid":"PBO:0004918"}


id: PR:O59771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UMP-CMP kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04532","PANTHER:PTHR23359:SF23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.05c","secondary_identifiers":["UniProtKB:O59771"],"synonyms":[{"name":"ATP:UMP phosphotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CMPK1","type":"exact"},{"name":"UK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UMPK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dCMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"deoxycytidylate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"uridine monophosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59771"}


id: PR:O94602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.15c gene.","definition_xrefs":["UniProtKB:O94602","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C622.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.15c","synonyms":[{"name":"Spom972h-SPCC622.15c","type":"exact"}],"termid":"PR:O94602"}


id: PBO:0076057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin like 3","termid":"PBO:0076057"}


id: GO:1903104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of insulin receptor signaling pathway involved in determination of adult lifespan.","definition_xrefs":["PMID:19853560","GOC:TermGenie","GO_REF:0000058","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of insulin receptor signaling pathway involved in determination of adult lifespan (obsolete GO:1903104)","synonyms":[{"name":"regulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"regulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"regulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"}],"termid":"GO:1903104"}


id: FYPO:0000618
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119214,119215,119216],"is_not":false,"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through anaphase of mitosis is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic anaphase progression","termid":"FYPO:0000616"},{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of mitotic anaphase","references_by_uniquename":{"PMID:23786411":null},"secondary_identifiers":["FYPO:0000617"],"single_locus_annotated_genes":["SJAG_03575","SJAG_01956","SJAG_03351"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"delayed mitotic anaphase progression","type":"related"},{"name":"increased duration of anaphase during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic anaphase during vegetative growth","type":"exact"},{"name":"increased duration of mitotic anaphase progression","type":"exact"},{"name":"mitotic cell cycle progression in anaphase: delayed","type":"related"},{"name":"mitotic cell cycle progression in anaphase: increased duration","type":"related"},{"name":"prolonged mitotic anaphase","type":"exact"}],"termid":"FYPO:0000618","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: FYPO:0000728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch organization","termid":"FYPO:0000790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0004803","FYPO:0001320"],"is_obsolete":false,"name":"abnormal actin cortical patch assembly","synonyms":[{"name":"abnormal F-actin patch assembly","type":"exact"},{"name":"abnormal actin cortical patch assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch assembly during vegetative growth","type":"exact"},{"name":"abnormal actin patch assembly","type":"exact"}],"termid":"FYPO:0000728"}


id: PBO:0072629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-spondin 4","termid":"PBO:0072629"}


id: MONDO:0015583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The 2p21 microdeletion syndrome consists of cystinuria, neonatal seizures, hypotonia, severe growth and developmental delay, facial dysmorphism, and lactic acidemia.","definition_xrefs":["Orphanet:163693"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hypotonia-cystinuria syndrome","termid":"MONDO:0011669"},{"relation_name":"excluded_subClassOf","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 2","termid":"MONDO:0016884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2p21 microdeletion syndrome","secondary_identifiers":["DECIPHER:87","GARD:16999","MEDGEN:930206","SCTID:719652007","UMLS:C4304537"],"synonyms":[{"name":"2p21 deletion syndrome","type":"exact"},{"name":"2p21 microdeletion syndrome","type":"exact"},{"name":"Del(2)(p21)","type":"exact"},{"name":"monosomy 2p21","type":"exact"}],"termid":"MONDO:0015583","xrefs":{"Monarch":{"xref_id":"0015583"}}}


id: GO:1990228
data:
  {"annotated_genes":["SJAG_04397","SJAG_01238","SJAG_01063","SJAG_00532","SJAG_00894","SJAG_00186","SJAG_03932","SJAG_03862","SJAG_01302"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77219,105659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002144"},{"annotations":[113659,102899,98058,92754,92984,109471,106677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099128"}]},"cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the transfer of sulfur atoms from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:bhm","PMID:17350958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_01302":null,"SJAG_03862":null,"SJAG_03932":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005829","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"sulfurtransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SufE complex","type":"narrow"},{"name":"SufE dimer","type":"narrow"},{"name":"ThiF-ThiS complex","type":"related"},{"name":"sulfur transfer complex","type":"exact"}],"termid":"GO:1990228","terms_by_termid":{"GO:0002144":null,"GO:0099128":null}}


