# terms

id: GO:1904498
data:
  {"annotated_genes":["SJAG_02831","SJAG_04703","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92123,110594,118436],"is_not":false,"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"Any protein localization to actomyosin contractile ring that is involved in mitotic cytokinesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:25688133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"is_a","term_name":"protein localization to actomyosin contractile ring","termid":"GO:1990179"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_02831":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0051179","GO:0000281","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"protein localization to mitotic actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actomyosin contractile ring involved in cytokinesis after mitosis","type":"exact"},{"name":"protein localisation to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"protein localization to actomyosin contractile ring during mitotic cytokinesis","type":"related"},{"name":"protein localization to actomyosin contractile ring involved in cytokinesis after mitosis","type":"exact"},{"name":"protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"}],"termid":"GO:1904498","terms_by_termid":{"GO:1904498":null}}


id: PBO:0076760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDH antisense RNA 1","termid":"PBO:0076760"}


id: GO:0007009
data:
  {"annotated_genes":["SJAG_01470","SJAG_00870","SJAG_02613","SJAG_02878","SJAG_02087","SJAG_04887","SJAG_02338","SJAG_01912","SJAG_02924","SJAG_02838","SJAG_04930","SJAG_02351","SJAG_03170","SJAG_00700","SJAG_01233","SJAG_00053","SJAG_00261","SJAG_04227","SJAG_00185"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89948,90203,91696,103668,104173,110558,114474,117328,117642,118260],"is_not":false,"summary":null,"term":"GO:0007009"},{"annotations":[92149,77677,95083,96161,109989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032220"},{"annotations":[72962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"},{"annotations":[71848,73744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097320"},{"annotations":[71784,101001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097036"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the plasma membrane.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00185":null,"SJAG_00261":null,"SJAG_00700":null,"SJAG_00870":null,"SJAG_01233":null,"SJAG_01470":null,"SJAG_01912":null,"SJAG_02087":null,"SJAG_02338":null,"SJAG_02351":null,"SJAG_02613":null,"SJAG_02838":null,"SJAG_02878":null,"SJAG_02924":null,"SJAG_03170":null,"SJAG_04227":null,"SJAG_04887":null,"SJAG_04930":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"plasma membrane organisation","type":"exact"},{"name":"plasma membrane organization and biogenesis","type":"related"}],"termid":"GO:0007009","terms_by_termid":{"GO:0007009":null,"GO:0017121":null,"GO:0032220":null,"GO:0097036":null,"GO:0097320":null}}


id: GO:0045273
data:
  {"annotated_genes":["SJAG_02398","SJAG_01671","SJAG_03920","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74446,75821,76479,88603],"is_not":false,"summary":null,"term":"GO:0045273"}]},"cv_name":"cellular_component","definition":"A part of the respiratory chain, containing the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"respiratory chain complex II (succinate dehydrogenase)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"electron transport complex II","type":"related"}],"termid":"GO:0045273","terms_by_termid":{"GO:0045273":null}}


id: PBO:0042816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide synthase 5","termid":"PBO:0042816"}


id: MONDO:0957316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epidermolytic hyperkeratosis (obsolete MONDO:0957316)","termid":"MONDO:0957316","xrefs":{"Monarch":{"xref_id":"0957316"}}}


id: PBO:0083597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; deletion confers resistance to cisplatin, hypersensitivity to 5-fluorouracil, and growth defect at high pH with high calcium; overlaps gene for SWI3 transcription factor","termid":"PBO:0083597"}


id: PBO:0072798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 4","termid":"PBO:0072798"}


id: SO:0000895
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by DNA methylation, resulting in repression of transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced_by_DNA_modification","termid":"SO:0000894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_DNA_methylation","synonyms":[{"name":"silenced by DNA methylation","type":"exact"}],"termid":"SO:0000895"}


id: PBO:0071540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 5","termid":"PBO:0071540"}


id: MOD:00487
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:115#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized proline biotinylated with biotin-LC-hydrazide","synonyms":[{"name":"OxProBiotin","type":"related"},{"name":"Oxidized Proline biotinylated with biotin-LC-hydrazide","type":"related"}],"termid":"MOD:00487"}


id: PR:Q9UT76
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translation initiation factor eIF-2B subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10233:SF9","OMA:SCHPO00681","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.14c","secondary_identifiers":["UniProtKB:Q9UT76"],"synonyms":[{"name":"Spom972h-EIF2B2","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT76"}


id: PBO:0079217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase like domain containing 2","termid":"PBO:0079217"}


id: MOD:00964
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine epsilon amino to imine + 12 amu","synonyms":[{"name":"N6-(methylidene)-lysine","type":"exact"}],"termid":"MOD:00964"}


id: GO:0010486
data:
  {"annotated_genes":["SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90998],"is_not":false,"summary":null,"term":"GO:0010486"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Mn2+(in) + H+(out) = Mn2+(out) + H+(in).","definition_xrefs":["PMID:17559518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"manganese:proton antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"manganese:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0010486","terms_by_termid":{"GO:0010486":null}}


id: PBO:0075177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 7","termid":"PBO:0075177"}


id: GO:2001163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues.","definition_xrefs":["PMID:15149594"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues (obsolete GO:2001163)","termid":"GO:2001163"}


id: MONDO:0000326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lissencephaly (obsolete MONDO:0000326)","termid":"MONDO:0000326","xrefs":{"Monarch":{"xref_id":"0000326"}}}


id: PBO:0068839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 77, pseudogene","termid":"PBO:0068839"}


id: PBO:0077836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophoblast glycoprotein","termid":"PBO:0077836"}


id: GO:0006130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-phosphofructokinase reduction (obsolete GO:0006130)","synonyms":[{"name":"6-phosphofructokinase reduction","type":"exact"}],"termid":"GO:0006130"}


id: PBO:0027142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methyltransferase_activity","termid":"PBO:0027142"}


id: PBO:0091893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane high-affinity glucose/fructose:proton symporter Ght5","termid":"PBO:0091893"}


id: PBO:0003901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial processing peptidase(MPP) complex alpha subunit Mas2 (predicted)","termid":"PBO:0003901"}


id: FYPO:0006163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin","synonyms":[{"name":"normal protein localisation to chromatin","type":"exact"}],"termid":"FYPO:0006163"}


id: PBO:0080916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 5","termid":"PBO:0080916"}


id: GO:0160036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of postsynaptic density assembly.","definition_xrefs":["PMID:17626212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic density assembly","termid":"GO:0099151"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"positive regulation of postsynaptic density organization","termid":"GO:1905876"},{"relation_name":"positively_regulates","term_name":"postsynaptic density assembly","termid":"GO:0097107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of postsynaptic density assembly","termid":"GO:0160036"}


id: PR:O74339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam41 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.06c","synonyms":[{"name":"CDP-DAG synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diacylglycerol synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tam41","type":"exact"},{"name":"TAM41 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mitochondrial translocator assembly and maintenance protein 41 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74339"}


id: GO:0071540
data:
  {"annotated_genes":["SJAG_02376","SJAG_04744","SJAG_04981","SJAG_03147","SJAG_02164","SJAG_03472","SJAG_02628","SJAG_02995"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68303,74893,94580,97526,97585,98728,105406,110489],"is_not":false,"summary":null,"term":"GO:0071540"}]},"cv_name":"cellular_component","definition":"An eukaryotic translation initiation factor 3 complex that contains the PCI-domain protein eIF3e.","definition_xrefs":["PMID:19061185","PMID:15904532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic translation initiation factor 3 complex","termid":"GO:0005852"}],"gene_count":8,"genes_by_uniquename":{"SJAG_02164":null,"SJAG_02376":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 complex, eIF3e","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"eIF3e-containing eukaryotic translation initiation factor 3 complex","type":"exact"}],"termid":"GO:0071540","terms_by_termid":{"GO:0071540":null}}


id: GO:0044352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded, uncoated intracellular vesicle formed by the process of pinocytosis.","definition_xrefs":["PMID:14732047","PMID:14731589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005768","GO:0005575"],"is_obsolete":false,"name":"pinosome","secondary_identifiers":["NIF_Subcellular:sao1925368674"],"synonyms":[{"name":"pinocytic vesicle","type":"exact"}],"termid":"GO:0044352"}


id: GO:0097588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility due to movement of bacterial- or archaeal-type flagella.","definition_xrefs":["GOC:krc","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium or flagellum-dependent cell motility","termid":"GO:0001539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"archaeal or bacterial-type flagellum-dependent cell motility","termid":"GO:0097588"}


id: GO:0035167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of blood cells from the larval lymph gland. The lymph gland consists of three to six bilaterally paired lobes that are attached to the cardioblasts during larval stages, and it degenerates during pupal stages.","definition_xrefs":["PMID:12445385","GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic hemopoiesis","termid":"GO:0035166"},{"relation_name":"part_of","term_name":"larval development","termid":"GO:0002164"},{"relation_name":"part_of","term_name":"lymph gland development","termid":"GO:0048542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval lymph gland hemopoiesis","synonyms":[{"name":"larval lymph gland haematopoiesis","type":"exact"},{"name":"larval lymph gland haemopoiesis","type":"exact"},{"name":"larval lymph gland hematopoiesis","type":"exact"}],"termid":"GO:0035167"}


id: PR:O94658
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3602 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.07","synonyms":[{"name":"Spom972h-rpl3602","type":"exact"}],"termid":"PR:O94658"}


id: PBO:0050593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1","termid":"PBO:0050593"}


id: FYPO:0002893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription from RNA polymerase II promoter occurs to a lower extent than normal during a cellular response to cAMP. Specific genes are more highly transcribed in the presence of cAMP in the mutant than in wild type.","definition_xrefs":["PMID:22496451","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription during vegetative growth","termid":"FYPO:0000624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased repression of transcription during cellular response to cAMP","synonyms":[{"name":"decreased negative regulation of transcription from RNA polymerase II promoter during cellular response to cAMP","type":"exact"},{"name":"decreased repression of transcription during cellular response to cAMP during mitotic cell cycle","type":"related"},{"name":"decreased repression of transcription during cellular response to cAMP during vegetative growth","type":"exact"},{"name":"decreased transcriptional repression during cellular response to cAMP","type":"exact"},{"name":"reduced repression of transcription during cellular response to cAMP","type":"exact"}],"termid":"FYPO:0002893"}


id: PBO:0084073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase with similarity to translation release factors; together with binding partner Dom34p, facilitates ribosomal subunit dissociation and peptidyl-tRNA release when translation is stalled, particularly in 3' UTRs; genetically implicated in mRNA no-go decay; HBS1 has a paralog, SKI7, that arose from the whole genome duplication","termid":"PBO:0084073"}


id: PBO:0028651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rRNA_precursor_level","termid":"PBO:0028651"}


id: PBO:0015654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, predicted cell surface protein","termid":"PBO:0015654"}


id: PBO:0045694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 2","termid":"PBO:0045694"}


id: MONDO:0008560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemostatic disorder characterized by a poor anticoagulant response to activated protein C (APC). The activated form of Factor V (Factor Va) is more slowly degraded by activated protein C. Factor V Leiden mutation (R506Q) is the most common cause of APC resistance.","definition_xrefs":["MESH:D020016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"inherited thrombophilia","termid":"MONDO:0100240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombophilia due to activated protein C resistance","secondary_identifiers":["SCTID:421527008","MEDGEN:396074","DOID:0111902","ICD9:289.81","OMIM:188055","UMLS:C1861171"],"synonyms":[{"name":"APC resistance","type":"related"},{"name":"Activated Protein C resistance","type":"related"},{"name":"Pccf deficiency","type":"related"},{"name":"Proc cofactor deficiency","type":"related"},{"name":"THPH2","type":"related"},{"name":"resistance, APC","type":"related"},{"name":"thrombophilia 2 due to activated protein C resistance","type":"exact"},{"name":"thrombophilia 5","type":"related"},{"name":"thrombophilia due to ACTIVATED PROTEIN C resistance","type":"related"},{"name":"thrombophilia due to Factor 5 Leiden","type":"related"},{"name":"thrombophilia due to activated protein C resistance","type":"exact"},{"name":"thrombophilia due to deficiency of Activated Protein C cofactor","type":"related"},{"name":"thrombophilia, susceptibility to, due to factor V Leiden","type":"related"}],"termid":"MONDO:0008560","xrefs":{"Monarch":{"xref_id":"0008560"}}}


id: PBO:0068671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 52, pseudogene","termid":"PBO:0068671"}


id: GO:0038057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tumor necrosis factor ligand superfamily member 11 (TNFSF11), a member of the tumor necrosis factor (TNF) cytokine family.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor binding","termid":"GO:0043120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TNFSF11 binding","synonyms":[{"name":"CD254 binding","type":"exact"},{"name":"ODF binding","type":"exact"},{"name":"OPGL binding","type":"exact"},{"name":"RANKL binding","type":"exact"},{"name":"TNF-related activation-induced cytokine binding","type":"exact"},{"name":"TRANCE binding","type":"exact"},{"name":"osteoclast differentiation factor binding","type":"exact"},{"name":"osteoprotegerin ligand binding","type":"exact"},{"name":"receptor activator of nuclear factor kappa-B ligand binding","type":"exact"},{"name":"tumor necrosis factor (ligand) superfamily member 11 binding","type":"exact"},{"name":"tumor necrosis factor ligand superfamily member 11 binding","type":"exact"},{"name":"tumor necrosis factor superfamily member 11 binding","type":"exact"}],"termid":"GO:0038057"}


id: GO:0043830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: fumarate + coenzyme M + coenzyme B = succinate + coenzyme M + coenzyme B + heterodisulfide.","definition_xrefs":["PMID:2509466"],"gene_count":0,"genotype_count":0,"name":"obsolete thiol-driven fumarate reductase activity (obsolete GO:0043830)","termid":"GO:0043830"}


id: GO:0030405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete matrix metalloproteinase 19 activity (obsolete GO:0030405)","synonyms":[{"name":"MMP-19","type":"exact"},{"name":"matrix metalloproteinase 19 activity","type":"exact"}],"termid":"GO:0030405"}


id: PBO:0069608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 885, pseudogene","termid":"PBO:0069608"}


id: PBO:0001519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain","termid":"PBO:0001519"}


id: GO:0034007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + H2O = (S)-linalool + diphosphate.","definition_xrefs":["RHEA:24116","EC:4.2.3.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"S-linalool synthase activity","secondary_identifiers":["KEGG_REACTION:R07631","MetaCyc:4.2.3.25-RXN"],"synonyms":[{"name":"3S-linalool synthase activity","type":"related"},{"name":"LIS","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [(3S)-linalool-forming] activity","type":"related"}],"termid":"GO:0034007"}


id: GO:0060767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population that contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"}


id: MONDO:0014887
data:
  {"annotated_genes":["SJAG_04991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85922],"is_not":false,"summary":null,"term":"MONDO:0014887"}]},"cv_name":"mondo","definition":"Any bone marrow failure syndrome in which the cause of the disease is a mutation in the DNAJC21 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone marrow failure syndrome","termid":"MONDO:0000159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"bone marrow failure syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310744","MEDGEN:934711","OMIM:617052"],"synonyms":[{"name":"BMFS3","type":"exact"},{"name":"DNAJC21 bone marrow failure syndrome","type":"exact"},{"name":"bone marrow failure syndrome 3","type":"exact"},{"name":"bone marrow failure syndrome caused by mutation in DNAJC21","type":"exact"},{"name":"bone marrow failure syndrome type 3","type":"exact"}],"termid":"MONDO:0014887","terms_by_termid":{"MONDO:0014887":null},"xrefs":{"Monarch":{"xref_id":"0014887"}}}


id: SO:0000845
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is a promoter for RNA polymerase III type 1.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000845 RNApol_III_promoter_type_1_region (obsolete SO:0000845)","termid":"SO:0000845"}


id: PBO:0071027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 29","termid":"PBO:0071027"}


id: PBO:0053211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 9","termid":"PBO:0053211"}


id: PBO:0051701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase A","termid":"PBO:0051701"}


id: GO:0006500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a palmitoyl group to the N-terminal amino acid residue of a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein lipidation","termid":"GO:0006498"},{"relation_name":"is_a","term_name":"protein palmitoylation","termid":"GO:0018345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"N-terminal protein palmitoylation","termid":"GO:0006500"}


id: PBO:0068373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 166","termid":"PBO:0068373"}


id: PBO:0090754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC8 DNA repair homolog","termid":"PBO:0090754"}


id: FYPO:0007978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased during meiotic prophase I.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing during meiosis I prophase","termid":"FYPO:0007977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"decreased homologous chromosome pairing during meiosis I prophase","termid":"FYPO:0007978"}


id: PBO:0079330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 17B","termid":"PBO:0079330"}


id: PBO:0068545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 151, pseudogene","termid":"PBO:0068545"}


id: PBO:0059188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member D","termid":"PBO:0059188"}


id: MONDO:0011045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital syndromic form of split-hand/foot malformation (SHFM). It is characterized by microcephaly, microphthalmia, ectrodactyly of the lower limbs and prognathism. Intellectual deficit has been reported. MMEP syndrome is considered to be a very rare condition, although the exact prevalence remains unknown. The etiology is not completely understood. Disruption of the sorting nexin 3 gene (SNX3; 6q21) has been shown to play a causative role in MMEP, although this was not confirmed in recent studies.","definition_xrefs":["Orphanet:3434"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"MMEP syndrome","secondary_identifiers":["OMIM:601349","SCTID:715533002","UMLS:C1832440","GARD:3693","DOID:0111803","MEDGEN:330469","MESH:C537686"],"synonyms":[{"name":"MCOPS8","type":"exact"},{"name":"MMEP","type":"related"},{"name":"Viljoen Smart syndrome","type":"related"},{"name":"Viljoen-Smart syndrome","type":"exact"},{"name":"microcephaly microphthalmia ectrodactyly of lower limbs and prognathism","type":"related"},{"name":"microcephaly, microphthalmia, ectrodactyly of Lower limbs, and prognathism","type":"related"},{"name":"microcephaly-microphthalmia-ectrodactyly of lower limbs-prognathism syndrome","type":"exact"},{"name":"microphthalmia syndromic 8","type":"related"},{"name":"microphthalmia, syndromic 8","type":"related"},{"name":"syndromic microphthalmia type 8","type":"exact"}],"termid":"MONDO:0011045","xrefs":{"Monarch":{"xref_id":"0011045"}}}


id: MONDO:0700146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm arising from the prostate gland of a dog.","definition_xrefs":["NCIT:C128122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"},{"relation_name":"is_a","term_name":"prostate cancer, dog","termid":"MONDO:1010961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine prostate carcinoma","termid":"MONDO:0700146","xrefs":{"Monarch":{"xref_id":"0700146"}}}


id: MOD:01259
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:314#K","PubMed:9448752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylmaleimide derivatized residue","termid":"MOD:00625"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylmaleimide - site K","synonyms":[{"name":"Nmethylmaleimide","type":"related"}],"termid":"MOD:01259"}


id: MONDO:0017145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"beta-thalassemia and related diseases","secondary_identifiers":["Orphanet:275749","GARD:21023","UMLS:C5680748","MEDGEN:1826095"],"termid":"MONDO:0017145","xrefs":{"Monarch":{"xref_id":"0017145"}}}


id: GO:0120321
data:
  {"annotated_genes":["SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[119382],"is_not":false,"summary":null,"term":"GO:0120321"}]},"cv_name":"cellular_component","definition":"The region of the nuclear envelope situated in close proximity to a nuclear pore complex.","definition_xrefs":["PMID:21802294","PMID:24184107","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear envelope adjacent to nuclear pore complex","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:28954740":null},"synonyms":[{"name":"associated with the nuclear pore","type":"related"},{"name":"nuclear envelope adjacent to NPC","type":"exact"},{"name":"nuclear envelope periphery of the nuclear pore complex","type":"exact"}],"termid":"GO:0120321","terms_by_termid":{"GO:0120321":null}}


id: PBO:0070922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 30","termid":"PBO:0070922"}


id: MONDO:0019980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bilateral renal hypoplasia is a form of renal hypoplasia, a renal developmental anomaly in which both kidneys are small and have a deficit in the number of nephrons present.","definition_xrefs":["Orphanet:97362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypoplasia","termid":"MONDO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal hypoplasia, bilateral","secondary_identifiers":["MEDGEN:609099","SCTID:268232000","GARD:19374","UMLS:C0431692","ICD10CM:Q60.4"],"termid":"MONDO:0019980","xrefs":{"Monarch":{"xref_id":"0019980"}}}


id: GO:1900791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving shamixanthone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"shamixanthone metabolic process","synonyms":[{"name":"shamixanthone metabolism","type":"exact"}],"termid":"GO:1900791"}


id: MONDO:0020400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital supravalvular mitral ring is a rare, congenital, mitral valve malformation characterized by an abnormal ridge of the connective tissue on the atrial side of the mitral valve, which can present clinically with signs and symptoms of left ventricle inflow obstruction (dyspnea, tachypnea, pulmonary hypertension, right ventricle hypertrophy, pulmonary edema). Association with other mitral valve anomalies, aortic stenosis, ventricular septal defect, patent ductus arteriosus, double-outlet right ventricle, pulmonary hypertension, and Shone complex has been reported.","definition_xrefs":["Orphanet:99059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital supravalvular mitral ring","secondary_identifiers":["UMLS:C0265851","NANDO:2200308","MEDGEN:539536","ICD10CM:Q23.2","GARD:19626"],"termid":"MONDO:0020400","xrefs":{"Monarch":{"xref_id":"0020400"}}}


id: PBO:0038287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charge_at_ph7","termid":"PBO:0038287"}


id: GO:0039503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the innate immune response of the host organism, the host's first line of defense.","definition_xrefs":["GOC:sp","GOC:bf","UniProtKB-KW:KW-1090","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host innate immune response (obsolete GO:0039503)","synonyms":[{"name":"inhibition of host innate immune response by virus","type":"exact"},{"name":"negative regulation by virus of host innate immune response","type":"exact"},{"name":"negative regulation by virus of host innate immunity","type":"exact"},{"name":"suppression by virus of host innate immunity","type":"exact"}],"termid":"GO:0039503"}


id: MONDO:0022936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"de Hauwere Leroy adriaenssens syndrome","secondary_identifiers":["MESH:C535991","MEDGEN:419709","UMLS:C2931078"],"synonyms":[{"name":"iris dysplasia, orbital hypertelorism, and psychomotor retardation","type":"related"}],"termid":"MONDO:0022936","xrefs":{"Monarch":{"xref_id":"0022936"}}}


id: GO:0099545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by a trans-synaptic protein complex.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by trans-synaptic complex","termid":"GO:0099545"}


id: GO:0004692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"cGMP dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide-dependent protein kinase activity","termid":"GO:0004690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0004672","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"cGMP-dependent protein kinase activity","secondary_identifiers":["Reactome:R-HSA-1497853","Reactome:R-HSA-418549","Reactome:R-HSA-1475422","Reactome:R-HSA-418442","EC:2.7.11.12"],"synonyms":[{"name":"3':5'-cyclic GMP-dependent protein kinase activity","type":"related"},{"name":"ATP:protein phosphotransferase (cGMP-dependent) activity","type":"related"},{"name":"PKG","type":"related"},{"name":"PKG 1alpha","type":"related"},{"name":"PKG 1beta","type":"related"},{"name":"PKG II","type":"related"},{"name":"STK23","type":"related"},{"name":"cGMP-dependent protein kinase ibeta activity","type":"related"},{"name":"guanosine 3':5'-cyclic monophosphate-dependent protein kinase activity","type":"related"}],"termid":"GO:0004692"}


id: FYPO:0003462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is normal (i.e. indistinguishable from wild type) when the cell is subject to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular trehalose level","termid":"FYPO:0001449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular trehalose level during cellular response to oxidative stress","synonyms":[{"name":"normal cellular trehalose accumulation during cellular response to oxidative stress","type":"related"},{"name":"normal cellular trehalose level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal cellular trehalose level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal cellular trehalose level during oxidative stress response","type":"exact"}],"termid":"FYPO:0003462"}


id: PBO:0087849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trans-aconitate methyltransferase; cytosolic enzyme that catalyzes the methyl esterification of 3-isopropylmalate, an intermediate of the leucine biosynthetic pathway, and trans-aconitate, which inhibits the citric acid cycle","termid":"PBO:0087849"}


id: MOD:00980
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass - OBSOLETE because redundant, the difference component of MOD:01060. Remap to MOD:01060.","definition_xrefs":["DeltaMass:337"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00980 Carboxamidomethyl (on Cysteine) (obsolete MOD:00980)","termid":"MOD:00980"}


id: GO:0071173
data:
  {"annotated_genes":["SJAG_04126","SJAG_04699","SJAG_02169","SJAG_03353","SJAG_01330","SJAG_04884","SJAG_01082","SJAG_00883","SJAG_04259","SJAG_03681","SJAG_04999","SJAG_03327","SJAG_03126","SJAG_01679","SJAG_02336","SJAG_01297","SJAG_01837","SJAG_02451"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114058,90516,115693,99392,108049,103686,107029,111752,113570],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[114288,106116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[116460,75086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[109700,114291,106118,99236,115348,101595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[93994],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[113575],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[116467],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[101137],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signaling process that delays the metaphase/anaphase transition until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle checkpoint signaling","termid":"GO:0031577"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072486"],"synonyms":[{"name":"SAC","type":"broad"},{"name":"signal transduction involved in spindle assembly checkpoint","type":"exact"},{"name":"spindle assembly checkpoint","type":"exact"}],"termid":"GO:0071173","terms_by_termid":{"GO:0007094":null,"GO:0033316":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0106268
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3,5-dichloro-2,4,6-trihydroxyphenyl)hexan-1-one + S-adenosyl-L-methionine = 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:48396","PMID:20231486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"3,5-dichloro-THPH methyl transferase activity","synonyms":[{"name":"DIF-1 syntase","type":"related"}],"termid":"GO:0106268"}


id: MOD:00060
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N-acetyl-L-serine.","definition_xrefs":["PubMed:15350136","PubMed:14730666","PubMed:6997045","PubMed:1880797","RESID:AA0051","PubMed:11857757","PubMed:2106685","PubMed:12175151","PubMed:11999733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated L-serine","termid":"MOD:00647"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-serine","synonyms":[{"name":"(2S)-2-acetamido-3-hydroxypropanoic acid","type":"exact"},{"name":"2-acetylamino-3-hydroxypropanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-hydroxypropanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"MOD_RES N-acetylserine","type":"exact"},{"name":"N-acetyl-L-serine","type":"exact"},{"name":"N-acetylated L-serine","type":"exact"},{"name":"N-acetylserine","type":"exact"},{"name":"NAcSer","type":"exact"}],"termid":"MOD:00060"}


id: PBO:0079431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma 1","termid":"PBO:0079431"}


id: PBO:0034607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_rDNA_replication_fork_barrier","termid":"PBO:0034607"}


id: GO:0051803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of cytolysis by that organism of cells in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytolysis in other organism involved in symbiotic interaction (obsolete GO:0051803)","synonyms":[{"name":"down regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"down-regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"downregulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"inhibition of cytolysis of cells in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"negative regulation of cytolysis of cells in other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0051803"}


id: PBO:0076122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STXBP5 antisense RNA 1","termid":"PBO:0076122"}


id: PBO:0075298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sine oculis binding protein homolog","termid":"PBO:0075298"}


id: MONDO:1011104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal agenesis that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal agenesis, non-human animal","termid":"MONDO:1010272"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal agenesis, rabbit","secondary_identifiers":["OMIA:002007-9986"],"termid":"MONDO:1011104","xrefs":{"Monarch":{"xref_id":"1011104"}}}


id: PBO:0090424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase Tkt1","termid":"PBO:0090424"}


id: MONDO:0012989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the STIL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 7, primary, autosomal recessive","secondary_identifiers":["UMLS:C2675187","OMIM:612703","DOID:0070278","GARD:15580","MEDGEN:436370","MESH:C567198"],"synonyms":[{"name":"MCPH7","type":"related"},{"name":"STIL autosomal recessive primary microcephaly","type":"exact"},{"name":"autosomal recessive primary microcephaly caused by mutation in STIL","type":"exact"},{"name":"microcephaly 7, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0012989","xrefs":{"Monarch":{"xref_id":"0012989"}}}


id: GO:0042060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that restore integrity to a damaged tissue, following an injury.","definition_xrefs":["GOC:bf","PMID:15269788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing","secondary_identifiers":["Wikipedia:Wound_healing"],"termid":"GO:0042060"}


id: MONDO:0003612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the uterine ligament.","definition_xrefs":["NCIT:C126498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system cancer","termid":"MONDO:0000637"},{"relation_name":"is_a","term_name":"cervical cancer","termid":"MONDO:0002974"},{"relation_name":"is_a","term_name":"uterine ligament neoplasm","termid":"MONDO:0021629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine ligament cancer","secondary_identifiers":["DOID:5727","UMLS:C0864950","MEDGEN:923070"],"synonyms":[{"name":"cancer of uterine ligament","type":"exact"},{"name":"malignant neoplasm of uterine ligament","type":"exact"},{"name":"malignant uterine ligament neoplasm","type":"exact"},{"name":"tumour of the uterine ligament","type":"related"},{"name":"uterine ligament cancer","type":"exact"}],"termid":"MONDO:0003612","xrefs":{"Monarch":{"xref_id":"0003612"}}}


id: PBO:0090447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, implicated in DNA repair","termid":"PBO:0090447"}


id: MONDO:0015385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete external auditory canal aplasia/hypoplasia (obsolete MONDO:0015385)","secondary_identifiers":["Orphanet:141074","icd11.foundation:534621578"],"synonyms":[{"name":"external auditory canal stenosis/atresia","type":"exact"}],"termid":"MONDO:0015385","xrefs":{"Monarch":{"xref_id":"0015385"}}}


id: PBO:0075491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 1","termid":"PBO:0075491"}


id: PBO:0076900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 54","termid":"PBO:0076900"}


id: GO:0047292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6AS,11AS)-3,6A,9-trihydroxypterocarpan + dimethylallyl-pyrophosphate = glyceollin + diphosphate.","definition_xrefs":["EC:2.5.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"trihydroxypterocarpan dimethylallyltransferase activity","synonyms":[{"name":"dimethylallyl-diphosphate:(6aS,11aS)-3,6a,9-trihydroxypterocarpan dimethylallyltransferase activity","type":"related"},{"name":"dimethylallyl-diphosphate:(6aS,11aS)-3,6a,9-trihydroxypterocarpan dimethyltransferase activity","type":"related"},{"name":"dimethylallylpyrophosphate:3,6a,9-trihydroxypterocarpan dimethylallyltransferase activity","type":"related"},{"name":"dimethylallylpyrophosphate:trihydroxypterocarpan dimethylallyl transferase activity","type":"related"}],"termid":"GO:0047292"}


id: PATO:0000359
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000359 water content value (obsolete PATO:0000359)","termid":"PATO:0000359"}


id: PBO:0004069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin Dnm1","termid":"PBO:0004069"}


id: PATO:0000631
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being stretched out and lying at full length along the ground.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostrate","termid":"PATO:0000631"}


id: PBO:0031078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubule_cytoskeleton_organization_phenotype","termid":"PBO:0031078"}


id: PBO:0072690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX1 partner transcriptional co-repressor 1","termid":"PBO:0072690"}


id: GO:0031023
data:
  {"annotated_genes":["SJAG_01805","SJAG_00719","SJAG_02529","SJAG_02795","SJAG_03200","SJAG_03915","SJAG_00794","SJAG_01760","SJAG_03052","SJAG_04745","SJAG_00773","SJAG_04003","SJAG_04901","SJAG_04558","SJAG_02651","SJAG_03264","SJAG_03544","SJAG_04781","SJAG_00594"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104340,104669],"is_not":false,"summary":null,"term":"GO:0031023"},{"annotations":[102119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031025"},{"annotations":[95100],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140456"},{"annotations":[95101,75484,77505],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[112558,102120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031024"},{"annotations":[93595,114916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990395"},{"annotations":[112633,112432,107224,114917,89920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903087"},{"annotations":[98075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905047"},{"annotations":[96668,113721,91091],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902441"},{"annotations":[89433,95164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051300"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microtubule organizing center, a structure from which microtubules grow.","definition_xrefs":["GOC:jl","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00594":null,"SJAG_00719":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_01760":null,"SJAG_01805":null,"SJAG_02529":null,"SJAG_02651":null,"SJAG_02795":null,"SJAG_03052":null,"SJAG_03200":null,"SJAG_03264":null,"SJAG_03544":null,"SJAG_03915":null,"SJAG_04003":null,"SJAG_04558":null,"SJAG_04745":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"microtubule organizing center organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"microtubule organising center organisation","type":"exact"},{"name":"microtubule organizing center organization and biogenesis","type":"related"}],"termid":"GO:0031023","terms_by_termid":{"GO:0000073":null,"GO:0031023":null,"GO:0031024":null,"GO:0031025":null,"GO:0051300":null,"GO:0140456":null,"GO:1902441":null,"GO:1903087":null,"GO:1905047":null,"GO:1990395":null}}


id: GO:0005157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a macrophage colony-stimulating factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"macrophage colony-stimulating factor receptor binding","synonyms":[{"name":"M-CSF receptor binding","type":"exact"},{"name":"macrophage colony stimulating factor receptor binding","type":"exact"},{"name":"macrophage colony-stimulating factor receptor ligand","type":"narrow"}],"termid":"GO:0005157"}


id: GO:0044524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by the addition of sulfur.","definition_xrefs":["PMID:8161529","GOC:jl","GOC:jsg","PMID:19903941","PMID:22169477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein sulfhydration","termid":"GO:0044524"}


id: PBO:0053198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphatic endothelial transcriptional regulator lncRNA 1","termid":"PBO:0053198"}


id: PR:P41831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4A8.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.14","synonyms":[{"name":"Spom972h-SPAC4A8.14","type":"exact"},{"name":"phosphoribosyl pyrophosphate synthase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41831"}


id: PBO:0113130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily-conserved 5'-3' exonuclease; deNADding enzyme that modulates mitochondrial NAD-capped RNA; component of cytoplasmic P-bodies involved in mRNA decay; positively regulates transcription initiation and elongation; involved in microtubule-mediated processes, filamentous growth, ribosomal RNA maturation, telomere maintenance, and tRNA intron turnover; negative regulator of autophagy; activated by scavenger decapping enzyme Dcs1p; role in preventing L-A mycovirus pathogenesis","termid":"PBO:0113130"}


id: MONDO:0044241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mydriatic response to pharmacologic agents (obsolete MONDO:0044241)","secondary_identifiers":["OMIM:159410"],"synonyms":[{"name":"mydriatic response to pharmacologic agents","type":"related"}],"termid":"MONDO:0044241","xrefs":{"Monarch":{"xref_id":"0044241"}}}


id: GO:0072345
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when nicotinic acid adenine dinucleotide phosphate (NAADP) has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:19387438","PMID:19557428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"NAADP-sensitive calcium-release channel activity","secondary_identifiers":["Reactome:R-HSA-2685505"],"termid":"GO:0072345"}


id: PBO:0084319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin; involved in nuclear import and export of proteins, including import of replication protein A and export of Far1p and transcription factors Swi5p, Swi6p, Msn2p, and Pho4p; required for re-export of mature tRNAs after their retrograde import from the cytoplasm; exportin-5 homolog","termid":"PBO:0084319"}


id: PBO:0041330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 88","termid":"PBO:0041330"}


id: PBO:0072581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 pseudogene 4","termid":"PBO:0072581"}


id: GO:1901792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3-(2,3-dihydroxyphenyl)propanoate.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"3-(2,3-dihydroxyphenyl)propanoate metabolic process","termid":"GO:1901790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-(2,3-dihydroxyphenyl)propanoate biosynthetic process","synonyms":[{"name":"3-(2,3-dihydroxyphenyl)propanoate anabolism","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate biosynthesis","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate formation","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate synthesis","type":"exact"}],"termid":"GO:1901792"}


id: FYPO:0005269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein kinase activity during cellular response to H2O2","type":"exact"},{"name":"reduced protein kinase activity during cellular response to H2O2","type":"exact"},{"name":"reduced protein kinase activity during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0005269"}


id: GO:0021860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a pyramidal neuron from its initial formation to its mature state.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron development","termid":"GO:0021884"},{"relation_name":"part_of","term_name":"pyramidal neuron differentiation","termid":"GO:0021859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyramidal neuron development","synonyms":[{"name":"projection neuron development","type":"broad"}],"termid":"GO:0021860"}


id: FYPO:0007264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the eisosome filament is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eisosome morphology","termid":"FYPO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"long eisosome filament","synonyms":[{"name":"elongated eisosome filament","type":"exact"},{"name":"increased eisosome filament length","type":"exact"},{"name":"long eisosome filament during mitotic cell cycle","type":"related"},{"name":"long eisosome filament during vegetative growth","type":"exact"},{"name":"long linear eisosomes","type":"exact"}],"termid":"FYPO:0007264"}


id: PBO:0046271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 10","termid":"PBO:0046271"}


id: GO:0106411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'XMP + H20 = phosphate + xanthosine.","definition_xrefs":["PMID:34824243","RHEA:28530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-nucleotidase activity","termid":"GO:0008253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"XMP 5'-nucleosidase activity","secondary_identifiers":["MetaCyc:XMPXAN-RXN"],"termid":"GO:0106411"}


id: PBO:0027007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ascospore_wall_thickness","termid":"PBO:0027007"}


id: GO:0033472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-L-galactose, a substance composed of L-galactose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"GDP-L-galactose metabolic process","termid":"GO:0033471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"GDP-L-galactose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5115"],"synonyms":[{"name":"GDP-L-galactose anabolism","type":"exact"},{"name":"GDP-L-galactose biosynthesis","type":"exact"},{"name":"GDP-L-galactose formation","type":"exact"},{"name":"GDP-L-galactose synthesis","type":"exact"}],"termid":"GO:0033472"}


id: PBO:0054405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1801","termid":"PBO:0054405"}


id: PBO:0000408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NAD+ transporter (predicted)","termid":"PBO:0000408"}


id: GO:0075130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont modulates the frequency, rate or extent of protein kinase-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of host protein kinase-mediated signal transduction (obsolete GO:0075130)","synonyms":[{"name":"modulation by symbiont of host protein kinase-mediated signal transduction","type":"exact"}],"termid":"GO:0075130"}


id: PBO:0054953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2367","termid":"PBO:0054953"}


id: GO:0071122
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to vascular endothelial growth factor A.","definition_xrefs":["PMID:17363377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha9-beta1 integrin-VEGF-A complex","synonyms":[{"name":"ITGA9-ITGB1-VEGFA complex","type":"narrow"}],"termid":"GO:0071122"}


id: MONDO:0015019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An an autoinflammatory disease characterized by periodic fever, dermatitis, arthritis, and swelling of the distal extremities, as well as gastrointestinal and sicca-like symptoms. The disorder is associated with specific NOD2 variants.","definition_xrefs":["OMIM:617321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yao syndrome","secondary_identifiers":["SCTID:768667002","UMLS:C4310620","MEDGEN:934587"],"synonyms":[{"name":"YAOS","type":"exact"},{"name":"Yao syndrome","type":"exact"}],"termid":"MONDO:0015019","xrefs":{"Monarch":{"xref_id":"0015019"}}}


id: GO:0071018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that contains the U12, U5 and U6atac snRNPs bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the U12, U5 and U6atac snRNPs.","definition_xrefs":["ISBN:0879695897","GOC:krc","ISBN:0879697393","PMID:16201866","GOC:ab","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U12-type spliceosomal complex","termid":"GO:0005689"},{"relation_name":"is_a","term_name":"catalytic step 2 spliceosome","termid":"GO:0071013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U12-type catalytic step 2 spliceosome","synonyms":[{"name":"AT-AC catalytic step 2 spliceosome","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex C","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex C1","type":"narrow"},{"name":"minor catalytic step 2 spliceosome","type":"exact"},{"name":"yeast U12-type spliceosomal complex A2-2","type":"narrow"}],"termid":"GO:0071018"}


id: GO:0043291
data:
  {"annotated_genes":["SJAG_03219","SJAG_04454","SJAG_00301"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72447,109955,110115],"is_not":false,"summary":null,"term":"GO:0043291"}]},"cv_name":"cellular_component","definition":"A multisubunit complex that in Saccharomyces is composed of three subunits, Rav1p, Rav2p and Skp1p. Acts transiently to catalyze assembly of cytoplasmic V1, with membrane embedded V0 to form the V-ATPase holoenzyme.","definition_xrefs":["PMID:11844802","PMID:11283612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_03219":null,"SJAG_04454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"RAVE complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulator of the (H+)-ATPase of the vacuolar and endosomal membranes","type":"broad"}],"termid":"GO:0043291","terms_by_termid":{"GO:0043291":null}}


id: MONDO:1012025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory distress syndrome, non-human animal","termid":"MONDO:1011923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory distress syndrome, pig","secondary_identifiers":["OMIA:000101-9823"],"termid":"MONDO:1012025","xrefs":{"Monarch":{"xref_id":"1012025"}}}


id: GO:0097489
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the multivesicular body internal vesicle.","definition_xrefs":["PMID:21183070","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle lumen","termid":"GO:0031983"},{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"multivesicular body, internal vesicle","termid":"GO:0097487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005768","GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"multivesicular body, internal vesicle lumen","termid":"GO:0097489"}


id: GO:1900742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to pH.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900741"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:0036177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to pH","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to pH","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to pH","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to pH","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to pH","type":"narrow"}],"termid":"GO:1900742"}


id: MONDO:0004568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ileus caused by abdominal or pelvic surgery, infections, disorders that affect the muscles and nerves, and medications. Signs and symptoms include those of intestinal obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ileus","termid":"MONDO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"paralytic ileus","secondary_identifiers":["UMLS:C0030446","icd11.foundation:1868011045","MESH:D007418","MEDGEN:18293","HP:0002590","SCTID:55525008","DOID:8442","ICD9:560.1","NCIT:C93045"],"synonyms":[{"name":"paralytic ileus","type":"exact"},{"name":"paralytic ileus (disease)","type":"exact"}],"termid":"MONDO:0004568","xrefs":{"Monarch":{"xref_id":"0004568"}}}


id: GO:1900937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"positive regulation of nonadec-1-ene metabolic process","termid":"GO:1900934"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene biosynthetic process","termid":"GO:1900935"},{"relation_name":"positively_regulates","term_name":"nonadec-1-ene biosynthetic process","termid":"GO:1900877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nonadec-1-ene biosynthetic process","synonyms":[{"name":"activation of nonadec-1-ene anabolism","type":"exact"},{"name":"activation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"activation of nonadec-1-ene biosynthetic process","type":"narrow"},{"name":"activation of nonadec-1-ene formation","type":"exact"},{"name":"activation of nonadec-1-ene synthesis","type":"exact"},{"name":"positive regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"positive regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"positive regulation of nonadec-1-ene formation","type":"exact"},{"name":"positive regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"up regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"up regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"up regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"up regulation of nonadec-1-ene formation","type":"exact"},{"name":"up regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"up-regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"up-regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"up-regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"up-regulation of nonadec-1-ene formation","type":"exact"},{"name":"up-regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"upregulation of nonadec-1-ene anabolism","type":"exact"},{"name":"upregulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"upregulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"upregulation of nonadec-1-ene formation","type":"exact"},{"name":"upregulation of nonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900937"}


id: PBO:0012559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sequence feature","termid":"PBO:0012559"}


id: PBO:0018277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med4","termid":"PBO:0018277"}


id: PBO:0067764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 64","termid":"PBO:0067764"}


id: MONDO:0000351
data:
  {"annotated_genes":["SJAG_03556","SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100255"},{"annotations":[86711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013404"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of methionine catabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of methionine cycle and sulfur amino acid metabolism","termid":"MONDO:0019222"},{"relation_name":"is_a","term_name":"inborn disorder of aspartate family metabolism","termid":"MONDO:0037938"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01070":null,"SJAG_03556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"disorder of methionine catabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0003235","MEDGEN:887708","NANDO:2200475","SCTID:43123004","DOID:0050544","UMLS:C4048705"],"synonyms":[{"name":"hypermethioninemia","type":"exact"},{"name":"inborn error of methionine catabolic process","type":"exact"},{"name":"inborn methionine catabolic process disorder","type":"exact"},{"name":"rare inborn error of methionine catabolic process","type":"exact"}],"termid":"MONDO:0000351","terms_by_termid":{"MONDO:0013404":null,"MONDO:0100255":null},"xrefs":{"Monarch":{"xref_id":"0000351"}}}


id: MONDO:0957896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A steatotic liver disease characterized by at least one of the five cardiometabolic risk factors for MASLD and alcohol consumption of 140-350g/week (females) or 210-420g/week (males). This disease is distinguished from MASLD by increased alcohol consumption and from ALD by the evidence of one or more of the MASLD cardiometabolic risk factors.","definition_xrefs":["DOID:0070508|PMID:34722187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty liver disease","termid":"MONDO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"metabolic dysfunction and alcohol associated liver disease","secondary_identifiers":["DOID:0070508"],"termid":"MONDO:0957896","xrefs":{"Monarch":{"xref_id":"0957896"}}}


id: PBO:0067932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 234","termid":"PBO:0067932"}


id: SO:0001490
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The status of a whole genome sequence, where the assembly is high quality, closure approaches have been successful for most gaps, misassemblies and low quality regions.","definition_xrefs":["DOI:10.1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"whole_genome_sequence_status","termid":"SO:0001499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noncontiguous_finished","synonyms":[{"name":"non contiguous finished","type":"exact"}],"termid":"SO:0001490"}


id: PR:O74953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uri1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C736.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.07c","synonyms":[{"name":"Spom972h-uri1","type":"exact"}],"termid":"PR:O74953"}


id: PBO:0041749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin binding transcription activator 2","termid":"PBO:0041749"}


id: PR:O74774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An HBS1-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1 alpha-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.01","secondary_identifiers":["UniProtKB:O74774"],"synonyms":[{"name":"SPBC25B2.01","type":"related"},{"name":"Spom972h-HBS1L","type":"exact"}],"termid":"PR:O74774"}


id: MONDO:0044791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare tumor containing unequivocal elements of both hepatocellular and cholangiocarcinoma that are intimately admixed. This tumor should be distinguished from separate hepatocellular carcinoma and cholangiocarcinoma arising in the same liver. The prognosis of this tumor is poor.","definition_xrefs":["NCIT:C3828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma of gallbladder and extrahepatic biliary tract","termid":"MONDO:0018536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"combined hepatocellular carcinoma and cholangiocarcinoma","secondary_identifiers":["Orphanet:529852","SCTID:274902006","icd11.foundation:1600108866","UMLS:C0221287","GARD:22200","icd11.foundation:1097637010","MEDGEN:113160"],"synonyms":[{"name":"Cholangiohepatoma","type":"exact"},{"name":"Hepatocholangiocarcinoma","type":"exact"},{"name":"Mixed hepatocellular cholangiocarcinoma","type":"exact"},{"name":"carcinoma of liver and intrahepatic biliary tract","type":"broad"},{"name":"carcinoma of the liver and intrahepatic biliary tract","type":"exact"},{"name":"combined hepatocellular cancer and cholangiocarcinoma (bile duct cancer)","type":"exact"},{"name":"combined hepatocellular cancer and intrahepatic bile duct cancer (cholangiocarcinoma)","type":"exact"},{"name":"combined hepatocellular carcinoma and cholangiocarcinoma","type":"exact"},{"name":"liver and intrahepatic biliary tract carcinoma","type":"broad"}],"termid":"MONDO:0044791","xrefs":{"Monarch":{"xref_id":"0044791"}}}


id: GO:1905020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of methionine-tRNA ligase activity.","definition_xrefs":["GOC:TermGenie","PMID:1665486","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of methionine-tRNA ligase activity (obsolete GO:1905020)","synonyms":[{"name":"activation of L-methionine:tRNAMet ligase (AMP-forming)","type":"narrow"},{"name":"activation of MetRS activity","type":"narrow"},{"name":"activation of methionine translase activity","type":"narrow"},{"name":"activation of methionine-tRNA ligase activity","type":"narrow"},{"name":"activation of methionyl-tRNA synthetase activity","type":"narrow"},{"name":"activation of methionyl-transfer RNA synthetase activity","type":"narrow"},{"name":"activation of methionyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"activation of methionyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"positive regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of MetRS activity","type":"exact"},{"name":"positive regulation of methionine translase activity","type":"exact"},{"name":"positive regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"positive regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"positive regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"up regulation of MetRS activity","type":"exact"},{"name":"up regulation of methionine translase activity","type":"exact"},{"name":"up regulation of methionine-tRNA ligase activity","type":"exact"},{"name":"up regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"up regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"up regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up-regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of MetRS activity","type":"exact"},{"name":"up-regulation of methionine translase activity","type":"exact"},{"name":"up-regulation of methionine-tRNA ligase activity","type":"exact"},{"name":"up-regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"up-regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"upregulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"upregulation of MetRS activity","type":"exact"},{"name":"upregulation of methionine translase activity","type":"exact"},{"name":"upregulation of methionine-tRNA ligase activity","type":"exact"},{"name":"upregulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"upregulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"upregulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905020"}


id: GO:1903856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cytokinin dehydrogenase activity.","definition_xrefs":["GOC:TermGenie","PMID:25535363","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytokinin dehydrogenase activity (obsolete GO:1903856)","synonyms":[{"name":"regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of cytokinin oxidase activity","type":"related"}],"termid":"GO:1903856"}


id: GO:1900369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of post-transcriptional gene silencing by RNA.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:22412382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-transcriptional gene silencing","termid":"GO:0060149"},{"relation_name":"is_a","term_name":"negative regulation of gene silencing by regulatory ncRNA","termid":"GO:0060967"},{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing by regulatory ncRNA","termid":"GO:1900368"},{"relation_name":"negatively_regulates","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of post-transcriptional gene silencing by regulatory ncRNA","synonyms":[{"name":"down regulation of RNA interference","type":"exact"},{"name":"down regulation of RNAi","type":"exact"},{"name":"down-regulation of RNA interference","type":"exact"},{"name":"down-regulation of RNAi","type":"exact"},{"name":"downregulation of RNA interference","type":"exact"},{"name":"downregulation of RNAi","type":"exact"},{"name":"inhibition of RNA interference","type":"narrow"},{"name":"inhibition of RNAi","type":"exact"},{"name":"negative regulation of PTGS","type":"exact"},{"name":"negative regulation of RNA interference","type":"exact"},{"name":"negative regulation of RNAi","type":"exact"},{"name":"negative regulation of post-transcriptional gene silencing by RNA","type":"related"},{"name":"negative regulation of post-transcriptional gene silencing by ncRNA","type":"related"},{"name":"negative regulation of posttranscriptional gene silencing by siRNA","type":"narrow"}],"termid":"GO:1900369"}


id: GO:0006684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingomyelin metabolic process","synonyms":[{"name":"sphingomyelin metabolism","type":"exact"}],"termid":"GO:0006684"}


id: PBO:0066740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 37","termid":"PBO:0066740"}


id: PBO:0072755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 5","termid":"PBO:0072755"}


id: GO:0097247
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to epigallocatechin 3-gallate, a compound that is a gallic acid ester of a catechin.","definition_xrefs":["GOC:sl","PMID:21307292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid binding","termid":"GO:0097243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"epigallocatechin 3-gallate binding","synonyms":[{"name":"EGCG binding","type":"exact"},{"name":"catechin gallate binding","type":"broad"}],"termid":"GO:0097247"}


id: PBO:0065455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 2 pseudogene 1","termid":"PBO:0065455"}


id: PBO:0068381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 182","termid":"PBO:0068381"}


id: GO:0071153
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the guanine nucleotide exchange factor synembrin with the alpha(o) subunit of a heterotrimeric G protein.","definition_xrefs":["GOC:mah","PMID:12509430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"G-protein alpha(o)-synembrin complex","synonyms":[{"name":"Ric-8A G(o) alpha-1 subunit complex","type":"narrow"},{"name":"Ric-8A G(o) alpha-2 subunit complex","type":"narrow"}],"termid":"GO:0071153"}


id: GO:0048680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of axon regeneration.","definition_xrefs":["GOC:lm","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of axon regeneration","termid":"GO:0048679"},{"relation_name":"is_a","term_name":"positive regulation of neuron projection regeneration","termid":"GO:0070572"},{"relation_name":"is_a","term_name":"positive regulation of response to wounding","termid":"GO:1903036"},{"relation_name":"positively_regulates","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axon regeneration","synonyms":[{"name":"activation of axon regeneration","type":"narrow"},{"name":"stimulation of axon regeneration","type":"narrow"},{"name":"up regulation of axon regeneration","type":"exact"},{"name":"up-regulation of axon regeneration","type":"exact"},{"name":"upregulation of axon regeneration","type":"exact"}],"termid":"GO:0048680"}


id: GO:0034325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a decyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"decanoyltransferase activity","termid":"GO:0034328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"O-decanoyltransferase activity","termid":"GO:0034325"}


id: GO:0001808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IV hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IV hypersensitivity","termid":"GO:0001807"},{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"negatively_regulates","term_name":"type IV hypersensitivity","termid":"GO:0001806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IV hypersensitivity","synonyms":[{"name":"down regulation of type IV hypersensitivity","type":"exact"},{"name":"down-regulation of type IV hypersensitivity","type":"exact"},{"name":"downregulation of type IV hypersensitivity","type":"exact"},{"name":"inhibition of type IV hypersensitivity","type":"narrow"}],"termid":"GO:0001808"}


id: MONDO:0004944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the brain or spinal cord by Treponema pallidum. It occurs many years following the original infection which remained untreated. Signs and symptoms include abnormal gait, blindness, depression, paralysis, seizures and dementia.","definition_xrefs":["NCIT:C84935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tertiary syphilis","termid":"MONDO:0004497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurosyphilis","secondary_identifiers":["MEDGEN:14360","ICD10CM:A52.3","MESH:D009494","DOID:9988","ICD9:094.89","SCTID:26039008","GARD:8729","UMLS:C0027927","ICD9:094.9","icd11.foundation:2118246468","ICD9:094"],"synonyms":[{"name":"late neurosyphilis","type":"exact"},{"name":"neurosyphilis","type":"exact"},{"name":"tertiary neurosyphilis","type":"exact"}],"termid":"MONDO:0004944","xrefs":{"Monarch":{"xref_id":"0004944"}}}


id: FYPO:0000369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells do not contain vacuoles.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"vacuoles absent","synonyms":[{"name":"absent vacuolar morphology","type":"exact"},{"name":"vacuolar morphology: absent","type":"related"},{"name":"vacuoles absent during mitotic cell cycle","type":"related"},{"name":"vacuoles absent during vegetative growth","type":"exact"}],"termid":"FYPO:0000369"}


id: PBO:0028507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_splicing_at_cryptic_splice_sites","termid":"PBO:0028507"}


id: PBO:0063072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papilin, proteoglycan like sulfated glycoprotein","termid":"PBO:0063072"}


id: GO:0009532
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteinaceous ground substance of plastids.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid stroma","termid":"GO:0009532"}


id: PBO:0051558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL10RB divergent transcript","termid":"PBO:0051558"}


id: GO:0038082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate, where the MAP kinase (MAPK) is part of a MAPK signaling cascade that passes on a signal within an osmosensory signaling pathway.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase phosphatase activity involved in regulation of osmosensory signaling pathway (obsolete GO:0038082)","synonyms":[{"name":"Hog1 phosphatase activity","type":"narrow"},{"name":"MAP kinase phosphatase activity involved in regulation of osmosensory signalling pathway","type":"exact"},{"name":"MAPK phosphatase activity involved in regulation of osmosensory signaling pathway","type":"exact"}],"termid":"GO:0038082"}


id: PBO:0050338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 40","termid":"PBO:0050338"}


id: PBO:0091678
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defect in gene Silencing at centromeric Heterochromatin","termid":"PBO:0091678"}


id: PBO:0024810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_influenced_by","termid":"PBO:0024810"}


id: PBO:0039972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 3","termid":"PBO:0039972"}


id: MONDO:0060768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic nodular lesion that arises from the gingiva. It is composed of epithelial cells lining connective tissue stroma.","definition_xrefs":["NCIT:C4693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epulis","termid":"MONDO:0003396"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingival fibroepithelial polyp","secondary_identifiers":["SCTID:235001002","MEDGEN:98314","UMLS:C0399441","icd11.foundation:1520492305"],"synonyms":[{"name":"fibroepithelial polyp of gingiva","type":"exact"},{"name":"fibroepithelial polyp of gum","type":"exact"},{"name":"fibroepithelial polyp of the gingiva","type":"exact"},{"name":"fibroepithelial polyp of the gum","type":"exact"},{"name":"gingival fibroepithelial polyp","type":"exact"},{"name":"gum fibroepithelial polyp","type":"exact"}],"termid":"MONDO:0060768","xrefs":{"Monarch":{"xref_id":"0060768"}}}


id: GO:1990204
data:
  {"annotated_genes":["SJAG_MIT03","SJAG_01490","SJAG_06382","SJAG_02158","SJAG_02646","SJAG_04675","SJAG_00080","SJAG_01077","SJAG_02901","SJAG_03861","SJAG_00260","SJAG_00976","SJAG_03163","SJAG_01671","SJAG_03337","SJAG_03641","SJAG_02504","SJAG_MIT04","SJAG_02464","SJAG_00885","SJAG_03290","SJAG_MIT20","SJAG_00755","SJAG_07007","SJAG_05629","SJAG_01190","SJAG_04677","SJAG_03920","SJAG_01355","SJAG_01763","SJAG_02006","SJAG_02398","SJAG_07006","SJAG_03064","SJAG_MIT13","SJAG_03490","SJAG_00866","SJAG_00601","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74038,77763,87209,57687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005960"},{"annotations":[77700,77323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"},{"annotations":[71470,106534,64012,70099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045252"},{"annotations":[73196,74419,87213,94796,72569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045254"},{"annotations":[88603,75821,76479,74446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045273"},{"annotations":[71916,75402,73465,61677,117480,103869,118849,113192,75503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045275"},{"annotations":[67542,89010,118871,71637,74094,114015,115249,114447,108079,118822,118844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045277"},{"annotations":[76272,107053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005971"}]},"cv_name":"cellular_component","definition":"Any protein complex that possesses oxidoreductase activity.","definition_xrefs":["GOC:bhm","PMID:18982432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00260":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00866":null,"SJAG_00885":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_01763":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02398":null,"SJAG_02464":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02901":null,"SJAG_03064":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_03641":null,"SJAG_03861":null,"SJAG_03920":null,"SJAG_04665":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_05629":null,"SJAG_06382":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"oxidoreductase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"oxidation-reduction complex","type":"exact"},{"name":"redox complex","type":"exact"}],"termid":"GO:1990204","terms_by_termid":{"GO:0005960":null,"GO:0005971":null,"GO:0033573":null,"GO:0045252":null,"GO:0045254":null,"GO:0045273":null,"GO:0045275":null,"GO:0045277":null}}


id: PBO:0088707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP Gyp2","termid":"PBO:0088707"}


id: GO:0044546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the NLRP3 inflammasome complex, occurring at the level of an individual cell.","definition_xrefs":["PMID:21048113","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex assembly","termid":"GO:0140632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"NLRP3 inflammasome complex assembly","synonyms":[{"name":"NALP3 inflammasome complex assembly","type":"exact"},{"name":"NLRP3 inflammasome activation","type":"related"}],"termid":"GO:0044546"}


id: PBO:0042828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin 1","termid":"PBO:0042828"}


id: FYECO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which N-acetyl-L-cysteine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ N-acetyl-L-cysteine","synonyms":[{"name":"NAC added","type":"exact"},{"name":"acetylcysteine added","type":"exact"}],"termid":"FYECO:0000119"}


id: GO:0000786
data:
  {"annotated_genes":["SJAG_01873","SJAG_00303","SJAG_03942","SJAG_00336","SJAG_00307","SJAG_00302","SJAG_03941","SJAG_03542","SJAG_03543","SJAG_00335","SJAG_03047"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60247,60855,72946,73609,76494,112365,112366,112391,112392],"is_not":false,"summary":null,"term":"GO:0000786"},{"annotations":[101858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043505"},{"annotations":[119388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140573"}]},"cv_name":"cellular_component","definition":"A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00303":null,"SJAG_00307":null,"SJAG_00335":null,"SJAG_00336":null,"SJAG_01873":null,"SJAG_03047":null,"SJAG_03542":null,"SJAG_03543":null,"SJAG_03941":null,"SJAG_03942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"nucleosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:24184107":null},"secondary_identifiers":["GO:0005718","Wikipedia:Nucleosome","GO:0000788","GO:0000787"],"synonyms":[{"name":"cytoplasmic nucleosome","type":"narrow"},{"name":"nuclear nucleosome","type":"narrow"}],"termid":"GO:0000786","terms_by_termid":{"GO:0000786":null,"GO:0043505":null,"GO:0140573":null}}


id: GO:0034641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular nitrogen compound metabolic process (obsolete GO:0034641)","synonyms":[{"name":"cellular nitrogen compound metabolism","type":"exact"}],"termid":"GO:0034641"}


id: PBO:0046865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase domain containing 2C, pseudogene","termid":"PBO:0046865"}


id: PATO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A balance quality inhering in a bearer by virtue of the bearer's having balance.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"balance","termid":"PATO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"balanced","termid":"PATO:0000757"}


id: GO:0002607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"},{"relation_name":"regulates","term_name":"myeloid dendritic cell antigen processing and presentation","termid":"GO:0002469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell antigen processing and presentation","termid":"GO:0002607"}


id: PBO:0030238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_CDRE_promoter_in_response_to_calcium_ion","termid":"PBO:0030238"}


id: MONDO:0003839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm of the ovary with an invasive epithelial component and a fibrotic stroma. The epithelial component is characterized by the presence of malignant epithelial cells with intracytoplasmic mucin. Cystic spaces are also present which contain mucoid material.","definition_xrefs":["NCIT:C40034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinofibroma","termid":"MONDO:0002991"},{"relation_name":"is_a","term_name":"mucinous ovarian cancer","termid":"MONDO:0024282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian mucinous adenocarcinofibroma","secondary_identifiers":["ICDO:9015/3","MEDGEN:384497","UMLS:C2212014","DOID:6278"],"synonyms":[{"name":"ovarian mucinous adenocarcinofibroma","type":"exact"},{"name":"ovarian mucinous malignant adenofibroma","type":"exact"}],"termid":"MONDO:0003839","xrefs":{"Monarch":{"xref_id":"0003839"}}}


id: PBO:0053732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 951","termid":"PBO:0053732"}


id: PR:000028932
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tpx1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:22245228","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin tpx1","synonyms":[{"name":"Peroxiredoxin tsa1","type":"exact"},{"name":"TPX1","type":"related"},{"name":"TSA1","type":"related"},{"name":"Thioredoxin peroxidase","type":"exact"},{"name":"tpx1","type":"exact"}],"termid":"PR:000028932"}


id: MONDO:0015619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A urogenital tract malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic urogenital tract malformation (obsolete MONDO:0015619)","secondary_identifiers":["Orphanet:165704"],"synonyms":[{"name":"isolated urogenital tract malformation","type":"exact"},{"name":"nonsyndromic urogenital tract malformation","type":"exact"}],"termid":"MONDO:0015619","xrefs":{"Monarch":{"xref_id":"0015619"}}}


id: FYPO:0000887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000874"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 dimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000887"}


id: PBO:0064058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 92","termid":"PBO:0064058"}


id: FYPO:0002230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, has a larger volume than normal, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable curved vegetative cell","termid":"FYPO:0002113"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable swollen curved vegetative cell","synonyms":[{"name":"inviable curved cell with increased cell size","type":"related"},{"name":"inviable curved cell with increased cell volume","type":"exact"},{"name":"inviable enlarged curved cell","type":"related"},{"name":"inviable large curved cell","type":"related"},{"name":"inviable swollen curved cell","type":"exact"},{"name":"inviable swollen curved cell during vegetative growth","type":"exact"},{"name":"inviable swollen curved inviable cell","type":"exact"},{"name":"inviable swollen curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; swollen curved vegetative cell","type":"exact"}],"termid":"FYPO:0002230"}


id: GO:1990276
data:
  {"annotated_genes":["SJAG_00559"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107832],"is_not":false,"summary":null,"term":"GO:1990276"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the 5'-gamma-phosphate in an RNA molecule.","definition_xrefs":["GOC:vw","GOC:al","PMID:22740346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00559":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"RNA 5'-gamma-phosphate methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA 5'-methyltransferase activity","type":"related"}],"termid":"GO:1990276","terms_by_termid":{"GO:1990276":null}}


id: MONDO:0042982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder arising from deficiency in the GATA2 with a wide spectrum of phenotypes. Autosomal dominant mutations of GATA2 cause a haploinsufficiency, which, in consequence, cause individuals to develop hematological, immunological, lymphatic, or other presentations. These often progress to severe organ (e.g. lung) failure, opportunistic infections, myelodysplastic syndrome, and/or acute myeloid leukemia. The most common clinical denominator is the propensity for myeloid neoplasia (myelodysplastic syndrome [MDS], myeloproliferative neoplasms [MPN], chronic myelomonocytic leukemia [CMML], acute myeloid leukemia [AML]).","definition_xrefs":["PMID:28637621","PMID:25397911","PMID:25624456","PMID:25619630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"GATA2 deficiency with susceptibility to MDS/AML","secondary_identifiers":["NCIT:C126349"],"synonyms":[{"name":"GATA2 deficiency","type":"exact"},{"name":"GATA2 deficiency with susceptibility to MDS/AML","type":"exact"},{"name":"GATA2 deficiency/MonoMac syndrome","type":"narrow"}],"termid":"MONDO:0042982","xrefs":{"Monarch":{"xref_id":"0042982"}}}


id: FYPO:0006778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the septin ring does not associate with the prospore membrane during prospore membrane formation and closure. Normally, the septin ring forms in close association with the assembling prospore membrane.","definition_xrefs":["PMID:20123972","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore formation","termid":"FYPO:0000196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000121","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"prospore formation with septin ring dissociated from prospore membrane","synonyms":[{"name":"forespore formation with septin ring dissociated from FSM","type":"exact"},{"name":"forespore formation with septin ring dissociated from forespore membrane","type":"exact"},{"name":"prospore septin ring dissociated from prospore membrane","type":"exact"},{"name":"septin ring separated from FSM","type":"exact"}],"termid":"FYPO:0006778"}


id: GO:0004989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine octopamine to initiate a change in cell activity. Octopamine is found in both vertebrates and invertebrates and can have properties both of a hormone and a neurotransmitter and acts as an adrenergic agonist.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"octopamine receptor activity","termid":"GO:0004989"}


id: GO:0015936
data:
  {"annotated_genes":["SJAG_02247","SJAG_01139","SJAG_00427","SJAG_04288","SJAG_03715","SJAG_04627","SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59200],"is_not":false,"summary":null,"term":"GO:0015936"},{"annotations":[70894,78386,71089,79773,89163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[77847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00427":null,"SJAG_01139":null,"SJAG_02247":null,"SJAG_03715":null,"SJAG_04288":null,"SJAG_04627":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"coenzyme A metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006763"],"synonyms":[{"name":"CoA metabolism","type":"exact"},{"name":"coenzyme A metabolism","type":"exact"}],"termid":"GO:0015936","terms_by_termid":{"GO:0015936":null,"GO:0015937":null,"GO:0015938":null}}


id: MONDO:0016394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sporadic infantile bilateral necrosis is the sporadic form of infantile bilateral striatal necrosis (IBSN), a syndrome of bilateral symmetric spongy degeneration of the caudate nucleaus, putamen and globus pallidus characterized by developmental regression, choreoathetosis and dystonia progressing to spastic quadriparesis.","definition_xrefs":["Orphanet:225147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile bilateral striatal necrosis","termid":"MONDO:0015518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"sporadic infantile bilateral striatal necrosis","secondary_identifiers":["icd11.foundation:1174703901","ICD10CM:G23.2","UMLS:C4087175","MEDGEN:1672494","GARD:20549"],"synonyms":[{"name":"ABSN","type":"exact"},{"name":"acute bilateral striatal necrosis","type":"exact"},{"name":"sporadic IBSN","type":"exact"},{"name":"sporadic infantile striatonigral degeneration","type":"exact"},{"name":"sporadic infantile striatonigral necrosis","type":"exact"}],"termid":"MONDO:0016394","xrefs":{"Monarch":{"xref_id":"0016394"}}}


id: GO:0051136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer T cell differentiation.","definition_xrefs":["ISBN:0781735149","PMID:9133426","PMID:12154375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"regulates","term_name":"NK T cell differentiation","termid":"GO:0001865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NK T cell differentiation","synonyms":[{"name":"regulation of NK T cell development","type":"related"},{"name":"regulation of NK T lymphocyte differentiation","type":"exact"},{"name":"regulation of NK T-cell differentiation","type":"exact"},{"name":"regulation of NK T-lymphocyte differentiation","type":"exact"},{"name":"regulation of NKT cell differentiation","type":"exact"},{"name":"regulation of NT cell differentiation","type":"exact"},{"name":"regulation of natural T cell differentiation","type":"exact"},{"name":"regulation of natural killer T cell differentiation","type":"exact"}],"termid":"GO:0051136"}


id: PBO:0017664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug114","termid":"PBO:0017664"}


id: FYPO:0003402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to osmotic stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to osmotic stress","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to osmotic stress","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to osmotic stress during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to osmotic stress","type":"exact"}],"termid":"FYPO:0003402"}


id: PBO:0080627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 74","termid":"PBO:0080627"}


id: GO:0004417
data:
  {"annotated_genes":["SJAG_00381"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65488],"is_not":false,"summary":null,"term":"GO:0004417"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-(2-hydroxyethyl)-4-methylthiazole + ATP = 4-methyl-5-(2-phosphoethyl)-thiazole + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.50","RHEA:24212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxyethylthiazole kinase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:THIAZOLSYN3-RXN","KEGG_REACTION:R04448"],"synonyms":[{"name":"4-methyl-5-(beta-hydroxyethyl)thiazole kinase activity","type":"related"},{"name":"ATP:4-methyl-5-(2-hydroxyethyl)thiazole 2-phosphotransferase activity","type":"related"},{"name":"hydroxyethylthiazole kinase (phosphorylating)","type":"related"}],"termid":"GO:0004417","terms_by_termid":{"GO:0004417":null}}


id: FYPO:0004430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins earlier than normal, e.g. before the mitotic spindle has completely disassembled. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["GO:1902404","PMID:19029336","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0004803","FYPO:0005447","FYPO:0000032"],"is_obsolete":false,"name":"premature actomyosin contractile ring contraction","synonyms":[{"name":"advanced actomyosin contractile ring contraction","type":"exact"},{"name":"decreased dwell time before actomyosin contractile ring contraction","type":"exact"},{"name":"premature actomyosin contractile ring constriction","type":"exact"},{"name":"premature actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"premature actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"premature contractile ring contraction","type":"exact"},{"name":"premature cytokinetic contractile ring contraction","type":"exact"},{"name":"premature mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"premature mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0004430"}


id: FYPO:0002141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) at a low temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal cell population growth at low temperature","synonyms":[{"name":"normal growth at low temperature","type":"broad"},{"name":"normal vegetative cell population growth at low temperature","type":"exact"}],"termid":"FYPO:0002141"}


id: MONDO:0100107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-neonatal early-onset epileptic encephalopathy is a form an of age-related epileptic encephalopathies, characterized by the onset of seizures later than the first 4 weeks of life but within the first three months. Seizures can be generalized or lateralized, independent of the sleep cycle and can occur multiple times per day, leading to psychomotor impairment and death.","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"non-neonatal early infantile epileptic encephalopathy","termid":"MONDO:0100107","xrefs":{"Monarch":{"xref_id":"0100107"}}}


id: PBO:0070454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 11","termid":"PBO:0070454"}


id: GO:0150201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transport across blood-brain barrier.","definition_xrefs":["PMID:30280653","GOC:bc","GOC:aruk","PMID:29377008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"},{"relation_name":"part_of","term_name":"positive regulation of vascular permeability","termid":"GO:0043117"},{"relation_name":"positively_regulates","term_name":"transport across blood-brain barrier","termid":"GO:0150104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of transport across blood-brain barrier","termid":"GO:0150201"}


id: PBO:0068500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 86, pseudogene","termid":"PBO:0068500"}


id: PR:P36630
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2/mitotic-specific cyclin-B2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01138","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/mitotic-specific cyclin cig2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.03","secondary_identifiers":["UniProtKB:P36630"],"synonyms":[{"name":"Spom972h-CCNB2","type":"exact"}],"termid":"PR:P36630"}


id: MONDO:0015434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 18 syndrome is an autosomal anomaly characterized by variable clinical features, most commonly including hypotonia, neonatal feeding and respiratory difficulties, microcephaly, global developmental delay and intellectual disability, growth hormone deficiency, hypothyroidism, hearing loss, aural atresia, dysmorphic facial features and behavioral characteristics.","definition_xrefs":["Orphanet:1442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"},{"relation_name":"is_a","term_name":"chromosome 18 disorder","termid":"MONDO:0700125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 18","secondary_identifiers":["UMLS:C0265475","MEDGEN:539285","GARD:6077","MESH:C538304","SCTID:88154004","NORD:943"],"synonyms":[{"name":"Chromosome 18 Ring","type":"exact"},{"name":"R18","type":"related"},{"name":"Ring 18","type":"related"},{"name":"Ring chromosome 18 syndrome","type":"related"},{"name":"Ring chromosome type 18","type":"exact"},{"name":"chromosome 18 ring","type":"related"}],"termid":"MONDO:0015434","xrefs":{"Monarch":{"xref_id":"0015434"}}}


id: PBO:0002659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tel2/Rad-5/Clk-2 family protein Tel2","termid":"PBO:0002659"}


id: PBO:0034219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mesoparasite_of","termid":"PBO:0034219"}


id: MONDO:0021455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the neck.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"neoplasm of neck","termid":"MONDO:0021351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of neck","secondary_identifiers":["SCTID:92246000","ICD9:229.8","NCIT:C4884","UMLS:C0684815","MEDGEN:195775"],"synonyms":[{"name":"benign neck neoplasm","type":"exact"},{"name":"benign neck tumor","type":"exact"},{"name":"benign neck tumour","type":"exact"},{"name":"benign neoplasm of the neck","type":"exact"},{"name":"benign tumor of neck","type":"exact"},{"name":"benign tumor of the neck","type":"exact"},{"name":"benign tumour of neck","type":"exact"},{"name":"benign tumour of the neck","type":"exact"},{"name":"neck benign neoplasm","type":"exact"}],"termid":"MONDO:0021455","xrefs":{"Monarch":{"xref_id":"0021455"}}}


id: GO:0071367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brassinosteroid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to brassinosteroid","termid":"GO:0009741"},{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to brassinosteroid stimulus","termid":"GO:0071367"}


id: GO:1901563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a camptothecin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to camptothecin","synonyms":[{"name":"response to CPT","type":"exact"}],"termid":"GO:1901563"}


id: PBO:0057974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689f","termid":"PBO:0057974"}


id: GO:1901126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of candicidin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"candicidin metabolic process","termid":"GO:1901125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"candicidin catabolic process","synonyms":[{"name":"candicidin breakdown","type":"exact"},{"name":"candicidin catabolism","type":"exact"},{"name":"candicidin degradation","type":"exact"}],"termid":"GO:1901126"}


id: FYPO:0007350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region on chromosome 2.","definition_xrefs":["PMID:31811152","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 2","synonyms":[{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"},{"name":"decreased homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"}],"termid":"FYPO:0007350"}


id: PR:P0CT35
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-2 gene.","definition_xrefs":["UniProtKB:P0CT35","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-2 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.08","synonyms":[{"name":"Spom972h-Tf2-2","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT35"}


id: GO:0046387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyribose 1,5-bisphosphate, the diphosphorylated sugar 1,5-diphospho-2-deoxyribose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate metabolic process","termid":"GO:0019692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose 1,5-bisphosphate metabolic process","synonyms":[{"name":"deoxyribose 1,5-bisphosphate metabolism","type":"exact"}],"termid":"GO:0046387"}


id: GO:0072102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the glomerulus are generated and organized. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerulus morphogenesis","termid":"GO:0072102"}


id: PBO:0055170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2594","termid":"PBO:0055170"}


id: PBO:0086662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified based on comparisons of the genome sequences of six Saccharomyces species; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0086662"}


id: PBO:0042876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 144","termid":"PBO:0042876"}


id: PBO:0062346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily K member 5 pseudogene","termid":"PBO:0062346"}


id: PBO:0006165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_extension","termid":"PBO:0006165"}


id: MONDO:1010931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polymyositis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymyositis, non-human animal","termid":"MONDO:1010203"},{"relation_name":"is_a","term_name":"myopathy, dog","termid":"MONDO:1010917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymyositis, dog","secondary_identifiers":["OMIA:001874-9615"],"termid":"MONDO:1010931","xrefs":{"Monarch":{"xref_id":"1010931"}}}


id: PBO:0079583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 4","termid":"PBO:0079583"}


id: GO:0035747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a natural killer cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["CL:0000623","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell chemotaxis","termid":"GO:0035747"}


id: MONDO:0023099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAXD syndrome","secondary_identifiers":["GARD:2377"],"synonyms":[{"name":"FRAXD","type":"related"}],"termid":"MONDO:0023099","xrefs":{"Monarch":{"xref_id":"0023099"}}}


id: PBO:0048871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A4 pseudogene 2","termid":"PBO:0048871"}


id: GO:0040008
data:
  {"annotated_genes":["SJAG_01456","SJAG_02838","SJAG_03486","SJAG_04322","SJAG_03581","SJAG_02392","SJAG_03705","SJAG_00216","SJAG_02723","SJAG_00244","SJAG_02169","SJAG_04724","SJAG_00514","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89652,94371,95639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[106653,103283,116272,110554,87844,99543,117700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[90519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[106453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030307"},{"annotations":[114841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"},{"annotations":[98233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061387"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development.","definition_xrefs":["GOC:ems","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"growth","termid":"GO:0040007"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_01456":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02723":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03602":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0040008","terms_by_termid":{"GO:0030307":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061387":null}}


id: MONDO:0018975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinically heterogeneous, neurocutaneous genetic disorder characterized by cafe-au-lait spots, iris Lisch nodules, axillary and inguinal freckling, and multiple neurofibromas.","definition_xrefs":["Orphanet:636"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"obsolete Moyamoya syndrome (obsolete MONDO:0018792)","termid":"MONDO:0018792"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"excluded_subClassOf","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"RASopathy","termid":"MONDO:0021060"},{"relation_name":"is_a","term_name":"neurofibromatosis","termid":"MONDO:0021061"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neurofibromatosis type 1","secondary_identifiers":["NANDO:1200225","ICD9:237.71","NANDO:1200226","NORD:1502","DECIPHER:15","icd11.foundation:337970533","NCIT:C3273","SCTID:92824003","DOID:0111253","GARD:7866","MedDRA:10047712","NANDO:2100287","MEDGEN:18013","OMIM:162200","UMLS:C0027831","MESH:D009456","NANDO:2201003","MESH:C538607"],"synonyms":[{"name":"NF1","type":"exact"},{"name":"Neurofibromatosis 1","type":"exact"},{"name":"Nf1-Microdeletion syndrome","type":"exact"},{"name":"Recklinghausen's disease","type":"related"},{"name":"Von Recklinghausen disease","type":"related"},{"name":"neurofibromatosis","type":"broad"},{"name":"neurofibromatosis 1","type":"exact"},{"name":"neurofibromatosis type 1","type":"exact"},{"name":"neurofibromatosis type 1 microdeletion syndrome","type":"related"},{"name":"neurofibromatosis type i","type":"exact"},{"name":"neurofibromatosis, peripheral type","type":"related"},{"name":"neurofibromatosis, type 1","type":"exact"},{"name":"neurofibromatosis, type I","type":"related"},{"name":"nonmosaic NF1","type":"exact"},{"name":"nonmosaic neurofibromatosis type 1","type":"exact"},{"name":"peripheral neurofibromatosis","type":"exact"},{"name":"type 1 neurofibromatosis","type":"related"},{"name":"von Reklinghausen disease","type":"related"}],"termid":"MONDO:0018975","xrefs":{"Monarch":{"xref_id":"0018975"}}}


id: MONDO:0006217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the gallbladder. It is characterized by the presence of glandular and squamous malignant epithelial components.","definition_xrefs":["NCIT:C7356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"},{"relation_name":"is_a","term_name":"gallbladder squamous cell carcinoma","termid":"MONDO:0006220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gallbladder adenosquamous carcinoma","secondary_identifiers":["EFO:1000264","DOID:5627","UMLS:C1333741","MEDGEN:232539","ONCOTREE:GBASC"],"synonyms":[{"name":"GBASC","type":"related"},{"name":"adenosquamous carcinoma of gallbladder","type":"exact"},{"name":"adenosquamous carcinoma of the gallbladder","type":"exact"},{"name":"adenosquamous gallbladder carcinoma","type":"exact"},{"name":"gall bladder adenosquamous carcinoma","type":"exact"},{"name":"gallbladder adenosquamous cancer","type":"exact"},{"name":"gallbladder adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0006217","xrefs":{"Monarch":{"xref_id":"0006217"}}}


id: GO:0048358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the pectin component of mucilage.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin biosynthetic process","termid":"GO:0045489"},{"relation_name":"is_a","term_name":"mucilage pectin metabolic process","termid":"GO:0048363"},{"relation_name":"part_of","term_name":"mucilage biosynthetic process","termid":"GO:0010192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"mucilage pectin biosynthetic process","synonyms":[{"name":"mucilage pectin anabolism","type":"exact"},{"name":"mucilage pectin biosynthesis","type":"exact"},{"name":"mucilage pectin formation","type":"exact"},{"name":"mucilage pectin synthesis","type":"exact"}],"termid":"GO:0048358"}


id: PBO:0080729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWC2 antisense RNA 1","termid":"PBO:0080729"}


id: PBO:0089291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon Rtn1","termid":"PBO:0089291"}


id: GO:0120046
data:
  {"annotated_genes":["SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to a medial cortical node.","definition_xrefs":["PMID:19474789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to medial cortex","termid":"GO:0106011"},{"relation_name":"regulates","term_name":"protein localization to medial cortical node","termid":"GO:1902577"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to medial cortical node","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120046","terms_by_termid":{"GO:0120047":null}}


id: MONDO:0020722
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86294,86295],"is_not":false,"summary":null,"term":"MONDO:0020722"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"},{"relation_name":"is_a","term_name":"nephrolithiasis, calcium oxalate","termid":"MONDO:0957318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrolithiasis susceptibility caused by SLC26A1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1830325","OMIM:167030","UMLS:C5779632","DOID:0080652"],"synonyms":[{"name":"CAON","type":"related"},{"name":"nephrolithiasis, calcium oxalate","type":"related"},{"name":"urolithiasis, calcium oxalate","type":"related"}],"termid":"MONDO:0020722","terms_by_termid":{"MONDO:0020722":null},"xrefs":{"Monarch":{"xref_id":"0020722"}}}


id: PBO:0057026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR124-2 host gene","termid":"PBO:0057026"}


id: PR:O74765
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proline--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.03","secondary_identifiers":["UniProtKB:O74765"],"synonyms":[{"name":"ProRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PARS2","type":"exact"},{"name":"prolyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74765"}


id: PBO:0040880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 5","termid":"PBO:0040880"}


id: GO:0034312
data:
  {"annotated_genes":["SJAG_03098","SJAG_03275","SJAG_02305","SJAG_04178","SJAG_01057","SJAG_02429","SJAG_02706","SJAG_00880"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109507,96699,78715,76677,105789,73528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"},{"annotations":[69673,108321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a diol, any alcohol containing two hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01057":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_03098":null,"SJAG_03275":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"diol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"dihydric alcohol biosynthetic process","type":"exact"},{"name":"diol anabolism","type":"exact"},{"name":"diol biosynthesis","type":"exact"},{"name":"diol formation","type":"exact"},{"name":"diol synthesis","type":"exact"}],"termid":"GO:0034312","terms_by_termid":{"GO:0006729":null,"GO:0046512":null}}


id: GO:0048400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intermediate mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate specification","termid":"GO:0048337"},{"relation_name":"is_a","term_name":"regulation of intermediate mesodermal cell fate specification","termid":"GO:0048399"},{"relation_name":"positively_regulates","term_name":"intermediate mesodermal cell fate specification","termid":"GO:0048398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intermediate mesodermal cell fate specification","synonyms":[{"name":"activation of intermediate mesodermal cell fate specification","type":"narrow"},{"name":"stimulation of intermediate mesodermal cell fate specification","type":"narrow"},{"name":"up regulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"up-regulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"upregulation of intermediate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048400"}


id: PBO:0053956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1262","termid":"PBO:0053956"}


id: MONDO:0008166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovalocytosis, hereditary hemolytic, with defective erythropoiesis","secondary_identifiers":["MEDGEN:322255","MESH:C563479","OMIM:166910","UMLS:C1833689"],"synonyms":[{"name":"ovalocytosis, hereditary hemolytic, with defective erythropoiesis","type":"exact"}],"termid":"MONDO:0008166","xrefs":{"Monarch":{"xref_id":"0008166"}}}


id: GO:0030083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pigment protein complex that forms part of the photosystem I associated light-harvesting complex I; contains two proteins (usually about 24 and 21.5 kDa); has a fluorescence maximum between 680 and 690 nm.","definition_xrefs":["PMID:8825475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PSI associated light-harvesting complex I","termid":"GO:0009518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PSI associated light-harvesting complex I, LHCIa subcomplex","termid":"GO:0030083"}


id: PBO:0086803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YDL057W is not an essential gene","termid":"PBO:0086803"}


id: PBO:0001405
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"targets correlated with Clr3 and Sir2 targets","termid":"PBO:0001405"}


id: PBO:0084495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein involved in meiotic recombination; involved in DMC1-dependent meiotic recombination; forms heterodimer with Sae3p; proposed to be an assembly factor for Dmc1p","termid":"PBO:0084495"}


id: PBO:0079889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine phosphorylase 2","termid":"PBO:0079889"}


id: PBO:0046359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha pseudogene 1","termid":"PBO:0046359"}


id: PBO:0049284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 3","termid":"PBO:0049284"}


id: GO:0015807
data:
  {"annotated_genes":["SJAG_03256","SJAG_04588","SJAG_03970","SJAG_02605","SJAG_00991","SJAG_02716","SJAG_04725","SJAG_02029","SJAG_03400","SJAG_00626","SJAG_04637","SJAG_05346","SJAG_00522","SJAG_03899","SJAG_00543","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902475"},{"annotations":[100160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[97151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[103623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[63278,98624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[96352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[98024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[103624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901481"},{"annotations":[103625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[96353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"},{"annotations":[97152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[103626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[100161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[102595,103627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[97153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[109822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[103629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[65244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015825"},{"annotations":[103630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[107702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"},{"annotations":[87879],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[98679,93131,110333,91537],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[98680,93132,91538],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[93133],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[63276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015828"}]},"cv_name":"biological_process","definition":"The directed movement of L-enantiomer amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00991":null,"SJAG_02029":null,"SJAG_02605":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03591":null,"SJAG_03899":null,"SJAG_03970":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04725":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015807","terms_by_termid":{"GO:0015813":null,"GO:0015825":null,"GO:0015828":null,"GO:0070778":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0097638":null,"GO:0097639":null,"GO:0110141":null,"GO:1901481":null,"GO:1901482":null,"GO:1902475":null,"GO:1903826":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1990575":null,"GO:1990818":null}}


id: MONDO:0015210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A gastroduodenal malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic gastroduodenal malformation (obsolete MONDO:0015210)","secondary_identifiers":["Orphanet:108965"],"synonyms":[{"name":"syndrome associated with gastroduodenal malformation","type":"exact"},{"name":"syndromic gastroduodenal malformation","type":"exact"}],"termid":"MONDO:0015210","xrefs":{"Monarch":{"xref_id":"0015210"}}}


id: FYPO:0007415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere maintenance, i.e. any process that contributes to the maintenance of proper telomeric length and structure, is abnormal.","definition_xrefs":["PomBase:mah","GO:0000723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolism phenotype","termid":"FYPO:0000293"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"abnormal telomere maintenance","synonyms":[{"name":"telomere maintenance defects","type":"exact"}],"termid":"FYPO:0007415"}


id: PBO:0048236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 5","termid":"PBO:0048236"}


id: PBO:0057275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 498","termid":"PBO:0057275"}


id: PBO:0081111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAND2A pseudogene 2","termid":"PBO:0081111"}


id: GO:0031330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular catabolic process (obsolete GO:0031330)","synonyms":[{"name":"down regulation of cellular catabolic process","type":"exact"},{"name":"down-regulation of cellular catabolic process","type":"exact"},{"name":"downregulation of cellular catabolic process","type":"exact"},{"name":"inhibition of cellular catabolic process","type":"narrow"},{"name":"negative regulation of cellular breakdown","type":"exact"},{"name":"negative regulation of cellular catabolism","type":"exact"},{"name":"negative regulation of cellular degradation","type":"exact"}],"termid":"GO:0031330"}


id: MONDO:0011103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the GJB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 3A","secondary_identifiers":["UMLS:C2675750","GARD:9933","OMIM:601544","MESH:C567277","MEDGEN:436512","DOID:0110564"],"synonyms":[{"name":"DFNA3","type":"narrow"},{"name":"DFNA3A","type":"narrow"},{"name":"GJB2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"NSRD1","type":"narrow"},{"name":"autosomal dominant deafness 3A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 3A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in GJB2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 3A","type":"narrow"},{"name":"deafness, autosomal dominant 3A","type":"narrow"},{"name":"deafness, autosomal dominant 3a","type":"narrow"},{"name":"deafness, autosomal dominant nonsyndromic sensorineural 3","type":"narrow"},{"name":"deafness, autosomal dominant type 3A","type":"narrow"},{"name":"neurosensory nonsyndromic dominant deafness 1","type":"narrow"}],"termid":"MONDO:0011103","xrefs":{"Monarch":{"xref_id":"0011103"}}}


id: MONDO:0003483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastric squamous cell carcinoma (obsolete MONDO:0003483)","termid":"MONDO:0003483","xrefs":{"Monarch":{"xref_id":"0003483"}}}


id: GO:0051590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter transport","termid":"GO:0051588"},{"relation_name":"positively_regulates","term_name":"neurotransmitter transport","termid":"GO:0006836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of neurotransmitter transport","synonyms":[{"name":"activation of neurotransmitter transport","type":"narrow"},{"name":"stimulation of neurotransmitter transport","type":"narrow"},{"name":"up regulation of neurotransmitter transport","type":"exact"},{"name":"up-regulation of neurotransmitter transport","type":"exact"},{"name":"upregulation of neurotransmitter transport","type":"exact"}],"termid":"GO:0051590"}


id: PBO:0030851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_content","termid":"PBO:0030851"}


id: PBO:0046770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 10","termid":"PBO:0046770"}


id: PBO:0053727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 941","termid":"PBO:0053727"}


id: MOD:01556
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01556"}


id: MONDO:0003150
data:
  {"annotated_genes":["SJAG_04176","SJAG_02690","SJAG_01941","SJAG_00997","SJAG_03051","SJAG_00377","SJAG_02223","SJAG_04324","SJAG_01465","SJAG_01837","SJAG_04885","SJAG_03635","SJAG_02500","SJAG_02006","SJAG_05196","SJAG_02339","SJAG_02035","SJAG_00663","SJAG_04663","SJAG_00786","SJAG_03698","SJAG_03418","SJAG_02463","SJAG_02294","SJAG_03286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87111,87112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"},{"annotations":[87008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013901"},{"annotations":[86983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014961"},{"annotations":[85185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054725"},{"annotations":[85015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054726"},{"annotations":[86206,86205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054732"},{"annotations":[86607,86608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011720"},{"annotations":[84966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009461"},{"annotations":[85875,85876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030507"},{"annotations":[85893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030515"},{"annotations":[86885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030733"},{"annotations":[86748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030787"},{"annotations":[85767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024773"},{"annotations":[85784,85788,85783,85782,85785,85786,85787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"},{"annotations":[85513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030869"}]},"cv_name":"mondo","definition":"A disease involving the male reproductive system.","direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_00663":null,"SJAG_00786":null,"SJAG_00997":null,"SJAG_01465":null,"SJAG_01837":null,"SJAG_01941":null,"SJAG_02006":null,"SJAG_02035":null,"SJAG_02223":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02463":null,"SJAG_02500":null,"SJAG_02690":null,"SJAG_03051":null,"SJAG_03286":null,"SJAG_03418":null,"SJAG_03635":null,"SJAG_03698":null,"SJAG_04176":null,"SJAG_04324":null,"SJAG_04663":null,"SJAG_04885":null,"SJAG_05196":null},"genotype_count":0,"is_obsolete":false,"name":"male reproductive system disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:608.9","MESH:D005832","NCIT:C27019","SCTID:363194005","EFO:0009555","MEDGEN:66734","DOID:48","ICD10CM:N40-N53","ICD9:600-608.99","UMLS:C0236099","ICD10WHO:N40-N51"],"synonyms":[{"name":"Male reproductive system disease","type":"exact"},{"name":"Male reproductive system disorder","type":"exact"},{"name":"disease of male reproductive system","type":"exact"},{"name":"disease or disorder of male reproductive system","type":"exact"},{"name":"disorder of Male reproductive system","type":"exact"},{"name":"disorder of male reproductive system","type":"exact"},{"name":"male reproductive disease","type":"exact"},{"name":"male reproductive system disease","type":"exact"},{"name":"male reproductive system disease or disorder","type":"exact"}],"termid":"MONDO:0003150","terms_by_termid":{"MONDO:0009461":null,"MONDO:0010767":null,"MONDO:0011720":null,"MONDO:0013872":null,"MONDO:0013901":null,"MONDO:0014961":null,"MONDO:0024773":null,"MONDO:0030507":null,"MONDO:0030515":null,"MONDO:0030733":null,"MONDO:0030787":null,"MONDO:0030869":null,"MONDO:0054725":null,"MONDO:0054726":null,"MONDO:0054732":null},"xrefs":{"Monarch":{"xref_id":"0003150"}}}


id: PR:Q9UUK3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An OTU domain-containing protein 6B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin thioesterase otu2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.03","secondary_identifiers":["UniProtKB:Q9UUK3"],"synonyms":[{"name":"OTU domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC1952.03","type":"related"},{"name":"Spom972h-OTUD6B","type":"exact"}],"termid":"PR:Q9UUK3"}


id: PBO:0084264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral inner mitochondrial membrane protein; role in maintaining mitochondrial nucleoid structure and number; mutants exhibit an increased rate of mitochondrial DNA escape; shows some sequence similarity to exonucleases","termid":"PBO:0084264"}


id: PBO:0091890
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin-associated Methyltransferase Complex subunit","termid":"PBO:0091890"}


id: PBO:0111934
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family 6","termid":"PBO:0111934"}


id: PBO:0044316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-245 beta chain","termid":"PBO:0044316"}


id: PBO:0053889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1169","termid":"PBO:0053889"}


id: MONDO:0044727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma with a poor prognosis, characterized by the presence of a mixture of exocrine and neuroendocrine malignant epithelial cells in both the pancreas and metastatic sites. Symptoms include jaundice, abdominal pain, and weight loss.","definition_xrefs":["NCIT:C45843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"},{"relation_name":"is_a","term_name":"digestive system mixed adenoneuroendocrine carcinoma","termid":"MONDO:0006182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic carcinoma with mixed differentiation","secondary_identifiers":["UMLS:C1709050","GARD:22057","Orphanet:506112","MEDGEN:353935"],"synonyms":[{"name":"MiNEN of pancreas","type":"exact"},{"name":"mixed exocrine-endocrine carcinoma of the pancreas","type":"exact"},{"name":"mixed neuroendocrine-nonneuroendocrine neoplasm of pancreas","type":"related"},{"name":"pancreatic MiNEN","type":"exact"},{"name":"pancreatic carcinoma with mixed differentiation","type":"exact"},{"name":"pancreatic mixed neuroendocrine-nonneuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0044727","xrefs":{"Monarch":{"xref_id":"0044727"}}}


id: GO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which ferric-hydroxamate, the iron-bound form of the iron chelator hydroxamate, is transported into the cell by specific cell surface receptors.","definition_xrefs":["PMID:23192658","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-dependent iron import into cell","termid":"GO:0033214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0098771"],"is_obsolete":false,"name":"ferric-hydroxamate import into cell","synonyms":[{"name":"ferric-hydroxamate transport","type":"broad"}],"termid":"GO:0015687"}


id: PBO:0030800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cortical_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030800"}


id: PR:O94302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RFT1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13117:SF5","PRO:DNx","OMA:SCHPO03770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharide translocation protein rft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.19","secondary_identifiers":["UniProtKB:O94302"],"synonyms":[{"name":"Spom972h-RFT1","type":"exact"}],"termid":"PR:O94302"}


id: PBO:0067322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 413, pseudogene","termid":"PBO:0067322"}


id: PBO:0081693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 615","termid":"PBO:0081693"}


id: PBO:0075742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 68 pseudogene 1","termid":"PBO:0075742"}


id: GO:0106193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic cations and their chelates linked to the hydrolysis of a diphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic cations and their chelates linked to the hydrolysis of a diphosphate (obsolete GO:0106193)","termid":"GO:0106193"}


id: PBO:0075952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducing adaptor molecule","termid":"PBO:0075952"}


id: GO:0140107
data:
  {"annotated_genes":["SJAG_02883","SJAG_01353"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70346,72128],"is_not":false,"summary":null,"term":"GO:0140107"}]},"cv_name":"molecular_function","definition":"Enables the transfer of potassium ions from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:10629185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity potassium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0140107","terms_by_termid":{"GO:0140107":null}}


id: GO:0010994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating free ubiquitin chains, compounds composed of a large number of ubiquitin monomers. These chains are not conjugated to a protein.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"},{"relation_name":"part_of","term_name":"ubiquitin recycling","termid":"GO:0010992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"free ubiquitin chain polymerization","termid":"GO:0010994"}


id: PBO:0044800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 4A","termid":"PBO:0044800"}


id: MONDO:0011677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Megarbane syndrome","secondary_identifiers":["MESH:C536145","MEDGEN:339864","OMIM:606527","UMLS:C1847871"],"synonyms":[{"name":"Megarbane syndrome","type":"exact"},{"name":"short stature, abnormal face, joint laxity, hernias, delayed bone age, and severe psychomotor retardation","type":"related"}],"termid":"MONDO:0011677","xrefs":{"Monarch":{"xref_id":"0011677"}}}


id: GO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates transcription such that the target genes are transcribed as part of the G2 phase of the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in G2-phase of mitotic cell cycle (obsolete GO:0000116)","synonyms":[{"name":"G2-specific transcription in mitotic cell cycle","type":"related"},{"name":"regulation of transcription from RNA polymerase II during G2-phase of mitotic cell cycle","type":"related"},{"name":"regulation of transcription involved in G2-phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000116"}


id: PBO:0041616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CABP1 divergent transcript","termid":"PBO:0041616"}


id: GO:1902985
data:
  {"annotated_genes":["SJAG_02607","SJAG_02074","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103116,110355,114815],"is_not":false,"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"Any pre-replicative complex assembly involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex assembly involved in nuclear cell cycle DNA replication","termid":"GO:0006267"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0065003","GO:0007049","GO:0044085","GO:0006260"],"is_obsolete":false,"name":"mitotic pre-replicative complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear pre-replicative complex assembly involved in mitotic cell cycle","type":"exact"},{"name":"pre-replicative complex assembly involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902985","terms_by_termid":{"GO:1902985":null}}


id: GO:1904067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ascr#2.","definition_xrefs":["PMID:22665789","GOC:TermGenie","GO_REF:0000067","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ascr#2 binding","termid":"GO:1904067"}


id: PBO:0065879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB30, member RAS oncogene family","termid":"PBO:0065879"}


id: PBO:0005558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-binding dehydrogenase (predicted)","termid":"PBO:0005558"}


id: FYPO:0000809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion organization is abnormal. Mitochondrion organization results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion, and includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome, as well as synthesis of new mitochondrial components.","definition_xrefs":["PomBase:mah","GO:0007005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitochondrion organization","synonyms":[{"name":"abnormal mitochondrion organisation","type":"exact"},{"name":"abnormal mitochondrion organization during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrion organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000809"}


id: PBO:0046145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 6","termid":"PBO:0046145"}


id: PBO:0050815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrogen voltage gated channel 1","termid":"PBO:0050815"}


id: GO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"RNA polymerase V is a multisubunit RNA polymerase complex found in the nucleus of plants and involved in accumulation of siRNAs and in DNA methylation-dependent silencing of endogenous repeated sequences. Pol V is composed of subunits that are paralogous or identical to the 12 subunits of Pol II. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The second largest subunit is also found in RNA polymerase IVa, while the largest subunit is found only in the IVa complex and contains an extended C-terminal domain (CTD) that includes multiple repeats of a 16 amino-acid consensus sequence as well as other sequences. The remainder of the complex is composed of smaller subunits.","definition_xrefs":["PMID:19110459","GOC:mtg_sensu","GOC:krc","PMID:16140984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase V complex","secondary_identifiers":["GO:0080137"],"synonyms":[{"name":"DNA-directed RNA polymerase IVb complex","type":"exact"},{"name":"DNA-directed RNA polymerase V complex","type":"exact"}],"termid":"GO:0000419"}


id: GO:0070177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of water from a contractile vacuole to the outside of a cell by fusion of the contractile vacuole membrane with the plasma membrane.","definition_xrefs":["PMID:10369671","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"contractile vacuole discharge","termid":"GO:0070177"}


id: PBO:0068581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 32, pseudogene","termid":"PBO:0068581"}


id: PR:O42873
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc201 gene.","definition_xrefs":["UniProtKB:O42873","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase C3G9.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.11c","synonyms":[{"name":"Spom972h-pdc201","type":"exact"}],"termid":"PR:O42873"}


id: PBO:0113452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of EGO/GSE complex; vacuolar/endosomal membrane-associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from endosome to plasma membrane; targeted to vacuole via AP-3 pathway; loss results in defect in vacuolar acidification","termid":"PBO:0113452"}


id: MONDO:0015009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"},{"relation_name":"is_a","term_name":"EPHB4-associated vascular malformation spectrum","termid":"MONDO:0700080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 7","secondary_identifiers":["UMLS:C4310629","MEDGEN:934596","OMIM:617300"],"synonyms":[{"name":"HFASD","type":"exact"},{"name":"hydrops fetalis, nonimmune, and/or atrial septal defect, susceptibility to","type":"exact"},{"name":"hydrops fetalis, nonimmune, and/or atrial septal defect, susceptibility to; HFASD","type":"exact"}],"termid":"MONDO:0015009","xrefs":{"Monarch":{"xref_id":"0015009"}}}


id: PBO:0091775
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SPT8","termid":"PBO:0091775"}


id: GO:0100040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates invasive growth in response to glucose limitation.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invasive growth in response to glucose limitation by transcription from RNA polymerase II promoter (obsolete GO:0100040)","termid":"GO:0100040"}


id: GO:0061322
data:
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id: PBO:0065864
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id: MONDO:0002011
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary angioedema (obsolete MONDO:0002011)","termid":"MONDO:0002011","xrefs":{"Monarch":{"xref_id":"0002011"}}}


id: PBO:0028352
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id: PBO:0086075
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with 8 putative transmembrane segments; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression","termid":"PBO:0086075"}


id: PBO:0000812
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin synthase/ hydrolase fusion protein (predicted)","termid":"PBO:0000812"}


id: MONDO:0015953
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic central nervous system and retinal vascular disease (obsolete MONDO:0015953)","secondary_identifiers":["Orphanet:183503"],"termid":"MONDO:0015953","xrefs":{"Monarch":{"xref_id":"0015953"}}}


id: PBO:0066018
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN, member RAS oncogene family","termid":"PBO:0066018"}


id: PBO:0060569
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 5, pseudogene","termid":"PBO:0060569"}


id: GO:0070012
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a peptide bond in an oligopeptide, i.e. a molecule containing a small number (2 to 20) of amino acid residues connected by peptide bonds.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0003824","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"oligopeptidase activity","termid":"GO:0070012"}


id: GO:0097151
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id: GO:0060619
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within the mammary line that contributes to the formation of the mammary placode.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"},{"relation_name":"part_of","term_name":"mammary placode formation","termid":"GO:0060596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in mammary placode formation","termid":"GO:0060619"}


id: MONDO:0020520
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult pulmonary Langerhans Cell Histiocytosis (PLCH) is a rare histiocytic lung disease characterized by the accumulation of Langerhans and other inflammatory cells in the small airways, resulting in the formation of nodular inflammatory lesions.","definition_xrefs":["Orphanet:99874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Langerhans cell histiocytosis specific to adulthood","termid":"MONDO:0017029"},{"relation_name":"is_a","term_name":"eosinophilic granuloma","termid":"MONDO:0020517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"adult pulmonary Langerhans cell histiocytosis","secondary_identifiers":["MEDGEN:853967","NCIT:C142833","UMLS:C3161104","ICD10CM:J84.82","icd11.foundation:792398738","SCTID:328611000119105"],"synonyms":[{"name":"PLCH","type":"exact"},{"name":"pulmonary Langerhans cell histiocytosis","type":"exact"},{"name":"pulmonary eosinophilic granuloma","type":"exact"},{"name":"pulmonary histiocytosis X","type":"exact"}],"termid":"MONDO:0020520","xrefs":{"Monarch":{"xref_id":"0020520"}}}


id: PBO:0060198
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 20, cell surface associated","termid":"PBO:0060198"}


id: SO:0001183
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence composed of nucleobases bound to a morpholino backbone. A morpholino backbone consists of morpholine (CHEBI:34856) rings connected by phosphorodiamidate linkages.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morpholino_backbone","secondary_identifiers":["http://en.wikipedia.org/wiki/Morpholino"],"synonyms":[{"name":"morpholino backbone","type":"exact"}],"termid":"SO:0001183"}


id: PBO:0048801
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 1","termid":"PBO:0048801"}


id: GO:1900854
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of terrequinone A biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:24066102","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"terrequinone A biosynthetic process","termid":"GO:1900796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of terrequinone A biosynthetic process","secondary_identifiers":["GO:1900852"],"synonyms":[{"name":"regulation of terrequinone A biosynthetic process","type":"broad"},{"name":"up regulation of terrequinone A biosynthetic process","type":"exact"},{"name":"up-regulation of terrequinone A biosynthetic process","type":"exact"},{"name":"upregulation of terrequinone A biosynthetic process","type":"exact"}],"termid":"GO:1900854"}


id: PR:Q9USM7
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim23 gene.","definition_xrefs":["UniProtKB:Q9USM7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.09c","synonyms":[{"name":"Spom972h-tim23","type":"exact"}],"termid":"PR:Q9USM7"}


id: SO:0000846
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is a promoter for RNA polymerase III type 2.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000846 RNApol_III_promoter_type_2_region (obsolete SO:0000846)","termid":"SO:0000846"}


id: GO:1905296
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id: PBO:0029354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromosome_at_long_terminal_repeat","termid":"PBO:0029354"}


id: GO:0102676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: avenasterol + O2 + NADPH + H+ = 5-dehydroavenasterol + 2 H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete avenasterol-desaturase activity (obsolete GO:0102676)","termid":"GO:0102676"}


id: MONDO:0024657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete macrocystic neurilemmoma (obsolete MONDO:0024657)","secondary_identifiers":["NCIT:C5321","DOID:3203"],"termid":"MONDO:0024657","xrefs":{"Monarch":{"xref_id":"0024657"}}}


id: MONDO:0032859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 40","secondary_identifiers":["MEDGEN:1684662","UMLS:C5231451","GARD:18411","OMIM:618664","DOID:0111918"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 40","type":"related"},{"name":"SPGF40","type":"related"}],"termid":"MONDO:0032859","xrefs":{"Monarch":{"xref_id":"0032859"}}}


id: PBO:0051287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-35 (pseudogene)","termid":"PBO:0051287"}


id: PBO:0074334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAL1 antisense RNA 1","termid":"PBO:0074334"}


id: PBO:0003693
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SNT309","termid":"PBO:0003693"}


id: PBO:0064910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 1 like (pseudogene)","termid":"PBO:0064910"}


id: GO:0005093
data:
  {"annotated_genes":["SJAG_02422"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76015],"is_not":false,"summary":null,"term":"GO:0005093"}]},"cv_name":"molecular_function","definition":"Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-dissociation inhibitor activity","termid":"GO:0005092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"Rab GDP-dissociation inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005093","terms_by_termid":{"GO:0005093":null}}


id: GO:0001011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a specific DNA sequence and recruiting RNA polymerase to the DNA in order to form the preinitiation complex (PIC).","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting (obsolete GO:0001011)","synonyms":[{"name":"sequence-specific DNA binding RNA polymerase recruiting transcription factor activity","type":"exact"}],"termid":"GO:0001011"}


id: MONDO:0958260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare group of spinal cord lipoma characterized by the presence of extramedullary lipomatous mass located at any point along the spinal cord with or without a dural defect.","definition_xrefs":["Orphanet:645273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida occulta","termid":"MONDO:0000859"},{"relation_name":"is_a","term_name":"spinal cord lipoma","termid":"MONDO:0001790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"dysraphic spinal cord lipoma","secondary_identifiers":["MEDGEN:1853158","UMLS:C5816731"],"termid":"MONDO:0958260","xrefs":{"Monarch":{"xref_id":"0958260"}}}


id: PBO:0052735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 27","termid":"PBO:0052735"}


id: GO:0051281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"positively_regulates","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of release of sequestered calcium ion into cytosol","synonyms":[{"name":"activation of release of sequestered calcium ion into cytosol","type":"narrow"},{"name":"positive regulation of calcium ion (Ca2+) mobilization","type":"broad"},{"name":"positive regulation of calcium mobilization","type":"broad"},{"name":"positive regulation of cytoplasmic release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of cytoplasmic release of stored calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of cytosolic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of cytosolic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of release of sequestered calcium ion into cytoplasm","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+) into cytoplasm","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+) into cytosol","type":"exact"},{"name":"stimulation of release of sequestered calcium ion into cytosol","type":"narrow"},{"name":"up regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"up-regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"upregulation of release of sequestered calcium ion into cytosol","type":"exact"}],"termid":"GO:0051281"}


id: PR:P0CT40
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-9 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.02c","synonyms":[{"name":"Spom972h-Tf2-9","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT40"}


id: MONDO:0010100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM2 gangliosidosis, variant B or Tay-Sachs disease is marked by accumulation of G2 gangliosides due to hexosaminidase A deficiency.","definition_xrefs":["Orphanet:845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"GM2 gangliosidosis","termid":"MONDO:0017720"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005328","MONDO:0002039","MONDO:0005244","MONDO:0005559","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"Tay-Sachs disease","secondary_identifiers":["SCTID:49562005","MedDRA:10043147","MEDGEN:11713","ICD10CM:E75.02","NORD:1761","NANDO:1200071","NANDO:2201199","UMLS:C0039373","MESH:D013661","GARD:7737","OMIM:272800","icd11.foundation:215008783","NCIT:C85184","DOID:3320","SCTID:111385000"],"synonyms":[{"name":"B variant GM2 gangliosidosis","type":"related"},{"name":"B variant GM2-gangliosidosis","type":"related"},{"name":"GM2 gangliosidosis, B, B1 variant","type":"exact"},{"name":"GM2 gangliosidosis, type 1","type":"related"},{"name":"GM2-gangliosidosis, adult chronic type","type":"related"},{"name":"GM2-gangliosidosis, several forms","type":"exact"},{"name":"GM2-gangliosidosis, type 1","type":"related"},{"name":"GM2-gangliosidosis, variant B1","type":"related"},{"name":"Hex A pseudodeficiency","type":"exact"},{"name":"TAY-Sachs disease","type":"related"},{"name":"TSD","type":"related"},{"name":"Tay Sachs Disease","type":"exact"},{"name":"Tay-Sachs disease","type":"exact"},{"name":"Tay-Sachs disease, juvenile","type":"related"},{"name":"Tay-Sachs disease, pseudo-Ab variant","type":"related"},{"name":"Tay-Sachs disease, variant B1","type":"related"},{"name":"disease, Tay-Sachs","type":"exact"},{"name":"gangliosidosis GM2, type 1","type":"related"},{"name":"hexa deficiency","type":"related"},{"name":"hexosaminidase A deficiency","type":"exact"},{"name":"hexosaminidase a deficiency","type":"related"},{"name":"hexosaminidase a deficiency, adult type","type":"related"},{"name":"hexosaminidase alpha-subunit deficiency (variant B)","type":"related"},{"name":"sphingolipidosis, Tay-Sachs","type":"related"}],"termid":"MONDO:0010100","xrefs":{"Monarch":{"xref_id":"0010100"}}}


id: PBO:0059770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 44","termid":"PBO:0059770"}


id: PBO:0064922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 4","termid":"PBO:0064922"}


id: PBO:0048859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 4","termid":"PBO:0048859"}


id: GO:1900436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:1900434"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:0036170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms in response to starvation","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms in response to starvation","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms in response to starvation","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms in response to starvation","type":"exact"}],"termid":"GO:1900436"}


id: _global:is_consecutive_sequence_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"R is_consecutive_sequence_of R iff every instance of R is equivalent to a collection of instances of U:u1, u2, un, such that no pair of ux uy is overlapping and for all ux, it is adjacent to ux-1 and ux+1, with the exception of the initial and terminal u1,and un (which may be identical).","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_consecutive_sequence_of","termid":"_global:is_consecutive_sequence_of"}


id: GO:0097648
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"}]},"cv_name":"cellular_component","definition":"A protein complex that contains G protein-coupled receptors.","definition_xrefs":["GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"G protein-coupled receptor complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"G-protein coupled receptor complex","type":"exact"}],"termid":"GO:0097648","terms_by_termid":{"GO:0038038":null}}


id: MOD:01520
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A distinct molecular entity produced as the result of a fragmentation process performed on a particular modified residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reporter fragment","termid":"MOD:01519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modification reporter fragment","termid":"MOD:01520"}


id: PR:Q10267
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- upf3 gene.","definition_xrefs":["UniProtKB:Q10267","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsense-mediated mRNA decay protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.03","synonyms":[{"name":"Spom972h-upf3","type":"exact"},{"name":"up-frameshift suppressor 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10267"}


id: PBO:0039722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3C","termid":"PBO:0039722"}


id: MONDO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm arising in the paranasal sinus.","definition_xrefs":["NCIT:C6014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone carcinoma","termid":"MONDO:0002415"},{"relation_name":"is_a","term_name":"paranasal sinus cancer","termid":"MONDO:0020669"},{"relation_name":"is_a","term_name":"nasal cavity and paranasal sinus carcinoma","termid":"MONDO:0056819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paranasal sinus carcinoma","secondary_identifiers":["NCIT:C6019","UMLS:C0854995","DOID:0050619","MEDGEN:167751"],"synonyms":[{"name":"accessory sinus cancer","type":"exact"},{"name":"accessory sinus carcinoma","type":"exact"},{"name":"adenoid cystic carcinoma of accessory sinus","type":"related"},{"name":"adenoid cystic carcinoma of paranasal sinus","type":"related"},{"name":"cancer of paranasal sinus","type":"exact"},{"name":"carcinoma of accessory sinus","type":"exact"},{"name":"carcinoma of paranasal sinus","type":"exact"},{"name":"carcinoma of the accessory sinus","type":"exact"},{"name":"carcinoma of the paranasal sinus","type":"exact"},{"name":"epidermoid carcinoma of the paranasal sinus","type":"related"},{"name":"malignant neoplasm of paranasal sinus","type":"broad"},{"name":"malignant paranasal sinus neoplasm","type":"broad"},{"name":"mucoepidermoid carcinoma of accessory sinus","type":"related"},{"name":"paranasal sinus adenocarcinoma","type":"related"},{"name":"paranasal sinus adenoid cystic carcinoma","type":"related"},{"name":"paranasal sinus cancer","type":"broad"},{"name":"paranasal sinus carcinoma","type":"exact"},{"name":"paranasal sinus mucoepidermoid carcinoma","type":"related"},{"name":"paranasal sinus squamous cell carcinoma","type":"related"},{"name":"squamous cell carcinoma of paranasal sinus","type":"related"}],"termid":"MONDO:0000380","xrefs":{"Monarch":{"xref_id":"0000380"}}}


id: GO:0140587
data:
  {"annotated_genes":["SJAG_00698"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140585"}]},"cv_name":"molecular_function","definition":"Bridging together two DNA loop anchors together, maintaining a chromatin loop.","definition_xrefs":["PMID:32213323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin DNA binding","termid":"GO:0031490"},{"relation_name":"is_a","term_name":"DNA-DNA tethering activity","termid":"GO:0106260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677","GO:0060090"],"is_obsolete":false,"name":"chromatin loop anchoring activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA loop binding","type":"exact"},{"name":"chromosomal loop binding","type":"exact"}],"termid":"GO:0140587","terms_by_termid":{"GO:0140585":null}}


id: PBO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNS domain protein (SMART)","termid":"PBO:0000830"}


id: GO:0015166
data:
  {"annotated_genes":["SJAG_04506","SJAG_03595"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72722,71901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a polyol from one side of a membrane to the other. A polyol is any polyhydric alcohol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"polyol transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-429571"],"synonyms":[{"name":"sugar/polyol channel activity","type":"narrow"}],"termid":"GO:0015166","terms_by_termid":{"GO:0005366":null}}


id: GO:0075320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ascus development, a saclike structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of ascus development","termid":"GO:0075318"},{"relation_name":"negatively_regulates","term_name":"ascus development","termid":"GO:0075317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ascus development","termid":"GO:0075320"}


id: PR:O94440
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC637.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C637.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.03","synonyms":[{"name":"Spom972h-SPAC637.03","type":"exact"}],"termid":"PR:O94440"}


id: PBO:0000546
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Mei4","termid":"PBO:0000546"}


id: GO:0005205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin sulfate/dermatan sulfate proteoglycan (obsolete GO:0005205)","synonyms":[{"name":"chondroitin sulfate/dermatan sulfate proteoglycan","type":"exact"},{"name":"chondroitin sulphate/dermatan sulphate proteoglycan","type":"exact"}],"termid":"GO:0005205"}


id: GO:1905509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an interphase microtubule organizing center.","definition_xrefs":["PMID:19001497","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule organizing center","termid":"GO:1905508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to interphase microtubule organizing center","synonyms":[{"name":"protein localisation in interphase microtubule organizing center","type":"exact"},{"name":"protein localisation to interphase microtubule organizing center","type":"exact"},{"name":"protein localization in interphase microtubule organizing center","type":"exact"}],"termid":"GO:1905509"}


id: MONDO:0017218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Septopreoptic holoprosencephaly (HPE) is a very rare subtype of lobar HPE characterized by midline fusion limited to the septal and/or preoptic regions of the telencephalon without a significant frontal neocortical fusion.","definition_xrefs":["Orphanet:280195"],"gene_count":0,"genotype_count":0,"name":"obsolete septopreoptic holoprosencephaly (obsolete MONDO:0017218)","synonyms":[{"name":"Septopreoptic HPE","type":"exact"}],"termid":"MONDO:0017218","xrefs":{"Monarch":{"xref_id":"0017218"}}}


id: GO:0100061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription factor catabolic process process that negatively regulates SREBP signaling pathway.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by transcription factor catabolic process (obsolete GO:0100061)","termid":"GO:0100061"}


id: MONDO:0018052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypoplastic tibiae-postaxial polydactyly syndrome (obsolete MONDO:0018052)","termid":"MONDO:0018052","xrefs":{"Monarch":{"xref_id":"0018052"}}}


id: PBO:0087709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; involved in glucose repression","termid":"PBO:0087709"}


id: MONDO:0013178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital muscular dystrophy due to LMNA mutation is a rare congenital muscular dystrophy characterized by prominent axial hypotonia, dropped head syndrome, predominantly proximal muscle weakness in upper limbs/distal in lower limbs (with absent, poor or lost motor development), joint contractures (initially distal, later proximal), spine rigidity, and early respiratory insufficiency, in the presence of moderately elevated serum creatine kinase. Cardiac arrhythmias and sudden death have been also reported.","definition_xrefs":["Orphanet:157973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital muscular dystrophy due to LMNA mutation","secondary_identifiers":["MESH:C567708","UMLS:C2750785","OMIM:613205","DOID:0110640","NANDO:2200866","NCIT:C148369","MEDGEN:413043","GARD:12585"],"synonyms":[{"name":"L-CMD","type":"exact"},{"name":"LMNA congenital muscular dystrophy","type":"exact"},{"name":"LMNA-related congenital muscular dystrophy","type":"exact"},{"name":"MDCL","type":"related"},{"name":"congenital muscular dystrophy LMNA-related","type":"exact"},{"name":"congenital muscular dystrophy caused by mutation in LMNA","type":"exact"},{"name":"muscular dystrophy Congenital, LMNA-related","type":"exact"},{"name":"muscular dystrophy, congenital","type":"exact"},{"name":"muscular dystrophy, congenital, LMNA-related","type":"related"}],"termid":"MONDO:0013178","xrefs":{"Monarch":{"xref_id":"0013178"}}}


id: PBO:0060325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin ID","termid":"PBO:0060325"}


id: GO:0018137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl glycine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0241"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via glycine thiazolecarboxylic acid (obsolete GO:0018137)","termid":"GO:0018137"}


id: MONDO:0019662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"short rib-polydactyly syndrome","termid":"MONDO:0015461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short rib-polydactyly syndrome, Majewski type","secondary_identifiers":["ICD9:756.3","GARD:4833","icd11.foundation:132740256","Orphanet:93269","SCTID:72922008"],"synonyms":[{"name":"SRPS type 2","type":"related"},{"name":"polydactyly with neonatal chondrodystrophy type 2","type":"related"},{"name":"short rib-polydactyly syndrome Majewski type","type":"related"},{"name":"short rib-polydactyly syndrome type 2","type":"exact"}],"termid":"MONDO:0019662","xrefs":{"Monarch":{"xref_id":"0019662"}}}


id: PBO:0077909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 antisense RNA 1","termid":"PBO:0077909"}


id: MONDO:0016368
data:
  {"annotated_genes":["SJAG_05329"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86629],"is_not":false,"summary":null,"term":"MONDO:0016368"}]},"cv_name":"mondo","definition":"Rothmund-Thomson syndrome type 1 is a subform of Rothmund-Thomson syndrome (RTS) presenting with a characteristic facial rash (poikiloderma) and frequently associated with short stature, sparse scalp hair, sparse or absent eyelashes and/or eyebrows, and rapidly progressive bilateral juvenile cataracts. In contrast to RTS2, patients with RTS1 do not appear to have an increased risk of developing cancer.","definition_xrefs":["Orphanet:221008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rothmund-Thomson syndrome","termid":"MONDO:0010002"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0019303"],"is_obsolete":false,"name":"Rothmund-Thomson syndrome type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618625","MEDGEN:1684764","UMLS:C5231433","GARD:17134","NCIT:C178826","icd11.foundation:717855330","MONDO:0032840"],"synonyms":[{"name":"Poikiloderma Atrophicans and Cataract","type":"related"},{"name":"ROTHMUND-THOMSON SYNDROME, TYPE 1","type":"related"},{"name":"RTS1","type":"exact"},{"name":"poikiloderma of Rothmund-Thomson type 1","type":"exact"}],"termid":"MONDO:0016368","terms_by_termid":{"MONDO:0016368":null},"xrefs":{"Monarch":{"xref_id":"0016368"}}}


id: PBO:0042942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome alignment maintaining phosphoprotein 1","termid":"PBO:0042942"}


id: PBO:0028459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0028459"}


id: GO:0015960
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015966"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diadenosine polyphosphate, a derivative of the nucleoside adenosine with phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"diadenosine polyphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine polyphosphate anabolism","type":"exact"},{"name":"diadenosine polyphosphate biosynthesis","type":"exact"},{"name":"diadenosine polyphosphate formation","type":"exact"},{"name":"diadenosine polyphosphate synthesis","type":"exact"}],"termid":"GO:0015960","terms_by_termid":{"GO:0015966":null}}


id: FYPO:0005597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome","termid":"FYPO:0004996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to centromere","synonyms":[{"name":"abnormal protein localisation to centromere","type":"exact"},{"name":"abnormal protein localisation to chromosome, centromeric region","type":"exact"},{"name":"abnormal protein localization to chromosome, centric region","type":"exact"},{"name":"abnormal protein localization to chromosome, centromeric region","type":"exact"}],"termid":"FYPO:0005597"}


id: GO:0021987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pallium development","termid":"GO:0021543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex development","synonyms":[{"name":"corticogenesis","type":"narrow"},{"name":"neocortex development","type":"related"}],"termid":"GO:0021987"}


id: MONDO:0017912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked pure spastic paraplegia (obsolete MONDO:0017912)","secondary_identifiers":["Orphanet:320332"],"termid":"MONDO:0017912","xrefs":{"Monarch":{"xref_id":"0017912"}}}


id: PBO:0073321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 4","termid":"PBO:0073321"}


id: PBO:0076391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TACR3 antisense RNA 1","termid":"PBO:0076391"}


id: FYPO:0006810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which large chromosomal rearrangements occur less frequently than in wild type cells. Chromosomal rearrangements may include deletions, duplications, inversions, and translocations.","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased gross chromosomal rearrangement","synonyms":[{"name":"decreased occurrence of gross chromosomal rearrangement","type":"exact"}],"termid":"FYPO:0006810"}


id: MONDO:0000659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heavy chain disease that results from an overproduction of delta antibody (IgD).","definition_xrefs":["DOID:0060129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heavy chain disease","termid":"MONDO:0019464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"delta-heavy chain disease","secondary_identifiers":["MEDGEN:543921","SCTID:20224008","ICD9:203.80","UMLS:C0272253"],"synonyms":[{"name":"IgD heavy chain disease","type":"exact"},{"name":"delta chain disease","type":"exact"},{"name":"delta heavy chain disease","type":"exact"}],"termid":"MONDO:0000659","xrefs":{"Monarch":{"xref_id":"0000659"}}}


id: GO:0018134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl glycine cross-link by the condensation of a serine hydroxyl with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0240"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via glycine oxazolecarboxylic acid (obsolete GO:0018134)","termid":"GO:0018134"}


id: _global:has_target_start_location
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This relationship holds between p and l when p is a transport or localization process in which the outcome is to move some cargo c from some initial location l to some destination.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_transport_to_from_or_in","termid":"_global:results_in_transport_to_from_or_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_target_start_location","secondary_identifiers":["RO:0002338"],"termid":"_global:has_target_start_location"}


id: GO:0071568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of UFM1 from one protein to another via the reaction X-UFM1 + Y = Y-UFM1 + X, where both X-UFM1 and Y-UFM1 are covalent linkages.","definition_xrefs":["GOC:sp","PMID:20018847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0019787","GO:0140096","GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"UFM1 transferase activity","termid":"GO:0071568"}


id: PR:Q9Y7S9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aah3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.02c","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aah3","type":"exact"}],"termid":"PR:Q9Y7S9"}


id: PATO:0001870
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a circular disk by virtue of the bearer's having a segment of another circle removed from its edge, so that what remains is a shape enclosed by two circular arcs of different diameters which intersect at two points (usually in such a manner that the enclosed shape does not include the center of the original circle).","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Crescent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crescent-shaped","secondary_identifiers":["Image:http\\://upload.wikimedia.org/wikipedia/commons/7/74/Crescent.svg"],"synonyms":[{"name":"bow-shaped","type":"related"},{"name":"crescentic","type":"exact"},{"name":"lunate","type":"related"}],"termid":"PATO:0001870"}


id: GO:0009374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"biotin binding","synonyms":[{"name":"vitamin B7 binding","type":"exact"},{"name":"vitamin H binding","type":"exact"}],"termid":"GO:0009374"}


id: PBO:0001010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis II protein Mes1","termid":"PBO:0001010"}


id: GO:0071421
data:
  {"annotated_genes":["SJAG_04096","SJAG_03850","SJAG_01007","SJAG_04867"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61336,63794,70430,108463],"is_not":false,"summary":null,"term":"GO:0071421"}]},"cv_name":"biological_process","definition":"A process in which a manganese ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transport","termid":"GO:0006828"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_03850":null,"SJAG_04096":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"manganese ion transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"manganese ion membrane transport","type":"exact"},{"name":"transmembrane manganese transport","type":"exact"}],"termid":"GO:0071421","terms_by_termid":{"GO:0071421":null}}


id: MONDO:0006510
data:
  {"annotated_genes":["SJAG_03375","SJAG_04335","SJAG_00516","SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"},{"annotations":[86841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010359"},{"annotations":[86474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013782"},{"annotations":[85937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"}]},"cv_name":"mondo","definition":"Genetic defects in the selective or non-selective transport functions of the kidney tubules.","definition_xrefs":["MESH:D015499"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01183":null,"SJAG_03375":null,"SJAG_04335":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal tubular transport disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1000647","DOID:447","UMLS:C0035091","MEDGEN:19728"],"synonyms":[{"name":"disorder of renal absorption","type":"exact"},{"name":"inborn renal tubular transport disorder","type":"exact"},{"name":"kidney tubular transport, inborn error","type":"related"},{"name":"kidney tubular transport, inborn errors","type":"related"},{"name":"renal absorption disease","type":"exact"},{"name":"renal tubular transport errors","type":"related"},{"name":"renal tubular transport, inborn error","type":"related"}],"termid":"MONDO:0006510","terms_by_termid":{"MONDO:0010359":null,"MONDO:0011268":null,"MONDO:0011422":null,"MONDO:0013782":null},"xrefs":{"Monarch":{"xref_id":"0006510"}}}


id: PBO:0000853
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.100","termid":"PBO:0000853"}


id: MONDO:0012841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 5p13.1.","definition_xrefs":["PMID:17447842","DOID:0110888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 18","secondary_identifiers":["MEDGEN:393655","UMLS:C2677090","OMIM:612262","MESH:C567377"],"synonyms":[{"name":"IBD18","type":"exact"},{"name":"inflammatory bowel disease 18","type":"exact"},{"name":"inflammatory bowel disease type 18","type":"exact"}],"termid":"MONDO:0012841","xrefs":{"Monarch":{"xref_id":"0012841"}}}


id: MONDO:0008552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited blood coagulation disease characterized by autosomal dominant inheritance with macrothrombocytopenia, platelet anisocytosis, prolonged bleeding time but only mildly increased bleeding tendency that has material basis in heterozygous mutation in the ITGA2B gene on chromosome 17q21.31 or the ITGB3 gene on chromosome 17q21.32.","definition_xrefs":["DOID:0060691","PMID:9834222","PMID:21454453","PMID:18065693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 16","secondary_identifiers":["MEDGEN:1781222","OMIM:187800","UMLS:C5442010","MESH:C566061"],"synonyms":[{"name":"BDPLT16","type":"related"},{"name":"Glanzmann thrombasthenia, autosomal dominant","type":"related"},{"name":"autosomal dominant Glanzmann thrombasthenia","type":"exact"},{"name":"autosomal dominant thrombasthenia of Glanzmann and Naegeli","type":"exact"},{"name":"bleeding disorder, platelet-type, 16","type":"related"},{"name":"bleeding disorder, platelet-type, 16, autosomal dominant","type":"exact"},{"name":"platelet-type bleeding disorder 16","type":"exact"},{"name":"thrombasthenia of Glanzmann and Naegeli, autosomal dominant","type":"related"}],"termid":"MONDO:0008552","xrefs":{"Monarch":{"xref_id":"0008552"}}}


id: PBO:0043899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 3","termid":"PBO:0043899"}


id: GO:0002946
data:
  {"annotated_genes":["SJAG_05249","SJAG_02099","SJAG_00325","SJAG_01314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90249,105585],"is_not":false,"summary":null,"term":"GO:0002946"},{"annotations":[93723,88051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"}]},"cv_name":"biological_process","definition":"The process whereby a cytosine in a tRNA is methylated at position 5 of the cytosine.","definition_xrefs":["ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00325":null,"SJAG_01314":null,"SJAG_02099":null,"SJAG_05249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA C5-cytosine methylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA 5-methylcytosine biosynthesis","type":"related"}],"termid":"GO:0002946","terms_by_termid":{"GO:0002127":null,"GO:0002946":null}}


id: PR:O43010
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycylpeptide N-tetradecanoyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.11","synonyms":[{"name":"NMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-myr1","type":"exact"},{"name":"myristoyl-CoA:protein N-myristoyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peptide N-myristoyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43010"}


id: PR:O74511
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase 6 regulatory subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04756","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extragenic suppressor of kinetochore protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.01c","secondary_identifiers":["UniProtKB:O74511"],"synonyms":[{"name":"Spom972h-PPP6R3","type":"exact"}],"termid":"PR:O74511"}


id: GO:2000218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of invasive growth in response to glucose limitation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070785"},{"relation_name":"is_a","term_name":"regulation of invasive growth in response to glucose limitation","termid":"GO:2000217"},{"relation_name":"negatively_regulates","term_name":"invasive growth in response to glucose limitation","termid":"GO:0001403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of invasive growth in response to glucose limitation","synonyms":[{"name":"negative regulation of colony morphology","type":"related"}],"termid":"GO:2000218"}


id: GO:0021897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of an astrocyte that resides in the forebrain, from initial commitment of the cell to its fate, to the fully functional differentiated cell. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte development","termid":"GO:0014002"},{"relation_name":"part_of","term_name":"forebrain astrocyte differentiation","termid":"GO:0021896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain astrocyte development","termid":"GO:0021897"}


id: MONDO:0033614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 83, autosomal recessive","secondary_identifiers":["MEDGEN:1759445","UMLS:C5436637","Orphanet:631076","DOID:0112346","OMIM:619027"],"synonyms":[{"name":"SPG83","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 83","type":"exact"}],"termid":"MONDO:0033614","xrefs":{"Monarch":{"xref_id":"0033614"}}}


id: PBO:0064989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRC1 antisense RNA 1","termid":"PBO:0064989"}


id: GO:0031721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a hemoglobin alpha chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemoglobin binding","termid":"GO:0030492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"hemoglobin alpha binding","termid":"GO:0031721"}


id: PBO:0076524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 37 pseudogene","termid":"PBO:0076524"}


id: PBO:0080695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 2B","termid":"PBO:0080695"}


id: GO:0015267
data:
  {"annotated_genes":["SJAG_00133","SJAG_00048","SJAG_00915","SJAG_04122","SJAG_07003","SJAG_02532","SJAG_02877","SJAG_MIT09","SJAG_04731","SJAG_MIT37","SJAG_MIT15","SJAG_00542","SJAG_01090","SJAG_05342","SJAG_01649","SJAG_04471","SJAG_00836","SJAG_02105","SJAG_02598","SJAG_04668","SJAG_02019","SJAG_05229","SJAG_00438","SJAG_04136","SJAG_02322","SJAG_01168","SJAG_02564","SJAG_03114","SJAG_03895","SJAG_00985","SJAG_03925","SJAG_05204"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96914],"is_not":false,"summary":null,"term":"GO:0015267"},{"annotations":[69601,75215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008519"},{"annotations":[72173,114229,77016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005262"},{"annotations":[79635,72821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"},{"annotations":[70175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[99433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[103560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[95477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008381"},{"annotations":[57817,107607,118856,101617,107699,94638,118868,69678,93084,77550,93667,79027,75389,69850,72428,77833,118862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"},{"annotations":[113715,99434,92144,92202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"},{"annotations":[71494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"passive transmembrane transporter activity","termid":"GO:0022803"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01090":null,"SJAG_01168":null,"SJAG_01649":null,"SJAG_02019":null,"SJAG_02105":null,"SJAG_02322":null,"SJAG_02532":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02877":null,"SJAG_03114":null,"SJAG_03895":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04136":null,"SJAG_04471":null,"SJAG_04668":null,"SJAG_04731":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05342":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"channel activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0022838","Reactome:R-HSA-3779381","GO:0015268","Reactome:R-HSA-8953430","GO:0015249","TC:1"],"synonyms":[{"name":"alpha-type channel activity","type":"related"},{"name":"channel-forming toxin activity","type":"related"},{"name":"channel/pore class transporter activity","type":"exact"},{"name":"nonselective channel activity","type":"exact"},{"name":"pore activity","type":"broad"},{"name":"pore class transporter activity","type":"related"},{"name":"substrate-specific channel activity","type":"related"}],"termid":"GO:0015267","terms_by_termid":{"GO:0005227":null,"GO:0005254":null,"GO:0005262":null,"GO:0008308":null,"GO:0008331":null,"GO:0008381":null,"GO:0008519":null,"GO:0015267":null,"GO:0015275":null,"GO:0046933":null,"GO:0140135":null}}


id: PBO:0068385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 186","termid":"PBO:0068385"}


id: GO:0060728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate or frequency of coreceptor activity involved in epidermal growth factor receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060728)","synonyms":[{"name":"negative regulation of Neu/ErbB-2 receptor activity","type":"narrow"},{"name":"negative regulation of coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060728"}


id: GO:0010095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a floral organ primordium acquires petal identity. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of floral organ identity","termid":"GO:0010093"},{"relation_name":"part_of","term_name":"petal formation","termid":"GO:0048451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of petal identity","termid":"GO:0010095"}


id: FYPO:0006178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin cortical patch localization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:11231572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cortical patch localization","termid":"FYPO:0001294"},{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal rate of actin cortical patch localization","synonyms":[{"name":"normal rate of actin cortical patch localisation","type":"exact"},{"name":"normal rate of actin cortical patch localization during mitotic cell cycle","type":"related"},{"name":"normal rate of actin cortical patch localization during vegetative growth","type":"exact"},{"name":"normal rate of actin patch localization","type":"exact"}],"termid":"FYPO:0006178"}


id: PBO:0014586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin H transporter Vht1","termid":"PBO:0014586"}


id: GO:0006941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within striated muscle tissue, resulting in the shortening of the muscle. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope.","definition_xrefs":["ISBN:0198506732","GOC:mtg_muscle","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle contraction","termid":"GO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle contraction","synonyms":[{"name":"sarcomeric muscle contraction","type":"exact"}],"termid":"GO:0006941"}


id: GO:0051201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving a prosthetic group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of prosthetic group metabolic process (obsolete GO:0051201)","synonyms":[{"name":"down regulation of prosthetic group metabolic process","type":"exact"},{"name":"down-regulation of prosthetic group metabolic process","type":"exact"},{"name":"downregulation of prosthetic group metabolic process","type":"exact"},{"name":"inhibition of prosthetic group metabolic process","type":"narrow"},{"name":"negative regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"negative regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"negative regulation of prosthetic group metabolism","type":"exact"}],"termid":"GO:0051201"}


id: GO:0042708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of elastin.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete elastase activity (obsolete GO:0042708)","synonyms":[{"name":"elastase activity","type":"exact"}],"termid":"GO:0042708"}


id: PBO:0009122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-tubulin Gtb1","termid":"PBO:0009122"}


id: PBO:0034078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_apomorphy_relationship_with","termid":"PBO:0034078"}


id: PBO:0070327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 16","termid":"PBO:0070327"}


id: MONDO:0007192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-amino acids, renal transport of","secondary_identifiers":["UMLS:C1862289","MEDGEN:349470","OMIM:109660"],"synonyms":[{"name":"AABT","type":"exact"},{"name":"BETA-amino acids, renal TRANSPORT OF","type":"related"},{"name":"taurine renal reabsorption","type":"related"}],"termid":"MONDO:0007192","xrefs":{"Monarch":{"xref_id":"0007192"}}}


id: MONDO:0012706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A temporal lobe epilepsy characterized by autosomal dominant inheritance of occipitotemporal lobe epilepsy and migraine with visual aura and that has material basis in variation in the chromosome region 9q21-q22.","definition_xrefs":["PMID:17460155","PMID:18332351","DOID:0060753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial temporal lobe epilepsy 4","secondary_identifiers":["UMLS:C1968847","MEDGEN:368897","OMIM:611631","GARD:15523","MESH:C566902"],"synonyms":[{"name":"EPOLM","type":"related"},{"name":"ETL4","type":"exact"},{"name":"epilepsy, familial temporal lobe, 4","type":"related"},{"name":"epilepsy, occipitotemporal lobe, and migraine with aura","type":"related"},{"name":"familial temporal lobe epilepsy type 4","type":"exact"},{"name":"occipitotemporal lobe epilepsy and migraine with aura","type":"related"}],"termid":"MONDO:0012706","xrefs":{"Monarch":{"xref_id":"0012706"}}}


id: GO:0003366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix that contributes to the directed movement of an ameboid cell.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion","termid":"GO:0007160"},{"relation_name":"part_of","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-matrix adhesion involved in ameboidal cell migration","termid":"GO:0003366"}


id: GO:0072022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the descending thin limb over time, from its formation to the mature structure. The descending thin limb is a part of the loop of Henle situated just after the proximal straight tubule (S3). It extends to the tip of the loop of Henle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"loop of Henle development","termid":"GO:0072070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"descending thin limb development","termid":"GO:0072022"}


id: PBO:0003517
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Missegregation and Lethal when Overexpressed","termid":"PBO:0003517"}


id: PBO:0077638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin related transmembrane protein 2 pseudogene 1","termid":"PBO:0077638"}


id: PBO:0004947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim21 (predicted)","termid":"PBO:0004947"}


id: GO:0070672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-15","synonyms":[{"name":"response to IL-15","type":"exact"}],"termid":"GO:0070672"}


id: PBO:0005366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II Gtb1 (predicted)","termid":"PBO:0005366"}


id: MONDO:1011514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma that occurs in owls.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"glaucoma, non-human animal","termid":"MONDO:1011457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, owls","secondary_identifiers":["OMIA:000411-30458"],"termid":"MONDO:1011514","xrefs":{"Monarch":{"xref_id":"1011514"}}}


id: GO:0014883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of conversion of fast-contracting muscle fibers to a slower character. This may involve slowing of contractile rate, slow myosin gene induction, increase in oxidative metabolic properties, altered electrophysiology and altered innervation. This process also regulates skeletal muscle adapatation.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle adaptation","termid":"GO:0014733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transition between fast and slow fiber","synonyms":[{"name":"transition between fast and slow fibre","type":"exact"},{"name":"transition fast-slow fiber","type":"exact"},{"name":"transition fast-slow fibre","type":"exact"}],"termid":"GO:0014883"}


id: GO:0033897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a ribonucleotidyl-ribonucleotide-RNA + H2O = a 3'-end 3'-phospho-ribonucleotide-RNA + a 5'-end dephospho-ribonucleoside-RNA + H+. This reaction is a two-stage endonucleolytic cleavage to nucleoside 3'-phosphates and 3'-phosphooligonucleotides with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["RHEA:68052","EC:4.6.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0140098","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"ribonuclease T2 activity","secondary_identifiers":["MetaCyc:3.1.27.5-RXN"],"synonyms":[{"name":"Escherichia coli ribonuclease I' ribonuclease PP2 activity","type":"exact"},{"name":"Escherichia coli ribonuclease II activity","type":"related"},{"name":"RNAase CL activity","type":"exact"},{"name":"RNase (non-base specific) activity","type":"exact"},{"name":"RNase II activity","type":"broad"},{"name":"RNase M activity","type":"related"},{"name":"RNase Ms activity","type":"exact"},{"name":"RNase T2 activity","type":"related"},{"name":"acid RNase activity","type":"exact"},{"name":"acid ribonuclease activity","type":"exact"},{"name":"base-non-specific ribonuclease activity","type":"exact"},{"name":"non-base specific ribonuclease activity","type":"exact"},{"name":"nonbase-specific RNase activity","type":"exact"},{"name":"nonspecific RNase activity","type":"exact"},{"name":"ribonnuclease (non-base specific) activity","type":"exact"},{"name":"ribonuclease (non-base specific) activity","type":"related"},{"name":"ribonuclease II activity","type":"broad"},{"name":"ribonuclease M activity","type":"exact"},{"name":"ribonuclease N2 activity","type":"exact"},{"name":"ribonuclease PP3 activity","type":"related"},{"name":"ribonuclease U4 activity","type":"exact"},{"name":"ribonucleate 3'-oligonucleotide hydrolase activity","type":"exact"},{"name":"ribonucleate nucleotido-2'-transferase (cyclizing) activity","type":"broad"}],"termid":"GO:0033897"}


id: SO:0000200
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 5' most coding exon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_exon","termid":"SO:0000195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_coding_exon","synonyms":[{"name":"5' coding exon","type":"exact"},{"name":"five prime coding exon","type":"exact"}],"termid":"SO:0000200"}


id: GO:0006118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transport of electrons from an electron donor to an electron acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transport (obsolete GO:0006118)","synonyms":[{"name":"6-phosphofructokinase reduction","type":"related"},{"name":"dihydrobiopterin reduction","type":"related"},{"name":"dihydrolipoamide reduction","type":"related"},{"name":"dihydrolipoylprotein reduction","type":"related"},{"name":"dihydropteridine reduction","type":"related"},{"name":"electron transfer","type":"exact"},{"name":"electron transport","type":"exact"},{"name":"other pathways of electron transport","type":"related"},{"name":"oxidized glutathione reduction","type":"related"},{"name":"protein-disulfide reduction","type":"related"}],"termid":"GO:0006118"}


id: PBO:0046170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELFN1 antisense RNA 1","termid":"PBO:0046170"}


id: GO:0051511
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of unidimensional cell growth, the process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell morphogenesis","termid":"GO:0010771"},{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"negatively_regulates","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of unidimensional cell growth","type":"exact"},{"name":"down-regulation of unidimensional cell growth","type":"exact"},{"name":"downregulation of unidimensional cell growth","type":"exact"},{"name":"inhibition of unidimensional cell growth","type":"narrow"},{"name":"negative regulation of cell elongation","type":"narrow"}],"termid":"GO:0051511","terms_by_termid":{"GO:0051517":null}}


id: PBO:0043649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 8","termid":"PBO:0043649"}


id: PBO:0068349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 126","termid":"PBO:0068349"}


id: MONDO:0020063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformation syndrome with hamartosis (obsolete MONDO:0020063)","secondary_identifiers":["Orphanet:98196"],"synonyms":[{"name":"Dysmorphologic diseases with phakomatosis","type":"exact"}],"termid":"MONDO:0020063","xrefs":{"Monarch":{"xref_id":"0020063"}}}


id: GO:0003173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ventriculo bulbo valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventriculo bulbo valve development","termid":"GO:0003173"}


id: PBO:0051623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin linked kinase","termid":"PBO:0051623"}


id: PR:Q10071
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CAAX prenyl protease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10120:SF17","PRO:DNx","OMA:SCHPO00795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX prenyl protease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.05","secondary_identifiers":["UniProtKB:Q10071"],"synonyms":[{"name":"PPSEP 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ZMPSTE24","type":"exact"},{"name":"prenyl protein-specific endoprotease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10071"}


id: PBO:0057237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 424","termid":"PBO:0057237"}


id: PBO:0058139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4436b-1","termid":"PBO:0058139"}


id: GO:0043637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving puromycin, 3'-deoxy-N,N-dimethyl-3'-(O-methyl-L-tyrosinamido)adenosine, an aminonucleoside antibiotic that is a potent inhibitor of translation; produced by the bacterium Streptomyces alboniger.","definition_xrefs":["Wikipedia:Puromycin","PMID:8226694","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"puromycin metabolic process","synonyms":[{"name":"puromycin metabolism","type":"exact"}],"termid":"GO:0043637"}


id: GO:0072222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric early distal convoluted tubule over time, from its formation to the mature structure. The metanephric early distal convoluted tubule contains metanephric DCT cells and is vasopressin-insensitive.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early distal convoluted tubule development","termid":"GO:0072067"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric early distal convoluted tubule development","termid":"GO:0072222"}


id: PBO:0045444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropyrimidine dehydrogenase","termid":"PBO:0045444"}


id: GO:0047325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 3,4,5,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H+.","definition_xrefs":["RHEA:12452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"inositol-3,4,5,6-tetrakisphosphate 1-kinase activity","secondary_identifiers":["Reactome:R-HSA-1855162","KEGG_REACTION:R03479","EC:2.7.1.134","Reactome:R-HSA-994137","MetaCyc:2.7.1.134-RXN"],"synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 1-kinase activity","type":"related"},{"name":"1D-myo-inositol-trisphosphate 5-kinase activity","type":"related"},{"name":"1D-myo-inositol-trisphosphate 6-kinase activity","type":"related"},{"name":"ATP:1D-myo-inositol-3,4,5,6-tetrakisphosphate 1-phosphotransferase activity","type":"related"},{"name":"inositol 3,4,5,6-tetrakisphosphate 1-kinase activity","type":"exact"},{"name":"inositol tetrakisphosphate 1-kinase activity","type":"broad"},{"name":"inositol-trisphosphate 5-kinase activity","type":"related"},{"name":"inositol-trisphosphate 6-kinase activity","type":"related"}],"termid":"GO:0047325"}


id: GO:0071442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the addition of an acetyl group to histone H3 at position 14 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K14 acetylation (obsolete GO:0071442)","synonyms":[{"name":"activation of histone H3-K14 acetylation","type":"narrow"},{"name":"positive regulation of histone H3 acetylation at K14","type":"exact"},{"name":"positive regulation of histone H3K14 acetylation","type":"exact"},{"name":"stimulation of histone H3-K14 acetylation","type":"narrow"},{"name":"up regulation of histone H3-K14 acetylation","type":"exact"},{"name":"up-regulation of histone H3-K14 acetylation","type":"exact"},{"name":"upregulation of histone H3-K14 acetylation","type":"exact"}],"termid":"GO:0071442"}


id: GO:1900405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of cell separation after cytokinesis.","definition_xrefs":["PMID:10491317","PMID:12665550","GOC:mah","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell separation after cytokinesis by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900405)","synonyms":[{"name":"regulation of cytokinetic cell separation by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:1900405"}


id: PBO:0044540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DXZ4 associated non-coding transcript 1, proximal","termid":"PBO:0044540"}


id: PBO:0053876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1152","termid":"PBO:0053876"}


id: PBO:0082134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin filament binding protein that enhances actin ring formation; IQGAP family member required for assembly and contraction of the AMR, prior to cytokinesis; localizes to the contractile ring during anaphase in an Mlc1p-dependent manner, recruiting Myo1p and Hof1p to the site, and promoting cytokinetic core complex assembly; specifies bud-site selection, localizing axial markers Bud4p and Cdc12p; regulated by Cdc28p; relocalizes from the bud neck to the cytoplasm upon replication stress","termid":"PBO:0082134"}


id: PBO:0108987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 11","termid":"PBO:0108987"}


id: PR:Q9USN0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04485","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.06c","secondary_identifiers":["UniProtKB:Q9USN0"],"synonyms":[{"name":"GPI mannosyltransferase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGB","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USN0"}


id: PBO:0006379
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"confirmed intron","termid":"PBO:0006379"}


id: PBO:0058309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4682","termid":"PBO:0058309"}


id: GO:0061251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric glomerular epithelial cell over time, from its formation to the mature structure. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell development","termid":"GO:0072310"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell development","termid":"GO:0061251"}


id: MONDO:0009727
data:
  {"annotated_genes":["SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86538,86539],"is_not":false,"summary":null,"term":"MONDO:0009727"}]},"cv_name":"mondo","definition":"A lethal perinatal bone dysplasia characterized by limb shortening, normal sized skull with cleft palate, hitchhiker thumbs, distinctive facial dysmorphism and radiographic skeletal features, caused by mutations in the diastrophic dysplasia sulfate transporter gene.","definition_xrefs":["Orphanet:56304"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"atelosteogenesis","termid":"MONDO:0000389"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005497"],"is_obsolete":false,"name":"atelosteogenesis type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:256050","MESH:C535395","GARD:8329","ICD9:756.9","ICD10CM:Q77.5","SCTID:254055004","UMLS:C1850554","MEDGEN:338072"],"synonyms":[{"name":"AO2","type":"exact"},{"name":"AOII","type":"exact"},{"name":"De 50A Chapelle dysplasia","type":"related"},{"name":"De la Chapelle dysplasia","type":"related"},{"name":"atelosteogenesis II","type":"related"},{"name":"atelosteogenesis type 2","type":"exact"},{"name":"atelosteogenesis type II","type":"exact"},{"name":"atelosteogenesis, type 2","type":"related"},{"name":"atelosteogenesis, type II","type":"related"},{"name":"neonatal osseous dysplasia 1","type":"related"},{"name":"neonatal osseous dysplasia type 1","type":"exact"}],"termid":"MONDO:0009727","terms_by_termid":{"MONDO:0009727":null},"xrefs":{"Monarch":{"xref_id":"0009727"}}}


id: PBO:0045600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 11 (pseudogene)","termid":"PBO:0045600"}


id: PBO:0055537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2973","termid":"PBO:0055537"}


id: GO:0003086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensinogen metabolites in the kidney modulate the force with which blood passes through the renal circulatory system. The process begins when renin cleaves angiotensinogen.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by renin-angiotensin","termid":"GO:0003081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by local renal renin-angiotensin","termid":"GO:0003086"}


id: MONDO:1011863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute necrotising encephalopathy of Leigh, non-human animal","secondary_identifiers":["OMIA:001097"],"termid":"MONDO:1011863","xrefs":{"Monarch":{"xref_id":"1011863"}}}


id: PBO:0075391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp4 transcription factor","termid":"PBO:0075391"}


id: PBO:0090214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,6-galactosyltransferase Gmh4","termid":"PBO:0090214"}


id: GO:0071690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the myosin-based thick filaments of myofibrils in cardiac muscle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle myosin thick filament assembly","termid":"GO:0071688"},{"relation_name":"part_of","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"cardiac muscle myosin thick filament assembly","termid":"GO:0071690"}


id: PBO:0043475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 11","termid":"PBO:0043475"}


id: PBO:0064157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IIA","termid":"PBO:0064157"}


id: FYPO:0004608
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the spindle pole body is abnormal during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology during meiotic cell cycle","termid":"FYPO:0006406"},{"relation_name":"output_of","term_name":"abnormal prospore-specific spindle pole body remodeling","termid":"FYPO:0003561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000631"],"is_obsolete":false,"name":"abnormal spindle pole body morphology during meiosis II","synonyms":[{"name":"abnormal SPB morphology during meiosis II","type":"exact"},{"name":"abnormal spindle pole body morphology during second meiotic nuclear division","type":"exact"},{"name":"abnormal spindle pole body structure during meiosis II","type":"narrow"}],"termid":"FYPO:0004608"}


id: PBO:0058338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4712","termid":"PBO:0058338"}


id: GO:0033841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [1-beta-D-fructofuranosyl-(2->1)-]m+1 alpha-D-glucopyranoside + [1-beta-D-fructofuranosyl-(2->1)-]n+1 alpha-D-glucopyranoside = [1-beta-D-fructofuranosyl-(2->1)-]m alpha-D-glucopyranoside + [1-beta-D-fructofuranosyl-(2->1)-]n+1 beta-D-fructofuranosyl-(2->6)-alpha-D-glucopyranoside (m > 0; n >= 0).","definition_xrefs":["EC:2.4.1.243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"6G-fructosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.243-RXN"],"synonyms":[{"name":"1F-oligo[beta-D-fructofuranosyl-(2->1)-]sucrose 6G-beta-D-fructotransferase activity","type":"related"},{"name":"6G-FFT","type":"related"},{"name":"6G-FT","type":"related"},{"name":"6G-fructotransferase activity","type":"related"},{"name":"fructan:fructan 6G-fructosyltransferase activity","type":"related"}],"termid":"GO:0033841"}


id: PBO:0034083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-conduit_for","termid":"PBO:0034083"}


id: MONDO:0002049
data:
  {"annotated_genes":["SJAG_04003","SJAG_04509","SJAG_04621","SJAG_01784","SJAG_02951","SJAG_03703","SJAG_02744","SJAG_02509","SJAG_01732","SJAG_02431","SJAG_03818","SJAG_01852","SJAG_04387"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86155,86156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015912"},{"annotations":[86435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800047"},{"annotations":[86753,86754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030827"},{"annotations":[85703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014757"},{"annotations":[84954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014078"},{"annotations":[86987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010743"},{"annotations":[86948,86949,86950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958333"},{"annotations":[86104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012775"},{"annotations":[86883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","definition":"A laboratory test result indicating that there is an abnormally small number of platelets in the circulating blood.","definition_xrefs":["NCIT:C3408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood platelet disease","termid":"MONDO:0002245"}],"gene_count":13,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_01784":null,"SJAG_01852":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02744":null,"SJAG_02951":null,"SJAG_03703":null,"SJAG_03818":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04509":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:683583694","MEDGEN:52737","SCTID:302215000","UMLS:C0040034","DOID:1588","ICD9:287.5","MESH:D013921"],"synonyms":[{"name":"platelet count decreased","type":"exact"},{"name":"thrombocytopenic disorder","type":"exact"}],"termid":"MONDO:0002049","terms_by_termid":{"MONDO:0010121":null,"MONDO:0010743":null,"MONDO:0012775":null,"MONDO:0014078":null,"MONDO:0014757":null,"MONDO:0015912":null,"MONDO:0030827":null,"MONDO:0800047":null,"MONDO:0958333":null},"xrefs":{"Monarch":{"xref_id":"0002049"}}}


id: MONDO:0033367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 58","secondary_identifiers":["MEDGEN:1646861","UMLS:C4693367","OMIM:617830","DOID:0080285","GARD:16259"],"synonyms":[{"name":"DEE58","type":"exact"},{"name":"EIEE58","type":"exact"},{"name":"developmental and epileptic encephalopathy 58","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 58","type":"exact"},{"name":"infantile epileptic encephalopathy 58","type":"exact"}],"termid":"MONDO:0033367","xrefs":{"Monarch":{"xref_id":"0033367"}}}


id: FYECO:0000245
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which phosphate was added to the medium or assay buffer in excess.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ phosphate","termid":"FYECO:0000245"}


id: GO:0019463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glycine into other compounds, including creatine.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glycine catabolic process to creatine (obsolete GO:0019463)","synonyms":[{"name":"glycine breakdown to creatine","type":"exact"},{"name":"glycine degradation to creatine","type":"exact"}],"termid":"GO:0019463"}


id: PBO:0053258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand of ATE1","termid":"PBO:0053258"}


id: PBO:0054799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2212","termid":"PBO:0054799"}


id: PBO:0002542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim13 (predicted)","termid":"PBO:0002542"}


id: MONDO:0009644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency","termid":"MONDO:0020480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency type B","secondary_identifiers":["Orphanet:308393","MESH:C565373","GARD:17387","PMID:10053004","DOID:0111163","OMIM:252160","UMLS:C1854989","MEDGEN:340760"],"synonyms":[{"name":"MOCOD type B","type":"exact"},{"name":"MOCODB","type":"exact"},{"name":"combined deficiency of sulfite oxidase, xanthine dehydrogenase and aldehyde oxidase type B","type":"exact"},{"name":"molybdenum cofactor deficiency B","type":"exact"},{"name":"molybdenum cofactor deficiency complementation group B","type":"exact"},{"name":"molybdenum cofactor deficiency type B","type":"related"},{"name":"molybdenum cofactor deficiency, complementation group B","type":"related"},{"name":"molybdenum cofactor deficiency, complementation group type B","type":"exact"},{"name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency type B","type":"exact"}],"termid":"MONDO:0009644","xrefs":{"Monarch":{"xref_id":"0009644"}}}


id: PBO:0056608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic enzyme 1","termid":"PBO:0056608"}


id: MONDO:0019522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recessive dystrophic epidermolysis bullosa (RDEB)-generalized other, also known as RDEB non-Hallopeau-Siemens type, is a subtype of DEB characterized by generalized cutaneous and mucosal blistering that is not associated with severe deformities.","definition_xrefs":["Orphanet:89842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"recessive dystrophic epidermolysis bullosa-generalized other","secondary_identifiers":["MEDGEN:1392226","UMLS:C4511044","GARD:12794"],"synonyms":[{"name":"RDEB generalisata mitis","type":"exact"},{"name":"RDEB, generalised intermediate","type":"exact"},{"name":"RDEB, generalized intermediate","type":"exact"},{"name":"RDEB, non-Hallopeau-Siemens type","type":"exact"},{"name":"RDEB-O","type":"exact"},{"name":"RDEB-generalized other","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa generalisata mitis","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa, generalised other","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa, generalized other","type":"exact"},{"name":"generalised mitis RDEB","type":"exact"},{"name":"generalized mitis RDEB","type":"exact"},{"name":"recessive dystrophic epidermolysis bullosa, generalised intermediate","type":"related"},{"name":"recessive dystrophic epidermolysis bullosa, generalized intermediate","type":"related"},{"name":"recessive dystrophic epidermolysis bullosa, non-Hallopeau-Siemens type","type":"exact"}],"termid":"MONDO:0019522","xrefs":{"Monarch":{"xref_id":"0019522"}}}


id: PBO:0056894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIDEAS antisense RNA 1","termid":"PBO:0056894"}


id: PBO:0043241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 1","termid":"PBO:0043241"}


id: PBO:0002369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sec20 (predicted)","termid":"PBO:0002369"}


id: MONDO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peripheral nerve lesion that involves the common fibular nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lesion of sciatic nerve","termid":"MONDO:0001543"},{"relation_name":"is_a","term_name":"mononeuritis of lower limb","termid":"MONDO:0004797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"common peroneal nerve lesion","secondary_identifiers":["SCTID:399107008","MEDGEN:543054","UMLS:C0270909","ICD9:355.3","DOID:12527"],"synonyms":[{"name":"common fibular nerve peripheral nerve lesion","type":"exact"},{"name":"peripheral nerve lesion of common fibular nerve","type":"exact"}],"termid":"MONDO:0001542","xrefs":{"Monarch":{"xref_id":"0001542"}}}


id: FYPO:0000952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuoles present in increased numbers","termid":"FYPO:0002790"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"vacuoles present in increased numbers during vegetative growth","synonyms":[{"name":"additional vacuoles present during vegetative growth","type":"exact"},{"name":"extra vacuoles during vegetative growth","type":"exact"},{"name":"vacuoles present in greater numbers during vegetative growth","type":"exact"},{"name":"vacuoles present in increased numbers during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000952"}


id: PBO:0028402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_respiratory_electron_transport","termid":"PBO:0028402"}


id: PBO:0043741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2","termid":"PBO:0043741"}


id: PBO:0113421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAPII degradation factor; forms a complex with Rad26p in chromatin, enables ubiquitination and proteolysis of RNAPII present in an elongation complex; interacts with general transcription factor TFIIH; mutant is deficient in Zip1p loading onto chromosomes during meiosis; null mutant is prone to self-diploidization; null mutation can be functionally complemented by human UBAP2 and UBAP2","termid":"PBO:0113421"}


id: PBO:0054781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2194","termid":"PBO:0054781"}


id: PBO:0069998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1293, pseudogene","termid":"PBO:0069998"}


id: PBO:0091040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, human GPANK1 ortholog","termid":"PBO:0091040"}


id: PBO:0086590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; exhibits homology to C-terminal end of Bul1p; expressed as a readthrough product of BSC5, the readthrough locus being termed BUL3; the BUL3 readthrough product is involved in ubiquitin-mediated sorting of plasma membrane proteins and interacts with WW domains of Rsp5p in vitro, but in a functionally different way than the non-readthrough form","termid":"PBO:0086590"}


id: SO:1000048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal translocation with two breaks; two chromosome segments have simply been exchanged.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_translocation","termid":"SO:1000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reciprocal_chromosomal_translocation","synonyms":[{"name":"reciprocal chromosomal translocation","type":"exact"}],"termid":"SO:1000048"}


id: PBO:0062764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily R member 1","termid":"PBO:0062764"}


id: MONDO:0011485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive congenital ichthyosis characterized by fine white or greyish-white scales, hyperkeratosis, moderate acanthosis, and moderate parakeratosis that has material basis in homozygous mutation in the CYP4F22 gene on chromosome 19p13.","definition_xrefs":["PMID:16436457","DOID:0060714","PMID:10712223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital ichthyosis","termid":"MONDO:0017265"},{"relation_name":"is_a","term_name":"lamellar ichthyosis","termid":"MONDO:0017778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis 5","secondary_identifiers":["UMLS:C1858133","OMIM:604777","MEDGEN:347628","MESH:C537265","GARD:9734"],"synonyms":[{"name":"ARCI5","type":"exact"},{"name":"LI3, formerly","type":"related"},{"name":"NNCI","type":"related"},{"name":"autosomal recessive congenital ichthyosis 5","type":"exact"},{"name":"autosomal recessive congenital ichthyosis type 5","type":"exact"},{"name":"autosomal recessive congenital nonlamellar and nonerythrodermic ichthyosis","type":"exact"},{"name":"ichthyosis congenita 3","type":"related"},{"name":"ichthyosis congenita III","type":"related"},{"name":"ichthyosis lamellar 3","type":"related"},{"name":"ichthyosis, NONLAMELLAR and NONERYTHRODERMIC, congenital, autosomal recessive","type":"related"},{"name":"ichthyosis, Nonlamellar and Nonerythrodermic, congenital, autosomal recessive","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive 5","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive type 5","type":"exact"},{"name":"ichthyosis, lamellar, 3","type":"related"},{"name":"ichthyosis, lamellar, 3, formerly","type":"related"},{"name":"lamellar ichthyosis, type 3","type":"related"},{"name":"type 3 lamellar ichthyosis","type":"related"}],"termid":"MONDO:0011485","xrefs":{"Monarch":{"xref_id":"0011485"}}}


id: GO:0097144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligomeric protein complex consisting of BAX, a member of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAX complex","termid":"GO:0097144"}


id: PBO:0071957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 7","termid":"PBO:0071957"}


id: GO:0033900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA precursor into two, leaving 5'-hydroxy and 3'-phosphate groups.","definition_xrefs":["EC:3.1.27.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"ribonuclease F activity","secondary_identifiers":["MetaCyc:3.1.27.7-RXN"],"synonyms":[{"name":"RNase F activity","type":"related"},{"name":"ribonuclease F (E. coli) activity","type":"related"}],"termid":"GO:0033900"}


id: GO:0045785
data:
  {"annotated_genes":["SJAG_00910","SJAG_04191","SJAG_01253","SJAG_03484","SJAG_03802","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108431,113874,115935,111168,108554,105699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell adhesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cell adhesion","termid":"GO:0007155"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00910":null,"SJAG_01253":null,"SJAG_02380":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell adhesion","type":"narrow"},{"name":"stimulation of cell adhesion","type":"narrow"},{"name":"up regulation of cell adhesion","type":"exact"},{"name":"up-regulation of cell adhesion","type":"exact"},{"name":"upregulation of cell adhesion","type":"exact"}],"termid":"GO:0045785","terms_by_termid":{"GO:1900735":null}}


id: GO:0006725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular aromatic compound metabolic process (obsolete GO:0006725)","termid":"GO:0006725"}


id: MONDO:0022676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cataract - glaucoma (obsolete MONDO:0022676)","termid":"MONDO:0022676","xrefs":{"Monarch":{"xref_id":"0022676"}}}


id: FYPO:0002543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues N-terminal to proline residues (i.e. in Thr-Pro sequences) occurs to a lower extent than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydroxyurea (obsolete FYPO:0002543)","synonyms":[{"name":"decreased protein threonine phosphorylation at TP site during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to HU","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"decreased protein threonine phosphorylation at threonine-proline site during cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein threonine phosphorylation at Thr-Pro site during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002543"}


id: MONDO:0017858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia characterized by a predominant immature erythroid population. There are two subtypes recognized: erythroleukemia and pure erythroid leukemia. (WHO, 2001)","definition_xrefs":["NCIT:C8923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"},{"relation_name":"is_a","term_name":"erythroid neoplasm","termid":"MONDO:0020703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute erythroid leukemia","secondary_identifiers":["ICD9:205.80","NANDO:2200010","DOID:0080780","ICD9:207.00","ICDO:9840/3","icd11.foundation:538743484","SCTID:93451002","MEDGEN:7316","Orphanet:318","UMLS:C0023440","MESH:D004915","EFO:0000218","GARD:9620","icd11.foundation:631263622"],"synonyms":[{"name":"AEL","type":"exact"},{"name":"AML M6","type":"exact"},{"name":"AML-M6","type":"related"},{"name":"Di Guglielmo syndrome","type":"related"},{"name":"Di Guglielmo's syndrome","type":"related"},{"name":"Erythroleukemia","type":"related"},{"name":"FAB M6","type":"exact"},{"name":"M6 acute myeloid leukaemia","type":"exact"},{"name":"M6 acute myeloid leukemia","type":"exact"},{"name":"acute erythroblastic leukaemia","type":"exact"},{"name":"acute erythroblastic leukemia","type":"exact"},{"name":"acute erythroid leukemia","type":"exact"},{"name":"acute erythroleukemia","type":"related"},{"name":"acute erythroleukemia M6a subtype","type":"related"},{"name":"acute erythroleukemia M6b subtype","type":"related"},{"name":"acute myeloid leukaemia FAB-M6","type":"related"},{"name":"acute myeloid leukaemia M6","type":"exact"},{"name":"acute myeloid leukemia FAB-M6","type":"related"},{"name":"acute myeloid leukemia M6","type":"exact"},{"name":"erythroblastic leukaemia","type":"exact"},{"name":"erythroblastic leukemia","type":"exact"},{"name":"leukemia, erythroid, malignant","type":"exact"}],"termid":"MONDO:0017858","xrefs":{"Monarch":{"xref_id":"0017858"}}}


id: MOD:00346
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-phenylalanine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-phenylalanine.","definition_xrefs":["PubMed:12696888","PubMed:3936839","RESID:AA0341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(S-L-cysteinyl)-D-phenylalanine","synonyms":[{"name":"(2S)-2-amino-2-[(2R)-2-amino-2-carboxyethyl]sulfanyl-3-phenylpropanoic acid","type":"exact"},{"name":"(2S,5R)-2,5-diamino-3-thia-2-phenylmethylhexanedioic acid","type":"exact"},{"name":"2-(L-cystein-S-yl)-D-phenylalanine","type":"exact"},{"name":"CROSSLNK 2-cysteinyl-D-phenylalanine (Cys-Phe)","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-D-phenylalanine","type":"exact"}],"termid":"MOD:00346"}


id: PBO:0051889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITFG2 antisense RNA 1","termid":"PBO:0051889"}


id: PBO:0005545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1 subunit Tco89","termid":"PBO:0005545"}


id: PBO:0060024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 12","termid":"PBO:0060024"}


id: MONDO:0021517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the trachea.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"trachea neoplasm","termid":"MONDO:0021210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of trachea","secondary_identifiers":["icd11.foundation:1396826912","MEDGEN:56326","UMLS:C0153953","ICD10CM:D14.2","ICD9:212.2","NCIT:C3602","SCTID:92446002"],"synonyms":[{"name":"benign neoplasm of the trachea","type":"exact"},{"name":"benign trachea neoplasm","type":"exact"},{"name":"benign trachea tumor","type":"exact"},{"name":"benign trachea tumour","type":"exact"},{"name":"benign tracheal neoplasm","type":"exact"},{"name":"benign tracheal tumor","type":"exact"},{"name":"benign tracheal tumour","type":"exact"},{"name":"benign tumor of the trachea","type":"exact"},{"name":"benign tumor of trachea","type":"exact"},{"name":"benign tumour of the trachea","type":"exact"},{"name":"benign tumour of trachea","type":"exact"},{"name":"trachea benign neoplasm","type":"exact"}],"termid":"MONDO:0021517","xrefs":{"Monarch":{"xref_id":"0021517"}}}


id: PBO:0028627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology_during_mitotic_interphase","termid":"PBO:0028627"}


id: MONDO:1010016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mitral valve stenosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitral valve stenosis, non-human animal","secondary_identifiers":["OMIA:000655"],"termid":"MONDO:1010016","xrefs":{"Monarch":{"xref_id":"1010016"}}}


id: GO:1903727
data:
  {"annotated_genes":["SJAG_02613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid metabolic process.","definition_xrefs":["PMID:10657240","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"positively_regulates","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of phospholipid metabolic process","type":"narrow"},{"name":"activation of phospholipid metabolism","type":"narrow"},{"name":"positive regulation of phospholipid metabolism","type":"exact"},{"name":"up regulation of phospholipid metabolic process","type":"exact"},{"name":"up regulation of phospholipid metabolism","type":"exact"},{"name":"up-regulation of phospholipid metabolic process","type":"exact"},{"name":"up-regulation of phospholipid metabolism","type":"exact"},{"name":"upregulation of phospholipid metabolic process","type":"exact"},{"name":"upregulation of phospholipid metabolism","type":"exact"}],"termid":"GO:1903727","terms_by_termid":{"GO:1902648":null}}


id: PBO:0063189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 1","termid":"PBO:0063189"}


id: MONDO:1011787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myopathy of deep pectoral muscle, non-human animal","secondary_identifiers":["OMIA:000264"],"termid":"MONDO:1011787","xrefs":{"Monarch":{"xref_id":"1011787"}}}


id: GO:0042973
data:
  {"annotated_genes":["SJAG_02192","SJAG_01017","SJAG_00667"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73987,77638,79915],"is_not":false,"summary":null,"term":"GO:0042973"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.","definition_xrefs":["EC:3.2.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_02192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"glucan endo-1,3-beta-D-glucosidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3.2.1.39-RXN"],"synonyms":[{"name":"(1->3)-beta-glucan 3-glucanohydrolase activity","type":"related"},{"name":"(1->3)-beta-glucan endohydrolase activity","type":"related"},{"name":"1,3-beta-D-glucan 3-glucanohydrolase activity","type":"related"},{"name":"1,3-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"beta-1,3-glucanase","type":"broad"},{"name":"callase activity","type":"related"},{"name":"endo-(1,3)-beta-D-glucanase activity","type":"broad"},{"name":"endo-(1->3)-beta-D-glucanase activity","type":"broad"},{"name":"endo-1,3-beta-D-glucanase","type":"broad"},{"name":"endo-1,3-beta-glucanase activity","type":"broad"},{"name":"endo-1,3-beta-glucosidase activity","type":"broad"},{"name":"kitalase activity","type":"related"},{"name":"laminaranase activity","type":"broad"},{"name":"laminarinase activity","type":"broad"},{"name":"oligo-1,3-glucosidase activity","type":"related"}],"termid":"GO:0042973","terms_by_termid":{"GO:0042973":null}}


id: MONDO:0016188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of myofibrillar proteins","termid":"MONDO:0016186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of alphaB-cristallin","secondary_identifiers":["MEDGEN:1843314","Orphanet:209044","UMLS:C5680838","GARD:20427"],"termid":"MONDO:0016188","xrefs":{"Monarch":{"xref_id":"0016188"}}}


id: GO:0005456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a CMP-N-acetylneuraminate from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5651942","Reactome:R-HSA-727807"],"synonyms":[{"name":"CMP-sialic acid transmembrane transporter activity","type":"broad"}],"termid":"GO:0005456"}


id: GO:0047742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chenodeoxycholoyltaurine + H2O = chenodeoxycholate + taurine.","definition_xrefs":["MetaCyc:CHENODEOXYCHOLOYLTAURINE-HYDROLASE-RXN","EC:3.5.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"chenodeoxycholoyltaurine hydrolase activity","secondary_identifiers":["RHEA:16309"],"synonyms":[{"name":"chenodeoxycholoyltaurine amidohydrolase activity","type":"related"}],"termid":"GO:0047742"}


id: MONDO:0003390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon, usually aggressive adenocarcinoma of the breast characterized by the presence of clear cells that contain glycogen.","definition_xrefs":["NCIT:C40368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive ductal breast carcinoma","termid":"MONDO:0004953"},{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"glycogen-rich carcinoma","termid":"MONDO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"glycogen-rich clear cell breast carcinoma","secondary_identifiers":["MEDGEN:1785052","UMLS:C2012261","ICDO:8315/3","DOID:5310"],"synonyms":[{"name":"glycogen-rich carcinoma","type":"broad"},{"name":"glycogen-rich carcinoma (morphologic abnormality)","type":"broad"},{"name":"glycogen-rich, clear cell breast carcinoma","type":"exact"}],"termid":"MONDO:0003390","xrefs":{"Monarch":{"xref_id":"0003390"}}}


