# terms

id: PBO:0028938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_cell_growth_during_recovery_from_nitrogen_starvation","termid":"PBO:0028938"}


id: MONDO:0001738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete osteopetrosis (obsolete MONDO:0001738)","termid":"MONDO:0001738","xrefs":{"Monarch":{"xref_id":"0001738"}}}


id: GO:0043317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cytotoxic T cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated cytotoxicity","termid":"GO:0001914"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"regulates","term_name":"cytotoxic T cell degranulation","termid":"GO:0043316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of cytotoxic T cell degranulation","synonyms":[{"name":"regulation of cytotoxic T cell granule exocytosis","type":"exact"},{"name":"regulation of cytotoxic T lymphocyte degranulation","type":"exact"},{"name":"regulation of cytotoxic T lymphocyte granule exocytosis","type":"exact"},{"name":"regulation of cytotoxic T-cell degranulation","type":"exact"},{"name":"regulation of cytotoxic T-cell granule exocytosis","type":"exact"},{"name":"regulation of cytotoxic T-lymphocyte degranulation","type":"exact"},{"name":"regulation of cytotoxic T-lymphocyte granule exocytosis","type":"exact"}],"termid":"GO:0043317"}


id: GO:0045857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heritable epigenetic process that stops, prevents, or reduces the frequency, rate or extent of protein function by self-perpetuating conformational conversions of normal proteins in healthy cells. This is distinct from, though mechanistically analogous to, disease states associated with prion propagation and amyloidogenesis. A single protein, if it carries a glutamine/asparagine-rich ('prion') domain, can sometimes stably exist in at least two distinct physical states, each associated with a different phenotype; propagation of one of these traits is achieved by a self-perpetuating change in the protein from one form to the other, mediated by conformational changes in the glutamine/asparagine-rich domain. Prion domains are both modular and transferable to other proteins, on which they can confer a heritable epigenetic alteration of function; existing bioinformatics data indicate that they are rare in non-eukarya, but common in eukarya.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of molecular function, epigenetic (obsolete GO:0045857)","synonyms":[{"name":"down regulation of protein activity, epigenetic","type":"exact"},{"name":"down-regulation of protein activity, epigenetic","type":"exact"},{"name":"downregulation of protein activity, epigenetic","type":"exact"},{"name":"inhibition of protein activity, epigenetic","type":"narrow"},{"name":"negative regulation of protein activity, epigenetic","type":"exact"}],"termid":"GO:0045857"}


id: PBO:0001913
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe iNhibitor of Growth","termid":"PBO:0001913"}


id: PBO:0048375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor 1A","termid":"PBO:0048375"}


id: GO:0030146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of renal water excretion.","definition_xrefs":["GOC:mah","ISBN:0198506732","GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete diuresis (obsolete GO:0030146)","secondary_identifiers":["Wikipedia:Diuresis"],"synonyms":[{"name":"diuresis","type":"exact"},{"name":"positive regulation of renal water excretion","type":"exact"},{"name":"renal water excretion","type":"broad"}],"termid":"GO:0030146"}


id: PBO:0069820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1106, pseudogene","termid":"PBO:0069820"}


id: MONDO:0018457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic bone development disorder (obsolete MONDO:0018457)","secondary_identifiers":["Orphanet:404584"],"synonyms":[{"name":"rare genetic skeletal development disorder","type":"exact"}],"termid":"MONDO:0018457","xrefs":{"Monarch":{"xref_id":"0018457"}}}


id: MONDO:0014478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial congenital mirror movements in which the cause of the disease is a mutation in the DNAL4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial congenital mirror movements","termid":"MONDO:0016558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"mirror movements 3","secondary_identifiers":["GARD:16055","MEDGEN:863561","UMLS:C4015124","OMIM:616059"],"synonyms":[{"name":"DNAL4 familial congenital mirror movements","type":"exact"},{"name":"MRMV3","type":"related"},{"name":"familial congenital mirror movements caused by mutation in DNAL4","type":"exact"},{"name":"mirror movements 3","type":"exact"},{"name":"mirror movements type 3","type":"exact"}],"termid":"MONDO:0014478","xrefs":{"Monarch":{"xref_id":"0014478"}}}


id: MONDO:0021237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the adrenal medulla.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland neoplasm","termid":"MONDO:0021227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal medulla neoplasm","secondary_identifiers":["MEDGEN:108572","NCIT:C4856","UMLS:C0596046"],"synonyms":[{"name":"adrenal medulla neoplasm (disease)","type":"exact"},{"name":"adrenal medulla tumor","type":"exact"},{"name":"adrenal medulla tumour","type":"exact"},{"name":"neoplasm of adrenal medulla","type":"exact"},{"name":"tumor of adrenal medulla","type":"exact"},{"name":"tumour of adrenal medulla","type":"exact"}],"termid":"MONDO:0021237","xrefs":{"Monarch":{"xref_id":"0021237"}}}


id: FYPO:0002942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid, and has a larger volume than normal, when the cell is in G0 phase. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spheroid cell","termid":"FYPO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"swollen spheroid cell during G0","synonyms":[{"name":"enlarged spheroid cell during G0","type":"related"},{"name":"enlarged volume spheroid cell during G0","type":"exact"},{"name":"large spheroid cell during G0","type":"related"},{"name":"spheroid cell with increased cell size during G0","type":"related"},{"name":"spheroid cell with increased cell volume during G0","type":"exact"},{"name":"swollen rounded cell during G0","type":"exact"},{"name":"swollen spheroid cell during cell quiescence","type":"exact"},{"name":"swollen spheroid cell during quiescence","type":"exact"}],"termid":"FYPO:0002942"}


id: GO:0021996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anterior-most portion of the neural axis is formed by closure of the anterior neuropore.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"anterior neuropore closure","termid":"GO:0021506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lamina terminalis formation","termid":"GO:0021996"}


id: PBO:0030388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cortex_morphology","termid":"PBO:0030388"}


id: MONDO:0014976
data:
  {"annotated_genes":["SJAG_01004"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86786],"is_not":false,"summary":null,"term":"MONDO:0014976"}]},"cv_name":"mondo","definition":"Lethal left ventricular non-compaction-seizures-hypotonia-cataract-developmental delay syndrome is rare, genetic, neurometabolic disease characterized by global developmental delay, severe hypotonia, seizures, cataracts, cardiomyopathy (including left or bi-ventricular hypertrophy, dilated cardiomyopathy) and left ventricular non-compaction, typically resulting in infantile or early-childhood death. Patients usually present metabolic lactic acidosis, failure to thrive, head lag, respiratory problems and decrease in respiratory chain complex activity. Highly variable cerebral abnormalities have been reported and include microcephaly, prominent extra-axial cerebrospinal fluid spaces, diffuse neuronal loss and cortical/white matter gliosis.","definition_xrefs":["Orphanet:478049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01004":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"lethal left ventricular non-compaction-seizures-hypotonia-cataract-developmental delay syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934628","DOID:0111488","GARD:17865","OMIM:617228","UMLS:C4310661"],"synonyms":[{"name":"COXPD31","type":"exact"},{"name":"MIPEP combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 31","type":"exact"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MIPEP","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 31","type":"exact"}],"termid":"MONDO:0014976","terms_by_termid":{"MONDO:0014976":null},"xrefs":{"Monarch":{"xref_id":"0014976"}}}


id: PBO:0111064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome complex disassembly protein Ntr2, human GCFC2 ortholog","termid":"PBO:0111064"}


id: PBO:0044960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 4 like 2","termid":"PBO:0044960"}


id: PR:P34069
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-factor precursor mfm2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:MSY","UniProtKB:P34069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-factor precursor mfm2","termid":"PR:000025004"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.03","synonyms":[{"name":"Spom972h-mfm2","type":"exact"}],"termid":"PR:P34069"}


id: MONDO:0011114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Brooke-Spiegler syndrome","termid":"MONDO:0011512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"familial multiple trichoepithelioma","secondary_identifiers":["MEDGEN:220890","SCTID:403825008","GARD:10867","Orphanet:867","UMLS:C1275122","NCIT:C205364"],"synonyms":[{"name":"Brooke-Fordyce Trichoepitheliomas","type":"related"},{"name":"epithelioma Adenoides Cysticum of Brooke","type":"related"},{"name":"epithelioma adenoides cysticum","type":"related"},{"name":"epithelioma, hereditary multiple benign cystic","type":"related"},{"name":"hereditary multiple benign cystic epithelioma","type":"related"},{"name":"multiple familial trichoepithelioma","type":"related"},{"name":"trichoepithelioma multiple familial","type":"related"}],"termid":"MONDO:0011114","xrefs":{"Monarch":{"xref_id":"0011114"}}}


id: PBO:0091856
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the Scp1 C-terminal domain forms a dimer of dimers","termid":"PBO:0091856"}


id: FYPO:0007348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 36 of histone H3 is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K36 methylation during vegetative growth","termid":"FYPO:0002918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K36 trimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K36 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K36 trimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K36me3 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K36 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K36 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007348"}


id: PBO:0087536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein N-terminal acetyltransferase NatA; NatA comprised of Nat1p, Ard1p, and Nat5p; N-terminally acetylates many proteins to influence multiple processes such as cell cycle progression, heat-shock resistance, mating, sporulation, telomeric silencing and early stages of mitophagy; orthologous to human NAA15; expression of both human NAA10 and NAA15 functionally complements ard1 nat1 double mutant although single mutations are not complemented by their orthologs","termid":"PBO:0087536"}


id: GO:0097560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left caudal basal body, extending cytoplasmically and exiting at the posterior end of the cell body.","definition_xrefs":["GOC:giardia","ISBN:9780124260207","PMID:16607022","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left caudal flagellum","synonyms":[{"name":"left caudal cilium","type":"exact"}],"termid":"GO:0097560"}


id: GO:0031216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of pullulan to panose (6-alpha-D-glucosylmaltose).","definition_xrefs":["EC:3.2.1.135","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"neopullulanase activity","secondary_identifiers":["MetaCyc:3.2.1.135-RXN"],"synonyms":[{"name":"pullulan 4-D-glucanohydrolase (panose-forming)","type":"related"},{"name":"pullulanase II activity","type":"exact"}],"termid":"GO:0031216"}


id: GO:0052057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type III secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by type III secretion system (obsolete GO:0052057)","termid":"GO:0052057"}


id: PBO:0044747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 25","termid":"PBO:0044747"}


id: PR:Q1MTQ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosome subunit biogenesis protein NIP7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23415:SF4","OMA:SCHPO04205","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosome subunit biogenesis protein nip7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.11c","secondary_identifiers":["UniProtKB:Q1MTQ9"],"synonyms":[{"name":"Spom972h-NIP7","type":"exact"}],"termid":"PR:Q1MTQ9"}


id: PBO:0041103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSG antisense RNA 1","termid":"PBO:0041103"}


id: MONDO:0019367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Regional odontodysplasia (ROD) is a localized developmental anomaly of the dental tissues.","definition_xrefs":["Orphanet:83450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodontal disorder","termid":"MONDO:0002635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional odontodysplasia","secondary_identifiers":["MEDGEN:104891","MESH:D018126","SCTID:66063001","GARD:19036","icd11.foundation:1516505714","UMLS:C0206554"],"synonyms":[{"name":"ghost teeth","type":"exact"}],"termid":"MONDO:0019367","xrefs":{"Monarch":{"xref_id":"0019367"}}}


id: GO:0016756
data:
  {"annotated_genes":["SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70626],"is_not":false,"summary":null,"term":"GO:0016756"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathione + Glu(-Cys)(n)-Gly = Gly + Glu(-Cys)(n+1)-Gly.","definition_xrefs":["EC:2.3.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"glutathione gamma-glutamylcysteinyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:17917","MetaCyc:2.3.2.15-RXN","GO:0042143"],"synonyms":[{"name":"phytochelatin synthase activity","type":"narrow"}],"termid":"GO:0016756","terms_by_termid":{"GO:0016756":null}}


id: PBO:0067045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 65, pseudogene","termid":"PBO:0067045"}


id: PBO:0050845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"islet cell autoantigen 1","termid":"PBO:0050845"}


id: MONDO:0015585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptogenic late-onset epileptic spasms is a rare epilepsy syndrome characterized by late-onset (after 1 year old) epileptic spasms that occur in clusters, associated with tonic seizures, atypical absences and cognitive deterioration. Language difficulties and behavior problems are frequently present. EEG is characterized by a temporal, or temporofrontal, slow wave or spike focus combined with synchronous spike-waves and no hypsarrhythmia or background activity.","definition_xrefs":["Orphanet:163708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"cryptogenic late-onset epileptic spasms","secondary_identifiers":["MEDGEN:1666207","UMLS:C4755310","GARD:20050","icd11.foundation:457378168"],"synonyms":[{"name":"late-onset infantile spasms","type":"exact"}],"termid":"MONDO:0015585","xrefs":{"Monarch":{"xref_id":"0015585"}}}


id: MONDO:0003093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma of the esophagus which contains squamous cells, mucus secreting cells, and cells of an intermediate type. (WHO)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"},{"relation_name":"is_a","term_name":"esophageal adenocarcinoma","termid":"MONDO:0005028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"mucoepidermoid esophageal carcinoma","secondary_identifiers":["NCIT:C5343","DOID:4686","UMLS:C1333461","MEDGEN:234232"],"synonyms":[{"name":"esophagus mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of the esophagus","type":"exact"},{"name":"mucoepidermoid carcinoma of the oesophagus","type":"exact"},{"name":"oesophagus mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0003093","xrefs":{"Monarch":{"xref_id":"0003093"}}}


id: FYPO:0002624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that fewer dots are observed than in normal (wild type) cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased punctate nuclear protein localization","synonyms":[{"name":"decreased punctate nuclear protein localisation","type":"exact"},{"name":"decreased punctate nuclear protein localization during mitotic cell cycle","type":"related"},{"name":"decreased punctate nuclear protein localization during vegetative growth","type":"exact"},{"name":"reduced punctate nuclear protein localization","type":"exact"}],"termid":"FYPO:0002624"}


id: FYPO:0005550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hydroxyurea is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein level during cellular response to hydroxyurea","synonyms":[{"name":"normal protein accumulation during cellular response to hydroxyurea","type":"related"},{"name":"normal protein level during cellular response to HU","type":"exact"},{"name":"normal protein level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0005550"}


id: MONDO:0018148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vasoproliferative tumor of the retina is a rare, benign, retinal vascular disease characterized by solitary or multiple, unilateral or bilateral, intra-retinal tumor(s), usually located in the peripheral infero-temporal quadrant, and often associated with sub- and intraretinal exudates, epiretinal membranes, exudative retinal detachment and cystoid macular edema, as well as, occasionally, retinal and vitreous hemorrhage. Patients may present with visual loss, floaters, and/or photopsia. Association with various conditions, such as retinitis pigmentosa, congenital retinal toxoplasmosis, retinopathy of prematurity, or coloboma, has been reported.","definition_xrefs":["Orphanet:353356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vasoproliferative tumor of retina","secondary_identifiers":["MEDGEN:1652844","GARD:21533","UMLS:C4749792"],"synonyms":[{"name":"VPTR","type":"exact"},{"name":"retinal vasoproliferative tumor","type":"exact"},{"name":"retinal vasoproliferative tumour","type":"exact"},{"name":"vasoproliferative tumor of ocular fundus","type":"exact"},{"name":"vasoproliferative tumor of the ocular fundus","type":"exact"},{"name":"vasoproliferative tumor of the retina","type":"related"},{"name":"vasoproliferative tumour of ocular fundus","type":"exact"},{"name":"vasoproliferative tumour of the ocular fundus","type":"exact"},{"name":"vasoproliferative tumour of the retina","type":"related"}],"termid":"MONDO:0018148","xrefs":{"Monarch":{"xref_id":"0018148"}}}


id: PBO:0029859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_vegetative_cell_population_(obsolete_FYPO:0002378)","termid":"PBO:0029859"}


id: GO:0022017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of neuroblasts in the pallium. Neuroblasts are precursor cells that give rise to neurons.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuroblast division","termid":"GO:0021873"},{"relation_name":"part_of","term_name":"pallium cell proliferation in forebrain","termid":"GO:0022013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division in pallium","termid":"GO:0022017"}


id: PBO:0005797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk34","termid":"PBO:0005797"}


id: GO:2000069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of post-embryonic root development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of root development","termid":"GO:2000280"},{"relation_name":"regulates","term_name":"post-embryonic root development","termid":"GO:0048528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of post-embryonic root development","termid":"GO:2000069"}


id: GO:0042281
data:
  {"annotated_genes":["SJAG_03656"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76936],"is_not":false,"summary":null,"term":"GO:0042281"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of the first glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation; the transfer of glucose from dolichyl phosphate glucose (Dol-P-Glc) on to the lipid-linked oligosaccharide Man(9)GlcNAc(2)-PP-Dol.","definition_xrefs":["GOC:al","MetaCyc:RXN-5470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity","termid":"GO:0004583"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.4.1.267","RHEA:30635"],"synonyms":[{"name":"dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase activity","type":"exact"}],"termid":"GO:0042281","terms_by_termid":{"GO:0042281":null}}


id: SO:0000871
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that is polyadenylated.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"adjacent_to","term_name":"polyA_sequence","termid":"SO:0000610"},{"relation_name":"has_quality","term_name":"polyadenylated","termid":"SO:0000246"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylated_mRNA","synonyms":[{"name":"polyadenylated mRNA","type":"exact"}],"termid":"SO:0000871"}


id: GO:0043807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methyl-2-oxobutanoate + CoA + oxidized ferredoxin = S-(2-methylpropanoyl)-CoA + CO2 + reduced ferredoxin.","definition_xrefs":["EC:1.2.7.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity","secondary_identifiers":["RHEA:11712","MetaCyc:1.2.7.7-RXN"],"synonyms":[{"name":"2-ketoisovalerate ferredoxin reductase activity","type":"related"},{"name":"2-oxoisovalerate ferredoxin reductase activity","type":"related"},{"name":"3-methyl-2-oxobutanoate synthase (ferredoxin) activity","type":"related"},{"name":"3-methyl-2-oxobutanoate:ferredoxin oxidoreductase (decarboxylating; CoA-2-methylpropanoylating)","type":"exact"},{"name":"VOR","type":"related"},{"name":"branched-chain ketoacid ferredoxin reductase activity","type":"related"},{"name":"branched-chain oxo acid ferredoxin reductase activity","type":"related"},{"name":"keto-valine-ferredoxin oxidoreductase activity","type":"related"},{"name":"ketoisovalerate ferredoxin reductase activity","type":"related"},{"name":"ketoisovalerate oxidoreductase activity","type":"related"}],"termid":"GO:0043807"}


id: PBO:0067856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 158","termid":"PBO:0067856"}


id: PBO:0049178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GREB1 like retinoic acid receptor coactivator","termid":"PBO:0049178"}


id: PBO:0049638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 41","termid":"PBO:0049638"}


id: GO:0032555
data:
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id: PBO:0041806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 17, pseudogene","termid":"PBO:0041806"}


id: PBO:0050994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT122 pseudogene 1","termid":"PBO:0050994"}


id: PBO:0073294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 16","termid":"PBO:0073294"}


id: GO:2001000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"is_a","term_name":"regulation of hemicellulose catabolic process","termid":"GO:2000988"},{"relation_name":"regulates","term_name":"xylan catabolic process","termid":"GO:0045493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of xylan catabolic process","synonyms":[{"name":"regulation of xylan breakdown","type":"exact"},{"name":"regulation of xylan catabolism","type":"exact"},{"name":"regulation of xylan degradation","type":"exact"}],"termid":"GO:2001000"}


id: MONDO:0044745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic injuries to the brain, cranial nerves, spinal cord, autonomic nervous system, or neuromuscular system, including iatrogenic injuries induced by surgical procedures.","definition_xrefs":["MESH:D020196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nervous system injury","secondary_identifiers":["EFO:0009490","SCTID:128239009"],"synonyms":[{"name":"Injuries, craniocervical","type":"related"},{"name":"Injuries, nervous system","type":"related"},{"name":"craniocervical Injuries","type":"related"},{"name":"craniocervical injury","type":"related"},{"name":"injury of nervous system","type":"exact"},{"name":"injury, craniocervical","type":"related"},{"name":"injury, nervous system","type":"related"},{"name":"nervous system Injuries","type":"related"},{"name":"nervous system Traumas","type":"related"},{"name":"nervous system injury","type":"exact"},{"name":"nervous system trauma","type":"related"}],"termid":"MONDO:0044745","xrefs":{"Monarch":{"xref_id":"0044745"}}}


id: PBO:0041614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdk5 and Abl enzyme substrate 2","termid":"PBO:0041614"}


id: GO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resumption of the mitotic cell division cycle by cells that were in a quiescent or other non-dividing state.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"re-entry into mitotic cell cycle","termid":"GO:0000320"}


id: MONDO:0002821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland follicular carcinoma","termid":"MONDO:0005034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"trabecular follicular adenocarcinoma","secondary_identifiers":["MEDGEN:569646","UMLS:C0334327","DOID:3964"],"synonyms":[{"name":"follicular adenocarcinoma, trabecular","type":"exact"},{"name":"follicular adenocarcinoma, trabecular (morphologic abnormality)","type":"exact"},{"name":"trabecular follicular carcinoma","type":"exact"}],"termid":"MONDO:0002821","xrefs":{"Monarch":{"xref_id":"0002821"}}}


id: PBO:0034414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_process_that_acts_on_population_of","termid":"PBO:0034414"}


id: PBO:0036433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A nucleosome disassembly protein Ccp1","termid":"PBO:0036433"}


id: MONDO:1010604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypothyroidism that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, non-human animal","termid":"MONDO:1010057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism, horse","secondary_identifiers":["OMIA:000536-9796"],"termid":"MONDO:1010604","xrefs":{"Monarch":{"xref_id":"1010604"}}}


id: PR:O43028
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vac8 gene.","definition_xrefs":["UniProtKB:O43028","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.14c","synonyms":[{"name":"Spom972h-vac8","type":"exact"}],"termid":"PR:O43028"}


id: MONDO:0024332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic rhinitis caused by indoor allergens and lasting year round.","definition_xrefs":["NCIT:C92189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic rhinitis","termid":"MONDO:0011786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"perennial allergic rhinitis","secondary_identifiers":["SCTID:446096008","MEDGEN:19783","MESH:D012221","UMLS:C0035457","EFO:1001417","icd11.foundation:1273917262"],"synonyms":[{"name":"non-seasonal allergic rhinitis","type":"exact"},{"name":"nonseasonal allergic rhinitis","type":"exact"},{"name":"perennial allergic rhinitis","type":"exact"}],"termid":"MONDO:0024332","xrefs":{"Monarch":{"xref_id":"0024332"}}}


id: MONDO:0016981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"disorder of thiamine metabolism and transport","termid":"MONDO:0017578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"infantile spams-psychomotor retardation-progressive brain atrophy-basal ganglia disease syndrome","secondary_identifiers":["UMLS:C5190692","GARD:20899","MEDGEN:1675231","Orphanet:263410"],"synonyms":[{"name":"infantile spasms-psychomotor retardation-progressive brain atrophy-basal ganglia disease syndrome","type":"related"}],"termid":"MONDO:0016981","xrefs":{"Monarch":{"xref_id":"0016981"}}}


id: GO:1903612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium-dependent ATPase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:10861851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium-dependent ATPase activity","synonyms":[{"name":"activation of calcium-dependent ATPase activity","type":"narrow"},{"name":"up regulation of calcium-dependent ATPase activity","type":"exact"},{"name":"up-regulation of calcium-dependent ATPase activity","type":"exact"},{"name":"upregulation of calcium-dependent ATPase activity","type":"exact"}],"termid":"GO:1903612"}


id: GO:0055062
data:
  {"annotated_genes":["SJAG_03644","SJAG_04242","SJAG_01000","SJAG_00244","SJAG_03624","SJAG_00232","SJAG_03061","SJAG_01713","SJAG_05325","SJAG_03519","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114393,102392,88503,91931,108828,114840,96982,107491,102391,107373,102390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030643"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of phosphate ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_00244":null,"SJAG_01000":null,"SJAG_01713":null,"SJAG_03061":null,"SJAG_03519":null,"SJAG_03624":null,"SJAG_03644":null,"SJAG_04242":null,"SJAG_04870":null,"SJAG_05325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"phosphate ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Pi homeostasis","type":"exact"},{"name":"phosphate homeostasis","type":"broad"}],"termid":"GO:0055062","terms_by_termid":{"GO:0030643":null}}


id: GO:0009516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A colorless plastid involved in the synthesis of monoterpenes.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"leucoplast","secondary_identifiers":["Wikipedia:Leucoplast"],"termid":"GO:0009516"}


id: PBO:0083097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage-responsive protein; expression is increased in response to heat-shock stress or treatments that produce DNA lesions; contains multiple repeats of the amino acid sequence NNNDSYGS; protein abundance increases in response to DNA replication stress","termid":"PBO:0083097"}


id: PBO:0040593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BACH1 intronic transcript 3","termid":"PBO:0040593"}


id: GO:0002655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction to nonself antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"regulates","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction to nonself antigen","termid":"GO:0002655"}


id: MONDO:0012803
data:
  {"annotated_genes":["SJAG_04859"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85976],"is_not":false,"summary":null,"term":"MONDO:0012803"}]},"cv_name":"mondo","definition":"This syndrome is characterized by diarrhea and vomiting after ingestion of trehalose, a disaccharide found mainly in mushrooms.","definition_xrefs":["Orphanet:103909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"diarrhea-vomiting due to trehalase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10372","SCTID:84193000","UMLS:C0268187","OMIM:612119","icd11.foundation:2025219157","ICD9:271.8","MEDGEN:75660","MESH:C562603"],"synonyms":[{"name":"isolated trehalose intolerance","type":"exact"},{"name":"trehalase deficiency","type":"related"},{"name":"trehalose intolerance","type":"related"}],"termid":"MONDO:0012803","terms_by_termid":{"MONDO:0012803":null},"xrefs":{"Monarch":{"xref_id":"0012803"}}}


id: GO:0047354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-choline + sphingosine = CMP + H+ + sphingosyl-phosphocholine.","definition_xrefs":["EC:2.7.8.10","RHEA:21224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016780","GO:0003674"],"is_obsolete":false,"name":"sphingosine cholinephosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R01929","MetaCyc:2.7.8.10-RXN"],"synonyms":[{"name":"CDP-choline-sphingosine cholinephosphotransferase activity","type":"related"},{"name":"CDP-choline:sphingosine cholinephosphotransferase activity","type":"related"},{"name":"cytidine diphosphocholine-sphingosine cholinephosphotransferase activity","type":"related"},{"name":"phosphorylcholine-sphingosine transferase activity","type":"related"},{"name":"sphingosine choline phosphotransferase activity","type":"exact"}],"termid":"GO:0047354"}


id: PBO:0047996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member M, pseudogene","termid":"PBO:0047996"}


id: PBO:0038818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 21 pseudogene 1","termid":"PBO:0038818"}


id: PBO:0109283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRXN1 divergent transcript","termid":"PBO:0109283"}


id: PBO:0055441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2872","termid":"PBO:0055441"}


id: PBO:0066850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 150","termid":"PBO:0066850"}


id: PBO:0113509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C protein phosphatase (PP2C); dephosphorylates Hog1p, inactivating the osmosensing MAPK cascade; involved in Fus3p activation during pheromone response; deletion affects precursor tRNA splicing, mitochondrial inheritance, and sporulation; involved in myosin-V dependent inheritance of mitochondria, peroxisomes, vacuoles and secretory vesicles; localizes to the nucleus, cytoplasm and peroxisomes","termid":"PBO:0113509"}


id: PBO:0062081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 12 pseudogene","termid":"PBO:0062081"}


id: GO:2000467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycogen (starch) synthase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of glycogen (starch) synthase activity","termid":"GO:2000465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycogen (starch) synthase activity","synonyms":[{"name":"positive regulation of UDP-glucose-glycogen glucosyltransferase activity","type":"exact"},{"name":"positive regulation of UDP-glucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"positive regulation of UDP-glycogen synthase activity","type":"exact"},{"name":"positive regulation of UDPG-glycogen synthetase activity","type":"exact"},{"name":"positive regulation of UDPG-glycogen transglucosylase activity","type":"exact"},{"name":"positive regulation of UDPglucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"positive regulation of glycogen (starch) synthetase activity","type":"exact"},{"name":"positive regulation of uridine diphosphoglucose-glycogen glucosyltransferase activity","type":"exact"}],"termid":"GO:2000467"}


id: PBO:0084758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial membrane protein; coordinates expression of mitochondrially-encoded genes; may facilitate delivery of mRNA to membrane-bound translation machinery","termid":"PBO:0084758"}


id: PBO:0003916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2B subunit","termid":"PBO:0003916"}


id: MONDO:0000850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypochondroplasia (obsolete MONDO:0000850)","termid":"MONDO:0000850","xrefs":{"Monarch":{"xref_id":"0000850"}}}


id: PBO:0076662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thromboxane A1 receptor","termid":"PBO:0076662"}


id: GO:0033688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of osteoblast proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"osteoblast proliferation","termid":"GO:0033687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoblast proliferation","termid":"GO:0033688"}


id: GO:0009186
data:
  {"annotated_genes":["SJAG_02874","SJAG_04665","SJAG_04657","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107055,95279,92233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[70637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009186","terms_by_termid":{"GO:0006227":null,"GO:0006233":null,"GO:0006240":null}}


id: MONDO:0013288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the CD79A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agammaglobulinemia 3, autosomal recessive","secondary_identifiers":["DOID:0081137","MEDGEN:462101","OMIM:613501","GARD:15673","UMLS:C3150751"],"synonyms":[{"name":"AGM3","type":"related"},{"name":"CD79A autosomal agammaglobulinemia","type":"exact"},{"name":"agammaglobulinemia 3, autosomal recessive","type":"exact"},{"name":"agammaglobulinemia, autosomal recessive, due to Cd79A defect","type":"related"},{"name":"autosomal agammaglobulinemia caused by mutation in CD79A","type":"exact"}],"termid":"MONDO:0013288","xrefs":{"Monarch":{"xref_id":"0013288"}}}


id: MOD:00675
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively either removes neutral hydrogen atoms (proton and electron), or adds oxygen atoms to a residue with or without the removal of hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized residue","synonyms":[{"name":"OxRes","type":"exact"}],"termid":"MOD:00675"}


id: MONDO:0600008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that occurs after therapeutic infusion of antibodies into the blood and is characterized by nausea, headache, tachycardia, hypotension, rash, and shortness of breath. It is caused by the release of cytokines from the cells that are targeted by the antibodies. Most patients experience a mild to moderate reaction; however, the reaction may be severe and life-threatening.","definition_xrefs":["PMID:24876563","NCIT:C78251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cytokine release syndrome","secondary_identifiers":["MESH:D000080424","MEDGEN:215297","UMLS:C0948245"],"synonyms":[{"name":"CRS","type":"exact"},{"name":"cytokine storm","type":"exact"},{"name":"cytokine-associated toxicity","type":"exact"}],"termid":"MONDO:0600008","xrefs":{"Monarch":{"xref_id":"0600008"}}}


id: PBO:0048731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1 pseudogene 2","termid":"PBO:0048731"}


id: GO:1902325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chlorophyll biosynthetic process.","definition_xrefs":["PMID:23555952","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll biosynthetic process","termid":"GO:0010380"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"negatively_regulates","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chlorophyll biosynthetic process","synonyms":[{"name":"down regulation of chlorophyll anabolism","type":"exact"},{"name":"down regulation of chlorophyll biosynthesis","type":"exact"},{"name":"down regulation of chlorophyll biosynthetic process","type":"exact"},{"name":"down regulation of chlorophyll formation","type":"exact"},{"name":"down regulation of chlorophyll synthesis","type":"exact"},{"name":"down-regulation of chlorophyll anabolism","type":"exact"},{"name":"down-regulation of chlorophyll biosynthesis","type":"exact"},{"name":"down-regulation of chlorophyll biosynthetic process","type":"exact"},{"name":"down-regulation of chlorophyll formation","type":"exact"},{"name":"down-regulation of chlorophyll synthesis","type":"exact"},{"name":"downregulation of chlorophyll anabolism","type":"exact"},{"name":"downregulation of chlorophyll biosynthesis","type":"exact"},{"name":"downregulation of chlorophyll biosynthetic process","type":"exact"},{"name":"downregulation of chlorophyll formation","type":"exact"},{"name":"downregulation of chlorophyll synthesis","type":"exact"},{"name":"inhibition of chlorophyll anabolism","type":"narrow"},{"name":"inhibition of chlorophyll biosynthesis","type":"narrow"},{"name":"inhibition of chlorophyll biosynthetic process","type":"narrow"},{"name":"inhibition of chlorophyll formation","type":"narrow"},{"name":"inhibition of chlorophyll synthesis","type":"narrow"},{"name":"negative regulation of chlorophyll anabolism","type":"exact"},{"name":"negative regulation of chlorophyll biosynthesis","type":"exact"},{"name":"negative regulation of chlorophyll formation","type":"exact"},{"name":"negative regulation of chlorophyll synthesis","type":"exact"}],"termid":"GO:1902325"}


id: SO:0001441
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codons TTT and TTC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine","synonyms":[{"name":"F","type":"exact"},{"name":"Phe","type":"exact"}],"termid":"SO:0001441"}


id: PBO:0046203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin B","termid":"PBO:0046203"}


id: PBO:0084755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix iron chaperone; oxidizes and stores iron; interacts with Isu1p to promote Fe-S cluster assembly; mutation results in multiple Fe/S-dependent enzyme deficiencies; human frataxin homolog FXN is mutated in Friedrich's ataxia; human FTL gene can complement yeast yfh1 null mutant","termid":"PBO:0084755"}


id: PBO:0066919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 221","termid":"PBO:0066919"}


id: MONDO:0001472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the testis and is not associated with lymphoma in another anatomic site.","definition_xrefs":["NCIT:C6810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular sex cord-stromal neoplasm","termid":"MONDO:0003125"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular lymphoma","secondary_identifiers":["ONCOTREE:TLYM","SCTID:277664004","UMLS:C0349644","DOID:12253","ICD9:186.9","MEDGEN:138110"],"synonyms":[{"name":"TLYM","type":"related"},{"name":"lymphoma of testis","type":"exact"},{"name":"lymphoma of the testis","type":"exact"},{"name":"malignant lymphoma of testis","type":"exact"},{"name":"primary testicular lymphoma","type":"exact"},{"name":"testicular lymphoma","type":"exact"}],"termid":"MONDO:0001472","xrefs":{"Monarch":{"xref_id":"0001472"}}}


id: PBO:0079538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UAP1 divergent transcript","termid":"PBO:0079538"}


id: FYPO:0006549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which gene expression occurs to a lower extent than normal. One or more parts of gene expression, such as transcription or translation, may be affected, and all genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased gene expression","synonyms":[{"name":"reduced gene expression","type":"exact"}],"termid":"FYPO:0006549"}


id: GO:0045436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of beta rings at one or both ends of the lycopene molecule (psi, psi-carotene) to form gamma-carotene or the bicyclic beta-carotene (beta, beta-carotene), respectively.","definition_xrefs":["PMID:8837512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0009975","GO:0003824"],"is_obsolete":false,"name":"lycopene beta cyclase activity","secondary_identifiers":["RHEA:32219","MetaCyc:RXN1F-150"],"synonyms":[{"name":"crtL","type":"related"},{"name":"lycopene cyclase","type":"broad"}],"termid":"GO:0045436"}


id: PBO:0063051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein associated with LIN7 2, MAGUK p55 family member","termid":"PBO:0063051"}


id: PBO:0084076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein (mammalian Ranp homolog); involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); not required for viability; protein abundance increases in response to DNA replication stress; GSP2 has a paralog, GSP1, that arose from the whole genome duplication","termid":"PBO:0084076"}


id: PBO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, DUF3321 family","termid":"PBO:0000313"}


id: GO:2000011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adaxial/abaxial pattern formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"adaxial/abaxial pattern specification","termid":"GO:0009955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adaxial/abaxial pattern formation","synonyms":[{"name":"regulation of adaxial/abaxial pattern specification","type":"related"}],"termid":"GO:2000011"}


id: PBO:0072795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 1","termid":"PBO:0072795"}


id: GO:0006817
data:
  {"annotated_genes":["SJAG_01059","SJAG_04241","SJAG_01033","SJAG_04990","SJAG_00547","SJAG_00233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990547"},{"annotations":[115583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180029"},{"annotations":[112520,109493,116298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035435"},{"annotations":[99198],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"The directed movement of phosphate ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_00547":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_04241":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"phosphate ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphate transport","type":"related"}],"termid":"GO:0006817","terms_by_termid":{"GO:0035435":null,"GO:0180029":null,"GO:1990547":null,"GO:2000185":null}}


id: SO:1000148
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal translocation whereby the first two breaks are in the same chromosome, and the region between them is rejoined in inverted order to the other side of the first break, such that both sides of break one are present on the same chromosome. The remaining free ends are joined as a translocation with those resulting from the third break.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"},{"relation_name":"is_a","term_name":"chromosomal_translocation","termid":"SO:1000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_cum_translocation","synonyms":[{"name":"(Drosophila)InT","type":"related"},{"name":"(Drosophila)T","type":"related"},{"name":"inversion cum translocation","type":"exact"}],"termid":"SO:1000148"}


id: GO:1901099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction in absence of ligand.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"negatively_regulates","term_name":"signal transduction in absence of ligand","termid":"GO:0038034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of signal transduction in absence of ligand","synonyms":[{"name":"down regulation of basal signaling","type":"narrow"},{"name":"down regulation of non-classical signal transduction","type":"broad"},{"name":"down regulation of signal transduction in absence of agonist","type":"exact"},{"name":"down regulation of signal transduction in absence of ligand","type":"exact"},{"name":"down-regulation of basal signaling","type":"narrow"},{"name":"down-regulation of non-classical signal transduction","type":"broad"},{"name":"down-regulation of signal transduction in absence of agonist","type":"exact"},{"name":"down-regulation of signal transduction in absence of ligand","type":"exact"},{"name":"downregulation of basal signaling","type":"narrow"},{"name":"downregulation of non-classical signal transduction","type":"broad"},{"name":"downregulation of signal transduction in absence of agonist","type":"exact"},{"name":"downregulation of signal transduction in absence of ligand","type":"exact"},{"name":"inhibition of signal transduction in absence of ligand","type":"narrow"},{"name":"negative regulation of non-classical signal transduction","type":"broad"},{"name":"negative regulation of signal transduction in absence of agonist","type":"exact"}],"termid":"GO:1901099"}


id: GO:0070132
data:
  {"annotated_genes":["SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process preceding formation of the peptide bond between the first two amino acids of a protein in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translation","termid":"GO:0070129"},{"relation_name":"regulates","term_name":"mitochondrial translational initiation","termid":"GO:0070124"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467"],"is_obsolete":false,"name":"regulation of mitochondrial translational initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrial translation initiation","type":"exact"}],"termid":"GO:0070132","terms_by_termid":{"GO:0070134":null}}


id: GO:0033913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->2)-glucosidic linkages in (1->2)-beta-D-glucans.","definition_xrefs":["EC:3.2.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"glucan endo-1,2-beta-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.71-RXN"],"synonyms":[{"name":"1,2-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"beta-D-1,2-glucanase activity","type":"related"},{"name":"endo-(1->2)-beta-D-glucanase activity","type":"related"},{"name":"endo-1,2-beta-glucanase activity","type":"related"}],"termid":"GO:0033913"}


id: MONDO:0006956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of infectious diseases that is caused by Rickettsia.","definition_xrefs":["NCIT:C34991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rickettsiosis","secondary_identifiers":["ICD9:083.9","MESH:D012282","UMLS:C0035585","GARD:19827","Orphanet:102021","ICD10CM:A75-A79","MedDRA:10061495","EFO:1001162","MEDGEN:20584","SCTID:37246009"],"synonyms":[{"name":"Rickettsia caused disease or disorder","type":"exact"},{"name":"Rickettsia disease or disorder","type":"exact"},{"name":"Rickettsia infection","type":"exact"},{"name":"Rickettsia infectious disease","type":"exact"},{"name":"Rickettsiae disease","type":"exact"},{"name":"Rickettsial disease","type":"exact"},{"name":"Rickettsial infectious disease","type":"exact"},{"name":"Rickettsial infectious disorder","type":"exact"},{"name":"Rickettsiosis","type":"exact"},{"name":"infection, Rickettsia","type":"exact"},{"name":"infections, Rickettsia","type":"exact"}],"termid":"MONDO:0006956","xrefs":{"Monarch":{"xref_id":"0006956"}}}


id: PBO:0068680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 61, pseudogene","termid":"PBO:0068680"}


id: PBO:0043231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 3","termid":"PBO:0043231"}


id: PBO:0001784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2',3'-cyclic-nucleotide 3'-phosphodiesterase (predicted)","termid":"PBO:0001784"}


id: PBO:0087186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase subunit ABC10-alpha, found in RNA pol I, II, and III; relocalizes from nucleolus to cytoplasm upon DNA replication stress","termid":"PBO:0087186"}


id: GO:0072360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the vascular cord over time from its initial formation until its mature state. The vascular cord is the primordial vasculature that will develop into blood vessels by the process of tubulogenesis.","definition_xrefs":["PMID:7084422","ZFA:0005077","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"circulatory system development","termid":"GO:0072359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular cord development","termid":"GO:0072360"}


id: PBO:0060004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 24","termid":"PBO:0060004"}


id: PBO:0035841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ribosomal_S6_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0035841"}


id: PBO:0002158
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds Homol D","termid":"PBO:0002158"}


id: GO:0030786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (RS)-norcoclaurine = S-adenosyl-L-homocysteine + (RS)-coclaurine.","definition_xrefs":["EC:2.1.1.128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"(RS)-norcoclaurine 6-O-methyltransferase activity","secondary_identifiers":["RHEA:19941","MetaCyc:2.1.1.128-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:(RS)-norcoclaurine 6-O-methyltransferase activity","type":"related"}],"termid":"GO:0030786"}


id: PBO:0044803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 103B","termid":"PBO:0044803"}


id: GO:0006014
data:
  {"annotated_genes":["SJAG_03174","SJAG_00070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74299],"is_not":false,"summary":null,"term":"GO:0006014"},{"annotations":[58540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-ribose (ribo-pentose). As beta-D-ribofuranose, D-ribose forms the glycose group of all ribonucleosides, ribonucleotides and ribonucleic acids, and also of ribose phosphates, various glycosides, some coenzymes and some forms of vitamin B12.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_03174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"D-ribose metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"D-ribose metabolism","type":"exact"}],"termid":"GO:0006014","terms_by_termid":{"GO:0006014":null,"GO:0019303":null}}


id: GO:0016273
data:
  {"annotated_genes":["SJAG_02271","SJAG_03548","SJAG_02756","SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008469"},{"annotations":[80064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019702"},{"annotations":[112458,100223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035242"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a methyl group from S-adenosyl-L-methionine to an amino group of an arginine residue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_02271":null,"SJAG_02756":null,"SJAG_03548":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"arginine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016273","terms_by_termid":{"GO:0008469":null,"GO:0019702":null,"GO:0035242":null}}


id: PBO:0079175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 4","termid":"PBO:0079175"}


id: GO:0022015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of a radial glial cell in the pallium. A radial glial cell is a precursor cell that gives rise to neurons and astrocytes.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"pallium cell proliferation in forebrain","termid":"GO:0022013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glial cell division in pallium","termid":"GO:0022015"}


id: GO:0034590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-hydroxyproline from one side of a membrane to the other.","definition_xrefs":["GOC:mah","PMID:14502423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-hydroxyproline transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-6784213"],"synonyms":[{"name":"4-hydroxyproline transmembrane transporter activity","type":"broad"}],"termid":"GO:0034590"}


id: MONDO:0006871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly malignant choriocarcinoma derived from the non-placental origin such as the totipotent cells in the testis, the ovary, and the pineal gland. It produces high levels of chorionic gonadotropin and can metastasize widely through the bloodstream to the lungs, brain, liver, bone, and other viscera by the time of diagnosis.","definition_xrefs":["MESH:D031954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choriocarcinoma","termid":"MONDO:0005207"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-gestational choriocarcinoma","secondary_identifiers":["EFO:1001064","DOID:4320","UMLS:C1135873","MEDGEN:211656"],"termid":"MONDO:0006871","xrefs":{"Monarch":{"xref_id":"0006871"}}}


id: MONDO:0859352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 79","secondary_identifiers":["OMIM:620196","DOID:0070578","UMLS:C5774290","MEDGEN:1824063"],"termid":"MONDO:0859352","xrefs":{"Monarch":{"xref_id":"0859352"}}}


id: PBO:0001204
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.21","termid":"PBO:0001204"}


id: PBO:0057521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 639","termid":"PBO:0057521"}


id: PBO:0004796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation protein Meu14","termid":"PBO:0004796"}


id: MONDO:0014796
data:
  {"annotated_genes":["SJAG_16459","SJAG_01229"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85593,85594],"is_not":false,"summary":null,"term":"MONDO:0014796"}]},"cv_name":"mondo","definition":"Any young-onset Parkinson disease in which the cause of the disease is a mutation in the VPS13C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01229":null,"SJAG_16459":null},"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive early-onset Parkinson disease 23","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616840","UMLS:C4225186","DOID:0060896","MEDGEN:896607","GARD:18610"],"synonyms":[{"name":"PARK23","type":"exact"},{"name":"Parkinson disease 23, autosomal recessive early-onset","type":"exact"},{"name":"Parkinson disease 23, autosomal recessive, early onset","type":"exact"},{"name":"VPS13C young-onset Parkinson disease","type":"exact"},{"name":"autosomal recessive early-onset Parkinson disease 23","type":"exact"},{"name":"autosomal recessive early-onset Parkinson's disease 23","type":"related"},{"name":"autosomal recessive early-onset Parksinson disease type 23","type":"exact"},{"name":"young-onset Parkinson disease caused by mutation in VPS13C","type":"exact"}],"termid":"MONDO:0014796","terms_by_termid":{"MONDO:0014796":null},"xrefs":{"Monarch":{"xref_id":"0014796"}}}


id: PBO:0041511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 178","termid":"PBO:0041511"}


id: MONDO:0002242
data:
  {"annotated_genes":["SJAG_02839"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009206"}]},"cv_name":"mondo","definition":"Congenital or acquired deficiency of one of the coagulation factors. It results in bleeding.","definition_xrefs":["NCIT:C27215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02839":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"coagulation protein disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0600503","DOID:2212","SCTID:86075001","MEDGEN:108723","MESH:D020147"],"synonyms":[{"name":"coagulation factor deficiency","type":"exact"},{"name":"coagulation factor deficiency syndrome","type":"exact"}],"termid":"MONDO:0002242","terms_by_termid":{"MONDO:0009206":null},"xrefs":{"Monarch":{"xref_id":"0002242"}}}


id: PBO:0041354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C4B (Chido blood group)","termid":"PBO:0041354"}


id: GO:0160039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when the biogenic amine serotonin has been bound by the channel complex or one of its constituent parts. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["PMID:11100728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"serotonin receptor activity","termid":"GO:0099589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"serotonin-gated chloride channel activity","secondary_identifiers":["TC:1.A.9","Wikipedia:Ligand-gated_ion_channel"],"termid":"GO:0160039"}


id: FYPO:0008171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nuclear pore complexes are more clustered together than normal.","definition_xrefs":["PMID:35354597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased nuclear pore complex clustering","termid":"FYPO:0008171"}


id: MONDO:0006286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the major salivary glands. It usually arises from the parotid gland. It is the most common primary carcinoma of the salivary glands and usually presents as a firm and painless mass. It is characterized by the presence of epidermoid cells, mucus producing cells, and cells of intermediate type. The majority of cases have a favorable outcome.","definition_xrefs":["NCIT:C5906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"major salivary gland carcinoma","termid":"MONDO:0006284"},{"relation_name":"is_a","term_name":"salivary gland mucoepidermoid carcinoma","termid":"MONDO:0021009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"major salivary gland mucoepidermoid carcinoma","secondary_identifiers":["UMLS:C1334551","MEDGEN:233139","EFO:1000346"],"synonyms":[{"name":"major salivary gland mucoepidermoid cancer","type":"exact"},{"name":"major salivary gland mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of Major salivary gland","type":"exact"},{"name":"mucoepidermoid carcinoma of the Major salivary gland","type":"exact"}],"termid":"MONDO:0006286","xrefs":{"Monarch":{"xref_id":"0006286"}}}


id: PBO:0066871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 171","termid":"PBO:0066871"}


id: MONDO:0030810
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86771,86772],"is_not":false,"summary":null,"term":"MONDO:0030810"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1807702","UMLS:C5676981","OMIM:619868"],"synonyms":[{"name":"PFIC10","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 10","type":"exact"}],"termid":"MONDO:0030810","terms_by_termid":{"MONDO:0030810":null},"xrefs":{"Monarch":{"xref_id":"0030810"}}}


id: GO:0010501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a secondary structure of RNA are broken or 'melted'.","definition_xrefs":["PMID:17169986"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA secondary structure unwinding (obsolete GO:0010501)","synonyms":[{"name":"RNA duplex unwinding","type":"exact"}],"termid":"GO:0010501"}


id: PBO:0045189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 2","termid":"PBO:0045189"}


id: PBO:0040653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bublin coiled coil protein","termid":"PBO:0040653"}


id: MONDO:0020315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Unclassified myelodysplastic syndrome (MDS-U) is a subtype of myelodysplastic syndrome (MDS) with atypical features of uncertain clinical significance.","definition_xrefs":["Orphanet:98827"],"gene_count":0,"genotype_count":0,"name":"obsolete unclassified myelodysplastic syndrome (obsolete MONDO:0020315)","secondary_identifiers":["icd11.foundation:1684468291"],"termid":"MONDO:0020315","xrefs":{"Monarch":{"xref_id":"0020315"}}}


id: PBO:0005106
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degradation required to stabilize Bqt4 in the nuclear membrane","termid":"PBO:0005106"}


id: GO:0016641
data:
  {"annotated_genes":["SJAG_01881","SJAG_02496","SJAG_00707"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003884"},{"annotations":[114545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043799"},{"annotations":[111621,75608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004733"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an oxygen molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00707":null,"SJAG_01881":null,"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.4.3.-"],"termid":"GO:0016641","terms_by_termid":{"GO:0003884":null,"GO:0004733":null,"GO:0043799":null}}


id: PBO:0025547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin/metalloprotease fusion protein Udp7","termid":"PBO:0025547"}


id: MONDO:0011222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glaucoma 1, open angle, D (obsolete MONDO:0011222)","secondary_identifiers":["OMIM:602429","MESH:C566551"],"synonyms":[{"name":"GLC1D","type":"exact"},{"name":"glaucoma 1, open angle, D","type":"exact"},{"name":"glaucoma 1D, primary open angle","type":"exact"},{"name":"glaucoma, primary open angle, adult-onset","type":"related"}],"termid":"MONDO:0011222","xrefs":{"Monarch":{"xref_id":"0011222"}}}


id: PBO:0053359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 265-2, pseudogene","termid":"PBO:0053359"}


id: MONDO:0011740
data:
  {"annotated_genes":["SJAG_02398","SJAG_00260","SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85198,85199,85200],"is_not":false,"summary":null,"term":"MONDO:0011740"}]},"cv_name":"mondo","definition":"Carney-Stratakis syndrome is a recently described familial syndrome characterized by gastrointestinal stromal tumors (GIST) and paragangliomas, often at multiple sites.","definition_xrefs":["Orphanet:97286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple polyglandular tumor","termid":"MONDO:0015079"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"Carney-Stratakis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C564650","SCTID:722377004","NCIT:C94831","OMIM:606864","UMLS:C1847319","DOID:0080533","GARD:10643","MEDGEN:376098"],"synonyms":[{"name":"Carney dyad","type":"exact"},{"name":"Carney-Stratakis dyad","type":"exact"},{"name":"Carney-Stratakis dyad of paraganglioma and gastric stromal sarcoma","type":"related"},{"name":"Carney-Stratakis syndrome","type":"exact"},{"name":"gist-paraganglioma dyad","type":"exact"},{"name":"paraganglioma and gastric stromal sarcoma","type":"exact"},{"name":"paraganglioma and gastrointestinal stromal tumor","type":"related"},{"name":"paraganglioma and gastrointestinal stromal tumour","type":"related"},{"name":"paraganglioma and gist","type":"related"}],"termid":"MONDO:0011740","terms_by_termid":{"MONDO:0011740":null},"xrefs":{"Monarch":{"xref_id":"0011740"}}}


id: GO:0090001
data:
  {"annotated_genes":["SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99167],"is_not":false,"summary":null,"term":"GO:0090001"}]},"cv_name":"biological_process","definition":"A process that impedes the progress of the DNA replication fork at natural replication fork pausing sites within the eukaryotic tRNA transcription unit.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork arrest","termid":"GO:0043111"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"replication fork arrest at tRNA locus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090001","terms_by_termid":{"GO:0090001":null}}


id: PBO:0039388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylase alpha 2B","termid":"PBO:0039388"}


id: PBO:0117144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain 3 tRNA guanosine methyltransferase","termid":"PBO:0117144"}


id: PBO:0039072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC component 4","termid":"PBO:0039072"}


id: PBO:0057075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 154","termid":"PBO:0057075"}


id: PR:O74472
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug33 gene.","definition_xrefs":["UniProtKB:O74472","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 33 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.10","synonyms":[{"name":"Spom972h-mug33","type":"exact"}],"termid":"PR:O74472"}


id: MONDO:1012068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dystrophic epidermolysis bullosa, non-human animal","termid":"MONDO:1011737"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophic epidermolysis bullosa, dog","secondary_identifiers":["OMIA:000341-9615"],"termid":"MONDO:1012068","xrefs":{"Monarch":{"xref_id":"1012068"}}}


id: PBO:0066968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 270","termid":"PBO:0066968"}


id: MONDO:0004142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of large cell neuroendocrine lung carcinoma characterized by the presence of large neuroendocrine cells in combination with adenocarcinoma, squamous cell carcinoma, giant cell carcinoma and/ or spindle cell carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary large cell neuroendocrine carcinoma","termid":"MONDO:0003960"},{"relation_name":"is_a","term_name":"combined lung carcinoma","termid":"MONDO:0006167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung combined large cell neuroendocrine carcinoma","secondary_identifiers":["MEDGEN:232386","UMLS:C1333122","DOID:7207","NCIT:C7267"],"synonyms":[{"name":"combined large cell lung neuroendocrine carcinoma","type":"exact"},{"name":"combined large cell neuroendocrine carcinoma of lung","type":"exact"},{"name":"combined large cell neuroendocrine carcinoma of the lung","type":"exact"},{"name":"pulmonary combined large cell neuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0004142","xrefs":{"Monarch":{"xref_id":"0004142"}}}


id: GO:0061113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis of the pancreas. Morphogenesis is the process in which anatomical structures are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"pancreas development","termid":"GO:0031016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas morphogenesis","termid":"GO:0061113"}


id: PBO:0075842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 3","termid":"PBO:0075842"}


id: MONDO:0021644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal varices","termid":"MONDO:0001221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal varices without bleeding","secondary_identifiers":["UMLS:C0267092","MEDGEN:540382","SCTID:14223005","ICD10CM:I85.00","ICD9:456.1"],"synonyms":[{"name":"esophageal varices without bleeding","type":"exact"}],"termid":"MONDO:0021644","xrefs":{"Monarch":{"xref_id":"0021644"}}}


id: PBO:0029235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis_during_cellular_response_to_salt_stress","termid":"PBO:0029235"}


id: PBO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad6 homolog, ubiquitin conjugating enzyme E2 Rhp6","termid":"PBO:0000269"}


id: PBO:0011115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic dynein intermediate light chain Dli1/Dil1","termid":"PBO:0011115"}


id: MONDO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of sporadic and inherited neurodegenerative disorders affecting the cerebellum, pons, and inferior olives.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"olivopontocerebellar atrophy","secondary_identifiers":["icd11.foundation:1467584080","SCTID:67761004","MEDGEN:10435","DOID:14784","MESH:D009849","ICD9:333.0","UMLS:C0028968","NCIT:C84947"],"synonyms":[{"name":"Dejerine-Thomas syndrome","type":"exact"},{"name":"OPCA","type":"related"},{"name":"Thomas' syndrome","type":"related"},{"name":"WADIA-swami syndrome","type":"exact"}],"termid":"MONDO:0002017","xrefs":{"Monarch":{"xref_id":"0002017"}}}


id: GO:0009880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the patterns of cell differentiation that will arise in an embryo.","definition_xrefs":["GOC:go_curators","ISBN:0521436125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic pattern specification","synonyms":[{"name":"embryonic pattern biosynthesis","type":"broad"},{"name":"embryonic pattern formation","type":"broad"},{"name":"ventral/lateral system","type":"related"}],"termid":"GO:0009880"}


id: GO:0085039
data:
  {"annotated_genes":["SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[118990],"is_not":false,"summary":null,"term":"GO:0085039"}]},"cv_name":"cellular_component","definition":"A host-derived membrane surrounding the symbiont hypha during infection.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyphal membrane","references_by_uniquename":{"PMID:30726171":null},"synonyms":[{"name":"extra-invasive hyphal membrane","type":"related"}],"termid":"GO:0085039","terms_by_termid":{"GO:0085039":null}}


id: MONDO:0015861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare uterine adnexal tumor (obsolete MONDO:0015861)","secondary_identifiers":["Orphanet:180220"],"synonyms":[{"name":"syn: Rare tumor of ovaries and fallopian tubes","type":"exact"}],"termid":"MONDO:0015861","xrefs":{"Monarch":{"xref_id":"0015861"}}}


id: PBO:0047260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member C","termid":"PBO:0047260"}


id: PBO:0087989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ser) Um(44) 2'-O-methyltransferase; involved in maintaining levels of the tRNA-Ser species tS(CGA) and tS(UGA); conserved among metazoans and fungi but there does not appear to be a homolog in plants; TRM44 is a non-essential gene","termid":"PBO:0087989"}


id: MONDO:0020303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Angelman syndrome","termid":"MONDO:0007113"},{"relation_name":"is_a","term_name":"chromosome 15 disorder","termid":"MONDO:0700022"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Angelman syndrome due to paternal uniparental disomy of chromosome 15","secondary_identifiers":["UMLS:C5680342","MEDGEN:1826078","Orphanet:98795","GARD:19578"],"synonyms":[{"name":"Angelman syndrome due to paternal uniparental disomy of chromosome type 15","type":"exact"},{"name":"UPD(15)pat","type":"exact"}],"termid":"MONDO:0020303","xrefs":{"Monarch":{"xref_id":"0020303"}}}


id: MOD:01714
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl with one of the Applied Biosystems iTRAQ8plex reagent reporter+balance acyloxy groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent O-acylated residue","termid":"MOD:01707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex reporter+balance reagent O-acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01714"}


id: PR:Q09708
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12G12.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12G12.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.16c","synonyms":[{"name":"Spom972h-SPAC12G12.16c","type":"exact"}],"termid":"PR:Q09708"}


id: FYPO:0001960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA topoisomerase II activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal DNA topoisomerase II activity","synonyms":[{"name":"abnormal DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity","type":"exact"}],"termid":"FYPO:0001960"}


id: MONDO:0021101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine tumor arising from the wall of the appendix, producing glucagon-like peptides. Morphologically, it is characterized by the presence of neoplastic cells forming tubular or trabecular patterns.","definition_xrefs":["NCIT:C27445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic L-cell glucagon-like peptide producing tumor","termid":"MONDO:0004210"},{"relation_name":"is_a","term_name":"neuroendocrine tumor of the appendix, well differentiated, low or intermediate grade","termid":"MONDO:0015066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"appendix L-cell glucagon-like peptide-producing neuroendocrine tumor","secondary_identifiers":["MEDGEN:475771","UMLS:C3274138","DOID:8151"],"synonyms":[{"name":"L-cell glucagon-like peptide-producing neuroendocrine tumor of vermiform appendix","type":"exact"},{"name":"L-cell glucagon-like peptide-producing neuroendocrine tumour of vermiform appendix","type":"exact"},{"name":"appendiceal L-cell glucagon-like peptide producing tumor","type":"related"},{"name":"appendiceal L-cell glucagon-like peptide producing tumour","type":"related"},{"name":"appendiceal L-cell glucagon-like peptide-producing NET","type":"related"},{"name":"appendiceal L-cell glucagon-like peptide-producing neuroendocrine tumor","type":"related"},{"name":"appendiceal L-cell glucagon-like peptide-producing neuroendocrine tumour","type":"related"},{"name":"appendix L-cell NET","type":"related"},{"name":"appendix L-cell glucagon-like peptide-producing NET","type":"related"},{"name":"appendix L-cell glucagon-like peptide-producing neuroendocrine tumor","type":"exact"},{"name":"malignant appendiceal L-cell glucagon-like peptide producing tumor","type":"exact"},{"name":"malignant appendiceal L-cell glucagon-like peptide producing tumour","type":"exact"},{"name":"malignant appendiceal glucagonoma","type":"exact"},{"name":"vermiform appendix L-cell glucagon-like peptide-producing neuroendocrine tumor","type":"exact"},{"name":"vermiform appendix L-cell glucagon-like peptide-producing neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0021101","xrefs":{"Monarch":{"xref_id":"0021101"}}}


id: FYPO:0005047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at RNA polymerase II promoters is decreased.","definition_xrefs":["PomBase:mah","PMID:20605454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","termid":"FYPO:0004161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II promoter during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II promoter during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at RNA pol II promoter during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II promoter during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromatin at RNA polymerase II promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0005047"}


id: PBO:0066778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 76","termid":"PBO:0066778"}


id: PBO:0069383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 643, pseudogene","termid":"PBO:0069383"}


id: GO:2000729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal cell proliferation involved in ureter development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell proliferation","termid":"GO:0002053"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation involved in ureter development","termid":"GO:0072199"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell proliferation involved in ureter development","termid":"GO:0072198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell proliferation involved in ureter development","synonyms":[{"name":"positive regulation of ureter mesenchymal cell proliferation","type":"related"},{"name":"positive regulation of ureteral mesenchymal cell proliferation","type":"related"}],"termid":"GO:2000729"}


id: PBO:0016573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh6","termid":"PBO:0016573"}


id: GO:0005156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor receptor inhibiting ligand activity (obsolete GO:0005156)","synonyms":[{"name":"EGF receptor inhibiting ligand activity","type":"exact"},{"name":"EGFR inhibiting ligand activity","type":"exact"},{"name":"epidermal growth factor receptor inhibiting ligand activity","type":"exact"}],"termid":"GO:0005156"}


id: MONDO:0015034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type A (LCHa) is a form of lissencephaly with cerebellar hypoplasia that encompasses classical lissencephaly with thickened cortical gray matter with either no discernible gradient, a gradient with posterior predominance, or a gradient with anterior predominance, and cerebellar vermis hypoplasia.","definition_xrefs":["Orphanet:100011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type A","secondary_identifiers":["icd11.foundation:853428618","MEDGEN:1679234","GARD:19731","UMLS:C5191423"],"termid":"MONDO:0015034","xrefs":{"Monarch":{"xref_id":"0015034"}}}


id: PBO:0059125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple PDZ domain crumbs cell polarity complex component","termid":"PBO:0059125"}


id: GO:1904946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalt(II) acetate stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:24315322","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to cobalt(II) acetate (obsolete GO:1904946)","termid":"GO:1904946"}


id: PBO:0026945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_level_oscillation_during_mitotic_cell_cycle","termid":"PBO:0026945"}


id: MONDO:0012401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital stromal corneal dystrophy (CSCD) is an extremely rare form of stromal corneal dystrophy characterized by opaque flaky or feathery clouding of the corneal stroma, and moderate to severe visual loss.","definition_xrefs":["Orphanet:101068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"stromal corneal dystrophy","termid":"MONDO:0020213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital stromal corneal dystrophy","secondary_identifiers":["OMIM:610048","icd11.foundation:1796933876","UMLS:C1864738","DOID:0060445","ICD9:371.56","SCTID:702359002","MESH:C566452","GARD:16943","MEDGEN:400601"],"synonyms":[{"name":"CSCD","type":"exact"},{"name":"Witschel dystrophy","type":"exact"},{"name":"congenital hereditary stromal dystrophy","type":"exact"},{"name":"congenital stromal corneal dystrophy","type":"exact"},{"name":"corneal dystrophy, congenital stromal","type":"related"}],"termid":"MONDO:0012401","xrefs":{"Monarch":{"xref_id":"0012401"}}}


id: PBO:0017766
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M Twenty Six binding protein","termid":"PBO:0017766"}


id: GO:1901848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotinate.","definition_xrefs":["UniPathway:UPA00830","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"},{"relation_name":"is_a","term_name":"nicotinate metabolic process","termid":"GO:1901847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"nicotinate catabolic process","synonyms":[{"name":"nicotinate breakdown","type":"exact"},{"name":"nicotinate catabolism","type":"exact"},{"name":"nicotinate degradation","type":"exact"}],"termid":"GO:1901848"}


id: PBO:0050974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 19","termid":"PBO:0050974"}


id: PBO:0043153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 21","termid":"PBO:0043153"}


id: GO:1990877
data:
  {"annotated_genes":["SJAG_04910","SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95887,106944],"is_not":false,"summary":null,"term":"GO:1990877"}]},"cv_name":"cellular_component","definition":"A heterodimeric complex that functions as a GTPase-Activating Protein (GAP) Complex for members of the Rag family of GTPases. In the budding yeast, this complex contains Lst4 and Lst7, while the orthologous mammalian complex contains follicular (FLCN) and either follicular interacting protein 1 (FNIP1) or FNIP2.","definition_xrefs":["PMID:26387955","PMID:34805795","GOC:rn","PMID:24095279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase activator complex","termid":"GO:1902773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02231":null,"SJAG_04910":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"FNIP-folliculin RagC/D GAP","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"BFC complex","type":"exact"},{"name":"FLCN-FNIP1 complex","type":"exact"},{"name":"FLCN-FNIP2 complex","type":"exact"},{"name":"FNIP-Folliculin RagC/D GAP complex","type":"exact"},{"name":"Lst4-Lst7 complex","type":"exact"}],"termid":"GO:1990877","terms_by_termid":{"GO:1990877":null}}


id: GO:0141194
data:
  {"annotated_genes":["SJAG_01540","SJAG_01008","SJAG_02119","SJAG_04030","SJAG_04574","SJAG_00058","SJAG_03356","SJAG_01601","SJAG_04061","SJAG_03916","SJAG_02621","SJAG_00756","SJAG_04253","SJAG_02725","SJAG_02409","SJAG_02594","SJAG_04141","SJAG_03193","SJAG_03680","SJAG_03042","SJAG_00087","SJAG_01331","SJAG_00414","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113781],"is_not":false,"summary":null,"term":"GO:0141194"},{"annotations":[106109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"},{"annotations":[88622,114095,115216,117778,110448,111004,117495,118612,95130,99370,115780,96527,106349,93889,110282,98932,114362,88567,91068,117892,112004,113462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"}]},"cv_name":"biological_process","definition":"The formation of heterochromatin into a heterochromatin domain by a process mediated by a small interfering siRNA.","definition_xrefs":["GOC:pg","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0031048"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00087":null,"SJAG_00414":null,"SJAG_00756":null,"SJAG_01008":null,"SJAG_01331":null,"SJAG_01540":null,"SJAG_01601":null,"SJAG_02119":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_03042":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04030":null,"SJAG_04061":null,"SJAG_04141":null,"SJAG_04253":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"siRNA-mediated heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141194","terms_by_termid":{"GO:0140727":null,"GO:0141194":null,"GO:1902795":null}}


id: PBO:0090541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 family mitochondrial ATPase/chaperone Afg1","termid":"PBO:0090541"}


id: MONDO:0013773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any porencephaly in which the cause of the disease is a mutation in the COL4A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial porencephaly","termid":"MONDO:0020496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porencephaly 2","secondary_identifiers":["DOID:0112314","GARD:15808","UMLS:C3280970","OMIM:614483","MEDGEN:482600"],"synonyms":[{"name":"COL4A2 porencephaly","type":"exact"},{"name":"POREN2","type":"related"},{"name":"brain small vessel disease 2","type":"exact"},{"name":"porencephaly 2","type":"exact"},{"name":"porencephaly caused by mutation in COL4A2","type":"exact"},{"name":"porencephaly type 2","type":"exact"}],"termid":"MONDO:0013773","xrefs":{"Monarch":{"xref_id":"0013773"}}}


id: GO:0090310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of DNA methylation-dependent heterochromatin formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heterochromatin formation","termid":"GO:0031452"},{"relation_name":"negatively_regulates","term_name":"DNA methylation-dependent constitutive heterochromatin formation","termid":"GO:0006346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"negative regulation of DNA methylation-dependent heterochromatin formation","synonyms":[{"name":"negative regulation of DNA methylation-dependent heterochromatin assembly","type":"exact"},{"name":"negative regulation of methylation-dependent chromatin silencing","type":"broad"}],"termid":"GO:0090310"}


id: GO:0009040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-ureidoglycolate + NAD(P)+ = oxalureate + NAD(P)H + H+.","definition_xrefs":["PMID:23284870","EC:1.1.1.154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ureidoglycolate dehydrogenase activity","secondary_identifiers":["MetaCyc:R165-RXN"],"synonyms":[{"name":"(S)-ureidoglycolate:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0009040"}


id: PBO:0086270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein tyrosine phosphatase; involved in cell cycle control and retrograde protein transport; regulates the phosphorylation state of Cdc28p; modulates phosphorylation of retromer component Vps26p; homolog of S. pombe cdc25","termid":"PBO:0086270"}


id: PBO:0109121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoside hydrolase family protein Ghs2","termid":"PBO:0109121"}


id: PBO:0029071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_reactive_oxygen_species_level_during_vegetative_growth","termid":"PBO:0029071"}


id: GO:0033479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-D-galacturonate, a substance composed of galacturonic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-D-galacturonate metabolic process","synonyms":[{"name":"UDP-D-galacturonate metabolism","type":"exact"}],"termid":"GO:0033479"}


id: PBO:0027496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mevastatin","termid":"PBO:0027496"}


id: PBO:0085308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase with a broad substrate specificity; has some similarity to GPM1/YKL152C, a phosphoglycerate mutase; YOR283W is not an essential gene","termid":"PBO:0085308"}


id: PBO:0044551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein kinase 2","termid":"PBO:0044551"}


id: PBO:0052442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 2","termid":"PBO:0052442"}


id: MONDO:0015599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atopic keratoconjunctivitis is a rare and chronic allergic disease of the cornea and conjunctiva occurring in all age groups characterized by severe itching and burning sensation, conjunctival injection, photophobia and edema with serious cases leading to ulceration of the cornea which can result in blindness. It is often associated with atopic dermatitis.","definition_xrefs":["Orphanet:163934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"atopic keratoconjunctivitis","secondary_identifiers":["UMLS:C1274788","SCTID:403434009","ICD10CM:H16.2","icd11.foundation:1941631830","MEDGEN:698110","GARD:20053","ICD9:370.49","MedDRA:10069664"],"termid":"MONDO:0015599","xrefs":{"Monarch":{"xref_id":"0015599"}}}


id: GO:0019136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 2'-deoxynucleoside = ADP + 2'-deoxynucleoside 5'-phosphate.","definition_xrefs":["EC:2.7.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"deoxynucleoside kinase activity","secondary_identifiers":["Reactome:R-HSA-74207","RHEA:12140","MetaCyc:2.7.1.145-RXN"],"synonyms":[{"name":"ATP:deoxynucleoside 5'-phosphotransferase activity","type":"related"},{"name":"D. melanogaster deoxynucleoside kinase activity","type":"related"},{"name":"Dm-dNK","type":"related"},{"name":"Ms-dNK activity","type":"related"},{"name":"ms-dNK","type":"related"},{"name":"multifunctional deoxynucleoside kinase activity","type":"related"},{"name":"multispecific deoxynucleoside kinase activity","type":"related"},{"name":"multisubstrate deoxyribonucleoside kinase activity","type":"related"}],"termid":"GO:0019136"}


id: GO:0042666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into an ectoderm cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of ectodermal cell fate specification","termid":"GO:0042665"},{"relation_name":"negatively_regulates","term_name":"ectodermal cell fate specification","termid":"GO:0001715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ectodermal cell fate specification","synonyms":[{"name":"down regulation of ectodermal cell fate specification","type":"exact"},{"name":"down-regulation of ectodermal cell fate specification","type":"exact"},{"name":"downregulation of ectodermal cell fate specification","type":"exact"},{"name":"inhibition of ectodermal cell fate specification","type":"narrow"},{"name":"negative regulation of ectoderm cell fate specification","type":"exact"},{"name":"suppression of ectoderm cell fate","type":"exact"},{"name":"suppression of ectodermal cell fate","type":"exact"}],"termid":"GO:0042666"}


id: PBO:0068333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 40","termid":"PBO:0068333"}


id: MONDO:1011536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperkalemic periodic paralysis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperkalemic periodic paralysis, non-human animal","termid":"MONDO:1011433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperkalemic periodic paralysis, horse","secondary_identifiers":["OMIA:000785-9796"],"synonyms":[{"name":"HYPP, horse","type":"exact"}],"termid":"MONDO:1011536","xrefs":{"Monarch":{"xref_id":"1011536"}}}


id: PBO:0057427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 549a","termid":"PBO:0057427"}


id: MONDO:0011986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tropical pancreatitis is a rare pancreatic disease of juvenile onset occurring mainly in tropical developing countries and characterized by chronic non-alcoholic pancreatitis manifesting with abdominal pain, steatorrhea and fibrocalculous pancreatopathy. It is also commonly associated with the development of pancreatic calculi and pancreatic cancer at a much higher frequency than seen in ordinary chronic pancreatitis.","definition_xrefs":["Orphanet:103918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary chronic pancreatitis","termid":"MONDO:0008185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"tropical pancreatitis","secondary_identifiers":["SCTID:724540009","GARD:16946","icd11.foundation:1645607956","OMIM:608189","UMLS:C1842402","MEDGEN:334069","MESH:C564276"],"synonyms":[{"name":"TCP","type":"exact"},{"name":"fibrocalculous pancreatic diabetes, susceptibility to","type":"related"},{"name":"tropical calcific chronic pancreatitis","type":"exact"},{"name":"tropical calcific pancreatitis","type":"related"}],"termid":"MONDO:0011986","xrefs":{"Monarch":{"xref_id":"0011986"}}}


id: GO:1902492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sperm capacitation.","definition_xrefs":["PMID:22539676","GOC:TermGenie","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of sperm capacitation","termid":"GO:1902490"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"sperm capacitation","termid":"GO:0048240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sperm capacitation","synonyms":[{"name":"activation of sperm activation","type":"related"},{"name":"activation of sperm capacitation","type":"narrow"},{"name":"positive regulation of sperm activation","type":"related"},{"name":"up regulation of sperm activation","type":"related"},{"name":"up regulation of sperm capacitation","type":"exact"},{"name":"up-regulation of sperm activation","type":"related"},{"name":"up-regulation of sperm capacitation","type":"exact"},{"name":"upregulation of sperm activation","type":"related"},{"name":"upregulation of sperm capacitation","type":"exact"}],"termid":"GO:1902492"}


id: FYPO:0002113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable curved vegetative cell","synonyms":[{"name":"curved inviable cell","type":"exact"},{"name":"inviable curved cell","type":"exact"},{"name":"inviable curved cell during vegetative growth","type":"exact"},{"name":"inviable curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved vegetative cell","type":"exact"}],"termid":"FYPO:0002113"}


id: PBO:0053990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1309","termid":"PBO:0053990"}


id: PR:O59676
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdp1 gene.","definition_xrefs":["UniProtKB:O59676","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.13","synonyms":[{"name":"Spom972h-pdp1","type":"exact"},{"name":"set9-associated factor pdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59676"}


id: PBO:0051682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibin subunit beta E","termid":"PBO:0051682"}


id: GO:0018097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of the chromophore S-4-hydroxycinnamyl-L-cysteine.","definition_xrefs":["RESID:AA0207"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-S-4-hydroxycinnamyl-L-cysteine (obsolete GO:0018097)","synonyms":[{"name":"protein amino acid cinnamylation","type":"broad"}],"termid":"GO:0018097"}


id: PBO:0001188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase Jmj2","termid":"PBO:0001188"}


id: GO:0046181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ketogluconate, the anion of ketogluconic acid, an aldonic acid derived from glucose containing a ketonic carbonyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketogluconate metabolic process","termid":"GO:0019522"},{"relation_name":"is_a","term_name":"aldonic acid catabolic process","termid":"GO:0046176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"ketogluconate catabolic process","synonyms":[{"name":"ketogluconate breakdown","type":"exact"},{"name":"ketogluconate catabolism","type":"exact"},{"name":"ketogluconate degradation","type":"exact"}],"termid":"GO:0046181"}


id: MONDO:1012114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypomyelinogenesis, non-human animal","termid":"MONDO:1011845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypomyelinogenesis, dog","secondary_identifiers":["OMIA:000527-9615"],"termid":"MONDO:1012114","xrefs":{"Monarch":{"xref_id":"1012114"}}}


id: MONDO:0030819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meckel syndrome 14","secondary_identifiers":["UMLS:C5676989","MEDGEN:1809650","OMIM:619879"],"synonyms":[{"name":"MKS14","type":"exact"},{"name":"meckel syndrome 14","type":"exact"}],"termid":"MONDO:0030819","xrefs":{"Monarch":{"xref_id":"0030819"}}}


id: GO:1901108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of granaticin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"granaticin metabolic process","termid":"GO:1901107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"granaticin catabolic process","synonyms":[{"name":"granaticin breakdown","type":"exact"},{"name":"granaticin catabolism","type":"exact"},{"name":"granaticin degradation","type":"exact"}],"termid":"GO:1901108"}


id: GO:0046335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethanolamine (2-aminoethanol), an important water-soluble base of phospholipid (phosphatidylethanolamine).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanolamine metabolic process","termid":"GO:0006580"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ethanolamine biosynthetic process","synonyms":[{"name":"ethanolamine anabolism","type":"exact"},{"name":"ethanolamine biosynthesis","type":"exact"},{"name":"ethanolamine formation","type":"exact"},{"name":"ethanolamine synthesis","type":"exact"}],"termid":"GO:0046335"}


id: PBO:0027050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027050"}


id: PBO:0012307
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in yeast","termid":"PBO:0012307"}


id: PBO:0041320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 72","termid":"PBO:0041320"}


id: PBO:0082648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of serine palmitoyltransferase; responsible along with Lcb2p for the first committed step in sphingolipid synthesis, which is the condensation of serine with palmitoyl-CoA to form 3-ketosphinganine","termid":"PBO:0082648"}


id: GO:0033463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"GGA codon-amino acid adaptor activity","synonyms":[{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033463"}


id: FYPO:0004622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which mitotic spindle disassembly does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle disassembly","termid":"FYPO:0004621"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000337","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitotic spindle disassembly","synonyms":[{"name":"abolished mitotic spindle disassembly during vegetative growth","type":"exact"},{"name":"abolished spindle disassembly during mitotic cell cycle","type":"related"},{"name":"spindle disassembly involved in mitosis abolished","type":"exact"}],"termid":"FYPO:0004622"}


id: PR:Q9UTI6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ethanolamine-phosphate cytidylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01554","PANTHER:PTHR10739:SF14","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine-phosphate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.05c","secondary_identifiers":["UniProtKB:Q9UTI6"],"synonyms":[{"name":"CTP:phosphoethanolamine cytidylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCYT2","type":"exact"},{"name":"phosphorylethanolamine transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI6"}


id: GO:0099117
data:
  {"annotated_genes":["SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103541],"is_not":false,"summary":null,"term":"GO:0099117"}]},"cv_name":"biological_process","definition":"The movement of a protein along a microtubule to the cell-tip, mediated by motor proteins.","definition_xrefs":["PMID:15177031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"},{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"protein transport along microtubule to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099117","terms_by_termid":{"GO:0099117":null}}


id: GO:0021925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to Purkinje cells. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph","GOC:cls","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell precursor proliferation","termid":"GO:0021925"}


id: PBO:0003437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex theta subunit Cct8","termid":"PBO:0003437"}


id: PBO:0085592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud growth; involved in the transport of cell wall components from the Golgi to the cell surface; similar in structure and functionally redundant with Sbe2p; SBE22 has a paralog, SBE2, that arose from the whole genome duplication","termid":"PBO:0085592"}


id: PBO:0049368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 2B","termid":"PBO:0049368"}


id: GO:0018035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-arginine amide by hydrolysis and oxidation of an interior Arg-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0082"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-arginine amidation (obsolete GO:0018035)","termid":"GO:0018035"}


id: PBO:0056344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 3","termid":"PBO:0056344"}


id: PBO:0066321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBX1 pseudogene 1","termid":"PBO:0066321"}


id: FYPO:0003675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the large form of 5.8S rRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:8887563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased mature 5.8SL rRNA level","synonyms":[{"name":"increased 5.8SL rRNA level","type":"broad"},{"name":"increased mature 5.8S (L) rRNA level","type":"exact"},{"name":"increased mature 5.8SL rRNA accumulation","type":"related"},{"name":"increased mature 5.8SL rRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature 5.8SL rRNA level during vegetative growth","type":"exact"},{"name":"increased mature 5.8SL rRNA transcript level","type":"exact"}],"termid":"FYPO:0003675"}


id: PBO:0044647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopachrome tautomerase","termid":"PBO:0044647"}


id: GO:1990779
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane signaling receptor complex found exclusively on platelets. Involved in haemostasis and thrombosis where it aids blood coagulation.","definition_xrefs":["PMID:1730602","GOC:bhm","PMID:25297919","PMID:23336709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein complex","termid":"GO:0090665"},{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glycoprotein Ib-IX-V complex","synonyms":[{"name":"CD42","type":"exact"},{"name":"GPIb-IX-V complex","type":"exact"},{"name":"GPIb-V-IX complex","type":"exact"}],"termid":"GO:1990779"}


id: PBO:0061076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTPase KAP family P-loop domain containing 1","termid":"PBO:0061076"}


id: PBO:0068055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 360","termid":"PBO:0068055"}


id: GO:0033405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UCU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"UCU codon-amino acid adaptor activity","synonyms":[{"name":"TCT codon-amino acid adaptor activity","type":"exact"},{"name":"serine tRNA","type":"related"}],"termid":"GO:0033405"}


id: MONDO:0005712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nystagmus present at birth or caused by lesions sustained in utero or at the time of birth. It is usually pendular, and is associated with albinism and conditions characterized by early loss of central vision. Inheritance patterns may be X-linked, autosomal dominant, or recessive. (Adams et al., Principles of Neurology, 6th ed, p275)","definition_xrefs":["MESH:D020417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"pathologic nystagmus","termid":"MONDO:0004843"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital nystagmus","secondary_identifiers":["DOID:9649","icd11.foundation:1626567380","OMIMPS:310700","SCTID:64635004","EFO:0007217","ICD10CM:H55.01","MEDGEN:195995","Orphanet:651","HP:0000639","ICD9:379.51","UMLS:C0700501"],"synonyms":[{"name":"congenital idiopathic nystagmus","type":"exact"},{"name":"congenital pathologic nystagmus","type":"exact"},{"name":"motor congenital nystagmus","type":"exact"},{"name":"nystagmus","type":"broad"},{"name":"nystagmus, congenital","type":"exact"}],"termid":"MONDO:0005712","xrefs":{"Monarch":{"xref_id":"0005712"}}}


id: PBO:0036208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3_acetylation_during_vegetative_growth","termid":"PBO:0036208"}


id: GO:0016648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces disulfide.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors, disulfide as acceptor","secondary_identifiers":["EC:1.5.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH group of donors, disulphide as acceptor","type":"exact"}],"termid":"GO:0016648"}


id: PBO:0029172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_protein_in_growth_medium","termid":"PBO:0029172"}


id: GO:0050884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism voluntarily modulates its posture, the alignment of its anatomical parts.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular process","termid":"GO:0050905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular process controlling posture","synonyms":[{"name":"regulation of posture","type":"exact"}],"termid":"GO:0050884"}


id: PBO:0048184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABA type A receptor-associated protein","termid":"PBO:0048184"}


id: GO:0003772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Co-chaperonins are proteins that bind to chaperones and this complex then folds misfolded proteins. Co-chaperonins by themselves do not possess chaperone activity.","definition_xrefs":["GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete co-chaperonin activity (obsolete GO:0003772)","synonyms":[{"name":"co-chaperonin activity","type":"exact"}],"termid":"GO:0003772"}


id: GO:0034694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin stimulus.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prostaglandin","synonyms":[{"name":"response to prostaglandin stimulus","type":"exact"}],"termid":"GO:0034694"}


id: FYPO:0000523
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which peroxisomal transport does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peroxisomal transport","termid":"FYPO:0000522"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished peroxisomal transport","synonyms":[{"name":"abolished peroxisomal transport during mitotic cell cycle","type":"related"},{"name":"absent peroxisomal transport","type":"exact"},{"name":"peroxisomal transport abolished","type":"exact"},{"name":"peroxisomal transport abolished during vegetative growth","type":"exact"},{"name":"peroxisomal transport: absent","type":"related"}],"termid":"FYPO:0000523"}


id: PBO:0026820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_endosome","termid":"PBO:0026820"}


id: GO:0060915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell of the lung. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in lung development","termid":"GO:0060915"}


id: PBO:0090151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, coenzyme A, Leu5","termid":"PBO:0090151"}


id: PBO:0077029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-histidine guanylyltransferase 1 like","termid":"PBO:0077029"}


id: PBO:0059279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L37 pseudogene 1","termid":"PBO:0059279"}


id: PBO:0085138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for maturation of 18S rRNA; required for survival upon exposure to K1 killer toxin","termid":"PBO:0085138"}


id: GO:2000890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cellodextrin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"dextrin catabolic process","termid":"GO:1901027"},{"relation_name":"is_a","term_name":"cellodextrin metabolic process","termid":"GO:2000889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellodextrin catabolic process","synonyms":[{"name":"cellodextrin catabolism","type":"exact"}],"termid":"GO:2000890"}


id: MONDO:0019320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"linear verrucous nevus syndrome","termid":"MONDO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acanthokeratolytic verrucous nevus","secondary_identifiers":["Orphanet:79468","UMLS:C5681486","GARD:5485","MEDGEN:1826155"],"synonyms":[{"name":"verrucous nevus acanthokeratolytic","type":"related"}],"termid":"MONDO:0019320","xrefs":{"Monarch":{"xref_id":"0019320"}}}


id: PBO:0087443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit H of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; serves as an activator or a structural stabilizer of the V-ATPase; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087443"}


id: PBO:0057830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3148","termid":"PBO:0057830"}


id: GO:0048849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to neurohypophysis. This process pertains to the initial formation of a structure from unspecified parts. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neurohypophysis morphogenesis","termid":"GO:0048848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurohypophysis formation","synonyms":[{"name":"neurophysis biosynthesis","type":"exact"},{"name":"neurophysis formation","type":"exact"},{"name":"posterior pituitary biosynthesis","type":"exact"},{"name":"posterior pituitary formation","type":"exact"},{"name":"posterior pituitary gland biosynthesis","type":"exact"},{"name":"posterior pituitary gland formation","type":"exact"}],"termid":"GO:0048849"}


id: GO:0015493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: lysine(out) + H+(out) = lysine(in) + H+(in).","definition_xrefs":["TC:2.A.3.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:proton symporter activity","termid":"GO:0005280"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"lysine:proton symporter activity","synonyms":[{"name":"lysine:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015493"}


id: GO:0072084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the kidney nephron acquires its identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"distal tubule morphogenesis","termid":"GO:0072156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of distal tubule identity","termid":"GO:0072084"}


id: PBO:0080970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8B","termid":"PBO:0080970"}


id: GO:0008791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + L-arginine = CoA + N2-succinyl-L-arginine.","definition_xrefs":["EC:2.3.1.109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-succinyltransferase activity","termid":"GO:0016749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arginine N-succinyltransferase activity","secondary_identifiers":["MetaCyc:ARGININE-N-SUCCINYLTRANSFERASE-RXN","RHEA:15185"],"synonyms":[{"name":"AOST activity","type":"related"},{"name":"AST activity","type":"related"},{"name":"AstA","type":"related"},{"name":"arginine and ornithine N(2)-succinyltransferase activity","type":"related"},{"name":"arginine and ornithine N2-succinyltransferase activity","type":"related"},{"name":"arginine succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:L-arginine 2-N-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:L-arginine N2-succinyltransferase activity","type":"related"}],"termid":"GO:0008791"}


id: MONDO:0044329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta type XVIII (OI18) is characterized by congenital bowing of the long bones, wormian bones, blue sclerae, vertebral collapse, and multiple fractures in the first years of life ({1:Doyard et al., 2018}).","definition_xrefs":["OMIM:617952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta, type 18","secondary_identifiers":["UMLS:C4693736","DOID:0111848","MEDGEN:1635201"],"synonyms":[{"name":"OI18","type":"related"},{"name":"osteogenesis imperfecta, type XVIII","type":"related"}],"termid":"MONDO:0044329","xrefs":{"Monarch":{"xref_id":"0044329"}}}


id: GO:0002576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as histamine and serotonin by a platelet.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"platelet degranulation","secondary_identifiers":["Reactome:R-HSA-114608"],"synonyms":[{"name":"platelet exocytosis","type":"exact"}],"termid":"GO:0002576"}


id: PBO:0045116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublesex and mab-3 related transcription factor 3","termid":"PBO:0045116"}


id: GO:0015527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerol phosphate(out) + phosphate(in) = glycerol phosphate(in) + phosphate(out).","definition_xrefs":["TC:2.A.1.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"glycerol-phosphate:phosphate antiporter activity","synonyms":[{"name":"glycerol-phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0015527"}


id: PBO:0031846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0031846"}


id: PBO:0082097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"73 kDa subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; relocates to the cytosol under hypoxic conditions; deletion mutants are temperature-sensitive; SNF12 has a paralog, RSC6, that arose from the whole genome duplication","termid":"PBO:0082097"}


id: PBO:0072406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 11","termid":"PBO:0072406"}


id: PBO:0042168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCM2 scaffold protein","termid":"PBO:0042168"}


id: GO:0018571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxy-p-cumate + O2 = 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate.","definition_xrefs":["RHEA:42568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,3-dihydroxy-p-cumate dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0397","MetaCyc:RXN-666"],"synonyms":[{"name":"2,3-dihydroxy-p-cumate 3,4-dioxygenase","type":"exact"},{"name":"2,3-dihydroxy-p-cumate-3,4-dioxygenase","type":"exact"}],"termid":"GO:0018571"}


id: PBO:0004776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup120","termid":"PBO:0004776"}


id: GO:0098651
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any collagen timer that is part of a basement membrane.","definition_xrefs":["PMID:21421911","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete basement membrane collagen trimer (obsolete GO:0098651)","termid":"GO:0098651"}


id: PBO:0089502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain binding protein, transcription coregulator","termid":"PBO:0089502"}


id: PBO:0031420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_damage_checkpoint","termid":"PBO:0031420"}


id: FYPO:0002138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of an RNA catabolic process is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"},{"relation_name":"is_a","term_name":"increased RNA catabolic process","termid":"FYPO:0003553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"increased RNA catabolic process during vegetative growth","synonyms":[{"name":"increased RNA breakdown during vegetative growth","type":"exact"},{"name":"increased RNA catabolic process during mitotic cell cycle","type":"related"},{"name":"increased RNA catabolism during vegetative growth","type":"exact"},{"name":"increased RNA degradation during vegetative growth","type":"exact"}],"termid":"FYPO:0002138"}


id: GO:0031104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of dendrites in response to their loss or damage.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite development","termid":"GO:0016358"},{"relation_name":"is_a","term_name":"neuron projection regeneration","termid":"GO:0031102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite regeneration","termid":"GO:0031104"}


id: GO:0030430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytoplasm of a host cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular part","termid":"GO:0033646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell cytoplasm","secondary_identifiers":["GO:0097679"],"synonyms":[{"name":"other organism cytoplasm","type":"related"}],"termid":"GO:0030430"}


id: PBO:0017011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR36","termid":"PBO:0017011"}


id: GO:0046561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity similar to that of pepsin A, preferring hydrophobic residues at P1 and P1', but also cleaving Gly20-Glu in the B chain of insulin. Clots milk, and activates trypsinogen.","definition_xrefs":["EC:3.4.23.20"],"gene_count":0,"genotype_count":0,"name":"obsolete penicillopepsin activity (obsolete GO:0046561)","synonyms":[{"name":"Penicillium aspartic proteinase activity","type":"related"},{"name":"Penicillium caseicolum aspartic proteinase activity","type":"related"},{"name":"Penicillium citrinum acid proteinase activity","type":"related"},{"name":"Penicillium citrinum aspartic proteinase activity","type":"related"},{"name":"Penicillium cyclopium acid proteinase activity","type":"related"},{"name":"Penicillium duponti aspartic proteinase activity","type":"related"},{"name":"Penicillium expansum acid proteinase activity","type":"related"},{"name":"Penicillium expansum aspartic proteinase activity","type":"related"},{"name":"Penicillium janthinellum acid proteinase activity","type":"related"},{"name":"Penicillium janthinellum aspartic protease activity","type":"related"},{"name":"Penicillium janthinellum aspartic proteinase activity","type":"related"},{"name":"Penicillium roqueforti acid proteinase activity","type":"related"},{"name":"acid protease A","type":"exact"},{"name":"penicillopepsin activity","type":"exact"},{"name":"peptidase A activity","type":"broad"}],"termid":"GO:0046561"}


id: MONDO:0020444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Subaortic course of innominate vein is a rare congential anomaly of the great veins characterized by an anomalous course of the left brachiocephalic vein, passing from left to right below the aortic arch and entering the superior vena cava below the orifice of the azygos vein. Patients are frequently asymptomatic and diagnosed incidentally on imaging studies. Other cardiac malformations may be associated.","definition_xrefs":["Orphanet:99113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of superior vena cava","termid":"MONDO:0019829"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subaortic course of innominate vein","secondary_identifiers":["SCTID:766756002","GARD:19656","MEDGEN:1637333","UMLS:C4707821"],"synonyms":[{"name":"subaortic course of brachiocephalic vein","type":"exact"}],"termid":"MONDO:0020444","xrefs":{"Monarch":{"xref_id":"0020444"}}}


id: PBO:0049473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granzyme H","termid":"PBO:0049473"}


id: GO:0046816
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle used to transport the partial or complete virion between cellular compartments.","definition_xrefs":["GOC:vesicles","PMID:7933124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular vesicle","termid":"GO:0097708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virion transport vesicle","termid":"GO:0046816"}


id: PBO:0067706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 4","termid":"PBO:0067706"}


id: MONDO:0000665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Apraxia is a neurological disorder characterized by the inability to perform tasks or movements, despite having the desire and physical ability to perform them. It is caused by damage to the brain, especially the parietal lobe, and can arise from many diseases, tumors, a stroke, or traumatic brain injury. In some cases it is present from birth. There are several types of apraxia, which may occur alone or together. These include: Buccofacial or orofacial apraxia is the inability to carry out facial movements on demand. This may include licking the lips, sticking out the tongue, whistling, coughing, or winking. Ideational apraxia is the inability to carryout learned, complex tasks with multiple, sequential movements. This may include dressing, eating, and bathing. Ideomotor apraxia is the inability to perform a learned task (such as using a tool) or communicate using gestures (like waving good-bye). Limb-kinetic apraxia is the inability to make fine, precise movements with an arm or leg. This may include buttoning a shirt or tying a shoe. Verbal apraxia is difficulty coordinating mouth and speech movements. Verbal apraxia may be acquired or present from birth. Constructional apraxia is the inability to copy, draw, or construct simple figures. Oculomotor apraxia is difficulty moving the eyes on command. Treatment of apraxia may include physical, speech, or occupational therapy. If apraxia occurs as a symptom of another disorder, treatment should be directed to the underlying condition.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"agnosia","termid":"MONDO:0005638"},{"relation_name":"is_a","term_name":"perceptual disorders","termid":"MONDO:0024417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apraxia","secondary_identifiers":["ICD10CM:R48.2","icd11.foundation:986651951","DOID:0060135","MEDGEN:8166","MESH:D001072","UMLS:C0003635","NCIT:C180557"],"synonyms":[{"name":"Apraxias","type":"exact"},{"name":"dyspraxia","type":"exact"}],"termid":"MONDO:0000665","xrefs":{"Monarch":{"xref_id":"0000665"}}}


id: PBO:0016071
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe mPR1","termid":"PBO:0016071"}


id: MONDO:1010927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pseudomyotonia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pseudomyotonia, non-human animal","termid":"MONDO:1010201"},{"relation_name":"is_a","term_name":"myopathy, dog","termid":"MONDO:1010917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pseudomyotonia, dog","secondary_identifiers":["OMIA:001464-9615"],"termid":"MONDO:1010927","xrefs":{"Monarch":{"xref_id":"1010927"}}}


id: PBO:0012857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal 3'-5' exoribonuclease, PH-like Mtr3","termid":"PBO:0012857"}


id: GO:0006510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP-dependent proteolysis (obsolete GO:0006510)","synonyms":[{"name":"ATP-dependent peptidolysis","type":"exact"},{"name":"ATP-dependent proteolysis","type":"exact"}],"termid":"GO:0006510"}


id: GO:0015866
data:
  {"annotated_genes":["SJAG_02050","SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74389],"is_not":false,"summary":null,"term":"GO:0015866"},{"annotations":[58923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"}]},"cv_name":"biological_process","definition":"The directed movement of ADP, adenosine diphosphate, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"ADP transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0015866","terms_by_termid":{"GO:0015866":null,"GO:0140021":null}}


id: PBO:0031242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mRNA_splicing,_via_spliceosome","termid":"PBO:0031242"}


id: FYPO:0000455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites of double-strand breaks in DNA is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"increased number of double-strand break sites","termid":"FYPO:0003543"},{"relation_name":"is_a","term_name":"increased DNA damage during vegetative growth","termid":"FYPO:0003547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of double-strand break sites during vegetative growth","synonyms":[{"name":"accumulation of DNA damage foci during vegetative growth","type":"related"},{"name":"accumulation of double-strand break sites during vegetative growth","type":"exact"},{"name":"increased number of DNA damage foci during vegetative growth","type":"related"},{"name":"increased number of double-strand break sites during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000455"}


id: PBO:0053016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 4","termid":"PBO:0053016"}


id: GO:0050297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopa + O2 = 4-(L-alanin-3-yl)-2-hydroxy-cis,cis-muconate 6-semialdehyde + H+.","definition_xrefs":["RHEA:21220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"stizolobate synthase activity","secondary_identifiers":["MetaCyc:RXN-8460","EC:1.13.11.29"],"synonyms":[{"name":"3,4-dihydroxy-L-phenylalanine:oxygen 4,5-oxidoreductase (recyclizing)","type":"related"},{"name":"DOPA dioxygenase activity","type":"exact"}],"termid":"GO:0050297"}


id: PBO:0090402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prh1","termid":"PBO:0090402"}


id: PATO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being small or narrow in circumference or width in proportion to length or height.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/slender"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slender","synonyms":[{"name":"gracile","type":"related"}],"termid":"PATO:0002212"}


id: PBO:0065973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD54 homolog B","termid":"PBO:0065973"}


id: PBO:0056486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MATR3 pseudogene 3","termid":"PBO:0056486"}


id: MONDO:0003686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant sweat gland neoplasm with apocrine differentiation. Representative examples include apocrine adenoma, ceruminous adenocarcinoma, and apocrine breast carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sweat gland neoplasm","termid":"MONDO:0002381"},{"relation_name":"is_a","term_name":"apocrine sweat gland disorder","termid":"MONDO:0024467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"apocrine sweat gland neoplasm","secondary_identifiers":["UMLS:C1332318","DOID:5876","MEDGEN:272320","NCIT:C6798"],"synonyms":[{"name":"apocrine neoplasm","type":"exact"},{"name":"apocrine neoplasm of skin","type":"exact"},{"name":"apocrine neoplasm of the skin","type":"exact"},{"name":"apocrine skin neoplasm","type":"exact"},{"name":"apocrine skin tumor","type":"exact"},{"name":"apocrine skin tumour","type":"exact"},{"name":"apocrine sweat gland neoplasm (disease)","type":"exact"},{"name":"apocrine sweat gland tumor","type":"exact"},{"name":"apocrine sweat gland tumour","type":"exact"},{"name":"apocrine tumor","type":"exact"},{"name":"apocrine tumor of skin","type":"exact"},{"name":"apocrine tumor of the skin","type":"exact"},{"name":"apocrine tumour","type":"exact"},{"name":"apocrine tumour of skin","type":"exact"},{"name":"apocrine tumour of the skin","type":"exact"},{"name":"neoplasm of apocrine sweat gland","type":"exact"},{"name":"tumor of apocrine sweat gland","type":"exact"},{"name":"tumour of apocrine sweat gland","type":"exact"}],"termid":"MONDO:0003686","xrefs":{"Monarch":{"xref_id":"0003686"}}}


id: PBO:0074253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO1B3-SLCO1B7 readthrough","termid":"PBO:0074253"}


id: PBO:0063909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta","termid":"PBO:0063909"}


id: PBO:0077796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin 1A interacting protein 2","termid":"PBO:0077796"}


id: PBO:0076231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUPT20H like 2","termid":"PBO:0076231"}


id: GO:0102332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: malonyl-CoA + H+ + a long-chain acyl-[acp] + a reduced electron acceptor = 2 carbon dioxide + coenzyme A + a terminal olefin + a holo-[acyl-carrier protein] + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete fatty-acyl-[acp] elongase/decarboxylase activity (obsolete GO:0102332)","termid":"GO:0102332"}


id: PATO:0000656
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000656 time_quantity (obsolete PATO:0000656)","termid":"PATO:0000656"}


id: PBO:0077404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 139","termid":"PBO:0077404"}


id: PBO:0072504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 33","termid":"PBO:0072504"}


id: GO:0018777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alkyl halide + H2O = alcohol + HCl. Substrates are 1,3(R),4,6(R)-tetrachloro-1,4-cyclohexadiene (forms 2,4,5-trichloro-2,5-cyclohexadiene-1-ol) and 2,4,5-trichloro-2,5-cyclohexadiene-1-ol (forms 2,5-dichloro-2,5-cyclohexadiene-1,4-diol).","definition_xrefs":["PMID:10464214"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,3,4,6-tetrachloro-1,4-cyclohexadiene halidohydrolase activity (obsolete GO:0018777)","termid":"GO:0018777"}


id: PBO:0029143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_kinase_activity","termid":"PBO:0029143"}


id: PBO:0038661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrosomal vesicle protein 1","termid":"PBO:0038661"}


id: PBO:0076441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 13","termid":"PBO:0076441"}


id: MONDO:0030797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 93","secondary_identifiers":["MEDGEN:1810905","UMLS:C5676970","OMIM:619845"],"synonyms":[{"name":"RP93","type":"exact"},{"name":"retinitis pigmentosa 93","type":"exact"}],"termid":"MONDO:0030797","xrefs":{"Monarch":{"xref_id":"0030797"}}}


id: PBO:0080112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urotensin 2 receptor","termid":"PBO:0080112"}


id: MONDO:0024497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Used to describe tumor samples that exhibit poorly differentiated or undifferentiated cells. They are generally expected to be fast growing and aggressive.","definition_xrefs":["NCIT:C14158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general tumor grading characteristic","termid":"MONDO:0024489"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade 3 or 4, general grading system","synonyms":[{"name":"grade 3/4","type":"exact"},{"name":"high grade","type":"exact"}],"termid":"MONDO:0024497","xrefs":{"Monarch":{"xref_id":"0024497"}}}


id: PBO:0042805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide kinase","termid":"PBO:0042805"}


id: PBO:0049980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIKESHI pseudogene 1","termid":"PBO:0049980"}


id: PBO:0056139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper tumor suppressor 1","termid":"PBO:0056139"}


id: MONDO:0019836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital anomaly of hepatic vein","secondary_identifiers":["UMLS:C3163825","GARD:19282","MEDGEN:756237","Orphanet:95507"],"termid":"MONDO:0019836","xrefs":{"Monarch":{"xref_id":"0019836"}}}


id: GO:0042596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response of an organism to a perceived external threat.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal response to stress","termid":"GO:0033555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fear response","secondary_identifiers":["GO:0001663"],"synonyms":[{"name":"physiological fear response","type":"exact"}],"termid":"GO:0042596"}


id: GO:0035702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of monocytes such that the total number of monocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["CL:0000576","GOC:BHF","PMID:18832716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"},{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte homeostasis","termid":"GO:0035702"}


id: PBO:0040748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain cytoplasmic RNA 1, pseudogene 3","termid":"PBO:0040748"}


id: PBO:0066770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 68","termid":"PBO:0066770"}


id: PR:Q9HDY5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB1A10.05 gene.","definition_xrefs":["UniProtKB:Q9HDY5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB1A10.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.05","synonyms":[{"name":"Spom972h-SPAPB1A10.05","type":"exact"}],"termid":"PR:Q9HDY5"}


id: GO:0003920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: IMP + NADP+ + NH4 = GMP + 2 H+ + NADPH.","definition_xrefs":["RHEA:17185","EC:1.7.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"GMP reductase activity","secondary_identifiers":["Reactome:R-HSA-514604","MetaCyc:GMP-REDUCT-RXN","KEGG_REACTION:R01134"],"synonyms":[{"name":"NADPH2:guanosine-5'-phosphate oxidoreductase (deaminating)","type":"related"},{"name":"NADPH:GMP oxidoreductase (deaminating) activity","type":"related"},{"name":"NADPH:guanosine-5'-phosphate oxidoreductase (deaminating) activity","type":"related"},{"name":"guanosine 5'-monophosphate oxidoreductase activity","type":"related"},{"name":"guanosine 5'-monophosphate reductase activity","type":"related"},{"name":"guanosine 5'-phosphate reductase activity","type":"related"},{"name":"guanosine monophosphate reductase activity","type":"related"},{"name":"guanylate reductase activity","type":"related"},{"name":"inosine-5'-phosphate:NADP+ oxidoreductase (aminating)","type":"related"}],"termid":"GO:0003920"}


id: PBO:0030663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_leucine_import","termid":"PBO:0030663"}


id: GO:0071984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results an organism remaining in reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of diapause","termid":"GO:0071982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of reproductive diapause","termid":"GO:0071984"}


id: PBO:0088921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb5","termid":"PBO:0088921"}


id: FYPO:0003834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in the duration of meiotic interphase, which begins after cytokinesis and ends when meiotic prophase begins, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0051328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal duration of meiotic interphase","termid":"FYPO:0003834"}


id: PATO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000084 relative rhythym (obsolete PATO:0000084)","termid":"PATO:0000084"}


id: PBO:0058467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5196","termid":"PBO:0058467"}


id: PBO:0065245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 16","termid":"PBO:0065245"}


id: GO:0005596
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XIV) chains; type XIV collagen triple helices may link sheet-forming or fibrillar collagens to other structures.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XIV trimer","termid":"GO:0005596"}


id: GO:2001216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of hydroxymethylglutaryl-CoA reductase (NADPH) activity.","definition_xrefs":["GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity (obsolete GO:2001216)","synonyms":[{"name":"negative regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"related"},{"name":"negative regulation of HMG-CoA reductase activity","type":"related"}],"termid":"GO:2001216"}


id: MONDO:0006042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection of the membranes covering the brain and the spinal cord caused by Mycobacterium tuberculosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tuberculous salpingitis","termid":"MONDO:0000271"},{"relation_name":"is_a","term_name":"central nervous system tuberculosis","termid":"MONDO:0005696"},{"relation_name":"is_a","term_name":"bacterial meningitis","termid":"MONDO:0006670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meningeal tuberculosis","secondary_identifiers":["SCTID:58437007","UMLS:C0041318","MESH:D014390","Orphanet:499004","MEDGEN:21725","GARD:7828","NCIT:C84888","NORD:1437","EFO:1000039"],"synonyms":[{"name":"Meningitis, Tuberculous","type":"exact"},{"name":"TB meningitis","type":"exact"},{"name":"TBM","type":"exact"},{"name":"tubercular meningitis","type":"exact"},{"name":"tuberculous meningitis","type":"exact"}],"termid":"MONDO:0006042","xrefs":{"Monarch":{"xref_id":"0006042"}}}


id: FYPO:0004632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the second meiotic nuclear division is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiosis","termid":"FYPO:0003550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during meiosis II","synonyms":[{"name":"decreased protein accumulation during meiosis II","type":"related"},{"name":"decreased protein level during second meiotic nuclear division","type":"exact"},{"name":"reduced protein level during meiosis II","type":"exact"}],"termid":"FYPO:0004632"}


id: _global:started_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is strted_by Y if Y is part_of X and X and Y share a 5' boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"started_by","termid":"_global:started_by"}


id: PBO:0088382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multidomain vesicle coat component Sec16","termid":"PBO:0088382"}


id: PBO:0085085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear envelope/ER integral membrane protein; interacts and functions with Brr6p and Brl1p in lipid homeostasis; mutants are defective in nuclear pore complex biogenesis, nuclear envelope morphology, mRNA export from the nucleus and are sensitive to sterol biosynthesis inhibitors and membrane fluidizing agents; exhibits synthetic lethal genetic interactions with genes involved in lipid metabolism","termid":"PBO:0085085"}


id: PBO:0072575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase M2 polypeptide pseudogene 3","termid":"PBO:0072575"}


id: PBO:0028297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_old_growing_cell_tip","termid":"PBO:0028297"}


id: FYPO:0002993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased protein phosphorylation during cellular response to MMS","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to methyl methanesulphonate","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to MMS","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002993"}


id: GO:0045444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat.","definition_xrefs":["CL:0000136","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fat cell differentiation","synonyms":[{"name":"adipocyte cell differentiation","type":"exact"},{"name":"adipocyte differentiation","type":"exact"},{"name":"adipogenesis","type":"related"},{"name":"adipose cell differentiation","type":"exact"}],"termid":"GO:0045444"}


id: GO:0047164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biochanin-A + malonyl-CoA = 6'-malonyl-biochanin A + CoA.","definition_xrefs":["EC:2.3.1.115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-malonyltransferase activity","termid":"GO:0050736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"isoflavone-7-O-beta-glucoside 6''-O-malonyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4703","RHEA:15581"],"synonyms":[{"name":"MAT-7","type":"related"},{"name":"flavone (flavonol) 7-O-glycoside malonyltransferase activity","type":"related"},{"name":"flavone/flavonol 7-O-beta-D-glucoside malonyltransferase activity","type":"related"},{"name":"malonyl-CoA:flavone/flavonol 7-O-glucoside malonyltransferase activity","type":"related"},{"name":"malonyl-CoA:isoflavone-7-O-beta-D-glucoside 6''-O-malonyltransferase activity","type":"related"},{"name":"malonyl-coenzyme A:flavone/flavonol-7-O-glycoside malonyltransferase activity","type":"related"},{"name":"malonyl-coenzyme A:isoflavone 7-O-glucoside-6''-malonyltransferase activity","type":"related"}],"termid":"GO:0047164"}


id: GO:0047336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxy-5-methyl-5'-cytidylate + ATP = 5-methyldeoxycytidine diphosphate + ADP + H+.","definition_xrefs":["EC:2.7.4.19","RHEA:11396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"5-methyldeoxycytidine-5'-phosphate kinase activity","secondary_identifiers":["MetaCyc:2.7.4.19-RXN","KEGG_REACTION:R04235"],"synonyms":[{"name":"ATP:5-methyldeoxycytidine-5'-phosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047336"}


id: FYPO:0000016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"curved vegetative cell","synonyms":[{"name":"cell morphology, curved","type":"exact"},{"name":"comma-shaped cell","type":"exact"},{"name":"curved cell","type":"exact"},{"name":"curved cell during vegetative growth","type":"exact"},{"name":"curved vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000016"}


id: GO:0090444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and the rate at which this time point is reached.","definition_xrefs":["PMID:17550772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode larval development, heterochronic","termid":"GO:0090444"}


id: PBO:0061495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nurim","termid":"PBO:0061495"}


id: PBO:0018226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, glycerophospholipid-transfer protein Sec14","termid":"PBO:0018226"}


id: GO:0052190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host phagocytosis (obsolete GO:0052190)","termid":"GO:0052190"}


id: GO:0061424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter and activates or increases the frequency, rate or extent of peroxisome organization.","definition_xrefs":["GOC:dph","PMID:7500953"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0061424)","synonyms":[{"name":"positive regulation of peroxisome organisation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0061424"}


id: PBO:0072664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4 interacting protein 1","termid":"PBO:0072664"}


id: GO:0016215
data:
  {"annotated_genes":["SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004768"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + O2 + octadecanoyl-CoA = (9Z)-octadecenoyl-CoA + A + 2 H2O.","definition_xrefs":["RHEA:25416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"acyl-CoA desaturase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"CoA desaturase activity","type":"broad"}],"termid":"GO:0016215","terms_by_termid":{"GO:0004768":null}}


id: PBO:0056631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 11","termid":"PBO:0056631"}


id: MONDO:0013264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the OPTN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 12","secondary_identifiers":["MEDGEN:462042","DOID:0060203","OMIM:613435","UMLS:C3150692","GARD:15663"],"synonyms":[{"name":"ALS12","type":"exact"},{"name":"OPTN amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 12","type":"exact"},{"name":"amyotrophic lateral sclerosis 12 with or without frontotemporal dementia","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in OPTN","type":"exact"},{"name":"amyotrophic lateral sclerosis type 12","type":"exact"}],"termid":"MONDO:0013264","xrefs":{"Monarch":{"xref_id":"0013264"}}}


id: GO:0098914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the atrial cardiomyocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"is_a","term_name":"atrial cardiac muscle cell membrane repolarization","termid":"GO:0099624"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane repolarization during atrial cardiac muscle cell action potential","synonyms":[{"name":"atrial repolarization","type":"related"},{"name":"electrocardiogram QRS complex","type":"related"}],"termid":"GO:0098914"}


id: MONDO:0001979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of the gastrointestinal tract. It is typically caused by the rapid emptying of undigested food from the stomach to the small intestine following gastroesophageal surgery but may be seen secondary to diabetes or the use of certain medications. Clinical signs may be seen 30-60 minutes after eating (early dumping): cramping, nausea, vomiting and diarrhea or they may be seen 1-3 hours later as a result of hyperinsulinemic hypoglycemia (late dumping): sweating, dizziness, confusion and heart palpitations. Untreated, the clinical course progresses to malnutrition and weight loss.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"postgastrectomy syndrome","termid":"MONDO:0004566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"dumping syndrome","secondary_identifiers":["EFO:1001307","icd11.foundation:237191235","DOID:14495","NCIT:C2994","MEDGEN:8501","MESH:D004377","UMLS:C0013288"],"synonyms":[{"name":"dumping (jejunal) syndrome","type":"exact"},{"name":"jejunal syndrome","type":"exact"}],"termid":"MONDO:0001979","xrefs":{"Monarch":{"xref_id":"0001979"}}}


id: PR:G2TRM7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam5 gene.","definition_xrefs":["UniProtKB:G2TRM7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.18c","synonyms":[{"name":"Spom972h-tam5","type":"exact"},{"name":"transcripts altered in meiosis protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRM7"}


id: FYPO:0001486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to salt stress is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during cellular response to osmotic stress","termid":"FYPO:0003793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during cellular response to salt stress","synonyms":[{"name":"normal RNA accumulation during cellular response to salt stress","type":"related"},{"name":"normal RNA level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to salt stress","type":"narrow"},{"name":"normal transcript level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001486"}


id: MONDO:0000068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucolipidosis (obsolete MONDO:0000068)","termid":"MONDO:0000068","xrefs":{"Monarch":{"xref_id":"0000068"}}}


id: PBO:0069927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1219, pseudogene","termid":"PBO:0069927"}


id: MONDO:0021010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm of the skin arising from the lymphatic vessels.","definition_xrefs":["NCIT:C4490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangiosarcoma","termid":"MONDO:0006282"},{"relation_name":"is_a","term_name":"skin sarcoma","termid":"MONDO:0006414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin lymphangiosarcoma","secondary_identifiers":["MEDGEN:87536","ICD9:171.2","UMLS:C0346082","SCTID:62497000"],"synonyms":[{"name":"lymphangiosarcoma of Stewart and Treves","type":"exact"},{"name":"lymphangiosarcoma of skin","type":"exact"},{"name":"lymphangiosarcoma of the skin","type":"exact"},{"name":"skin lymphangiosarcoma","type":"exact"}],"termid":"MONDO:0021010","xrefs":{"Monarch":{"xref_id":"0021010"}}}


id: GO:2000345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatocyte proliferation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"hepatocyte proliferation","termid":"GO:0072574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatocyte proliferation","termid":"GO:2000345"}


id: MOD:01849
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues by a thioether bond to form S-(2-aminovinyl)-D-cysteine.","definition_xrefs":["PubMed:20805503","RESID:AA0204#CYS2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-D-cysteine","termid":"MOD:01850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(2-aminovinyl)-D-cysteine (Cys-Cys)","synonyms":[{"name":"(2S)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(S,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"CROSSLNK S-(2-aminovinyl)-D-cysteine (Cys-Cys)","type":"exact"},{"name":"S-(2-aminovinyl)-D-cysteine","type":"exact"}],"termid":"MOD:01849"}


id: GO:1904540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycolytic process through fructose-6-phosphate.","definition_xrefs":["GOC:dph","ISBN:0201090910","GO_REF:0000058","GOC:TermGenie","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycolytic process","termid":"GO:0045821"},{"relation_name":"is_a","term_name":"regulation of glycolytic process through fructose-6-phosphate","termid":"GO:1904538"},{"relation_name":"positively_regulates","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0055086","GO:0005975","GO:0044281","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of glycolytic process through fructose-6-phosphate","synonyms":[{"name":"activation of glycolysis through fructose-6-phosphate","type":"narrow"},{"name":"activation of glycolytic process through fructose-6-phosphate","type":"narrow"},{"name":"positive regulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"up regulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"up regulation of glycolytic process through fructose-6-phosphate","type":"exact"},{"name":"up-regulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"up-regulation of glycolytic process through fructose-6-phosphate","type":"exact"},{"name":"upregulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"upregulation of glycolytic process through fructose-6-phosphate","type":"exact"}],"termid":"GO:1904540"}


id: PBO:0084131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexose transporter; capable of transporting a broad range of substrates including: glucose, fructose, mannose and galactose; polyol transporter that supports the growth on and uptake of xylitol with low affinity when overexpressed in a strain deleted for hexose family members; nearly identical in sequence to Hxt9p; has similarity to major facilitator superfamily (MFS) transporters; involved in pleiotropic drug resistance","termid":"PBO:0084131"}


id: FYPO:0003357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to filipin. Cells stop growing (and may die) at a concentration of filipin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to filipin","synonyms":[{"name":"hypersensitive to filipin","type":"exact"},{"name":"sensitive to filipin during mitotic cell cycle","type":"related"},{"name":"sensitive to filipin during vegetative growth","type":"exact"},{"name":"sensitivity to chemicals interfering with lipids","type":"broad"}],"termid":"FYPO:0003357"}


id: GO:0035261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the external genitalia are generated and organized. The external genitalia are the outer sex organs, such as the penis or vulva in mammals.","definition_xrefs":["PMID:25247640","PMID:24793987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"external genitalia morphogenesis","termid":"GO:0035261"}


id: GO:0044078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont organism activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport, in its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host receptor-mediated endocytosis (obsolete GO:0044078)","synonyms":[{"name":"positive regulation of host receptor-mediated endocytosis by symbiont","type":"exact"}],"termid":"GO:0044078"}


id: MONDO:0002544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A oligodendroglioma that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain glioma","termid":"MONDO:0005499"},{"relation_name":"is_a","term_name":"oligodendroglioma","termid":"MONDO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain oligodendroglioma","secondary_identifiers":["MEDGEN:91095","UMLS:C0346286","NCIT:C9377","SCTID:254940005","DOID:3187"],"synonyms":[{"name":"brain oligodendroglioma","type":"exact"},{"name":"oligodendroglioma of brain","type":"exact"},{"name":"oligodendroglioma of the brain","type":"exact"}],"termid":"MONDO:0002544","xrefs":{"Monarch":{"xref_id":"0002544"}}}


id: GO:0090681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor activity that is responsible for the sense of taste.","definition_xrefs":["GOC:hat","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"taste receptor activity","termid":"GO:0008527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"GPCR taste receptor activity","synonyms":[{"name":"G-protein coupled taste receptor activity","type":"exact"},{"name":"G-protein-coupled taste receptor activity","type":"exact"}],"termid":"GO:0090681"}


id: PBO:0048825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 10 pseudogene 1","termid":"PBO:0048825"}


id: GO:0071015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the cooperative binding of the heterodimeric U11/U12 snRNP to the 5' splice site and the branch point sequence. The U12-type prespliceosome includes many proteins in addition to those found in the U11/U12 heterodimeric snRNPs. Commitment to a given pair of 5' and 3' splice sites occurs at the time of prespliceosome formation.","definition_xrefs":["GOC:ab","GOC:mah","PMID:10197985","PMID:16201866","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U12-type spliceosomal complex","termid":"GO:0005689"},{"relation_name":"is_a","term_name":"prespliceosome","termid":"GO:0071010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U12-type prespliceosome","synonyms":[{"name":"AT-AC prespliceosome","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex A","type":"narrow"},{"name":"minor prespliceosome","type":"exact"},{"name":"yeast U12-type spliceosomal complex B","type":"narrow"}],"termid":"GO:0071015"}


id: GO:0046326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of D-glucose transmembrane transport","termid":"GO:0010828"},{"relation_name":"is_a","term_name":"regulation of D-glucose import","termid":"GO:0046324"},{"relation_name":"positively_regulates","term_name":"D-glucose import","termid":"GO:0046323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of D-glucose import","synonyms":[{"name":"activation of glucose import","type":"narrow"},{"name":"positive regulation of glucose import","type":"exact"},{"name":"positive regulation of glucose uptake","type":"exact"},{"name":"stimulation of glucose import","type":"narrow"},{"name":"up regulation of glucose import","type":"exact"},{"name":"up-regulation of glucose import","type":"exact"},{"name":"upregulation of glucose import","type":"exact"}],"termid":"GO:0046326"}


id: PBO:0001399
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.16.1.18","termid":"PBO:0001399"}


id: GO:0044527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a peptidyl-cystine residue in a protein by the direct addition of H2S, followed by the removal of 2 protons to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jsg","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete formation of peptidyl-cystine persulfide by sulphur transfer from H2S (obsolete GO:0044527)","termid":"GO:0044527"}


id: FYPO:0000106
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119030],"is_not":false,"summary":null,"term":"FYPO:0000106"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hygromycin B. Cells stop growing (and may die) at a concentration of hygromycin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to hygromycin B","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"hypersensitive to hygromycin B","type":"exact"},{"name":"sensitive to hygromycin B during mitotic cell cycle","type":"related"},{"name":"sensitive to hygromycin B during vegetative growth","type":"exact"}],"termid":"FYPO:0000106","terms_by_termid":{"FYECO:0000126":null,"FYECO:0000137":null,"FYPO:0000106":null,"FYPO_EXT:0000002":null}}


id: PBO:0036449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon-exon junction complex disassembly factor Mni1 (predicted)","termid":"PBO:0036449"}


id: PBO:0054672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2078","termid":"PBO:0054672"}


id: PBO:0058713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6841","termid":"PBO:0058713"}


id: PBO:0041282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1QTNF7 antisense RNA 1","termid":"PBO:0041282"}


id: GO:0003167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell of the atrioventricular bundle. These cells are specialized cardiomyocytes that transmit signals from the AV node to the cardiac Purkinje fibers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"His-Purkinje system cell differentiation","termid":"GO:0060932"},{"relation_name":"part_of","term_name":"bundle of His development","termid":"GO:0003166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular bundle cell differentiation","synonyms":[{"name":"AV bundle cell differentiation","type":"exact"}],"termid":"GO:0003167"}


id: GO:0097308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a farnesol stimulus.","definition_xrefs":["GOC:di","PMID:11425711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"response to farnesol","termid":"GO:0097307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to farnesol","termid":"GO:0097308"}


id: PBO:0109171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYLD antisense RNA 2","termid":"PBO:0109171"}


id: PR:O13878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 75 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02060","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.13","secondary_identifiers":["UniProtKB:O13878"],"synonyms":[{"name":"Spom972h-WDR75","type":"exact"},{"name":"U3 protein 17 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13878"}


id: PBO:0065639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 14","termid":"PBO:0065639"}


id: SOFP:Gap
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A GFF3 Gap cigar string","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gap","termid":"SOFP:Gap"}


id: PBO:0017598
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mei2 Interacting Protein","termid":"PBO:0017598"}


id: MONDO:0000865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital fiber-type disproportion (obsolete MONDO:0000865)","termid":"MONDO:0000865","xrefs":{"Monarch":{"xref_id":"0000865"}}}


id: PBO:0002804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type I protein arginine N-methyltransferase Rmt1","termid":"PBO:0002804"}


id: PBO:0030407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-Glc2Man9GlcNAc_absent_from_cell","termid":"PBO:0030407"}


id: FYECO:0000075
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which NADP+ was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NADP+","termid":"FYECO:0000075"}


id: MONDO:0013956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic variant of Mendelian susceptibility to mycobacterial diseases characterized by a partial defect in the interferon (IFN)-gamma pathway, leading to mild mycobacterial infections.","definition_xrefs":["Orphanet:319595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mendelian susceptibility to mycobacterial diseases due to partial STAT1 deficiency","secondary_identifiers":["DOID:0111945","MEDGEN:862387","UMLS:C4013950","OMIM:614892"],"synonyms":[{"name":"IMD31A","type":"related"},{"name":"MSMD due to partial STAT1 deficiency","type":"exact"},{"name":"MSMD due to partial signal transducer and activator of transcription 1 deficiency","type":"exact"},{"name":"Mendelian susceptibility to mycobacterial diseases due to partial signal transducer and activator of transcription 1 deficiency","type":"exact"},{"name":"STAT1 autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"Stat1 deficiency, autosomal dominant","type":"related"},{"name":"autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in STAT1","type":"exact"},{"name":"immunodeficiency 31A","type":"related"},{"name":"immunodeficiency 31A, Mycobacteriosis, autosomal dominant","type":"related"},{"name":"immunodeficiency type 31A","type":"exact"}],"termid":"MONDO:0013956","xrefs":{"Monarch":{"xref_id":"0013956"}}}


id: GO:0035271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the ring gland over time, from its formation to a mature structure. The ring gland is a neuroendocrine organ found in higher Dipterans, which is composed of the prothoracic gland, the corpus allatum, and the corpora cardiacum. The ring gland is the site of production and release of ecdysteroids and juvenile hormones.","definition_xrefs":["GOC:bf","PMID:11223816","PMID:9584098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ring gland development","termid":"GO:0035271"}


id: FYPO:0006363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle forms with microtubules emanating from only one pole during the first meiotic nuclear division.","definition_xrefs":["PMID:24954111","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology during meiosis I","termid":"FYPO:0005652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0001985","FYPO:0000120","FYPO:0000002"],"is_obsolete":false,"name":"monopolar spindle during meiosis I","synonyms":[{"name":"V-shaped spindle during meiosis I","type":"related"},{"name":"fan-shaped spindle during meiosis I","type":"exact"},{"name":"monopolar spindle during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006363"}


id: PBO:0003811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc7/UbcP3","termid":"PBO:0003811"}


id: GO:0003028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by the action of chemoreceptors found in the aortic bodies and their resultant modulation of the vasomotor center. Chemoreceptors respond to oxygen, carbon dioxide and hydrogen ions.","definition_xrefs":["GOC:mtg_cardio","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by chemoreceptor signaling","termid":"GO:0001979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by aortic body chemoreceptor signaling","synonyms":[{"name":"aortic body chemoreceptor regulation of systemic arterial blood pressure","type":"exact"},{"name":"aortic body chemoreceptor response to lowering of systemic arterial blood pressure","type":"exact"},{"name":"regulation of systemic arterial blood pressure by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003028"}


id: MONDO:0008383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, systemic autoimmune disorder characterized by inflammation in the synovial membranes and articular surfaces. It manifests primarily as a symmetric, erosive polyarthritis that spares the axial skeleton and is typically associated with the presence in the serum of rheumatoid factor.","definition_xrefs":["NCIT:C2884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of musculoskeletal system","termid":"MONDO:0000589"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"rheumatoid arthritis","secondary_identifiers":["Orphanet:284130","MEDGEN:2078","UMLS:C0003873","EFO:0000685","DOID:7148","HP:0001370","icd11.foundation:576319925","MESH:D001172","SCTID:69896004","ICD9:714.0","OMIM:180300"],"synonyms":[{"name":"RA","type":"exact"},{"name":"arthritis or polyarthritis, rheumatic","type":"exact"},{"name":"arthritis, rheumatoid","type":"exact"},{"name":"atrophic arthritis","type":"broad"},{"name":"autoimmune arthritis","type":"exact"},{"name":"rheumatoid arthritis","type":"exact"},{"name":"rheumatoid arthritis, progression of","type":"exact"},{"name":"rheumatoid arthritis, susceptibility to","type":"related"}],"termid":"MONDO:0008383","xrefs":{"Monarch":{"xref_id":"0008383"}}}


id: PBO:0034105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_synology_relationship_with","termid":"PBO:0034105"}


id: GO:0015961
data:
  {"annotated_genes":["SJAG_04169","SJAG_04870","SJAG_04939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901909"},{"annotations":[78997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"},{"annotations":[111243,116883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015964"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diadenosine polyphosphate, a derivative of the nucleoside adenosine with phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04169":null,"SJAG_04870":null,"SJAG_04939":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"diadenosine polyphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine polyphosphate breakdown","type":"exact"},{"name":"diadenosine polyphosphate catabolism","type":"exact"},{"name":"diadenosine polyphosphate degradation","type":"exact"}],"termid":"GO:0015961","terms_by_termid":{"GO:0015964":null,"GO:1901907":null,"GO:1901909":null}}


id: PR:O60145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.15","secondary_identifiers":["UniProtKB:O60145"],"synonyms":[{"name":"Spom972h-CDK10","type":"exact"}],"termid":"PR:O60145"}


id: PBO:0073464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFTPD antisense RNA 1","termid":"PBO:0073464"}


id: GO:0018926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methanesulfonic acid, a strong acid produced by the oxidation of dimethyl sulfide.","definition_xrefs":["UM-BBD_pathwayID:msa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"methanesulfonic acid metabolic process","synonyms":[{"name":"methanesulfonic acid metabolism","type":"exact"},{"name":"methanesulphonic acid metabolic process","type":"exact"},{"name":"methanesulphonic acid metabolism","type":"exact"}],"termid":"GO:0018926"}


id: PBO:0044187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTR9 homolog, Paf1/RNA polymerase II complex component","termid":"PBO:0044187"}


id: PBO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease Dhp1","termid":"PBO:0002013"}


id: GO:0002613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of monocyte antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"monocyte antigen processing and presentation","termid":"GO:0002471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monocyte antigen processing and presentation","termid":"GO:0002613"}


id: PBO:0069444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 709, pseudogene","termid":"PBO:0069444"}


id: GO:0030427
data:
  {"annotated_genes":["SJAG_01171","SJAG_01732","SJAG_01196","SJAG_00030","SJAG_02166","SJAG_04624","SJAG_00152","SJAG_01794","SJAG_02511","SJAG_00279","SJAG_04960","SJAG_04666","SJAG_01017","SJAG_03637","SJAG_02351","SJAG_00661","SJAG_00424","SJAG_03486","SJAG_04100","SJAG_02486","SJAG_02320","SJAG_03748","SJAG_02718","SJAG_04781","SJAG_01888","SJAG_03646","SJAG_03011","SJAG_03357","SJAG_02924","SJAG_03915","SJAG_02222","SJAG_04566","SJAG_03453","SJAG_02278","SJAG_04887","SJAG_04703","SJAG_03705","SJAG_04509","SJAG_03625","SJAG_02338","SJAG_04901","SJAG_02228","SJAG_00870","SJAG_02104","SJAG_03581","SJAG_01288","SJAG_05285","SJAG_01215","SJAG_02838","SJAG_02916","SJAG_00185","SJAG_04058","SJAG_03145","SJAG_00667","SJAG_01754","SJAG_01290","SJAG_02169","SJAG_01943","SJAG_03119","SJAG_01993","SJAG_03126","SJAG_04765","SJAG_00938","SJAG_04358","SJAG_05001","SJAG_00677","SJAG_04001","SJAG_04522","SJAG_03596","SJAG_01114","SJAG_01189","SJAG_04723","SJAG_02700","SJAG_00514","SJAG_00700","SJAG_01388","SJAG_04982","SJAG_03444","SJAG_02566","SJAG_01925","SJAG_02392","SJAG_04050"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70576,70767,76552,91388,95638,118668],"is_not":false,"summary":null,"term":"GO:0030427"},{"annotations":[113939,110544,118621,112833,90504,116267,118423,117694,92203,87667,94362,90533,111735,105895,115959,69984,89640,115598],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902716"},{"annotations":[118977,88252,118975,118979,94728,118981,103665,99561,75328,118971,93670,111956,116352,99972,95204,118973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035838"},{"annotations":[118980,118974,118982,118976,118972,118978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001411"},{"annotations":[90634,107860,92305,111107,93813,99947,99352,95156,101738,119372,88879,88063,115964,114413,101739,107921,93617],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[115605,78397,73737,76241,103043,105901,90464,92379,106657,96659,98694,106956,108641,108850,114107,75335,77676,90509,97516,97712,69963,87676,71841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043332"},{"annotations":[109988,96160],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070867"},{"annotations":[89219,99123,115607,96663,110551,112566,114164,91377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035841"},{"annotations":[110553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035842"},{"annotations":[99124,102857,113833,89221,88549,104446,112568,91378,114165,96664,105902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035840"},{"annotations":[77867],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902929"}]},"cv_name":"cellular_component","definition":"Any part of a cell where non-isotropic growth takes place.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical 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of polarized growth","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:30726171":null,"PMID:36148799":null},"secondary_identifiers":["GO:0000134","GO:0030483"],"termid":"GO:0030427","terms_by_termid":{"GO:0001411":null,"GO:0030427":null,"GO:0035838":null,"GO:0035840":null,"GO:0035841":null,"GO:0035842":null,"GO:0043332":null,"GO:0070867":null,"GO:1902716":null,"GO:1902929":null,"GO:1990819":null}}


id: PBO:0043278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member A","termid":"PBO:0043278"}


id: PBO:0088335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L22","termid":"PBO:0088335"}


id: PBO:0061414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide W","termid":"PBO:0061414"}


id: MONDO:0009484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAI1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 1","secondary_identifiers":["Orphanet:98861","DOID:0110594","OMIM:244400","UMLS:C4551906","MEDGEN:1646059","NCIT:C128117"],"synonyms":[{"name":"CILD1","type":"exact"},{"name":"DNAI1 primary ciliary dyskinesia","type":"exact"},{"name":"Kartagener syndrome","type":"related"},{"name":"PCD","type":"related"},{"name":"Polynesian bronchiectasis","type":"related"},{"name":"Siewert syndrome","type":"related"},{"name":"ciliary dyskinesia, primary, 1","type":"related"},{"name":"ciliary dyskinesia, primary, 1, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 1","type":"exact"},{"name":"dextrocardia, bronchiectasis, and sinusitis","type":"related"},{"name":"immotile cilia syndrome","type":"related"},{"name":"primary ciliary dyskinesia 1","type":"exact"},{"name":"primary ciliary dyskinesia 1 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAI1","type":"exact"},{"name":"primary ciliary dyskinesia type 1","type":"exact"}],"termid":"MONDO:0009484","xrefs":{"Monarch":{"xref_id":"0009484"}}}


id: GO:0044538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a cell encompassing the cell cortex, the plasma membrane, and any external encapsulating structures of a host cell.","definition_xrefs":["GOC:jl","PMID:20463076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell periphery","termid":"GO:0044538"}


id: MONDO:0018838
data:
  {"annotated_genes":["SJAG_04938","SJAG_03145","SJAG_01825","SJAG_02791","SJAG_02313","SJAG_04387","SJAG_02509"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013812"},{"annotations":[85063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014596"},{"annotations":[84959,84960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012703"},{"annotations":[85279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[86676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"},{"annotations":[85439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014296"}]},"cv_name":"mondo","definition":"The term lissencephaly covers a group of rare malformations sharing the common feature of anomalies in the appearance of brain convolutions (characterized by simplification or absence of folding) associated with abnormal organization of the cortical layers as a result of neuronal migration defects during embryogenesis.","definition_xrefs":["Orphanet:48471"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01825":null,"SJAG_02313":null,"SJAG_02509":null,"SJAG_02791":null,"SJAG_03145":null,"SJAG_04387":null,"SJAG_04938":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly spectrum disorders","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0266463","MedDRA:10048911","MEDGEN:78604","NANDO:1200574","NANDO:2200817","MESH:D054082","NORD:1374","GARD:12291","HP:0001339","NCIT:C103921","OMIMPS:607432","DOID:0050453","SCTID:204036008"],"synonyms":[{"name":"Broad gyri of cerebrum","type":"related"},{"name":"Lissencephaly","type":"exact"},{"name":"large gyri of cerebrum","type":"related"},{"name":"lissencephaly","type":"exact"},{"name":"lissencephaly (disease)","type":"exact"},{"name":"lissencephaly spectrum disorders","type":"exact"},{"name":"macrogyria","type":"related"},{"name":"pachygyria","type":"related"}],"termid":"MONDO:0018838","terms_by_termid":{"MONDO:0009736":null,"MONDO:0012703":null,"MONDO:0013812":null,"MONDO:0014296":null,"MONDO:0014466":null,"MONDO:0014596":null},"xrefs":{"Monarch":{"xref_id":"0018838"}}}


id: GO:2000859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aldosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mineralocorticoid secretion","termid":"GO:2000856"},{"relation_name":"is_a","term_name":"regulation of aldosterone secretion","termid":"GO:2000858"},{"relation_name":"negatively_regulates","term_name":"aldosterone secretion","termid":"GO:0035932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of aldosterone secretion","termid":"GO:2000859"}


id: GO:1900631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tridecane.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tridecane metabolic process","synonyms":[{"name":"tridecane metabolism","type":"exact"}],"termid":"GO:1900631"}


id: MONDO:0009371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3 hydroxyisobutyric aciduria is characterized by ketoacidotic episodes, cerebral anomalies and facial dysmorphism. It is an organic aciduria that involves valine metabolism. Thirteen cases have been described in the literature so far. Transmission is thought to be autosomal recessive.","definition_xrefs":["Orphanet:939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of branched-chain amino acid metabolism","termid":"MONDO:0019242"},{"relation_name":"is_a","term_name":"valine metabolism disease","termid":"MONDO:0037870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-hydroxyisobutyric aciduria","secondary_identifiers":["OMIM:236795","ICD9:791.9","UMLS:C0342737","icd11.foundation:1293648631","MEDGEN:90996","MESH:C535312","GARD:5662","SCTID:237957007"],"synonyms":[{"name":"3-hydroxyisobutyric aciduria","type":"exact"},{"name":"disorder of valine metabolism","type":"related"}],"termid":"MONDO:0009371","xrefs":{"Monarch":{"xref_id":"0009371"}}}


id: PBO:0075949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 4 (pseudogene)","termid":"PBO:0075949"}


id: PBO:0076150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUFU negative regulator of hedgehog signaling","termid":"PBO:0076150"}


id: PBO:0057613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1179","termid":"PBO:0057613"}


id: PR:Q9Y7S5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C569.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.06","synonyms":[{"name":"Spom972h-SPCC569.06","type":"exact"}],"termid":"PR:Q9Y7S5"}


id: MONDO:1010461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in Arabian camel.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, Arabian camel","secondary_identifiers":["OMIA:000515-9838"],"termid":"MONDO:1010461","xrefs":{"Monarch":{"xref_id":"1010461"}}}


id: PBO:0051794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCJ-SCHIP1 readthrough","termid":"PBO:0051794"}


id: MONDO:0024652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube disorder","termid":"MONDO:0002156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic cyst of fallopian tube","secondary_identifiers":["icd11.foundation:440178290","ICD10CM:Q50.4","MEDGEN:609068","SCTID:302954008","UMLS:C0431631"],"synonyms":[{"name":"cyst of mesenteric remnant","type":"related"},{"name":"embryonic cyst of fallopian tube","type":"exact"}],"termid":"MONDO:0024652","xrefs":{"Monarch":{"xref_id":"0024652"}}}


id: PBO:0091088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane insertase Cox18","termid":"PBO:0091088"}


id: PBO:0050475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A3","termid":"PBO:0050475"}


id: GO:0006067
data:
  {"annotated_genes":["SJAG_05006","SJAG_00240","SJAG_01414","SJAG_03370","SJAG_03822","SJAG_03743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88294,98529,114406,114407,98528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[96371],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethanol, CH3-CH2-OH, a colorless, water-miscible, flammable liquid produced by alcoholic fermentation.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ethanol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ethanol metabolism","type":"exact"}],"termid":"GO:0006067","terms_by_termid":{"GO:0019655":null,"GO:2001172":null}}


id: PBO:0028837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_homologous_chromosome_pairing","termid":"PBO:0028837"}


id: PBO:0046827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5","termid":"PBO:0046827"}


id: MONDO:0009573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaepiphyseal dwarfism","secondary_identifiers":["UMLS:C1855310","MEDGEN:383654","OMIM:249230","MESH:C536140"],"synonyms":[{"name":"megaepiphyseal dwarfism","type":"exact"}],"termid":"MONDO:0009573","xrefs":{"Monarch":{"xref_id":"0009573"}}}


id: PATO:0001690
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A contractility quality inhering in a bearer by virtue of the bearer's ability of contracting or being contracted.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractility","termid":"PATO:0001579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractile","termid":"PATO:0001690"}


id: MONDO:1010589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"},{"relation_name":"is_a","term_name":"congenital hypothyroidism, goat","termid":"MONDO:1010605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, goat","secondary_identifiers":["OMIA:000424-9925"],"termid":"MONDO:1010589","xrefs":{"Monarch":{"xref_id":"1010589"}}}


id: FYPO:0003627
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"},{"relation_name":"is_a","term_name":"protein localization phenotype","termid":"FYPO:0002333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01143":null},"genotype_count":1,"genotypes_by_uniquename":{"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal cellular protein localisation","type":"exact"},{"name":"normal cellular protein localization","type":"exact"},{"name":"normal protein localisation","type":"exact"}],"termid":"FYPO:0003627","terms_by_termid":{"FYECO:0000137":null,"FYPO:0000644":null}}


id: GO:0070240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of activated T cell autonomous cell death.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activated T cell autonomous cell death","termid":"GO:0070239"},{"relation_name":"negatively_regulates","term_name":"activated T cell autonomous cell death","termid":"GO:0070238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activated T cell autonomous cell death","synonyms":[{"name":"down regulation of activated T cell autonomous cell death","type":"exact"},{"name":"down-regulation of activated T cell autonomous cell death","type":"exact"},{"name":"downregulation of activated T cell autonomous cell death","type":"exact"},{"name":"inhibition of activated T cell autonomous cell death","type":"narrow"},{"name":"negative regulation of ACAD","type":"broad"},{"name":"negative regulation of activated T cell apoptosis","type":"broad"},{"name":"negative regulation of activated T lymphocyte autonomous cell death","type":"exact"},{"name":"negative regulation of activated T-cell autonomous cell death","type":"exact"},{"name":"negative regulation of activated T-lymphocyte autonomous cell death","type":"exact"},{"name":"negative regulation of activated cell autonomous cell death","type":"broad"}],"termid":"GO:0070240"}


id: GO:0030014
data:
  {"annotated_genes":["SJAG_04350","SJAG_01053","SJAG_03597","SJAG_01944","SJAG_02540","SJAG_00285","SJAG_00343","SJAG_03883","SJAG_04407"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73957,74322,75366,94126,69735,73620,116391,89571,92294],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030015"}]},"cv_name":"cellular_component","definition":"The Ccr4-Not complex is an eukaryotically conserved deadenylase that can initiate cytoplasmic mRNA decay, and reduce translation by releasing poly(A)-binding protein (Pab1/PABPC1). Ccr4-Not contains seven core subunits, including two poly(A)-specific exonucleases, Ccr4/CNOT6/CNOT6L and Caf1/Pop2/CNOT7/CNOT8.","definition_xrefs":["GOC:sart","PMID:11239395","PMID:22785621","PMID:30601114","PMID:11113136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_01053":null,"SJAG_01944":null,"SJAG_02540":null,"SJAG_03597":null,"SJAG_03883":null,"SJAG_04350":null,"SJAG_04407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CCR4-NOT complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030014","terms_by_termid":{"GO:0030015":null}}


id: PR:O14042
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 90B, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01772","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein fmp32, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.09","secondary_identifiers":["UniProtKB:O14042"],"synonyms":[{"name":"Spom972h-CCDC90B","type":"exact"}],"termid":"PR:O14042"}


id: PBO:0087414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit (60 kDa) of TFIID and SAGA complexes; involved in transcription initiation of RNA polymerase II and in chromatin modification, similar to histone H4; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087414"}


id: MONDO:0016371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cranial neuralgia","termid":"MONDO:0016374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"combined hyperactive dysfunction syndrome of the cranial nerves","secondary_identifiers":["Orphanet:221078","icd11.foundation:457686735","UMLS:C5190851","GARD:20541","MEDGEN:1677292"],"termid":"MONDO:0016371","xrefs":{"Monarch":{"xref_id":"0016371"}}}


id: PBO:0048830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 14","termid":"PBO:0048830"}


id: PBO:0065852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 3","termid":"PBO:0065852"}


id: GO:0006833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of water (H2O) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluid transport","termid":"GO:0042044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"water transport","secondary_identifiers":["Reactome:R-HSA-445717"],"termid":"GO:0006833"}


id: PBO:0080790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XNDC1N-ZNF705EP-ALG1L9P readthrough","termid":"PBO:0080790"}


id: FYPO:0005993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation in the cytoplasm is normal (i.e. indistinguishable from wild type). Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["PomBase:mah","GO:0002181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cytoplasmic translation","synonyms":[{"name":"normal cytoplasmic protein biosynthesis","type":"exact"},{"name":"normal cytoplasmic protein synthesis","type":"exact"},{"name":"normal cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"normal cytoplasmic translation during vegetative growth","type":"exact"}],"termid":"FYPO:0005993"}


id: GO:0035626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a juvenile hormone binding to its receptor, a bHLH-PAS transcription factor, to regulate gene expression.","definition_xrefs":["PMID:28285758","PMID:29888456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"intracellular receptor signaling pathway","termid":"GO:0030522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"juvenile hormone mediated signaling pathway","synonyms":[{"name":"juvenile hormone mediated signalling pathway","type":"exact"},{"name":"juvenile hormone-mediated signaling pathway","type":"exact"}],"termid":"GO:0035626"}


id: PBO:0003370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human MAPK organizer 1 (MORG1) family (predicted)","termid":"PBO:0003370"}


id: GO:0044804
data:
  {"annotated_genes":["SJAG_01722","SJAG_04991","SJAG_03851","SJAG_06309","SJAG_05289","SJAG_01274","SJAG_00004","SJAG_05017","SJAG_01561","SJAG_00115","SJAG_01135","SJAG_00645","SJAG_04655","SJAG_04963","SJAG_03100","SJAG_01283","SJAG_04232","SJAG_01783","SJAG_01382","SJAG_02100","SJAG_00355","SJAG_03718","SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71611,73261,78564,79596,99203,108360],"is_not":false,"summary":null,"term":"GO:0044804"},{"annotations":[71969,76699,72332,72408,79525,74199,71873,72843,73051,79757,73159,79503,79380,70066,71134,72872,76687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"}]},"cv_name":"biological_process","definition":"A form of autophagy, by which damaged or non-essential parts of the nucleus, or even an entire nucleus is degraded.","definition_xrefs":["GOC:jl","PMID:24013549","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00115":null,"SJAG_00355":null,"SJAG_00645":null,"SJAG_01135":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01561":null,"SJAG_01722":null,"SJAG_01783":null,"SJAG_02100":null,"SJAG_03100":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05017":null,"SJAG_05289":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"nucleophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"autophagy of nucleus","type":"exact"},{"name":"late nucleophagy","type":"narrow"},{"name":"nucleus degradation","type":"related"}],"termid":"GO:0044804","terms_by_termid":{"GO:0034727":null,"GO:0044804":null}}


id: PBO:0034296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_endoparasite","termid":"PBO:0034296"}


id: MONDO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the respiratory system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory system benign neoplasm","secondary_identifiers":["MEDGEN:635669","SCTID:255166003","DOID:0050621","NCIT:C8531","UMLS:C0497556"],"synonyms":[{"name":"respiratory system benign neoplasm","type":"exact"}],"termid":"MONDO:0000382","xrefs":{"Monarch":{"xref_id":"0000382"}}}


id: GO:0052504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of callose deposition by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont callose deposition (obsolete GO:0052504)","synonyms":[{"name":"induction by organism of defense-related papilla formation in symbiont","type":"narrow"},{"name":"induction by organism of defense-related symbiont callose deposition","type":"narrow"},{"name":"positive regulation by organism of defense-related papilla formation in symbiont","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont callose deposition","type":"exact"}],"termid":"GO:0052504"}


id: PBO:0087314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small subunit of the clathrin-associated adaptor complex AP-2; AP-2 is involved in protein sorting at the plasma membrane; related to the sigma subunit of the mammalian plasma membrane clathrin-associated protein (AP-2) complex","termid":"PBO:0087314"}


id: FYPO:0004961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is increased.","definition_xrefs":["PomBase:mah","PMID:12419251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at replication origin","synonyms":[{"name":"increased protein localisation to chromatin at replication origin","type":"exact"},{"name":"increased protein localization to chromatin at replication origins during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at replication origins during vegetative growth","type":"exact"}],"termid":"FYPO:0004961"}


id: PBO:0028875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_poly(A)_RNA_binding","termid":"PBO:0028875"}


id: FYPO:0000987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter results in a lower-than-normal level of transcription at a given pheromone level.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased transcriptional response to pheromone at normal pheromone level (obsolete FYPO:0000987)","synonyms":[{"name":"decreased positive regulation of transcription from RNA polymerase II promoter by pheromones at normal pheromone level","type":"exact"},{"name":"decreased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"decreased transcriptional response to pheromone","type":"related"},{"name":"reduced transcriptional response to pheromone at normal pheromone level","type":"exact"},{"name":"resistant to pheromone","type":"related"}],"termid":"FYPO:0000987"}


id: PBO:0084021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosylphosphatidylinositol-dependent cell wall protein; expression is periodic and decreases in respone to ergosterol perturbation or upon entry into stationary phase; depletion increases resistance to lactic acid","termid":"PBO:0084021"}


id: MONDO:0040679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm derived from the transitional epithelium of the urinary tract (urinary bladder, ureter, urethra, or renal pelvis). It is frequently papillary.","definition_xrefs":["NCIT:C4030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant urinary system neoplasm","termid":"MONDO:0006295"},{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"},{"relation_name":"is_a","term_name":"urothelial neoplasm","termid":"MONDO:0024337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urothelial carcinoma","secondary_identifiers":["UMLS:C2145472","EFO:0008528","MEDGEN:760495"],"synonyms":[{"name":"Uroepithelial carcinoma","type":"exact"},{"name":"transitional cell car. -uroth.","type":"exact"},{"name":"transitional cell carcinoma of the urinary tract","type":"exact"},{"name":"transitional cell carcinoma of the urothelial tract","type":"exact"},{"name":"urothelial carcinoma","type":"exact"}],"termid":"MONDO:0040679","xrefs":{"Monarch":{"xref_id":"0040679"}}}


id: PBO:0049112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 174","termid":"PBO:0049112"}


id: PBO:0014281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box protein Hmo1","termid":"PBO:0014281"}


id: PATO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000748 discrimination value (obsolete PATO:0000748)","termid":"PATO:0000748"}


id: GO:0102621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: emindole-SB + O2 + NADPH + H+ = 14,15-epoxyemindole-SB + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete emindole-SB NADPH:oxygen oxidoreductase (14,15-epoxidizing) activity (obsolete GO:0102621)","termid":"GO:0102621"}


id: PBO:0004769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Dad4","termid":"PBO:0004769"}


id: PBO:0027808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_KT5720","termid":"PBO:0027808"}


id: PR:Q09329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase UBR7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mlo2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.05","secondary_identifiers":["UniProtKB:Q09329"],"synonyms":[{"name":"Spom972h-UBR7","type":"exact"}],"termid":"PR:Q09329"}


id: MONDO:0001237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma arising from the appendix. The majority of lymphomas affecting the appendix represent disease extension from the intestinal wall; primary lymphomas of the appendix are rare.","definition_xrefs":["NCIT:C5513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendix cancer","termid":"MONDO:0001235"},{"relation_name":"is_a","term_name":"cecum lymphoma","termid":"MONDO:0002034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"appendix lymphoma","secondary_identifiers":["MEDGEN:231078","UMLS:C1332328","DOID:11241"],"synonyms":[{"name":"appendiceal lymphoma","type":"exact"},{"name":"appendix lymphoma","type":"exact"},{"name":"lymphoma of appendix","type":"exact"},{"name":"lymphoma of the appendix","type":"exact"},{"name":"lymphoma of vermiform appendix","type":"exact"},{"name":"primary appendix lymphoma","type":"exact"},{"name":"vermiform appendix lymphoma","type":"exact"}],"termid":"MONDO:0001237","xrefs":{"Monarch":{"xref_id":"0001237"}}}


id: MONDO:0002131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the jaw skeleton","direct_ancestors":[{"relation_name":"is_a","term_name":"skull cancer","termid":"MONDO:0002132"},{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"neoplasm of jaw","termid":"MONDO:0021580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"jaw cancer","secondary_identifiers":["SCTID:126634001","DOID:1862","UMLS:C0751255","MEDGEN:155838","MESH:D007573"],"synonyms":[{"name":"cancer of jaw skeleton","type":"exact"},{"name":"jaw neoplasm","type":"broad"},{"name":"jaw skeleton cancer","type":"exact"},{"name":"malignant jaw skeleton neoplasm","type":"exact"},{"name":"malignant neoplasm of jaw skeleton","type":"exact"},{"name":"neoplasm of jaw","type":"broad"}],"termid":"MONDO:0002131","xrefs":{"Monarch":{"xref_id":"0002131"}}}


id: MONDO:0011912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the MYO6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 37","secondary_identifiers":["OMIM:607821","DOID:0110495","GARD:22605","MEDGEN:375076","MESH:C564331","UMLS:C1843028"],"synonyms":[{"name":"DFNB37","type":"narrow"},{"name":"MYO6 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 37","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 37","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in MYO6","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 37","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 37","type":"exact"},{"name":"deafness, autosomal recessive 37","type":"narrow"},{"name":"deafness, autosomal recessive type 37","type":"narrow"}],"termid":"MONDO:0011912","xrefs":{"Monarch":{"xref_id":"0011912"}}}


id: MONDO:0003891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A signet ring cell carcinoma that involves the urinary bladder.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder adenocarcinoma","termid":"MONDO:0002751"},{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder signet ring cell adenocarcinoma","secondary_identifiers":["DOID:6481","NCIT:C6163","MEDGEN:231949","UMLS:C1332563"],"synonyms":[{"name":"bladder signet ring cell adenocarcinoma","type":"exact"},{"name":"signet Ring cell adenocarcinoma of bladder","type":"related"},{"name":"signet Ring cell adenocarcinoma of the bladder","type":"related"},{"name":"signet Ring cell adenocarcinoma of the urinary bladder","type":"related"},{"name":"signet Ring cell adenocarcinoma of urinary bladder","type":"related"},{"name":"signet ring cell adenocarcinoma of bladder","type":"related"},{"name":"urinary bladder signet Ring adenocarcinoma","type":"exact"},{"name":"urinary bladder signet ring cell carcinoma","type":"exact"}],"termid":"MONDO:0003891","xrefs":{"Monarch":{"xref_id":"0003891"}}}


id: GO:0090506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process that results in the initiation of an axillary shoot meristem. An axillary shoot meristem is a shoot meristem formed in the axil of a leaf.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem initiation","termid":"GO:0010014"},{"relation_name":"part_of","term_name":"secondary shoot formation","termid":"GO:0010223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axillary shoot meristem initiation","synonyms":[{"name":"axillary bud meristem initiation","type":"related"}],"termid":"GO:0090506"}


id: PBO:0058635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6767","termid":"PBO:0058635"}


id: GO:0015597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + polar amino acid(out) = ADP + phosphate + polar amino acid(in).","definition_xrefs":["EC:3.6.3.21","TC:3.A.1.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete histidine/arginine/lysine/ornithine porter activity (obsolete GO:0015597)","synonyms":[{"name":"histidine/arginine/lysine/ornithine porter activity","type":"exact"}],"termid":"GO:0015597"}


id: GO:0047843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-D-gluconate + A = 2,5-didehydro-D-gluconate + AH(2).","definition_xrefs":["EC:1.1.99.4","RHEA:12368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dehydrogluconate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R07153","MetaCyc:DEHYDROGLUCONATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"2-dehydro-D-gluconate:acceptor 2-oxidoreductase activity","type":"related"},{"name":"2-keto-D-gluconate dehydrogenase activity","type":"related"},{"name":"2-oxogluconate dehydrogenase activity","type":"related"},{"name":"alpha-ketogluconate dehydrogenase activity","type":"related"},{"name":"ketogluconate dehydrogenase activity","type":"related"}],"termid":"GO:0047843"}


id: PBO:0073625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIGLEC10 antisense RNA 1","termid":"PBO:0073625"}


id: GO:1902689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of NAD metabolic process.","definition_xrefs":["PMID:19846558","GOC:TermGenie","GO_REF:0000058","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"is_a","term_name":"regulation of NAD metabolic process","termid":"GO:1902688"},{"relation_name":"negatively_regulates","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"negative regulation of NAD metabolic process","synonyms":[{"name":"down regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"down regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"down regulation of NAD metabolic process","type":"exact"},{"name":"down regulation of NAD metabolism","type":"exact"},{"name":"down regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"down regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"down regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"down regulation of oxidized NAD metabolic process","type":"exact"},{"name":"down regulation of oxidized NAD metabolism","type":"exact"},{"name":"down regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"down regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"down-regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"down-regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"down-regulation of NAD metabolic process","type":"exact"},{"name":"down-regulation of NAD metabolism","type":"exact"},{"name":"down-regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"down-regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"down-regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"down-regulation of oxidized NAD metabolic process","type":"exact"},{"name":"down-regulation of oxidized NAD metabolism","type":"exact"},{"name":"down-regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"down-regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"downregulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"downregulation of NAD (oxidized) metabolism","type":"exact"},{"name":"downregulation of NAD metabolic process","type":"exact"},{"name":"downregulation of NAD metabolism","type":"exact"},{"name":"downregulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"downregulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"downregulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"downregulation of oxidized NAD metabolic process","type":"exact"},{"name":"downregulation of oxidized NAD metabolism","type":"exact"},{"name":"downregulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"downregulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"inhibition of NAD (oxidized) metabolic process","type":"narrow"},{"name":"inhibition of NAD (oxidized) metabolism","type":"narrow"},{"name":"inhibition of NAD metabolic process","type":"narrow"},{"name":"inhibition of NAD metabolism","type":"narrow"},{"name":"inhibition of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"inhibition of nicotinamide adenine dinucleotide metabolic process","type":"narrow"},{"name":"inhibition of nicotinamide adenine dinucleotide metabolism","type":"narrow"},{"name":"inhibition of oxidized NAD metabolic process","type":"narrow"},{"name":"inhibition of oxidized NAD metabolism","type":"narrow"},{"name":"inhibition of oxidized nicotinamide adenine dinucleotide metabolic process","type":"narrow"},{"name":"inhibition of oxidized nicotinamide adenine dinucleotide metabolism","type":"narrow"},{"name":"negative regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"negative regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"negative regulation of NAD metabolism","type":"exact"},{"name":"negative regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"negative regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"negative regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"negative regulation of oxidized NAD metabolic process","type":"exact"},{"name":"negative regulation of oxidized NAD metabolism","type":"exact"},{"name":"negative regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"negative regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:1902689"}


id: PBO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR51b (predicted)","termid":"PBO:0000835"}


id: GO:0006330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete single-stranded DNA binding (obsolete GO:0006330)","synonyms":[{"name":"single-stranded DNA binding","type":"exact"}],"termid":"GO:0006330"}


id: PBO:0029184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_trehalose_6-phosphate_level_during_heat_shock","termid":"PBO:0029184"}


id: MONDO:0018808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"Caroli syndrome","secondary_identifiers":["Orphanet:480520","UMLS:C5700203","DOID:0081394","GARD:21976","MEDGEN:1814547","NANDO:2200934"],"termid":"MONDO:0018808","xrefs":{"Monarch":{"xref_id":"0018808"}}}


id: MONDO:0013527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lissencephaly in which the cause of the disease is a mutation in the NDE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microlissencephaly","termid":"MONDO:0015204"},{"relation_name":"is_a","term_name":"microcephaly with lissencephaly and/or hydranencephaly","termid":"MONDO:0700116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0700092"],"is_obsolete":false,"name":"lissencephaly 4","secondary_identifiers":["UMLS:C3151461","MEDGEN:462811","DOID:0112235","OMIM:614019"],"synonyms":[{"name":"LIS4","type":"related"},{"name":"NDE1 lissencephaly (disease)","type":"exact"},{"name":"lissencephaly (disease) caused by mutation in NDE1","type":"exact"},{"name":"lissencephaly 4","type":"exact"},{"name":"lissencephaly 4 (with microcephaly)","type":"exact"},{"name":"lissencephaly 4 with microcephaly","type":"related"},{"name":"lissencephaly 4, with microcephaly","type":"related"},{"name":"lissencephaly type 4","type":"exact"}],"termid":"MONDO:0013527","xrefs":{"Monarch":{"xref_id":"0013527"}}}


id: PBO:0110499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPA1 pseudogene 2","termid":"PBO:0110499"}


id: MONDO:1012146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, non-human animal","termid":"MONDO:1011713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, domestic cat","secondary_identifiers":["OMIA:000621-9685"],"termid":"MONDO:1012146","xrefs":{"Monarch":{"xref_id":"1012146"}}}


id: GO:0050483
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69690],"is_not":false,"summary":null,"term":"GO:0050483"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'-IMP + H2O = inosine + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-nucleotidase activity","termid":"GO:0008253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"IMP 5'-nucleotidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:27718","MetaCyc:RXN-7607"],"synonyms":[{"name":"IMP 5' nucleotidase activity","type":"exact"},{"name":"IMP-GMP specific 5'-nucleotidase activity","type":"related"}],"termid":"GO:0050483","terms_by_termid":{"GO:0050483":null}}


id: GO:1902550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any lymphoid lineage cell migration into thymus that is involved in thymus epithelium morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:22342843","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid lineage cell migration into thymus","termid":"GO:0097535"},{"relation_name":"part_of","term_name":"thymus epithelium morphogenesis","termid":"GO:0097536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphoid lineage cell migration into thymus involved in thymus epithelium morphogenesis","synonyms":[{"name":"lymphoid lineage cell migration into thymus involved in thymic epithelium morphogenesis","type":"exact"},{"name":"lymphoid lineage restricted progenitor cell migration into thymus involved in thymic epithelium morphogenesis","type":"exact"},{"name":"lymphoid lineage restricted progenitor cell migration into thymus involved in thymus epithelium morphogenesis","type":"exact"}],"termid":"GO:1902550"}


id: GO:0000432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving glucose that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by glucose","termid":"GO:0000430"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription from RNA polymerase II promoter","termid":"GO:0000436"},{"relation_name":"is_a","term_name":"positive regulation of transcription by glucose","termid":"GO:0046016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription from RNA polymerase II promoter by glucose","synonyms":[{"name":"activation of transcription from RNA polymerase II promoter by glucose","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by glucose","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter by glucose","type":"exact"}],"termid":"GO:0000432"}


id: PBO:0071611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 29","termid":"PBO:0071611"}


id: FYPO:0007109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromere clustering is normal (i.e. indistinguishable from wild type during meiotic prometaphase I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic centromere clustering during meiotic prometaphase I","synonyms":[{"name":"normal centromere clustering during meiotic prometaphase I","type":"exact"},{"name":"normal chromosome retrieval during meiotic prometaphase I","type":"related"},{"name":"normal kinetochore retrieval during meiotic prometaphase I","type":"related"},{"name":"normal meiotic centromere clustering during prometaphase I","type":"exact"}],"termid":"FYPO:0007109"}


id: PBO:0085796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; computational analysis of large-scale protein-protein interaction data suggests a possible role in actin cytoskeleton organization; potential Cdc28p substrate","termid":"PBO:0085796"}


id: PR:Q10220
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit SPAC4H3.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.13","synonyms":[{"name":"Spom972h-pcc1","type":"exact"},{"name":"protein PCC1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10220"}


id: PBO:0041851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1 pseudogene 1","termid":"PBO:0041851"}


id: GO:0032720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production.","definition_xrefs":["PMID:10891884","PMID:15560120","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor production","termid":"GO:0032680"},{"relation_name":"is_a","term_name":"negative regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903556"},{"relation_name":"negatively_regulates","term_name":"tumor necrosis factor production","termid":"GO:0032640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tumor necrosis factor production","secondary_identifiers":["GO:1904468","GO:0042536"],"synonyms":[{"name":"down regulation of tumor necrosis factor production","type":"exact"},{"name":"down-regulation of tumor necrosis factor production","type":"exact"},{"name":"downregulation of tumor necrosis factor production","type":"exact"},{"name":"inhibition of cachectin production","type":"narrow"},{"name":"inhibition of tumor necrosis factor production","type":"narrow"},{"name":"negative regulation TNF production","type":"exact"},{"name":"negative regulation TNF-alpha production","type":"exact"},{"name":"negative regulation of tumor necrosis factor biosynthetic process","type":"narrow"},{"name":"negative regulation of tumor necrosis factor secretion","type":"narrow"},{"name":"negative regulation tumor necrosis factor-alpha production","type":"exact"}],"termid":"GO:0032720"}


id: PBO:0071605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 23","termid":"PBO:0071605"}


id: PBO:0049189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate and hydroxypyruvate reductase","termid":"PBO:0049189"}


id: _global:results_in_determination_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p 'results in determination of' c if and only if p is a developmental process and c is a cell and p results in the state of c changing to be determined. Once a cell becomes determined, it becomes committed to differentiate down a particular pathway regardless of its environment.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_determination_of","secondary_identifiers":["RO:0002349","GOREL:0001018"],"termid":"_global:results_in_determination_of"}


id: PBO:0083819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and import into the ER; other members are Sec62p, Sec66p, and Sec72p","termid":"PBO:0083819"}


id: GO:0046729
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stable empty viral capsid produced during the assembly of viruses.","definition_xrefs":["ISBN:0072370319","ISBN:1555811272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral procapsid","termid":"GO:0046729"}


id: GO:0003217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a cardiac right atrium from unspecified parts.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac atrium formation","termid":"GO:0003210"},{"relation_name":"part_of","term_name":"cardiac right atrium morphogenesis","termid":"GO:0003213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac right atrium formation","termid":"GO:0003217"}


id: MONDO:0033654
data:
  {"annotated_genes":["SJAG_00852"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85549],"is_not":false,"summary":null,"term":"MONDO:0033654"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 19","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070504","UMLS:C5436723","GARD:16416","MEDGEN:1729504","OMIM:619063"],"synonyms":[{"name":"MC4DN19","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 19","type":"exact"}],"termid":"MONDO:0033654","terms_by_termid":{"MONDO:0033654":null},"xrefs":{"Monarch":{"xref_id":"0033654"}}}


id: PBO:0075513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 2 pseudogene 4","termid":"PBO:0075513"}


id: PBO:0048714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 5","termid":"PBO:0048714"}


id: GO:0001174
data:
  {"annotated_genes":["SJAG_01523"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77045],"is_not":false,"summary":null,"term":"GO:0001174"}]},"cv_name":"biological_process","definition":"Any process involved in the selection of the specific location within the template strand of an RNA polymerase II promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.","definition_xrefs":["GOC:txnOH","PMID:16826228","PMID:18846104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcriptional start site selection","termid":"GO:0001173"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01523":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"transcriptional start site selection at RNA polymerase II promoter","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0001174","terms_by_termid":{"GO:0001174":null}}


id: GO:0051589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter transport","termid":"GO:0051588"},{"relation_name":"negatively_regulates","term_name":"neurotransmitter transport","termid":"GO:0006836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of neurotransmitter transport","synonyms":[{"name":"down regulation of neurotransmitter transport","type":"exact"},{"name":"down-regulation of neurotransmitter transport","type":"exact"},{"name":"downregulation of neurotransmitter transport","type":"exact"},{"name":"inhibition of neurotransmitter transport","type":"narrow"}],"termid":"GO:0051589"}


id: MONDO:0009399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperphosphatemia, polyuria, and seizures","secondary_identifiers":["UMLS:C1855922","OMIM:239350","MEDGEN:343444","MESH:C565494"],"synonyms":[{"name":"hyperphosphatemia, polyuria, and seizures","type":"exact"}],"termid":"MONDO:0009399","xrefs":{"Monarch":{"xref_id":"0009399"}}}


id: PBO:0039157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 4","termid":"PBO:0039157"}


id: GO:1903241
data:
  {"annotated_genes":["SJAG_02558","SJAG_00498","SJAG_00313"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106564,112242,113640],"is_not":false,"summary":null,"term":"GO:1903241"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an U2-type prespliceosome.","definition_xrefs":["PMID:12374752","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex assembly","termid":"GO:0000245"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00313":null,"SJAG_00498":null,"SJAG_02558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0010467","GO:0016071","GO:0044085"],"is_obsolete":false,"name":"U2-type prespliceosome assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG prespliceosome assembly","type":"narrow"},{"name":"GT-AG prespliceosome formation","type":"narrow"},{"name":"U2-type prespliceosome formation","type":"exact"},{"name":"major prespliceosome assembly","type":"exact"},{"name":"major prespliceosome formation","type":"exact"},{"name":"mammalian U2-type spliceosomal complex A assembly","type":"narrow"},{"name":"mammalian U2-type spliceosomal complex A formation","type":"narrow"},{"name":"yeast U2-type spliceosomal complex B assembly","type":"narrow"},{"name":"yeast U2-type spliceosomal complex B formation","type":"narrow"}],"termid":"GO:1903241","terms_by_termid":{"GO:1903241":null}}


id: MONDO:0011190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the INVS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis 2","secondary_identifiers":["MEDGEN:355574","MESH:C566582","OMIM:602088","UMLS:C1865872","Orphanet:93591","GARD:18182","DOID:0111113"],"synonyms":[{"name":"INVS nephronophthisis (disease)","type":"exact"},{"name":"NPH2","type":"exact"},{"name":"NPHP2","type":"exact"},{"name":"Nph2","type":"related"},{"name":"infantile nephronophthisis 2","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in INVS","type":"exact"},{"name":"nephronophthisis 2","type":"exact"},{"name":"nephronophthisis 2, infantile","type":"exact"},{"name":"nephronophthisis type 2","type":"exact"}],"termid":"MONDO:0011190","xrefs":{"Monarch":{"xref_id":"0011190"}}}


id: PBO:0030940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_ubiquitination","termid":"PBO:0030940"}


id: PBO:0079131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tsukushi, small leucine rich proteoglycan","termid":"PBO:0079131"}


id: PBO:0071656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 20","termid":"PBO:0071656"}


id: PBO:0059550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Arg (CGN)","termid":"PBO:0059550"}


id: PBO:0027649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_abnormal_cell_morphology_and_abnormal_actin_cortical_patch_localization","termid":"PBO:0027649"}


id: PBO:0060665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDC1 transmembrane nucleoporin","termid":"PBO:0060665"}


id: GO:0072490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving toluene, methylbenzene (formula C7H8), or any of its derivatives.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene-containing compound metabolic process","synonyms":[{"name":"toluene and derivative metabolic process","type":"exact"},{"name":"toluene-containing compound metabolism","type":"exact"}],"termid":"GO:0072490"}


id: PBO:0047451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCH and mu domain containing endocytic adaptor 1","termid":"PBO:0047451"}


id: MONDO:0017889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucinous tubular and spindle cell renal carcinoma (obsolete MONDO:0017889)","termid":"MONDO:0017889","xrefs":{"Monarch":{"xref_id":"0017889"}}}


id: GO:1903436
data:
  {"annotated_genes":["SJAG_03704","SJAG_01188","SJAG_04468","SJAG_04597","SJAG_03631","SJAG_02392","SJAG_00256","SJAG_03581","SJAG_01114","SJAG_03048","SJAG_02380","SJAG_04776","SJAG_02838","SJAG_02592","SJAG_00845","SJAG_04666","SJAG_03309","SJAG_00082","SJAG_00514","SJAG_03936","SJAG_05290","SJAG_01787","SJAG_03342","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[103490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[102167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[89787,94205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[110317,94206,113154,94374,87324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[90562,110559,119095,103495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[89657,117688,104982,77714,106183,92214,93600,113155,115263,106847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[94209,87325,92215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[93606,119003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[87641,101188,111170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cytokinetic process.","definition_xrefs":["GO_REF:0000058","GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinetic process","termid":"GO:0032954"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis","termid":"GO:1902412"},{"relation_name":"regulates","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00256":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic cytokinetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"termid":"GO:1903436","terms_by_termid":{"GO:0120306":null,"GO:0140281":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null}}


id: PBO:0049582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.7 histone (putative)","termid":"PBO:0049582"}


id: MONDO:0012144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome type 2 in which the cause of the disease is a mutation in the SNAI2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome type 2","termid":"MONDO:0019517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2D","secondary_identifiers":["UMLS:C1837203","OMIM:608890","MESH:C563839","DOID:0110952","MEDGEN:323102"],"synonyms":[{"name":"SNAI2 Waardenburg syndrome type 2","type":"exact"},{"name":"WS2D","type":"exact"},{"name":"Waardenburg syndrome type 2 caused by mutation in SNAI2","type":"exact"},{"name":"Waardenburg syndrome type IID","type":"exact"},{"name":"Waardenburg syndrome, type 2D","type":"related"}],"termid":"MONDO:0012144","xrefs":{"Monarch":{"xref_id":"0012144"}}}


id: PBO:0029046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sodium_import","termid":"PBO:0029046"}


id: GO:0043824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-succinyl-L-glutamate 5-semialdehyde + H2O + NAD+ = N-succinyl-L-glutamate + 2 H+ + NADH.","definition_xrefs":["RHEA:10812","EC:1.2.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"succinylglutamate-semialdehyde dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05049","MetaCyc:SUCCGLUALDDEHYD-RXN"],"synonyms":[{"name":"AruD","type":"related"},{"name":"AstD","type":"related"},{"name":"N-succinyl-L-glutamate 5-semialdehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"N-succinylglutamate 5-semialdehyde dehydrogenase activity","type":"related"},{"name":"SGSD","type":"related"},{"name":"succinyl glutamate-semialdehyde dehydrogenase activity","type":"exact"},{"name":"succinylglutamic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0043824"}


id: MOD:01901
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks two L-threonine residues to form L-threonine 5-methyloxazole-4-carboxylic acid.","definition_xrefs":["PubMed:21950656","PubMed:21568297","RESID:AA0572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Thr)","termid":"MOD:01422"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine 5-methyloxazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S,2R)-1-amino-2-hydroxypropyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1S,2R)-1-azanyl-2-hydroxypropyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-methyloxazole-4-carboxylic acid (Thr-Thr)","type":"exact"},{"name":"L-threonine 5-methyloxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01901"}


id: MONDO:0958263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated micronodular adrenocortical disease","secondary_identifiers":["Orphanet:647782","UMLS:C5816756","MEDGEN:1853162"],"termid":"MONDO:0958263","xrefs":{"Monarch":{"xref_id":"0958263"}}}


id: GO:0008337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class of cell adhesion molecules that bind to carbohydrate via a lectin-like domain; integral membrane glycoproteins.","definition_xrefs":["ISBN:0124325653"],"gene_count":0,"genotype_count":0,"name":"obsolete selectin (obsolete GO:0008337)","synonyms":[{"name":"selectin","type":"exact"}],"termid":"GO:0008337"}


id: GO:0052517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of programmed cell death in the symbiont, where programmed cell death proceeds by a non-apoptotic pathway. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont non-apoptotic programmed cell death (obsolete GO:0052517)","synonyms":[{"name":"positive regulation by organism of symbiont non-apoptotic programmed cell death","type":"exact"}],"termid":"GO:0052517"}


id: MONDO:0020020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete visceral malformation of the liver, biliary tract, pancreas or spleen (obsolete MONDO:0020020)","secondary_identifiers":["Orphanet:98041"],"termid":"MONDO:0020020","xrefs":{"Monarch":{"xref_id":"0020020"}}}


id: PBO:0045803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroid differentiation regulatory factor 1","termid":"PBO:0045803"}


id: PBO:0073152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24 homolog D, COPII coat complex component","termid":"PBO:0073152"}


id: PBO:0080221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasoactive intestinal peptide receptor 1","termid":"PBO:0080221"}


id: PBO:0046505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 1","termid":"PBO:0046505"}


id: PBO:0046775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosin like glycosyltransferase 1","termid":"PBO:0046775"}


id: MONDO:0004016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system mature teratoma","termid":"MONDO:0003733"},{"relation_name":"is_a","term_name":"pineal region teratoma","termid":"MONDO:0004015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pineal region mature teratoma","secondary_identifiers":["NCIT:C6754","DOID:6857","MEDGEN:233329","UMLS:C1335417"],"synonyms":[{"name":"mature teratoma of pineal area","type":"exact"},{"name":"mature teratoma of pineal region","type":"exact"},{"name":"mature teratoma of the pineal area","type":"exact"},{"name":"mature teratoma of the pineal region","type":"exact"},{"name":"pineal area mature teratoma","type":"exact"}],"termid":"MONDO:0004016","xrefs":{"Monarch":{"xref_id":"0004016"}}}


id: PBO:0060070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 17","termid":"PBO:0060070"}


id: PBO:0088292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH associated cyclin-dependent protein kinase Mcs6","termid":"PBO:0088292"}


id: MONDO:0012936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, chronic lymphocytic, susceptibility to, 5","secondary_identifiers":["OMIM:612559","UMLS:C2675514","MEDGEN:436452"],"synonyms":[{"name":"Clls5","type":"related"},{"name":"leukemia, chronic lymphocytic susceptibility to, 5","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, 5","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, type 5","type":"exact"}],"termid":"MONDO:0012936","xrefs":{"Monarch":{"xref_id":"0012936"}}}


id: MONDO:0015901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare inherited hyperlipidemia (obsolete MONDO:0015901)","secondary_identifiers":["ICD9:272.4","ICD10CM:E78.5","Orphanet:181422"],"synonyms":[{"name":"rare hyperlipidemia","type":"related"}],"termid":"MONDO:0015901","xrefs":{"Monarch":{"xref_id":"0015901"}}}


id: GO:1901641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ITP.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate binding","termid":"GO:0035639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ITP binding","termid":"GO:1901641"}


id: PBO:0052278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5D pseudogene 1","termid":"PBO:0052278"}


id: GO:0018651
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: toluene-4-sulfonate + 1/2 O2 + H+ = HSO3(-) + 4-hydroxytoluene.","definition_xrefs":["UM-BBD_reactionID:r0296"],"gene_count":0,"genotype_count":0,"name":"obsolete toluene-4-sulfonate monooxygenase activity (obsolete GO:0018651)","synonyms":[{"name":"toluene-4-sulphonate monooxygenase activity","type":"exact"}],"termid":"GO:0018651"}


id: PBO:0066243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 1","termid":"PBO:0066243"}


id: PBO:0065040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 5","termid":"PBO:0065040"}


id: SO:0000932
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript that, at least in part, encodes one or more proteins that has not been edited.","direct_ancestors":[{"relation_name":"is_a","term_name":"protein_coding_primary_transcript","termid":"SO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre_edited_mRNA","synonyms":[{"name":"pre-edited mRNA","type":"exact"}],"termid":"SO:0000932"}


id: PBO:0044876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 5A","termid":"PBO:0044876"}


id: FYPO:0000304
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[119042,119054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000726"},{"annotations":[119041,119053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a stress. Typically, a cell population is deemed sensitive to a stress if cells in the population stop growing (and may die) when exposed to the stress at an intensity that allows a population of wild type cells to grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell population growth phenotype","termid":"FYPO:0001358"},{"relation_name":"is_a","term_name":"sensitive to stress","termid":"FYPO:0002549"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":3,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to stress during vegetative growth","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266","SJAG_04312"],"single_locus_genotype_uniquenames":["pka1delta","atf1delta","sty1delta"],"synonyms":[{"name":"decreased growth during cellular response to stress during vegetative growth","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to stress during vegetative growth","type":"exact"},{"name":"hypersensitive to stress during vegetative growth","type":"exact"},{"name":"sensitive to stress during mitotic cell cycle","type":"related"},{"name":"stress resistance: decreased during vegetative growth","type":"related"}],"termid":"FYPO:0000304","terms_by_termid":{"FYECO:0000078":null,"FYECO:0000207":null,"FYPO:0000087":null,"FYPO:0000271":null,"FYPO:0000726":null,"FYPO_EXT:0000001":null}}


