# terms

id: MONDO:0014994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"global developmental delay, absent or hypoplastic corpus callosum, and dysmorphic facies","secondary_identifiers":["MEDGEN:934611","UMLS:C4310644","OMIM:617260"],"synonyms":[{"name":"GDACCF","type":"exact"},{"name":"global developmental delay, absent or hypoplastic corpus callosum, and dysmorphic facies","type":"exact"},{"name":"global developmental delay, absent or hypoplastic corpus callosum, and dysmorphic facies; GDACCF","type":"exact"}],"termid":"MONDO:0014994","xrefs":{"Monarch":{"xref_id":"0014994"}}}


id: PBO:0002711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl aminopeptidase Aap1","termid":"PBO:0002711"}


id: PBO:0045579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 1","termid":"PBO:0045579"}


id: PBO:0039885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 2","termid":"PBO:0039885"}


id: MONDO:0004054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammation of lacrimal passage","termid":"MONDO:0004055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute canaliculitis","secondary_identifiers":["DOID:6969","UMLS:C0339130","SCTID:84399007","ICD9:375.31","MEDGEN:572974"],"synonyms":[{"name":"acute canaliculitis, lacrimal","type":"exact"},{"name":"acute lacrimal canaliculitis","type":"exact"}],"termid":"MONDO:0004054","xrefs":{"Monarch":{"xref_id":"0004054"}}}


id: MOD:00348
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-carbamoyl-L-alanine.","definition_xrefs":["RESID:AA0343","PubMed:12203680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-aminocarbamoylated residue","termid":"MOD:01679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carbamoyl-L-alanine","synonyms":[{"name":"(S)-2-(carbamoylamino)propanoic acid","type":"exact"},{"name":"2-ureidopropanoic acid","type":"exact"},{"name":"MOD_RES N-carbamoylalanine","type":"exact"},{"name":"N-carbamoyl-L-alanine","type":"exact"},{"name":"N-carbamylalanine","type":"exact"},{"name":"N2CbmAla","type":"exact"}],"termid":"MOD:00348"}


id: MONDO:0003439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exophytic glandular neoplasm of the bladder, morphologically similar to its intestinal counterpart. It often coexists with in situ or infiltrating bladder adenocarcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"villous adenoma","termid":"MONDO:0000502"},{"relation_name":"is_a","term_name":"urinary bladder neoplasm","termid":"MONDO:0004987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary bladder villous adenoma","secondary_identifiers":["DOID:5427","NCIT:C7414","MEDGEN:234977","UMLS:C1336893"],"synonyms":[{"name":"bladder villous adenoma","type":"exact"},{"name":"urinary bladder villous adenoma","type":"exact"},{"name":"villous adenoma of the urinary bladder","type":"exact"},{"name":"villous adenoma of urinary bladder","type":"exact"}],"termid":"MONDO:0003439","xrefs":{"Monarch":{"xref_id":"0003439"}}}


id: MONDO:0003033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the prostate.","definition_xrefs":["NCIT:C5528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate sarcoma","termid":"MONDO:0002854"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate angiosarcoma","secondary_identifiers":["MEDGEN:235498","DOID:4524","UMLS:C1335504"],"synonyms":[{"name":"angiosarcoma (disease) of prostate gland","type":"exact"},{"name":"angiosarcoma of prostate","type":"exact"},{"name":"angiosarcoma of the prostate","type":"exact"},{"name":"hemangiosarcoma of prostate","type":"exact"},{"name":"hemangiosarcoma of the prostate","type":"exact"},{"name":"prostate angiosarcoma","type":"exact"},{"name":"prostate gland angiosarcoma (disease)","type":"exact"},{"name":"prostate hemangiosarcoma","type":"exact"},{"name":"prostatic angiosarcoma","type":"exact"},{"name":"prostatic hemangiosarcoma","type":"exact"}],"termid":"MONDO:0003033","xrefs":{"Monarch":{"xref_id":"0003033"}}}


id: GO:0045498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sex comb over time, from its formation to the mature structure. The sex combs are the male specific chaetae located on the prothoracic tarsal segment of the prothoracic leg.","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex comb development","termid":"GO:0045498"}


id: PBO:0038475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 13","termid":"PBO:0038475"}


id: MONDO:1010592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperparathyroidism that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperparathyroidism, non-human animal","termid":"MONDO:1010054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparathyroidism, domestic cat","secondary_identifiers":["OMIA:000508-9685"],"termid":"MONDO:1010592","xrefs":{"Monarch":{"xref_id":"1010592"}}}


id: GO:0022414
data:
  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id: MONDO:0017393
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  {"annotated_genes":["SJAG_00156","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010477"},{"annotations":[86333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011365"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_02165":null},"genotype_count":0,"is_obsolete":false,"name":"blepharophimosis - intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1698793","Orphanet:293642","UMLS:C5229849","GARD:10892"],"synonyms":[{"name":"BMRS","type":"exact"},{"name":"SBBYS syndrome","type":"related"},{"name":"Say Barber Biesecker Young-Simpson syndrome","type":"related"},{"name":"Young Simpson syndrome","type":"related"},{"name":"blepharophimosis intellectual disability syndromes","type":"related"},{"name":"blepharophimosis mental retardation syndromes","type":"related"},{"name":"blepharophimosis syndrome Ohdo type","type":"related"}],"termid":"MONDO:0017393","terms_by_termid":{"MONDO:0010477":null,"MONDO:0011365":null},"xrefs":{"Monarch":{"xref_id":"0017393"}}}


id: GO:0061405
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hydrostatic pressure stimulus. Hydrostatic pressure is the force acting on an object in a system where the fluid is at rest (as opposed to moving). The weight of the fluid above the object creates pressure on it.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to hydrostatic pressure (obsolete GO:0061405)","termid":"GO:0061405"}


id: GO:2000813
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of barbed-end actin filament capping.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of actin filament depolymerization","termid":"GO:0030836"},{"relation_name":"is_a","term_name":"positive regulation of actin filament polymerization","termid":"GO:0030838"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of barbed-end actin filament capping","termid":"GO:2000812"},{"relation_name":"negatively_regulates","term_name":"barbed-end actin filament capping","termid":"GO:0051016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007010","GO:0065003","GO:0030036"],"is_obsolete":false,"name":"negative regulation of barbed-end actin filament capping","synonyms":[{"name":"negative regulation of barbed-end F-actin capping activity","type":"exact"},{"name":"negative regulation of barbed-end actin capping activity","type":"exact"},{"name":"negative regulation of plus-end F-actin capping activity","type":"exact"},{"name":"negative regulation of plus-end actin filament capping activity","type":"exact"}],"termid":"GO:2000813"}


id: GO:0010490
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-4-keto-rhamnose + NADPH = UDP-rhamnose + NADP+.","definition_xrefs":["GOC:tair_curators","PMID:17190829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-4-keto-rhamnose-4-keto-reductase activity","termid":"GO:0010490"}


id: MONDO:0010846
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id: MONDO:0016668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sickle beta thalassemia is an inherited condition that affects hemoglobin, the protein in red blood cells that carries oxygen to different parts of the body.It is a type of sickle cell disease. Affected people have a differentchange (mutation) in each copy of their HBB gene: onethat causes red blood cells to form a 'sickle' or crescent shape and a second that is associated with beta thalassemia, a blood disorder that reduces the production of hemoglobin. Depending on the beta thalassemia mutation, people may have no normal hemoglobin (called sickle beta zero thalassemia) or a reduced amount of normal hemoglobin (called sickle beta plus thalassemia). The presence of sickle-shaped red blood cells, which often breakdown prematurely and can get stuck in blood vessels, combined with the reduction or absence of mature redblood cells leads to the many signs and symptoms of sickle beta thalassemia. Features, which may include anemia (low levels of red blood cells), repeated infections, and frequent episodes of pain, generally develop in early childhood and vary in severity depending on the amount of normal hemoglobin made. Sickle beta thalassemia is inherited in an autosomal recessive manner. Treatment is supportive and depends on the signs and symptoms present in each person.","definition_xrefs":["GARD:0010333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"sickle cell-beta-thalassemia disease syndrome","secondary_identifiers":["SCTID:127041004","GARD:10333","NCIT:C95539","Orphanet:251359","MedDRA:10055579","MedDRA:10040655"],"synonyms":[{"name":"Haemoglobin sickle-beta thalassemia","type":"related"},{"name":"Hb S beta-thalassemia","type":"related"},{"name":"Hb S-Beta thalassemia","type":"exact"},{"name":"HbS - beta-thalassemia","type":"related"},{"name":"HbS-beta-thalassemia syndrome","type":"exact"},{"name":"Hemoglobin sickle-beta thalassemia","type":"related"},{"name":"S-Beta thalassemia","type":"exact"},{"name":"sickle beta thalassemia","type":"related"},{"name":"sickle cell - beta-thalassemia disease","type":"related"},{"name":"sickle cell-Beta thalassemia","type":"exact"},{"name":"sickle cell-Beta-thalassemia","type":"exact"},{"name":"sickle cell-beta-thalassemia disease syndrome","type":"exact"}],"termid":"MONDO:0016668","xrefs":{"Monarch":{"xref_id":"0016668"}}}


id: FYPO:0004357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitosis","secondary_identifiers":["FYPO:0002832"],"synonyms":[{"name":"decreased protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during mitotic M phase","type":"related"},{"name":"decreased protein phosphorylation during mitotic M-phase","type":"related"},{"name":"decreased protein phosphorylation during mitotic nuclear division","type":"exact"},{"name":"decreased protein/peptide phosphorylation during mitosis","type":"exact"},{"name":"reduced protein phosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0004357"}


id: PBO:0083480
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL134W/LCB3","termid":"PBO:0083480"}


id: PBO:0085360
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoprotein involved in vacuole inheritance; degraded in late M phase of the cell cycle; acts as a vacuole-specific receptor for myosin Myo2p; involved in regulation of asymmetric inheritance of aggregated/misfolded proteins and age reset","termid":"PBO:0085360"}


id: GO:1905367
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intralumenal vesicle formation.","definition_xrefs":["GOC:bc","GO_REF:0000058","GOC:TermGenie","PMID:26911690","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of endosome organization","termid":"GO:1904980"},{"relation_name":"is_a","term_name":"regulation of intralumenal vesicle formation","termid":"GO:1905365"},{"relation_name":"positively_regulates","term_name":"intralumenal vesicle formation","termid":"GO:0070676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"positive regulation of intralumenal vesicle formation","synonyms":[{"name":"activation of endosome membrane budding","type":"narrow"},{"name":"activation of intralumenal vesicle formation","type":"narrow"},{"name":"positive regulation of endosome membrane budding","type":"exact"},{"name":"up regulation of endosome membrane budding","type":"exact"},{"name":"up regulation of intralumenal vesicle formation","type":"exact"},{"name":"up-regulation of endosome membrane budding","type":"exact"},{"name":"up-regulation of intralumenal vesicle formation","type":"exact"},{"name":"upregulation of endosome membrane budding","type":"exact"},{"name":"upregulation of intralumenal vesicle formation","type":"exact"}],"termid":"GO:1905367"}


id: FYPO:0000261
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. Multiple different phenotypes due to a single mutation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pleiotropic effects (obsolete FYPO:0000261)","synonyms":[{"name":"pleiotropic effects during vegetative growth","type":"exact"}],"termid":"FYPO:0000261"}


id: PBO:0028940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(U)_polymerase_activity","termid":"PBO:0028940"}


id: PBO:0046368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 4","termid":"PBO:0046368"}


id: FYPO:0002937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased pre-mRNA level","synonyms":[{"name":"decreased accumulation of pre-mRNA transcripts","type":"related"},{"name":"decreased pre-mRNA accumulation","type":"related"},{"name":"decreased pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"decreased pre-mRNA level during vegetative growth","type":"exact"},{"name":"decreased pre-mRNA transcript level","type":"exact"},{"name":"reduced pre-mRNA level","type":"exact"}],"termid":"FYPO:0002937"}


id: PBO:0040100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"artemin","termid":"PBO:0040100"}


id: PBO:0054914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2328","termid":"PBO:0054914"}


id: PBO:0031457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_N-ethylmaleimide","termid":"PBO:0031457"}


id: MONDO:0017566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"macrodactyly of toes","termid":"MONDO:0017475"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrodactyly of toes, unilateral","secondary_identifiers":["icd11.foundation:1009940304","MEDGEN:1843435","Orphanet:295243","UMLS:C5679988","GARD:21229"],"synonyms":[{"name":"macrodactyly of foot, unilateral","type":"exact"}],"termid":"MONDO:0017566","xrefs":{"Monarch":{"xref_id":"0017566"}}}


id: GO:2000713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:2000713)","synonyms":[{"name":"negative regulation of maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:2000713"}


id: SO:0001152
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type VIa beta turn with the following phi and psi sngles on amino acid residues 2 and 3: phi-2 = -60 degrees, psi-2 = 120 degrees, phi-3 = -90 degrees, psi-3 = 0 degrees.","definition_xrefs":["PMID:27428516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn_type_six_a","termid":"SO:0001151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_six_a_one","synonyms":[{"name":"beta turn type six a one","type":"exact"},{"name":"type VIa1 beta turn","type":"exact"},{"name":"type VIa1 turn","type":"exact"}],"termid":"SO:0001152"}


id: PBO:0017922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transmembrane transporter (predicted)","termid":"PBO:0017922"}


id: PBO:0091639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular phospholipase","termid":"PBO:0091639"}


id: FYPO:0006270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to phosphate starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to phosphate starvation","termid":"FYPO:0003195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to phosphate starvation","synonyms":[{"name":"increased RNA accumulation during cellular response to phosphate starvation","type":"related"},{"name":"increased RNA level during cellular response to phosphate depletion","type":"exact"},{"name":"increased RNA level during cellular response to phosphate deprivation","type":"exact"},{"name":"increased RNA level during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"increased RNA level during phosphate starvation","type":"exact"},{"name":"increased mRNA level during cellular response to phosphate starvation","type":"narrow"},{"name":"increased transcript level during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0006270"}


id: PBO:0059309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51","termid":"PBO:0059309"}


id: PBO:0063442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6D","termid":"PBO:0063442"}


id: PBO:0039389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylase alpha pseudogene 1","termid":"PBO:0039389"}


id: GO:0047034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + (15S)-15-hydroxy-5,8,11-cis-13-trans-icosatetraenoate = NAD(P)H + H+ + 15-oxo-5,8,11-cis-13-trans-icosatetraenoate.","definition_xrefs":["MetaCyc:1.1.1.232-RXN","EC:1.1.1.232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"15-hydroxyicosatetraenoate dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-2161789"],"synonyms":[{"name":"(15S)-15-hydroxy-5,8,11-cis-13-trans-icosatetraenoate:NAD(P)+ 15-oxidoreductase activity","type":"related"},{"name":"15-hydroxyeicosatetraenoate dehydrogenase activity","type":"related"}],"termid":"GO:0047034"}


id: PBO:0078780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 5-1","termid":"PBO:0078780"}


id: PBO:0030527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin","termid":"PBO:0030527"}


id: FYPO:0001891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in late meiosis in which the amount of RNA transcribed from middle meiotic genes measured in a cell is higher than normal. Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:22558440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during meiotic cell cycle","termid":"FYPO:0005120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased level of middle meiotic gene mRNA during late meiosis","synonyms":[{"name":"increased RNA level of middle meiotic genes during late meiosis","type":"exact"},{"name":"increased level of middle meiosis gene mRNA during late meiosis","type":"exact"},{"name":"increased level of middle meiotic gene RNA during late meiosis","type":"exact"},{"name":"increased level of middle meiotic gene RNA during late meiotic nuclear division","type":"exact"},{"name":"increased level of middle meiotic gene transcripts during late meiosis","type":"exact"}],"termid":"FYPO:0001891"}


id: MONDO:0003771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the jugular foramen.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"skull neoplasm","termid":"MONDO:0024653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jugular foramen meningioma","secondary_identifiers":["NCIT:C5293","UMLS:C1334298","DOID:6110","MEDGEN:233586"],"synonyms":[{"name":"jugular foramen meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of jugular foramen","type":"exact"},{"name":"meningioma of jugular Foramen","type":"exact"},{"name":"meningioma of the jugular Foramen","type":"exact"}],"termid":"MONDO:0003771","xrefs":{"Monarch":{"xref_id":"0003771"}}}


id: GO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase in the context of cell wall organization or biogenesis.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK activity involved in cell wall organization or biogenesis (obsolete GO:0000197)","synonyms":[{"name":"activation of MAP kinase kinase kinase activity during cell wall biogenesis","type":"exact"},{"name":"activation of MAPKKK activity involved in cell wall biogenesis","type":"related"},{"name":"activation of MAPKKK activity involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, activation of MAP kinase kinase kinase activity","type":"exact"},{"name":"cell wall biogenesis, activation of MAPKKK activity","type":"exact"}],"termid":"GO:0000197"}


id: SO:0001072
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region that is localized outside of a lipid bilayer.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"},{"relation_name":"part_of","term_name":"membrane_structure","termid":"SO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"extramembrane_polypeptide_region","secondary_identifiers":["BS:00154"],"synonyms":[{"name":"extramembrane","type":"related"},{"name":"extramembrane polypeptide region","type":"exact"},{"name":"extramembrane_region","type":"related"},{"name":"topo_dom","type":"related"}],"termid":"SO:0001072"}


id: GO:0051212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vanadium ion (V).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0046872"],"is_obsolete":false,"name":"vanadium ion binding","synonyms":[{"name":"V ion binding","type":"exact"}],"termid":"GO:0051212"}


id: PBO:0070648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 19","termid":"PBO:0070648"}


id: PBO:0063962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase like 1","termid":"PBO:0063962"}


id: FYPO:0003921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic rDNA repeat spacer occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at rDNA repeats","termid":"FYPO:0003089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased replication fork arrest at rDNA repeats","synonyms":[{"name":"increased replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"increased replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"increased replication fork arrest at ribosomal DNA repeats","type":"exact"}],"termid":"FYPO:0003921"}


id: PBO:0047801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box J1","termid":"PBO:0047801"}


id: PBO:0083783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in maturation of 18S rRNA; depletion leads to inhibited pre-rRNA processing and reduced polysome levels; localizes primarily to the nucleolus","termid":"PBO:0083783"}


id: MONDO:0054723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 19","secondary_identifiers":["GARD:18403","OMIM:617592","UMLS:C4539818","MEDGEN:1614356","DOID:0070170"],"synonyms":[{"name":"SPGF19","type":"related"},{"name":"spermatogenic failure 19","type":"exact"}],"termid":"MONDO:0054723","xrefs":{"Monarch":{"xref_id":"0054723"}}}


id: GO:0098599
data:
  {"annotated_genes":["SJAG_00734","SJAG_03377","SJAG_02056","SJAG_02268","SJAG_00774"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61339,93318,69756,100738,79976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008474"}]},"cv_name":"molecular_function","definition":"Catalysis of a hydrolase reaction that removes a palmitoyl moiety from some substrate.","definition_xrefs":["GOC:pg","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00734":null,"SJAG_00774":null,"SJAG_02056":null,"SJAG_02268":null,"SJAG_03377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"palmitoyl hydrolase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5690046","Reactome:R-HSA-9027670"],"termid":"GO:0098599","terms_by_termid":{"GO:0008474":null}}


id: MONDO:0958206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 89","secondary_identifiers":["OMIM:620705","MEDGEN:1852501","DOID:0070588","UMLS:C5882752"],"termid":"MONDO:0958206","xrefs":{"Monarch":{"xref_id":"0958206"}}}


id: PBO:0050151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 7","termid":"PBO:0050151"}


id: PBO:0017964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase Mtd1 (predicted)","termid":"PBO:0017964"}


id: GO:0071881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:signaling","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting adrenergic receptor signaling pathway","synonyms":[{"name":"adrenergic receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"adrenergic receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"inhibition of adenylate cyclase activity by adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by adrenergic receptor signalling pathway","type":"related"}],"termid":"GO:0071881"}


id: MONDO:0002439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete stress polycythemia (obsolete MONDO:0002439)","termid":"MONDO:0002439","xrefs":{"Monarch":{"xref_id":"0002439"}}}


id: PBO:0000613
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motor neurone disease","termid":"PBO:0000613"}


id: GO:0030553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide binding","termid":"GO:0030551"},{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cGMP binding","synonyms":[{"name":"3',5' cGMP binding","type":"exact"},{"name":"3',5'-cGMP binding","type":"exact"},{"name":"cyclic GMP binding","type":"exact"}],"termid":"GO:0030553"}


id: PATO:0000545
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000545 relative photosensitivity value (obsolete PATO:0000545)","termid":"PATO:0000545"}


id: FYPO:0003520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylselenocysteine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased cellular hercynylselenocysteine level","termid":"FYPO:0003523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular hercynylselenocysteine level during vegetative growth","synonyms":[{"name":"increased cellular hercynylselenocysteine level during mitotic cell cycle","type":"related"},{"name":"increased hercynylselenocysteine level during vegetative growth","type":"exact"}],"termid":"FYPO:0003520"}


id: GO:0044673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer which catalyses the reaction of 5-amino-6-(D-ribitylamino)uracil and 4-hydroxyphenylpyruvate to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO), an intermediate of coenzyme F420.","definition_xrefs":["GOC:mengo_curators","PMID:14593448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase complex","synonyms":[{"name":"FO-synthase complex","type":"exact"}],"termid":"GO:0044673"}


id: PBO:0072682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and FYVE domain containing 3","termid":"PBO:0072682"}


id: FYPO:0001501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to brefeldin A. Cells stop growing (and may die) at a concentration of brefeldin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to brefeldin A","synonyms":[{"name":"hypersensitive to brefeldin A","type":"exact"},{"name":"sensitive to BFA","type":"exact"},{"name":"sensitive to brefeldin A during mitotic cell cycle","type":"related"},{"name":"sensitive to brefeldin A during vegetative growth","type":"exact"}],"termid":"FYPO:0001501"}


id: GO:0003221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the right cardiac ventricle muscle are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue morphogenesis","termid":"GO:0055010"},{"relation_name":"part_of","term_name":"cardiac right ventricle morphogenesis","termid":"GO:0003215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right ventricular cardiac muscle tissue morphogenesis","synonyms":[{"name":"right ventricle myocardium morphogenesis","type":"exact"}],"termid":"GO:0003221"}


id: MONDO:0012486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preauricular tag, isolated, autosomal dominant, 1","secondary_identifiers":["OMIM:610420","MEDGEN:369878","UMLS:C1968893","MESH:C566904"],"synonyms":[{"name":"preauricular Tag, isolated, autosomal dominant, type 1","type":"exact"},{"name":"preauricular tag, isolated, autosomal dominant, 1","type":"exact"}],"termid":"MONDO:0012486","xrefs":{"Monarch":{"xref_id":"0012486"}}}


id: PR:O13685
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 N that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02194","PANTHER:PTHR24067:SF30","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.04c","secondary_identifiers":["UniProtKB:O13685"],"synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2N","type":"exact"},{"name":"ubiquitin carrier protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13685"}


id: GO:1903928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyanide stimulus.","definition_xrefs":["GO_REF:0000071","PMID:21854848","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to cyanide","termid":"GO:1903927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cyanide","termid":"GO:1903928"}


id: PBO:0061233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP10 ribonucleoprotein","termid":"PBO:0061233"}


id: GO:0050417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-glutamine = NH3 + L-glutamate; and H2O + L-asparagine = NH3 + L-aspartate.","definition_xrefs":["EC:3.5.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"glutamin-(asparagin-)ase activity","synonyms":[{"name":"L-ASNase/L-GLNase activity","type":"related"},{"name":"L-asparagine/L-glutamine amidohydrolase activity","type":"related"},{"name":"L-glutamine(L-asparagine) amidohydrolase activity","type":"related"},{"name":"glutaminase-(asparagin-)ase activity","type":"exact"},{"name":"glutaminase-asparaginase activity","type":"related"}],"termid":"GO:0050417"}


id: FYPO:0001692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to purvalanol A. Cells stop growing (and may die) at a concentration of purvalanol A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to purvalanol A","synonyms":[{"name":"hypersensitive to purvalanol A","type":"exact"},{"name":"sensitive to purvalanol A during mitotic cell cycle","type":"related"},{"name":"sensitive to purvalanol A during vegetative growth","type":"exact"}],"termid":"FYPO:0001692"}


id: PBO:0035948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_mating_type_locus_during_vegetative_growth","termid":"PBO:0035948"}


id: PBO:0114215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage factor complex RNA-binding subunit Msi2","termid":"PBO:0114215"}


id: GO:0044188
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the host cell lysosome and separating its contents from the host cell cytoplasm.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell lysosome","termid":"GO:0044187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell lysosomal membrane","termid":"GO:0044188"}


id: MONDO:0007751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypercholesterolemia","termid":"MONDO:0005439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"hypercholesterolemia, autosomal dominant, type B","secondary_identifiers":["OMIM:144010","SCTID:238081000","MEDGEN:309962","UMLS:C1704417","GARD:8588"],"synonyms":[{"name":"apolipoprotein B-100, familial defective","type":"related"},{"name":"apolipoprotein B-100, familial ligand-defective","type":"related"},{"name":"hypercholesterolemia, autosomal dominant, type B","type":"exact"},{"name":"hypercholesterolemia, familial, 2","type":"exact"},{"name":"hypercholesterolemia, familial, due to ligand-defective apolipoprotein B","type":"related"}],"termid":"MONDO:0007751","xrefs":{"Monarch":{"xref_id":"0007751"}}}


id: GO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin.","definition_xrefs":["GOC:sm","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external biotic stimulus","termid":"GO:0043207"},{"relation_name":"part_of","term_name":"response to bacterium","termid":"GO:0009617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to molecule of bacterial origin","synonyms":[{"name":"response to bacteria associated molecule","type":"exact"},{"name":"response to bacterial associated molecule","type":"exact"},{"name":"response to bacterium associated molecule","type":"exact"}],"termid":"GO:0002237"}


id: GO:1905637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial mRNA catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27122350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial RNA catabolic process","termid":"GO:0000960"},{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"},{"relation_name":"regulates","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"regulation of mitochondrial mRNA catabolic process","termid":"GO:1905637"}


id: PBO:0039362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autocrine motility factor receptor","termid":"PBO:0039362"}


id: PBO:0069528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 797, pseudogene","termid":"PBO:0069528"}


id: PBO:0031583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_leucine","termid":"PBO:0031583"}


id: SO:1001251
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by sequence similarity data.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"supported_by_sequence_similarity","termid":"SO:0000907"},{"relation_name":"is_a","term_name":"CDS_predicted","termid":"SO:1001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_sequence_similarity_data","synonyms":[{"name":"CDS supported by sequence similarity data","type":"exact"}],"termid":"SO:1001251"}


id: PBO:0078932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 2-1","termid":"PBO:0078932"}


id: FYPO:0004757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the initiation of DNA-dependent DNA replication is abnormal. May result in re-replication of all or part of the genome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of DNA replication initiation","termid":"FYPO:0004756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal negative regulation of DNA replication initiation","synonyms":[{"name":"DNA re-replication","type":"related"},{"name":"DNA replication defects, endoreduplication","type":"related"},{"name":"DNA rereplication","type":"related"},{"name":"abnormal negative regulation of DNA-dependent DNA replication initiation","type":"exact"}],"termid":"FYPO:0004757"}


id: GO:0030567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Increases the rate of proteolysis catalyzed by thrombin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete thrombin activator activity (obsolete GO:0030567)","synonyms":[{"name":"prothrombin activator activity","type":"related"},{"name":"thrombin activator activity","type":"exact"}],"termid":"GO:0030567"}


id: MONDO:0019173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rabies is a viral zoonosis leading to a fatal encephalopathy if not treated.","definition_xrefs":["Orphanet:770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabies","secondary_identifiers":["ICD10CM:A82","MedDRA:10037742","GARD:7516","ICD9:071","NORD:1644","DOID:11260","NCIT:C28182","MEDGEN:48308","UMLS:C0034494","MESH:D011818","SCTID:14168008","icd11.foundation:854762584"],"synonyms":[{"name":"lyssa","type":"exact"}],"termid":"MONDO:0019173","xrefs":{"Monarch":{"xref_id":"0019173"}}}


id: GO:1900157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bone mineralization involved in bone maturation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone mineralization","termid":"GO:0030500"},{"relation_name":"regulates","term_name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bone mineralization involved in bone maturation","termid":"GO:1900157"}


id: PBO:0066764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 62","termid":"PBO:0066764"}


id: PBO:0041576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C21orf62 antisense RNA 1","termid":"PBO:0041576"}


id: GO:0010005
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Arrays of microtubules underlying and connected to the plasma membrane, in the cortical cytosol, oriented mainly with their axes transverse to the long axis of the cell (and root in plants). In plants it influences the direction of cellulose microfibril deposition.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical microtubule","termid":"GO:0055028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"cortical microtubule, transverse to long axis","termid":"GO:0010005"}


id: MONDO:0003229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphedema (obsolete MONDO:0003229)","termid":"MONDO:0003229","xrefs":{"Monarch":{"xref_id":"0003229"}}}


id: PBO:0085845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; null mutation suppresses cdc13-1 temperature sensitivity","termid":"PBO:0085845"}


id: FYPO:0002616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to pre-autophagosomal structure","termid":"FYPO:0002614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to pre-autophagosomal structure","synonyms":[{"name":"increased protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"increased protein localization to PAS","type":"exact"},{"name":"increased protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"increased protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002616"}


id: GO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type IIb hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIb hypersensitivity","termid":"GO:0001799"},{"relation_name":"is_a","term_name":"positive regulation of type II hypersensitivity","termid":"GO:0002894"},{"relation_name":"positively_regulates","term_name":"type IIb hypersensitivity","termid":"GO:0001795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type IIb hypersensitivity","synonyms":[{"name":"activation of type IIb hypersensitivity","type":"narrow"},{"name":"stimulation of type IIb hypersensitivity","type":"narrow"},{"name":"up regulation of type IIb hypersensitivity","type":"exact"},{"name":"up-regulation of type IIb hypersensitivity","type":"exact"},{"name":"upregulation of type IIb hypersensitivity","type":"exact"}],"termid":"GO:0001801"}


id: MONDO:0007487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyslexia, susceptibility to, 1","secondary_identifiers":["MEDGEN:338828","OMIM:127700","UMLS:C1851967"],"synonyms":[{"name":"DYX1","type":"related"},{"name":"Word-blindness, congenital","type":"related"},{"name":"dyslexia, susceptibility to, 1","type":"exact"},{"name":"dyslexia, susceptibility to, 4","type":"related"},{"name":"dyslexia, susceptibility to, 7","type":"related"},{"name":"dyslexia, susceptibility to, type 1","type":"exact"},{"name":"reading disability, specific, 1","type":"related"},{"name":"susceptibility to dyslexia 1","type":"related"}],"termid":"MONDO:0007487","xrefs":{"Monarch":{"xref_id":"0007487"}}}


id: PBO:0090654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor, Elf1 family","termid":"PBO:0090654"}


id: GO:0035185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The first nine mitotic division cycles of the insect embryo, during which the dividing nuclei lie deep in the interior of the egg and divide nearly synchronously. This is the first phase of the syncytial period where nuclei divide in a common cytoplasm without cytokinesis.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle comprising mitosis without cytokinesis","termid":"GO:0033301"},{"relation_name":"is_a","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}


id: PBO:0068155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 462","termid":"PBO:0068155"}


id: GO:0009868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by jasmonic acid involved in jasmonic acid/ethylene (ethene) dependent systemic resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"jasmonic acid mediated signaling pathway","termid":"GO:0009867"},{"relation_name":"part_of","term_name":"response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance","termid":"GO:0032260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway","synonyms":[{"name":"jasmonic acid and ethene-dependent systemic resistance, jasmonic acid mediated signaling pathway","type":"exact"},{"name":"jasmonic acid mediated signaling pathway (jasmonic acid/ethene-dependent systemic resistance)","type":"exact"},{"name":"jasmonic acid mediated signaling pathway (jasmonic acid/ethylene-dependent systemic resistance)","type":"exact"},{"name":"jasmonic acid/ethene-dependent systemic resistance, jasmonic acid mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethene-dependent systemic resistance, jasmonic acid mediated signalling pathway","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance, jasmonic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0009868"}


id: PBO:0041060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 9 pseudogene 2","termid":"PBO:0041060"}


id: PBO:0069682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 959, pseudogene","termid":"PBO:0069682"}


id: GO:1901470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of syringal lignin catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of syringal lignin catabolic process","termid":"GO:1901469"},{"relation_name":"negatively_regulates","term_name":"syringal lignin catabolic process","termid":"GO:1901065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of syringal lignin catabolic process","synonyms":[{"name":"down regulation of S-lignin catabolic process","type":"exact"},{"name":"down regulation of syringal lignin breakdown","type":"exact"},{"name":"down regulation of syringal lignin catabolic process","type":"exact"},{"name":"down regulation of syringal lignin catabolism","type":"exact"},{"name":"down regulation of syringal lignin degradation","type":"exact"},{"name":"down-regulation of S-lignin catabolic process","type":"exact"},{"name":"down-regulation of syringal lignin breakdown","type":"exact"},{"name":"down-regulation of syringal lignin catabolic process","type":"exact"},{"name":"down-regulation of syringal lignin catabolism","type":"exact"},{"name":"down-regulation of syringal lignin degradation","type":"exact"},{"name":"downregulation of S-lignin catabolic process","type":"exact"},{"name":"downregulation of syringal lignin breakdown","type":"exact"},{"name":"downregulation of syringal lignin catabolic process","type":"exact"},{"name":"downregulation of syringal lignin catabolism","type":"exact"},{"name":"downregulation of syringal lignin degradation","type":"exact"},{"name":"inhibition of S-lignin catabolic process","type":"exact"},{"name":"inhibition of syringal lignin breakdown","type":"exact"},{"name":"inhibition of syringal lignin catabolic process","type":"narrow"},{"name":"inhibition of syringal lignin catabolism","type":"exact"},{"name":"inhibition of syringal lignin degradation","type":"exact"},{"name":"negative regulation of S-lignin catabolic process","type":"exact"},{"name":"negative regulation of syringal lignin breakdown","type":"exact"},{"name":"negative regulation of syringal lignin catabolism","type":"exact"},{"name":"negative regulation of syringal lignin degradation","type":"exact"}],"termid":"GO:1901470"}


id: GO:0005298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: proline(out) + Na+(out) = proline(in) + Na+(in).","definition_xrefs":["TC:2.A.22.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"proline:sodium symporter activity","secondary_identifiers":["RHEA:28967","MetaCyc:TRANS-RXN-118","Reactome:R-HSA-444100"],"synonyms":[{"name":"sodium/proline symporter activity","type":"exact"}],"termid":"GO:0005298"}


id: PBO:0016998
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CAT5","termid":"PBO:0016998"}


id: PBO:0068254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 1","termid":"PBO:0068254"}


id: MONDO:0007846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"KBG syndrome is a rare condition characterized by a typical facial dysmorphism, macrodontia of the upper central incisors, skeletal (mainly costovertebral) anomalies and developmental delay.","definition_xrefs":["Orphanet:2332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"KBG syndrome","secondary_identifiers":["SCTID:711156009","UMLS:C0220687","ICD9:759.89","MEDGEN:66317","NORD:1322","DOID:14780","GARD:82","icd11.foundation:465550090","MESH:C537015","OMIM:148050"],"synonyms":[{"name":"KBG syndrome","type":"exact"},{"name":"KBGS","type":"related"},{"name":"macrodontia, intellectual disability, characteristic facies, short stature, and skeletal anomalies","type":"related"},{"name":"macrodontia, mental retardation, characteristic facies, short stature, and skeletal anomalies","type":"related"},{"name":"short stature, characteristic facies, macrodontia, intellectual disability, and skeletal anomalies","type":"related"},{"name":"short stature, characteristic facies, macrodontia, mental retardation, and skeletal anomalies","type":"related"},{"name":"short stature-facial and skeletal anomalies-intellectual disability-macrodontia syndrome","type":"exact"}],"termid":"MONDO:0007846","xrefs":{"Monarch":{"xref_id":"0007846"}}}


id: GO:0072478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether the spindle is correctly assembled, and chromosomes are attached to the spindle, is received and converted into a molecular signal, contributing to a mitotic cell cycle spindle assembly checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in mitotic spindle assembly checkpoint (obsolete GO:0072478)","synonyms":[{"name":"detection of stimulus involved in Dma1-dependent checkpoint","type":"narrow"},{"name":"detection of stimulus involved in SAC-independent checkpoint","type":"exact"},{"name":"detection of stimulus involved in mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"mitotic cell cycle spindle assembly checkpoint sensor mechanism","type":"related"},{"name":"mitotic cell cycle spindle assembly checkpoint sensor process","type":"related"},{"name":"perception of stimulus involved in DMA1-dependent checkpoint","type":"related"},{"name":"perception of stimulus involved in SAC-independent checkpoint","type":"related"},{"name":"sensing involved in mitotic cell cycle spindle assembly checkpoint","type":"related"},{"name":"stimulus detection involved in DMA1-dependent checkpoint","type":"narrow"},{"name":"stimulus detection involved in SAC-independent checkpoint","type":"exact"},{"name":"stimulus sensing involved in DMA1-dependent checkpoint","type":"related"},{"name":"stimulus sensing involved in SAC-independent checkpoint","type":"related"}],"termid":"GO:0072478"}


id: PBO:0045131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 1","termid":"PBO:0045131"}


id: MONDO:0010511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bilateral absence of vas deferens","termid":"MONDO:0018801"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vas deferens, congenital bilateral aplasia of, X-linked","secondary_identifiers":["MEDGEN:934782","DOID:0111863","GARD:15279","UMLS:C4310815","OMIM:300985"],"synonyms":[{"name":"CBAVDX","type":"exact"},{"name":"congenital bilateral absence of vas deferens, X-linked","type":"exact"},{"name":"vas deferens, congenital bilateral aplasia of, X-linked","type":"exact"},{"name":"vas deferens, congenital bilateral aplasia of, X-linked; CBAVDX","type":"exact"}],"termid":"MONDO:0010511","xrefs":{"Monarch":{"xref_id":"0010511"}}}


id: MONDO:0011636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 2","secondary_identifiers":["GARD:8283","MESH:C536130","DOID:0111885","UMLS:C1853666","OMIM:606129","MEDGEN:344104"],"synonyms":[{"name":"DBA2","type":"related"},{"name":"Diamond-Blackfan Anemia, 2","type":"related"},{"name":"Diamond-Blackfan anemia 2","type":"exact"},{"name":"anaemia Diamond-Blackfan 2","type":"related"},{"name":"anemia Diamond-Blackfan 2","type":"related"}],"termid":"MONDO:0011636","xrefs":{"Monarch":{"xref_id":"0011636"}}}


id: GO:1900139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of arachidonic acid secretion.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of icosanoid secretion","termid":"GO:0032304"},{"relation_name":"is_a","term_name":"regulation of arachidonate secretion","termid":"GO:0090237"},{"relation_name":"negatively_regulates","term_name":"arachidonate secretion","termid":"GO:0050482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of arachidonate secretion","synonyms":[{"name":"down regulation of arachidonic acid secretion","type":"exact"},{"name":"down-regulation of arachidonic acid secretion","type":"exact"},{"name":"downregulation of arachidonic acid secretion","type":"exact"},{"name":"inhibition of arachidonic acid secretion","type":"narrow"},{"name":"negative regulation of arachidonic acid secretion","type":"exact"}],"termid":"GO:1900139"}


id: SOFP:description
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Free-text description of feature","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"description","termid":"SOFP:description"}


id: GO:0009562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an embryo sac nucleus to the pole or center of the cell.","definition_xrefs":["GOC:jl","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"embryo sac nuclear migration","synonyms":[{"name":"embryo sac nucleus migration","type":"exact"},{"name":"female gametophyte nuclear migration","type":"exact"},{"name":"female gametophyte nucleus migration","type":"exact"},{"name":"megagametophyte nuclear migration","type":"exact"},{"name":"megagametophyte nucleus migration","type":"exact"}],"termid":"GO:0009562"}


id: PBO:0082925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome oxidase assembly factor; null mutation results in respiratory deficiency with specific loss of cytochrome oxidase activity; functions downstream of assembly factors Mss51p and Coa1p and interacts with assembly factor Shy1p","termid":"PBO:0082925"}


id: PBO:0064114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting pseudogene 1","termid":"PBO:0064114"}


id: PBO:0080184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDAC2 pseudogene 5","termid":"PBO:0080184"}


id: MONDO:0850064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited hematologic cancer-predisposing syndrome","secondary_identifiers":["Orphanet:619340","UMLS:C5681832","MEDGEN:1842853","GARD:22461"],"termid":"MONDO:0850064","xrefs":{"Monarch":{"xref_id":"0850064"}}}


id: GO:0032701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-18 production.","definition_xrefs":["PMID:23710316","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-18 production","termid":"GO:0032661"},{"relation_name":"negatively_regulates","term_name":"interleukin-18 production","termid":"GO:0032621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-18 production","secondary_identifiers":["GO:0045382","GO:0150121"],"synonyms":[{"name":"down regulation of interleukin-18 production","type":"exact"},{"name":"down-regulation of interleukin-18 production","type":"exact"},{"name":"downregulation of interleukin-18 production","type":"exact"},{"name":"inhibition of interleukin-18 production","type":"narrow"},{"name":"negative regulation of IL-18 production","type":"exact"},{"name":"negative regulation of interleukin-18 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-18 secretion","type":"narrow"}],"termid":"GO:0032701"}


id: GO:0018920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glyphosate, a broad-spectrum herbicide also known by the trade name Roundup. It is a member of a broad class of compounds known as phosphonic acids, which contain a direct carbon-to-phosphorus (C-P) bond.","definition_xrefs":["UM-BBD_pathwayID:gly"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glyphosate metabolic process","synonyms":[{"name":"Roundup metabolic process","type":"exact"},{"name":"Roundup metabolism","type":"exact"},{"name":"glyphosate metabolism","type":"exact"}],"termid":"GO:0018920"}


id: PBO:0004601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp16 (predicted)","termid":"PBO:0004601"}


id: PR:O94543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp1322 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C1322.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.03","synonyms":[{"name":"Spom972h-trp1322","type":"exact"}],"termid":"PR:O94543"}


id: GO:0048752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the semicircular canals are generated and organized.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"semicircular canal development","termid":"GO:0060872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal morphogenesis","synonyms":[{"name":"embryonic semicircular canal morphogenesis","type":"exact"}],"termid":"GO:0048752"}


id: GO:0006523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alanine, 2-aminopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"alanine biosynthetic process","synonyms":[{"name":"alanine anabolism","type":"exact"},{"name":"alanine biosynthesis","type":"exact"},{"name":"alanine formation","type":"exact"},{"name":"alanine synthesis","type":"exact"}],"termid":"GO:0006523"}


id: PBO:0053412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 349","termid":"PBO:0053412"}


id: PBO:0091139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein","termid":"PBO:0091139"}


id: PBO:0040531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-N-acetylgalactosaminyltransferase 1 pseudogene 1","termid":"PBO:0040531"}


id: MONDO:0006553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic skin disease most common in women aged 13-35 years.It is characterized by the development of intense itching in the underarm area, the pubic area, and around the nipple of the breast as a result of perspiration which becomes trapped in the sweat gland and surrounding areas. The cause is unknown, but heat, humidity, and stress may play a role. Treatment may include the use of retinoids, antibiotics, and immunosuppressants.","direct_ancestors":[{"relation_name":"is_a","term_name":"sweat gland disorder","termid":"MONDO:0006615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Fox-Fordyce disease","secondary_identifiers":["ICD9:705.82","SCTID:65038009","UMLS:C0016632","ICD10CM:L75.2","Wikipedia:Fox-Fordyce_disease","NCIT:C84716","MEDGEN:42092","DOID:1381","MESH:D005588"],"synonyms":[{"name":"Fox Fordyce disease","type":"exact"},{"name":"Fox-Fordyce disease","type":"exact"},{"name":"Fox-Fordyce syndrome","type":"related"},{"name":"apocrine miliaria","type":"related"},{"name":"miliaria, apocrine","type":"related"}],"termid":"MONDO:0006553","xrefs":{"Monarch":{"xref_id":"0006553"}}}


id: MONDO:0004276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm derived from ceruminous glands in the external auditory canal. It presents as a gray mass covered by skin. It is characterized by a proliferation of glands composed of cells with abundant eosinophilic and granular cytoplasm.","definition_xrefs":["NCIT:C6088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apocrine adenoma","termid":"MONDO:0002804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ceruminoma","secondary_identifiers":["SCTID:403945001","MEDGEN:569651","DOID:7549","UMLS:C0334352","ICDO:8420/0"],"synonyms":[{"name":"adenoma, ceruminous gland, benign","type":"exact"},{"name":"ceruminous adenoma","type":"exact"},{"name":"ceruminous adenoma (morphologic abnormality)","type":"exact"},{"name":"ceruminous adenoma of external auditory canal","type":"exact"},{"name":"ceruminous adenoma of the external auditory canal","type":"exact"},{"name":"external auditory canal ceruminous adenoma","type":"exact"}],"termid":"MONDO:0004276","xrefs":{"Monarch":{"xref_id":"0004276"}}}


id: GO:1901189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ephrin receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of ephrin receptor signaling pathway","termid":"GO:1901187"},{"relation_name":"positively_regulates","term_name":"ephrin receptor signaling pathway","termid":"GO:0048013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ephrin receptor signaling pathway","synonyms":[{"name":"activation of Eph receptor signaling pathway","type":"exact"},{"name":"activation of Eph receptor signalling pathway","type":"exact"},{"name":"activation of ephrin receptor signaling pathway","type":"narrow"},{"name":"positive regulation of Eph receptor signaling pathway","type":"exact"},{"name":"positive regulation of Eph receptor signalling pathway","type":"exact"},{"name":"up regulation of Eph receptor signaling pathway","type":"exact"},{"name":"up regulation of Eph receptor signalling pathway","type":"exact"},{"name":"up regulation of ephrin receptor signaling pathway","type":"exact"},{"name":"up-regulation of Eph receptor signaling pathway","type":"exact"},{"name":"up-regulation of Eph receptor signalling pathway","type":"exact"},{"name":"up-regulation of ephrin receptor signaling pathway","type":"exact"},{"name":"upregulation of Eph receptor signaling pathway","type":"exact"},{"name":"upregulation of Eph receptor signalling pathway","type":"exact"},{"name":"upregulation of ephrin receptor signaling pathway","type":"exact"}],"termid":"GO:1901189"}


id: PBO:0082310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartyl protease secreted to periplasmic space of mating type a cell; helps cells monitor availability of mating partners; cleaves and inactivates alpha factor allowing cells to recover from alpha-factor-induced cell cycle arrest","termid":"PBO:0082310"}


id: GO:2000168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in neural tube closure.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in neural tube closure (obsolete GO:2000168)","termid":"GO:2000168"}


id: PBO:0051450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-37","termid":"PBO:0051450"}


id: PBO:0059506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded cytochrome c oxidase II","termid":"PBO:0059506"}


id: FYPO:0004876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) is decreased when the cell is subject to heat shock, at specific genes that are transcriptionally up-regulated during the heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin binding at heat-shock-inducible genes during cellular response to heat shock","synonyms":[{"name":"decreased chromatin binding at heat shock inducible genes during cellular response to heat shock","type":"exact"},{"name":"reduced chromatin binding at heat-shock-inducible genes during cellular response to heat shock","type":"exact"}],"termid":"FYPO:0004876"}


id: GO:0099186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of synapse","termid":"GO:0098918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of postsynapse","termid":"GO:0099186"}


id: PBO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein (predicted)","termid":"PBO:0001634"}


id: PBO:0113380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative kinase; suppressor of GTPase mutant; dosage-sensitive modulator of mitochondrial DNA (mtDNA) homeostasis; localizes to the mitochondrial matrix, and to the cytosol and clathrin-coated vesicles in HTP studies; similar to bovine rhodopsin kinase; may have a role in intracellular sterol transport","termid":"PBO:0113380"}


id: PBO:0036127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_movement_within_plasma_membrane","termid":"PBO:0036127"}


id: GO:0070667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of mast cell proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte proliferation","termid":"GO:0070664"},{"relation_name":"is_a","term_name":"regulation of mast cell proliferation","termid":"GO:0070666"},{"relation_name":"negatively_regulates","term_name":"mast cell proliferation","termid":"GO:0070662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell proliferation","synonyms":[{"name":"down regulation of mast cell proliferation","type":"exact"},{"name":"down-regulation of mast cell proliferation","type":"exact"},{"name":"downregulation of mast cell proliferation","type":"exact"},{"name":"inhibition of mast cell proliferation","type":"narrow"}],"termid":"GO:0070667"}


id: PBO:0108914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3 cohesin complex component","termid":"PBO:0108914"}


id: GO:0120114
data:
  {"annotated_genes":["SJAG_03210","SJAG_02295","SJAG_03894","SJAG_03547","SJAG_02279","SJAG_00531","SJAG_00322","SJAG_02469","SJAG_01870","SJAG_05009","SJAG_02304","SJAG_04405","SJAG_01634","SJAG_02377","SJAG_01547","SJAG_04214","SJAG_00058","SJAG_03469","SJAG_05195","SJAG_04911","SJAG_01008","SJAG_03214","SJAG_01654","SJAG_01440","SJAG_04529","SJAG_04880","SJAG_02185","SJAG_00474","SJAG_00577","SJAG_00147","SJAG_03369","SJAG_05208","SJAG_01301","SJAG_03323","SJAG_05240","SJAG_03279","SJAG_02372","SJAG_00498","SJAG_00539","SJAG_02843","SJAG_04163","SJAG_01452","SJAG_00643","SJAG_04318","SJAG_00278","SJAG_00414","SJAG_03983","SJAG_00313","SJAG_02681","SJAG_04497","SJAG_04222","SJAG_04433","SJAG_03245","SJAG_00504","SJAG_00989","SJAG_04079","SJAG_03954","SJAG_01015","SJAG_03070","SJAG_01819","SJAG_04230","SJAG_03460","SJAG_01327","SJAG_01308","SJAG_02455","SJAG_01217","SJAG_04538","SJAG_05235","SJAG_03410","SJAG_03995"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95606,70451,78705,75632,108325,78596,112667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990726"},{"annotations":[116190,95607,106137,108326,112668,115655,114721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120115"},{"annotations":[73821,76816,89259,72510,75434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034715"},{"annotations":[111139,93493,91482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030532"},{"annotations":[95769,108780,101105,104349],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0032797"},{"annotations":[79176,76512,76817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034719"},{"annotations":[72507,76813,76616,106741,113066,72918,93796,73820,69839,75432,102505,76509,112158,79173,79349,70233,73865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005685"},{"annotations":[95613,80097,79174,102208,73034,112674,70149,75580,109860,76814,107682,109295,70234,102998,108331,77179,72508,77497,115659,73679,75433,73760,112446,116193,106142,114726,76510,75204,71939,75779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005686"},{"annotations":[70235,74871,72509,76511,79175,76815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005687"},{"annotations":[94972,63155,110420,105636,79836,70450,77133,75435,77270,78293,100432,70236,72511,78593,79038,114652,71289,109861,61883,97810,78130,105678,116195,108332,74033,76087,77246,110929,92912,77167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046540"},{"annotations":[75431,77132,95615,97196,102501,114728,117625,109862,72253,79172,112676,70232,72506,76812,76508,75962,78292,106144,106346,115661,116196,100433,108333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005682"},{"annotations":[77245,61882,79834,105291,71499,78592,78701,70449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005688"}]},"cv_name":"cellular_component","definition":"A protein complex containing members of the Like-Sm family of proteins, which includes both the Sm proteins and the Lsm proteins, and which generally form hexameric or heptameric ring structures which bind to RNA. While some of these ring complexes may form independently of RNA, many only form in association with their target RNA. In addition to Lsm-family proteins, many of these complexes contain additional protein members. Members of this family of complexes include the snRNPs which comprise the majority of the spliceosome. Others are involved in the 5' to 3' degradation pathways of mRNAs in the cytoplasm and of unspliced transcripts in the nucleus, as well as other diverse roles.","definition_xrefs":["PMID:27627834","GOC:krc","PMID:19121818","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":70,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00278":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00414":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00531":null,"SJAG_00539":null,"SJAG_00577":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01217":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01440":null,"SJAG_01452":null,"SJAG_01547":null,"SJAG_01634":null,"SJAG_01654":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02372":null,"SJAG_02377":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02681":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03214":null,"SJAG_03245":null,"SJAG_03279":null,"SJAG_03323":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03894":null,"SJAG_03954":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04079":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04318":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_04880":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05195":null,"SJAG_05208":null,"SJAG_05235":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Sm-like protein family complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0120114","terms_by_termid":{"GO:0005682":null,"GO:0005685":null,"GO:0005686":null,"GO:0005687":null,"GO:0005688":null,"GO:0030532":null,"GO:0032797":null,"GO:0034715":null,"GO:0034719":null,"GO:0046540":null,"GO:0120115":null,"GO:1990726":null}}


id: PBO:0000584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial leucine-tRNA ligase (predicted)","termid":"PBO:0000584"}


id: PBO:0004354
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.153","termid":"PBO:0004354"}


id: PBO:0066366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 10","termid":"PBO:0066366"}


id: PBO:0087211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; subunit of complex with Trm112p that methylates translation release factor Sup45p (eRF1) in the ternary complex eRF1-eRF3-GTP; similar to E.coli PrmC; member of the seven beta-strand family","termid":"PBO:0087211"}


id: PBO:0065983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1G","termid":"PBO:0065983"}


id: MONDO:0017109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated cerebellar vermis agenesis","termid":"MONDO:0017107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated partial cerebellar vermis agenesis","secondary_identifiers":["UMLS:C5680780","MEDGEN:1842645","Orphanet:269209","GARD:20992"],"termid":"MONDO:0017109","xrefs":{"Monarch":{"xref_id":"0017109"}}}


id: PBO:0069849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1135, pseudogene","termid":"PBO:0069849"}


id: MONDO:0017314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndrome type IV, also known as the vascular type of Ehlers-Danlos syndrome (EDS), is an inherited connective tissue disorder defined by characteristic facial features (acrogeria) in most patients, translucent skin with highly visible subcutaneous vessels on the trunk and lower back, easy bruising, and severe arterial, digestive and uterine complications, which are rarely, if at all, observed in the other forms of EDS.","definition_xrefs":["Orphanet:286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, vascular type","secondary_identifiers":["NCIT:C125699","SCTID:17025000","GARD:2082","MEDGEN:82790","NANDO:1200648","UMLS:C0268338","icd11.foundation:1202686415","NANDO:2201258"],"synonyms":[{"name":"EDS IV","type":"exact"},{"name":"EDS IV (formerly)","type":"related"},{"name":"EDS type 4","type":"exact"},{"name":"EDS type 4 (formerly)","type":"related"},{"name":"EDS4 (formerly)","type":"related"},{"name":"Ehlers Danlos syndrome, arterial type","type":"related"},{"name":"Ehlers Danlos syndrome, ecchymotic type","type":"related"},{"name":"Ehlers Danlos syndrome, sack-Barabas type","type":"related"},{"name":"Ehlers-Danlos syndrome type 4","type":"exact"},{"name":"Ehlers-Danlos syndrome type 4 (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome type IV","type":"exact"},{"name":"Ehlers-Danlos syndrome type IV (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, type IV","type":"exact"},{"name":"Ehlers-Danlos syndrome, vascular type","type":"exact"},{"name":"sack-Barabas syndrome","type":"exact"},{"name":"vEDS","type":"related"},{"name":"vascular EDS","type":"related"},{"name":"vascular Ehlers-Danlos syndrome","type":"related"}],"termid":"MONDO:0017314","xrefs":{"Monarch":{"xref_id":"0017314"}}}


id: GO:1903086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sinapate ester biosynthesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11080161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of sinapate ester biosynthetic process","termid":"GO:1903085"},{"relation_name":"negatively_regulates","term_name":"sinapate ester biosynthetic process","termid":"GO:0033525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sinapate ester biosynthetic process","synonyms":[{"name":"down regulation of sinapate ester anabolism","type":"exact"},{"name":"down regulation of sinapate ester biosynthesis","type":"exact"},{"name":"down regulation of sinapate ester biosynthetic process","type":"exact"},{"name":"down regulation of sinapate ester formation","type":"exact"},{"name":"down regulation of sinapate ester synthesis","type":"exact"},{"name":"down-regulation of sinapate ester anabolism","type":"exact"},{"name":"down-regulation of sinapate ester biosynthesis","type":"exact"},{"name":"down-regulation of sinapate ester biosynthetic process","type":"exact"},{"name":"down-regulation of sinapate ester formation","type":"exact"},{"name":"down-regulation of sinapate ester synthesis","type":"exact"},{"name":"downregulation of sinapate ester anabolism","type":"exact"},{"name":"downregulation of sinapate ester biosynthesis","type":"exact"},{"name":"downregulation of sinapate ester biosynthetic process","type":"exact"},{"name":"downregulation of sinapate ester formation","type":"exact"},{"name":"downregulation of sinapate ester synthesis","type":"exact"},{"name":"inhibition of sinapate ester anabolism","type":"narrow"},{"name":"inhibition of sinapate ester biosynthesis","type":"narrow"},{"name":"inhibition of sinapate ester biosynthetic process","type":"narrow"},{"name":"inhibition of sinapate ester formation","type":"narrow"},{"name":"inhibition of sinapate ester synthesis","type":"narrow"},{"name":"negative regulation of sinapate ester anabolism","type":"exact"},{"name":"negative regulation of sinapate ester biosynthesis","type":"exact"},{"name":"negative regulation of sinapate ester formation","type":"exact"},{"name":"negative regulation of sinapate ester synthesis","type":"exact"}],"termid":"GO:1903086"}


id: MONDO:0100524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of disorders that includes Farber disease and spinal muscular atrophy with progressive myoclonic epilepsy. Both disorders are caused by mutations in the ASAH1 gene that encodes the lysosomal hydrolase that breaks down the bioactive lipid, ceramide.","definition_xrefs":["PMID:30029679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"ASAH1-related sphingolipidosis","synonyms":[{"name":"acid ceramidase deficiency","type":"narrow"}],"termid":"MONDO:0100524","xrefs":{"Monarch":{"xref_id":"0100524"}}}


id: GO:0030247
data:
  {"annotated_genes":["SJAG_00981","SJAG_03535","SJAG_00667"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99955],"is_not":false,"summary":null,"term":"GO:0030247"},{"annotations":[60549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030248"},{"annotations":[118315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001065"}]},"cv_name":"molecular_function","definition":"Binding to a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate binding","termid":"GO:0030246"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_00981":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"polysaccharide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0002506"],"synonyms":[{"name":"polysaccharide assembly with MHC class II protein complex","type":"narrow"}],"termid":"GO:0030247","terms_by_termid":{"GO:0030247":null,"GO:0030248":null,"GO:2001065":null}}


id: PBO:0056085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 86","termid":"PBO:0056085"}


id: PBO:0002145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, SGT2 family (predicted)","termid":"PBO:0002145"}


id: PBO:0053569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 587","termid":"PBO:0053569"}


id: GO:0052717
data:
  {"annotated_genes":["SJAG_00352","SJAG_04189"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73522,100913],"is_not":false,"summary":null,"term":"GO:0052717"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine-34 + H2O = inosine-34 + NH3, in a tRNA-Ala molecule.","definition_xrefs":["RHEA:43168","PMID:17875641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA-specific adenosine deaminase activity","termid":"GO:0008251"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00352":null,"SJAG_04189":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"tRNA-specific adenosine-34 deaminase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.4.33"],"synonyms":[{"name":"tRNA(Ala)-A34 deaminase activity","type":"exact"}],"termid":"GO:0052717","terms_by_termid":{"GO:0052717":null}}


id: GO:0003831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminylglycopeptide.","definition_xrefs":["EC:2.4.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9035950","RHEA:22932","MetaCyc:2.4.1.38-RXN","Reactome:R-HSA-1912352","Reactome:R-HSA-2025723","Reactome:R-HSA-2046265","Reactome:R-HSA-9035949","Reactome:R-HSA-2046298","Reactome:R-HSA-975919","Reactome:R-HSA-3656230","Reactome:R-HSA-4793956"],"synonyms":[{"name":"GalT activity","type":"related"},{"name":"UDP-galactose--glycoprotein galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetyl-beta-D-glucosaminylglycopeptide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose-glycoprotein galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetyl-beta-D-glucosaminylglycopeptide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"beta-N-acetyl-beta-(1,4)-galactosyltransferase activity","type":"related"},{"name":"beta-N-acetyl-beta-1,4-galactosyltransferase activity","type":"related"},{"name":"glycoprotein 4-beta-galactosyl-transferase activity","type":"related"},{"name":"glycoprotein 4-beta-galactosyltransferase activity","type":"related"},{"name":"glycoprotein beta-galactosyltransferase activity","type":"related"},{"name":"thyroid galactosyltransferase activity","type":"narrow"},{"name":"thyroid glycoprotein beta-galactosyltransferase","type":"narrow"},{"name":"uridine diphosphogalactose-glycoprotein galactosyltransferase activity","type":"related"}],"termid":"GO:0003831"}


id: PBO:0002922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ski complex interacting GTPase (predicted)","termid":"PBO:0002922"}


id: PR:G2TRS5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC713.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C713.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.13","synonyms":[{"name":"Spom972h-SPBC713.13","type":"exact"}],"termid":"PR:G2TRS5"}


id: PBO:0076747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonic family member 2","termid":"PBO:0076747"}


id: PR:000045536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe) that is non-covalently bound to GDP.","definition_xrefs":["PMID:18422602","PomBase:MAH","PRO:CNA","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe)","termid":"PR:000045537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spi1/GDP+","pombase_gene_id":"SPBC1289.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding nuclear protein spi1, GDP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Ran-GDP","type":"broad"},{"name":"Spi1-GDP (Schizosaccharomyces pombe)","type":"exact"},{"name":"spi1/GDP+","type":"exact"}],"termid":"PR:000045536"}


id: MONDO:0002464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the lacrimal gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal system cancer","termid":"MONDO:0002460"},{"relation_name":"is_a","term_name":"lacrimal gland neoplasm","termid":"MONDO:0021222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"lacrimal gland cancer","secondary_identifiers":["ICD9:190.2","MEDGEN:56315","NCIT:C3563","SCTID:127004000","UMLS:C0153627","ICD9:239.89","DOID:294"],"synonyms":[{"name":"cancer of lacrimal gland","type":"exact"},{"name":"lacrimal gland cancer","type":"exact"},{"name":"malignant lacrimal gland neoplasm","type":"exact"},{"name":"malignant lacrimal gland tumor","type":"exact"},{"name":"malignant lacrimal gland tumour","type":"exact"},{"name":"malignant neoplasm of lacrimal gland","type":"exact"},{"name":"malignant neoplasm of the lacrimal gland","type":"exact"},{"name":"malignant tumor of lacrimal gland","type":"exact"},{"name":"malignant tumor of the lacrimal gland","type":"exact"},{"name":"malignant tumour of lacrimal gland","type":"exact"},{"name":"malignant tumour of the lacrimal gland","type":"exact"},{"name":"tumor of the lacrimal gland","type":"broad"},{"name":"tumour of the lacrimal gland","type":"broad"}],"termid":"MONDO:0002464","xrefs":{"Monarch":{"xref_id":"0002464"}}}


id: PATO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular placement quality inhering in a bearer by virtue of the bearer's placement at an angle that is greater than 180 degrees but less than 360 degrees to another entity.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reflex angle to","termid":"PATO:0001055"}


id: GO:0106261
data:
  {"annotated_genes":["SJAG_04756"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95259],"is_not":false,"summary":null,"term":"GO:0106261"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O + S-adenosyl-L-methionine + uridine(34) in tRNA = 5'-deoxyadenosine + carboxymethyluridine(34) in tRNA + CoA + 2 H+ + L-methionine.","definition_xrefs":["RHEA:61020","PMID:25151136","PMID:30733442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"tRNA uridine(34) acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.311"],"termid":"GO:0106261","terms_by_termid":{"GO:0106261":null}}


id: FYPO:0003291
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein does not contain galactose residues. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PomBase:mah","PMID:9125114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0003290","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"galactose absent from glycoprotein glycan","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"alpha 1,2-linked galactose residues absent from glycoprotein","type":"exact"},{"name":"galactose absent from glycoprotein oligosaccharide","type":"related"}],"termid":"FYPO:0003291","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: FYPO:0000073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caffeine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to caffeine","synonyms":[{"name":"resistance to caffeine during mitotic cell cycle","type":"related"},{"name":"resistance to caffeine during vegetative growth","type":"exact"},{"name":"resistant to caffeine","type":"exact"}],"termid":"FYPO:0000073"}


id: PBO:0030742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_morphology_during_nitrogen_starvation","termid":"PBO:0030742"}


id: SO:0001678
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element that is not part of the core promoter, but provides the promoter with a specific regulatory region.","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_promoter_element","synonyms":[{"name":"regulatory promoter element","type":"related"}],"termid":"SO:0001678"}


id: PBO:0052932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-4","termid":"PBO:0052932"}


id: PBO:0065517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypyrimidine tract binding protein 2","termid":"PBO:0065517"}


id: PBO:0057155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302a","termid":"PBO:0057155"}


id: PBO:0088964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Noc1","termid":"PBO:0088964"}


id: PBO:0072824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMM50 sorting and assembly machinery component","termid":"PBO:0072824"}


id: PBO:0064567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP4 homolog, ribonuclease P/MRP subunit","termid":"PBO:0064567"}


id: GO:0044416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host defense response (obsolete GO:0044416)","synonyms":[{"name":"activation by symbiont of host defense response","type":"exact"},{"name":"activation of host defense response","type":"exact"},{"name":"induction by organism of defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host defense response","type":"related"},{"name":"stimulation by symbiont of host defense response","type":"related"},{"name":"up regulation by symbiont of host defense response","type":"related"},{"name":"up-regulation by symbiont of host defense response","type":"related"},{"name":"upregulation by symbiont of host defense response","type":"related"}],"termid":"GO:0044416"}


id: GO:0060904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the protein folding process that takes place in the endoplasmic reticulum (ER). Secreted, plasma membrane and organelle proteins are folded in the ER, assisted by chaperones and foldases (protein disulphide isomerases), and additional factors required for optimal folding (ATP, Ca2+ and an oxidizing environment to allow disulfide bond formation).","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein folding","termid":"GO:1903332"},{"relation_name":"regulates","term_name":"protein folding in endoplasmic reticulum","termid":"GO:0034975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006457"],"is_obsolete":false,"name":"regulation of protein folding in endoplasmic reticulum","termid":"GO:0060904"}


id: MONDO:0015172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. This syndrome is characterized by the association of severe congenital colitis with sensorineural deafness.","definition_xrefs":["Orphanet:103912"],"gene_count":0,"genotype_count":0,"name":"obsolete epithelio-exfoliative colitis-deafness syndrome (obsolete MONDO:0015172)","termid":"MONDO:0015172","xrefs":{"Monarch":{"xref_id":"0015172"}}}


id: GO:0031035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly of a filament composed of myosin molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament organization","termid":"GO:0031033"},{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"myosin filament disassembly","synonyms":[{"name":"myosin depolymerization","type":"related"}],"termid":"GO:0031035"}


id: MONDO:0007953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare developmental anomaly, affecting primarily the anterior part of the maxilla and nasal complex.","definition_xrefs":["Orphanet:1248"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"nasal cavity disorder","termid":"MONDO:0002232"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Binder syndrome","secondary_identifiers":["MEDGEN:66318","DOID:14683","MESH:C536036","OMIM:155050","SCTID:715985008","UMLS:C0220692","GARD:6992"],"synonyms":[{"name":"Binder syndrome","type":"exact"},{"name":"MAXILLONASAL dysplasia, BINDER type","type":"related"},{"name":"Maxillonasal dysostosis","type":"exact"},{"name":"binder syndrome","type":"exact"},{"name":"binder type maxillonasal dysplasia","type":"exact"},{"name":"maxillonasal dysplasia","type":"related"}],"termid":"MONDO:0007953","xrefs":{"Monarch":{"xref_id":"0007953"}}}


id: GO:0102574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a 3-oxo-myristoyl-[acp] = 3-oxo-myristate + H+ + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-myristoyl-ACP hydrolase activity (obsolete GO:0102574)","termid":"GO:0102574"}


id: MONDO:1012555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve dysplasia, non-human animal","termid":"MONDO:1011652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitral valve dysplasia, domestic cat","secondary_identifiers":["OMIA:002521-9685"],"termid":"MONDO:1012555","xrefs":{"Monarch":{"xref_id":"1012555"}}}


id: GO:0061438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the renal system vasculature is generated and organized. Morphogenesis pertains to the creation of form.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:11891195","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"renal system vasculature development","termid":"GO:0061437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system vasculature morphogenesis","termid":"GO:0061438"}


id: MONDO:0014995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, seizures, and absent language","secondary_identifiers":["OMIM:617268","MEDGEN:934610","UMLS:C4310643"],"synonyms":[{"name":"NDHSAL","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia, seizures, and absent language","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia, seizures, and absent language; NDHSAL","type":"exact"}],"termid":"MONDO:0014995","xrefs":{"Monarch":{"xref_id":"0014995"}}}


id: GO:0000152
data:
  {"annotated_genes":["SJAG_02119","SJAG_01572","SJAG_05329","SJAG_05236","SJAG_00341","SJAG_03809","SJAG_03680","SJAG_03575","SJAG_02591","SJAG_00666","SJAG_03037","SJAG_00146","SJAG_03561","SJAG_03351","SJAG_01956","SJAG_02299","SJAG_03350","SJAG_01540","SJAG_03219","SJAG_00756","SJAG_02186","SJAG_04520","SJAG_02162","SJAG_02822","SJAG_04853","SJAG_05012","SJAG_04574","SJAG_03858","SJAG_00071","SJAG_01801","SJAG_04661","SJAG_02651"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57983,69957,112007,78884,77589,94955,73694,72790,70477,78057,78906,72926,78725,70511,76340,79788,79978,93544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005680"},{"annotations":[118602,94139,113770,117486,96517,110273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[110113,90394,94142,104664,97567,108870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"},{"annotations":[96480,91330,109757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033768"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex found in the nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00146":null,"SJAG_00341":null,"SJAG_00666":null,"SJAG_00756":null,"SJAG_01540":null,"SJAG_01572":null,"SJAG_01801":null,"SJAG_01956":null,"SJAG_02119":null,"SJAG_02162":null,"SJAG_02186":null,"SJAG_02299":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03037":null,"SJAG_03219":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03561":null,"SJAG_03575":null,"SJAG_03680":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04520":null,"SJAG_04574":null,"SJAG_04661":null,"SJAG_04853":null,"SJAG_05012":null,"SJAG_05236":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000152","terms_by_termid":{"GO:0005680":null,"GO:0033768":null,"GO:0043224":null,"GO:0043494":null}}


id: MONDO:0004281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eccrine porocarcinoma that arises from the sweat glands in the vulva.","definition_xrefs":["NCIT:C40306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar eccrine adenocarcinoma","termid":"MONDO:0003861"},{"relation_name":"is_a","term_name":"eccrine porocarcinoma","termid":"MONDO:0006189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"vulvar eccrine porocarcinoma","secondary_identifiers":["UMLS:C1520081","MEDGEN:275616","DOID:7565"],"synonyms":[{"name":"eccrine porocarcinoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva eccrine porocarcinoma","type":"exact"},{"name":"vulvar eccrine porocarcinoma","type":"exact"}],"termid":"MONDO:0004281","xrefs":{"Monarch":{"xref_id":"0004281"}}}


id: PATO:0000854
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000854 contact righting reflex value (obsolete PATO:0000854)","termid":"PATO:0000854"}


id: PATO:0001145
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001145 ig m concentration value (obsolete PATO:0001145)","termid":"PATO:0001145"}


id: PBO:0089878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-P subunit","termid":"PBO:0089878"}


id: GO:0034978
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the homeodomain proteins PDX1, PBX1b and MRG1 (MEIS2) and is involved in the transcriptional regulation of pancreatic acinar cell-specific genes.","definition_xrefs":["PMID:11279116","PMID:9710595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PDX1-PBX1b-MRG1 complex","synonyms":[{"name":"acinar cell-specific C complex","type":"exact"}],"termid":"GO:0034978"}


id: PBO:0077851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1 pseudogene 2","termid":"PBO:0077851"}


id: GO:0097043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 56 of the histone.","definition_xrefs":["GOC:bf","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K56 acetylation (obsolete GO:0097043)","termid":"GO:0097043"}


id: GO:0047815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinono-1,4-lactone + H2O = D-arabinonate + H+.","definition_xrefs":["RHEA:23108","EC:3.1.1.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"D-arabinonolactonase activity","secondary_identifiers":["KEGG_REACTION:R02714","MetaCyc:D-ARABINONOLACTONASE-RXN"],"synonyms":[{"name":"D-arabinono-1,4-lactone lactonohydrolase activity","type":"related"}],"termid":"GO:0047815"}


id: PBO:0056272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1A member 2 pseudogene 1","termid":"PBO:0056272"}


id: PBO:0054425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1821","termid":"PBO:0054425"}


id: PBO:0017944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe accessory factor Apc13","termid":"PBO:0017944"}


id: GO:0039603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Selective and non-covalent interaction of a viral protein with a member of the class of TATA-binding proteins (TBP) in the host, including any of the TBP-related factors (TRFs), which contributes to the viral-suppression of assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a host DNA template.","definition_xrefs":["PMID:11968006","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete TBP-class protein binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter (obsolete GO:0039603)","termid":"GO:0039603"}


id: GO:0004536
data:
  {"annotated_genes":["SJAG_05373","SJAG_01044","SJAG_03734","SJAG_01648","SJAG_01173","SJAG_00623","SJAG_01832","SJAG_04183","SJAG_02031","SJAG_01948","SJAG_01262","SJAG_02708","SJAG_05280","SJAG_02818","SJAG_04410","SJAG_02556","SJAG_01163","SJAG_03994","SJAG_03675","SJAG_05237","SJAG_04752","SJAG_02298","SJAG_00377","SJAG_02908","SJAG_02828"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990599"},{"annotations":[74923,75199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[74142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[105746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990043"},{"annotations":[103953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990601"},{"annotations":[71113,88183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[66078,75518,72443,74342,78220,71107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"},{"annotations":[100975,78348,59609,94530,78974,74137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008821"},{"annotations":[76721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[88339,72939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[96925,107554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[100977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106332"},{"annotations":[100945,74013,88342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[96927,72356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"},{"annotations":[109832,71580,110619,79085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000014"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activity","termid":"GO:0004518"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_00623":null,"SJAG_01044":null,"SJAG_01163":null,"SJAG_01173":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_01948":null,"SJAG_02031":null,"SJAG_02298":null,"SJAG_02556":null,"SJAG_02708":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02908":null,"SJAG_03675":null,"SJAG_03734":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_04410":null,"SJAG_04752":null,"SJAG_05237":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0140097","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"DNA nuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-211247","GO:0004537","Reactome:R-HSA-5685994","Reactome:R-HSA-6785986"],"synonyms":[{"name":"caspase-activated deoxyribonuclease activity","type":"narrow"},{"name":"deoxyribonuclease activity","type":"exact"}],"termid":"GO:0004536","terms_by_termid":{"GO:0000014":null,"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0008821":null,"GO:0017108":null,"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0048257":null,"GO:0051908":null,"GO:0106332":null,"GO:1990043":null,"GO:1990599":null,"GO:1990601":null}}


id: PBO:0069296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 552, pseudogene","termid":"PBO:0069296"}


id: FYPO:0005443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of hydrolysis of peptide bonds within a protein is decreased. All proteolysis may be affected, or only cleavage of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"},{"relation_name":"is_a","term_name":"decreased proteolysis","termid":"FYPO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased proteolysis during vegetative growth","synonyms":[{"name":"decreased peptidolysis during vegetative growth","type":"exact"},{"name":"decreased protein cleavage during vegetative growth","type":"related"},{"name":"decreased proteolysis during mitotic cell cycle","type":"related"},{"name":"reduced proteolysis during vegetative growth","type":"exact"}],"termid":"FYPO:0005443"}


id: GO:0007094
data:
  {"annotated_genes":["SJAG_03353","SJAG_01679","SJAG_01837","SJAG_04999","SJAG_04884","SJAG_01297","SJAG_01330","SJAG_04699","SJAG_03681","SJAG_04259","SJAG_01082","SJAG_04126","SJAG_03126","SJAG_02169","SJAG_02451","SJAG_00883","SJAG_02336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99236,101595,106118,109700,114291,115348],"is_not":false,"summary":null,"term":"GO:0007094"},{"annotations":[99392,114058,103686,90516,108049,107029,111752,115693,113570],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[93994],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[116467],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle checkpoint that delays mitotic sister chromatid separation and consequently the mitotic metaphase/anaphase transition until the spindle is correctly assembled and chromosomes are attached to the spindle. Spindle assembly checkpoint signaling begins with the activated Mph family kinase, and results in the inhibition of the Anaphase Promoting Complex and its activator Sleepy/Cdc20 by the mitotic checkpoint complex (MCC).","definition_xrefs":["GOC:mtg_cell_cycle","PMID:12360190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic metaphase/anaphase transition","termid":"GO:0045841"},{"relation_name":"is_a","term_name":"spindle assembly checkpoint signaling","termid":"GO:0071173"},{"relation_name":"is_a","term_name":"mitotic spindle checkpoint signaling","termid":"GO:0071174"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0044772","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"mitotic spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072480","GO:0044810","GO:1902420","Reactome:R-HSA-69618"],"synonyms":[{"name":"Dma1-dependent checkpoint","type":"narrow"},{"name":"Mad2-dependent checkpoint","type":"narrow"},{"name":"SAC-independent checkpoint","type":"narrow"},{"name":"mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"mitotic checkpoint","type":"exact"},{"name":"mitotic spindle assembly checkpoint","type":"exact"},{"name":"mitotic spindle assembly checkpoint signalling","type":"exact"},{"name":"signal transduction involved in Dma1-dependent checkpoint","type":"narrow"},{"name":"signal transduction involved in SAC-independent checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic spindle assembly checkpoint","type":"exact"},{"name":"signaling cascade involved in Dma1-dependent checkpoint","type":"narrow"},{"name":"signaling cascade involved in SAC-independent checkpoint","type":"narrow"},{"name":"signaling pathway involved in Dma1-dependent checkpoint","type":"related"},{"name":"signaling pathway involved in SAC-independent checkpoint","type":"related"},{"name":"signalling cascade involved in Dma1-dependent checkpoint","type":"narrow"},{"name":"signalling cascade involved in SAC-independent checkpoint","type":"narrow"},{"name":"signalling pathway involved in Dma1-dependent checkpoint","type":"related"},{"name":"signalling pathway involved in SAC-independent checkpoint","type":"related"}],"termid":"GO:0007094","terms_by_termid":{"GO:0007094":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: MONDO:0041536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe inflammatory disease that occurs sporadically and in outbreaks in Russia and Japan, caused by Yersinia pseudotubuclosis infection, an organism that typically causes self-limiting gastroenteritis in Europe.","definition_xrefs":["PMID:26819960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Yersinia pseudotuberculosis infectious disease","termid":"MONDO:0007024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Far-East scarlet-like fever","secondary_identifiers":["SCTID:47277009","UMLS:C0277513","MEDGEN:548219"],"synonyms":[{"name":"FESLF","type":"exact"},{"name":"Izumi fever","type":"exact"}],"termid":"MONDO:0041536","xrefs":{"Monarch":{"xref_id":"0041536"}}}


id: PBO:0069582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 856, pseudogene","termid":"PBO:0069582"}


id: PATO:0002142
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bracket","termid":"PATO:0002142"}


id: GO:0043219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Non-compact myelin located adjacent to the nodes of Ranvier in a myelin segment. These non-compact regions include cytoplasm from the cell responsible for synthesizing the myelin. Lateral loops are found in the paranodal region adjacent to the nodes of Ranvier, while Schmidt-Lantermann clefts are analogous structures found within the compact myelin internode.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myelin sheath","termid":"GO:0043209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral loop","secondary_identifiers":["NIF_Subcellular:sao1067215520","NIF_Subcellular:sao1354781919"],"synonyms":[{"name":"Schwann cell paranodal termination","type":"related"},{"name":"oligodendrocyte paranodal termination","type":"related"},{"name":"paranodal loop","type":"related"}],"termid":"GO:0043219"}


id: MONDO:0018424
data:
  {"annotated_genes":["SJAG_02007","SJAG_03222","SJAG_03701","SJAG_01164","SJAG_02306","SJAG_03641","SJAG_03290","SJAG_03553","SJAG_01417","SJAG_04016","SJAG_01147","SJAG_02397"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015003"},{"annotations":[86444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013762"},{"annotations":[85243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014576"},{"annotations":[84945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011582"},{"annotations":[85471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013675"},{"annotations":[85822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014132"},{"annotations":[85091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014611"},{"annotations":[85157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033282"},{"annotations":[85800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054785"},{"annotations":[86145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957382"},{"annotations":[85012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"},{"annotations":[85600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014803"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of lipoate biosynthetic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"inherited fatty acid metabolism disorder","termid":"MONDO:0037858"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"},{"relation_name":"is_a","term_name":"sulfur metabolism disease","termid":"MONDO:0056803"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01147":null,"SJAG_01164":null,"SJAG_01417":null,"SJAG_02007":null,"SJAG_02306":null,"SJAG_02397":null,"SJAG_03222":null,"SJAG_03290":null,"SJAG_03553":null,"SJAG_03641":null,"SJAG_03701":null,"SJAG_04016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"inherited lipoic acid biosynthesis defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843250","GARD:12679","UMLS:C5680006","Orphanet:401854"],"synonyms":[{"name":"inborn error of lipoate biosynthetic process","type":"exact"},{"name":"inborn lipoate biosynthetic process disorder","type":"exact"},{"name":"lipoate biosynthesis defect","type":"exact"},{"name":"lipoic acid biosynthesis defect","type":"related"},{"name":"lipoic acid biosynthesis defects","type":"related"},{"name":"rare inborn error of lipoate biosynthetic process","type":"exact"}],"termid":"MONDO:0018424","terms_by_termid":{"MONDO:0009529":null,"MONDO:0011582":null,"MONDO:0013675":null,"MONDO:0013762":null,"MONDO:0014132":null,"MONDO:0014576":null,"MONDO:0014611":null,"MONDO:0014803":null,"MONDO:0015003":null,"MONDO:0033282":null,"MONDO:0054785":null,"MONDO:0957382":null},"xrefs":{"Monarch":{"xref_id":"0018424"}}}


id: GO:2001053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process","synonyms":[{"name":"regulation of mesenchymal cell apoptosis","type":"narrow"}],"termid":"GO:2001053"}


id: GO:1990275
data:
  {"annotated_genes":["SJAG_04599"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70783],"is_not":false,"summary":null,"term":"GO:1990275"}]},"cv_name":"molecular_function","definition":"Binding to a preribosome.","definition_xrefs":["GOC:di","PMID:22735702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"preribosome binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990275","terms_by_termid":{"GO:1990275":null}}


id: PBO:0082368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic helix-loop-helix (bHLH) protein; forms homodimer to bind E-box consensus sequence CACGTG present at MET gene promoters and centromere DNA element I (CDEI); affects nucleosome positioning at this motif; associates with other transcription factors such as Met4p and Isw1p to mediate transcriptional activation or repression; associates with kinetochore proteins, required for chromosome segregation; protein abundance increases in response to DNA replication stress","termid":"PBO:0082368"}


id: PBO:0027596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mononucleate_multiseptate_vegetative_cell","termid":"PBO:0027596"}


id: GO:0010738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein kinase A signaling. PKA signaling is the series of reactions, mediated by the intracellular serine/threonine kinase protein kinase A, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"protein kinase A signaling","termid":"GO:0010737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of protein kinase A signaling","synonyms":[{"name":"regulation of PKA signaling cascade","type":"related"},{"name":"regulation of protein kinase A signaling cascade","type":"related"},{"name":"regulation of protein kinase A signalling cascade","type":"related"}],"termid":"GO:0010738"}


id: PBO:0061496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuritin 1","termid":"PBO:0061496"}


id: MONDO:0859318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 1","termid":"MONDO:0019161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism, type IB3, autosomal recessive","secondary_identifiers":["OMIM:620126","UMLS:C5774256","MEDGEN:1824029"],"termid":"MONDO:0859318","xrefs":{"Monarch":{"xref_id":"0859318"}}}


id: FYPO:0007440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the directed movement of sterols within cells is abnormal.","definition_xrefs":["PomBase:mah","GO:0032366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal intracellular sterol transport","synonyms":[{"name":"abnormal intracellular sterol transport during mitotic cell cycle","type":"related"},{"name":"abnormal intracellular sterol transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007440"}


id: PR:000044575
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rad9 gene Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"SPAC664.07c","type":"related"},{"name":"Spom-rad9","type":"exact"}],"termid":"PR:000044575"}


id: PBO:0053374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 299","termid":"PBO:0053374"}


id: PBO:0038421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOBEC1 complementation factor","termid":"PBO:0038421"}


id: PBO:0025501
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rrm-containing Cyclophilin regulating Transcription","termid":"PBO:0025501"}


id: MONDO:0033479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia 44","secondary_identifiers":["DOID:0080286","MEDGEN:1611168","OMIM:617691","Orphanet:631095","UMLS:C4521563"],"synonyms":[{"name":"SCA44","type":"related"},{"name":"spinocerebellar ataxia 44","type":"exact"}],"termid":"MONDO:0033479","xrefs":{"Monarch":{"xref_id":"0033479"}}}


id: PBO:0088995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II nuclear import protein Rtp1","termid":"PBO:0088995"}


id: PR:O13919
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A paired amphipathic helix protein Sin3b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00893","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired amphipathic helix protein pst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.15","secondary_identifiers":["UniProtKB:O13919"],"synonyms":[{"name":"SIN3 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SIN3B","type":"exact"}],"termid":"PR:O13919"}


id: PBO:0044962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 7B","termid":"PBO:0044962"}


id: GO:0033672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of NAD kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an NAD molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of NAD+ kinase activity (obsolete GO:0033672)","synonyms":[{"name":"NAD+ kinase activator","type":"narrow"},{"name":"stimulation of NAD+ kinase activity","type":"narrow"},{"name":"up regulation of NAD+ kinase activity","type":"exact"},{"name":"up-regulation of NAD+ kinase activity","type":"exact"},{"name":"upregulation of NAD+ kinase activity","type":"exact"}],"termid":"GO:0033672"}


id: MONDO:0000621
data:
  {"annotated_genes":["SJAG_05979","SJAG_01748","SJAG_02527","SJAG_01349","SJAG_03905","SJAG_01013","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87159,87005,87004,87003,87158,87006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[87125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the immune system","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_02527":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"immune system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060083"],"synonyms":[{"name":"cancer of immune system","type":"exact"},{"name":"immune system cancer","type":"exact"},{"name":"malignant immune system neoplasm","type":"exact"},{"name":"malignant neoplasm of immune system","type":"exact"}],"termid":"MONDO:0000621","terms_by_termid":{"MONDO:0009693":null,"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0000621"}}}


id: MONDO:0015174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune enteropathy","termid":"MONDO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"autoimmune enteropathy type 3","secondary_identifiers":["Orphanet:103917","icd11.foundation:1137579941"],"termid":"MONDO:0015174","xrefs":{"Monarch":{"xref_id":"0015174"}}}


id: MOD:00460
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively trioxygenates an L-cysteine residue to L-cysteine sulfonic acid.","definition_xrefs":["ChEBI:17285","PubMed:18306178","Unimod:345#C","DeltaMass:334","OMSSA:34","PubMed:14678012","PubMed:19522542","PubMed:9252331","RESID:AA0556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteic acid (L-cysteine sulfonic acid)","synonyms":[{"name":"(2R)-2-amino-3-sulfopropanoic acid","type":"exact"},{"name":"2-amino-2-carboxyethanesulfonic acid","type":"exact"},{"name":"2-azanyl-3-sulfopropanoic acid","type":"exact"},{"name":"3-sulfoalanine","type":"exact"},{"name":"Cya","type":"exact"},{"name":"CysO3H","type":"exact"},{"name":"Cysteic acid, oxidation of cysteine","type":"exact"},{"name":"L-cysteine sulfonic acid","type":"exact"},{"name":"MOD_RES Cysteine sulfonic acid (-SO3H)","type":"exact"},{"name":"Trioxidation","type":"related"},{"name":"cysteic acid","type":"exact"},{"name":"cysteicacidc","type":"exact"},{"name":"cysteine oxidation to cysteic acid","type":"related"},{"name":"cysteine sulphonic acid","type":"exact"}],"termid":"MOD:00460"}


id: GO:0009589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an ultraviolet radiation (UV light) stimulus is received and converted into a molecular signal. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers.","definition_xrefs":["GOC:dos","GOC:go_curators","ISBN:0198506732","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"},{"relation_name":"is_a","term_name":"detection of light stimulus","termid":"GO:0009583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of UV","synonyms":[{"name":"detection of UV light stimulus","type":"exact"},{"name":"detection of UV radiation stimulus","type":"exact"},{"name":"detection of ultraviolet light stimulus","type":"exact"},{"name":"detection of ultraviolet radiation stimulus","type":"exact"},{"name":"perception of UV","type":"related"}],"termid":"GO:0009589"}


id: GO:0045239
data:
  {"annotated_genes":["SJAG_03290","SJAG_02464","SJAG_03813","SJAG_06382","SJAG_01524","SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71470,70099,106534,64012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045252"},{"annotations":[71456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042709"},{"annotations":[75158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009361"}]},"cv_name":"cellular_component","definition":"Any of the heteromeric enzymes that act in the TCA cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_02464":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03813":null,"SJAG_06382":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"tricarboxylic acid cycle heteromeric enzyme complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TCA cycle enzyme complex","type":"exact"}],"termid":"GO:0045239","terms_by_termid":{"GO:0009361":null,"GO:0042709":null,"GO:0045252":null}}


id: GO:0001772
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction.","definition_xrefs":["GOC:mgi_curators","PMID:11244041","PMID:11376300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"immunological synapse","secondary_identifiers":["Wikipedia:Immunological_synapse"],"synonyms":[{"name":"c-SMAC","type":"narrow"},{"name":"supramolecular activation cluster","type":"exact"}],"termid":"GO:0001772"}


id: PBO:0077480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 200C","termid":"PBO:0077480"}


id: PBO:0046559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 1","termid":"PBO:0046559"}


id: PBO:0076961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta receptor 3 like","termid":"PBO:0076961"}


id: PBO:0050595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7","termid":"PBO:0050595"}


id: PR:Q9P7Q4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicle-fusing ATPase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23078:SF0","OMA:SCHPO01950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicular-fusion protein sec18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.11c","secondary_identifiers":["UniProtKB:Q9P7Q4"],"synonyms":[{"name":"Spom972h-NSF","type":"exact"}],"termid":"PR:Q9P7Q4"}


id: GO:0070558
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaM-beta2 integrin complex bound to membrane protein CD63, a member of the tetraspan family.","definition_xrefs":["PMID:8871662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaM-beta2 integrin-CD63 complex","synonyms":[{"name":"ITGAM-ITGB2-CD63 complex","type":"narrow"}],"termid":"GO:0070558"}


id: PBO:0034653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_maintenance_of_protein_localization_in_vacuole,_with_protein_secreted","termid":"PBO:0034653"}


id: PBO:0042019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 74B pseudogene 1","termid":"PBO:0042019"}


id: GO:1905335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aggrephagy.","definition_xrefs":["PMID:25686248","GOC:PARL","GOC:pad","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"regulates","term_name":"aggrephagy","termid":"GO:0035973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of aggrephagy","termid":"GO:1905335"}


id: PBO:0065411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 8","termid":"PBO:0065411"}


id: PBO:0049066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 83","termid":"PBO:0049066"}


id: PBO:0011465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF890 family protein, predicted methyltransferase","termid":"PBO:0011465"}


id: GO:1902296
data:
  {"annotated_genes":["SJAG_00863","SJAG_00729","SJAG_02908","SJAG_04190","SJAG_00272","SJAG_02667","SJAG_04879","SJAG_01823","SJAG_03495","SJAG_00874","SJAG_04877","SJAG_02182","SJAG_01010","SJAG_03780","SJAG_02818","SJAG_00814","SJAG_05197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70097,112067,112308,113357,115199,109737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[95029,104020,102621,117981,108903,104735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[95030,89362,104736,106784,104021,95061,93759,107147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"Any DNA strand elongation that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in DNA replication","termid":"GO:0006271"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_01010":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"DNA strand elongation involved in cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication elongation involved in cell cycle DNA replication","type":"exact"},{"name":"DNA strand elongation during DNA replication involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902296","terms_by_termid":{"GO:1902983":null,"GO:1903459":null,"GO:1903460":null}}


id: PBO:0065345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin like 2A pseudogene 2","termid":"PBO:0065345"}


id: PBO:0075722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorcin pseudogene 3","termid":"PBO:0075722"}


id: FYPO:0005844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000787"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone H3-K9 trimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 trimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 trimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me3 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished silent mating-type cassette histone H3-K9 trimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 trimethylation abolished at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0005844"}


id: GO:0023026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II major histocompatibility complex.","definition_xrefs":["GOC:mtg_signal","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex binding","termid":"GO:0023023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC class II protein complex binding","termid":"GO:0023026"}


id: PBO:0071735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 33","termid":"PBO:0071735"}


id: FYPO:0001878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable but is elongated and has an abnormally low thickness or diameter.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"viable thin vegetative cell","termid":"FYPO:0001877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"viable thin, elongated vegetative cell","synonyms":[{"name":"thin, elongated viable cell during vegetative growth","type":"exact"},{"name":"thin, elongated viable vegetative cell","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell diameter","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell thickness","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell width","type":"exact"},{"name":"viable thin, elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001878"}


id: MONDO:0021605
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the upper or lower eyelid.","definition_xrefs":["NCIT:C4354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid neoplasm","termid":"MONDO:0002235"},{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"benign eyelid neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:231824001","UMLS:C0339107","MEDGEN:137911"],"synonyms":[{"name":"benign eyelid neoplasm","type":"exact"},{"name":"benign eyelid tumor","type":"exact"},{"name":"benign eyelid tumour","type":"exact"},{"name":"benign neoplasm of eyelid","type":"exact"},{"name":"benign neoplasm of the eyelid","type":"exact"},{"name":"benign tumor of eyelid","type":"exact"},{"name":"benign tumor of the eyelid","type":"exact"},{"name":"benign tumour of eyelid","type":"exact"},{"name":"benign tumour of the eyelid","type":"exact"},{"name":"eyelid benign neoplasm","type":"exact"}],"termid":"MONDO:0021605","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0021605"}}}


id: PBO:0077784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase I pseudogene 2","termid":"PBO:0077784"}


id: GO:0019531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oxalate from one side of a membrane to the other. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"oxalate transmembrane transporter activity","synonyms":[{"name":"oxalic acid transporter activity","type":"exact"}],"termid":"GO:0019531"}


id: PBO:0038863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase RNA specific","termid":"PBO:0038863"}


id: MONDO:0020422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aortopulmonary coronary arterial course is a rare coronary artery congenital malformation characterized by anomalous origin of the coronary artery from the contralateral sinus of Valsalva with course between the aorta and the pulmonary artery. The anomaly is associated with increased risk of sudden cardiac death, especially during exercise.","definition_xrefs":["Orphanet:99086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortopulmonary coronary arterial course","secondary_identifiers":["MEDGEN:1668023","UMLS:C4757971"],"termid":"MONDO:0020422","xrefs":{"Monarch":{"xref_id":"0020422"}}}


id: GO:0140664
data:
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id: PBO:0017899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidyl-N-dimethylethanolamine N-methyltransferase","termid":"PBO:0017899"}


id: PBO:0073877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 5","termid":"PBO:0073877"}


id: GO:0071765
data:
  {"annotated_genes":["SJAG_03491","SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70359,91139],"is_not":false,"summary":null,"term":"GO:0071765"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear inner membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_03491":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"nuclear inner membrane organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear inner membrane organisation","type":"exact"},{"name":"nuclear inner membrane organization and biogenesis","type":"related"}],"termid":"GO:0071765","terms_by_termid":{"GO:0071765":null}}


id: SO:0000777
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non functional descendant of an rRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_transcript","termid":"SO:0000516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_rRNA","synonyms":[{"name":"INSDC_feature:rRNA","type":"broad"},{"name":"INSDC_qualifier:pseudo","type":"exact"},{"name":"pseudogenic rRNA","type":"exact"}],"termid":"SO:0000777"}


id: GO:0070013
data:
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{"annotated_genes":["SJAG_04671","SJAG_01010","SJAG_03602","SJAG_01873","SJAG_03073","SJAG_01118","SJAG_02771","SJAG_04287","SJAG_05373","SJAG_01076","SJAG_01084","SJAG_01456","SJAG_03160","SJAG_02074","SJAG_01837","SJAG_00600","SJAG_04394","SJAG_01901","SJAG_02342","SJAG_04469","SJAG_04597","SJAG_03126","SJAG_01044","SJAG_04280","SJAG_01605","SJAG_01146","SJAG_00216","SJAG_01429","SJAG_04655","SJAG_00883","SJAG_01680","SJAG_00526","SJAG_02332","SJAG_02592","SJAG_02576","SJAG_03067","SJAG_02098","SJAG_03486","SJAG_01855","SJAG_02858","SJAG_02723","SJAG_04486","SJAG_02266","SJAG_03695","SJAG_06592","SJAG_00214","SJAG_03942","SJAG_01205","SJAG_00364","SJAG_03026","SJAG_03927","SJAG_00640","SJAG_04140","SJAG_00117","SJAG_03309","SJAG_04332","SJAG_03048","SJAG_00082","SJAG_02392","SJAG_03592","SJAG_03854","SJAG_02563","SJAG_01000","SJAG_01311","SJAG_03529","SJAG_01805","SJAG_00256","SJAG_00318"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104100,77022,117808,106189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000086"},{"annotations":[106414,115851,91224],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033315"},{"annotations":[94202,101236,115797,89784,100339],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0044878"},{"annotations":[100340,109110,70879,93758,98994,106417,72022,99161,115853,74582,117071,116597,78651,79225,111827,91225,116898],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033314"},{"annotations":[94333,95642,98229,115799],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031569"},{"annotations":[91589,100851,116812,117508,90002,106418,88908,109111,100341,111522,75031,99163,79088,72020,91226],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0007095"},{"annotations":[100796,93015,108369,112271,78286,111229,114260,92722,104294,106449,106813,94162,111613,93365],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010972"},{"annotations":[70368,78290],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[91529,108371,110138,87846,91933,107032,98801,110995,116277,103285,94165,101555,87837,73344,70683,93598,116465,94204,98230],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010971"},{"annotations":[101186,87639],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905287"},{"annotations":[73349],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0110032"},{"annotations":[111758,71257],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010389"}]},"cv_name":"biological_process","definition":"The cell cycle process by which a cell in G2 phase commits to M phase.","definition_xrefs":["GOC:jl","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase 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cycle G2/M phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044839","terms_by_termid":{"GO:0000086":null,"GO:0007095":null,"GO:0010389":null,"GO:0010971":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0033315":null,"GO:0044878":null,"GO:0110031":null,"GO:0110032":null,"GO:1905287":null}}


id: FYPO:0007394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of one or more RNA molecules differs from normal.","definition_xrefs":["PomBase:mah","PMID:24793650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal RNA structure","synonyms":[{"name":"abnormal RNA secondary structure","type":"narrow"}],"termid":"FYPO:0007394"}


id: GO:1901388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transforming growth factor beta activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta activation (obsolete GO:1901388)","synonyms":[{"name":"regulation of L-TGF-beta activation","type":"exact"},{"name":"regulation of TGF-B activation","type":"exact"},{"name":"regulation of TGF-beta activation","type":"exact"},{"name":"regulation of TGFB activation","type":"exact"},{"name":"regulation of TGFbeta activation","type":"exact"},{"name":"regulation of latent TGF-beta activation","type":"exact"}],"termid":"GO:1901388"}


id: PBO:0086825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL050c is not an essential gene","termid":"PBO:0086825"}


id: PATO:0000352
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000352 metabolite composition value (obsolete PATO:0000352)","termid":"PATO:0000352"}


id: MOD:00681
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to a hydroxylated L-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated lysine","synonyms":[{"name":"HyLys","type":"exact"}],"termid":"MOD:00681"}


id: PBO:0071822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 17","termid":"PBO:0071822"}


id: PBO:0048579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 3 pseudogene","termid":"PBO:0048579"}


id: GO:0140099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process which begins with venom being forced into an organism by the bite or sting of another organism, and prevents fibrinolysis, the solubilization of fibrin in the bloodstream of a multicellular organism. Anti-fibrinolytic proteins reduce bleeding at the bite or sting site of the prey.","definition_xrefs":["PMID:19236611","PMID:27208884","PMID:35716829","PMID:22359676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"},{"relation_name":"is_a","term_name":"envenomation perturbing hemostasis","termid":"GO:0044483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation suppressing fibrinolysis in another organism","termid":"GO:0140099"}


id: PBO:0035858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0035858"}


id: PBO:0002633
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.46","termid":"PBO:0002633"}


id: PBO:0077832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p73","termid":"PBO:0077832"}


id: PBO:0051428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-7 (pseudogene)","termid":"PBO:0051428"}


id: MONDO:0007568
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86871,86872],"is_not":false,"summary":null,"term":"MONDO:0007568"}]},"cv_name":"mondo","definition":"Any familial thoracic aortic aneurysm and aortic dissection in which the cause of the disease is a mutation in the MYH11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1851504","MESH:C537784","MEDGEN:338704","OMIM:132900","GARD:9876"],"synonyms":[{"name":"AAT4","type":"related"},{"name":"FAA4","type":"related"},{"name":"MYH11 familial thoracic aortic aneurysm and aortic dissection","type":"exact"},{"name":"aortic aneurysm, familial thoracic 4","type":"exact"},{"name":"aortic aneurysm, familial thoracic type 4","type":"exact"},{"name":"aortic aneurysm/aortic dissection and patent ductus arteriosus","type":"related"},{"name":"familial thoracic aortic aneurysm and aortic dissection caused by mutation in MYH11","type":"exact"}],"termid":"MONDO:0007568","terms_by_termid":{"MONDO:0007568":null},"xrefs":{"Monarch":{"xref_id":"0007568"}}}


id: PBO:0043488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary neurotrophic factor","termid":"PBO:0043488"}


id: PBO:0000285
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mad2-dependent checkpoint response","termid":"PBO:0000285"}


id: MONDO:0044278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. In a review of various classification schemes for sleep disorders, {2:Thorpy (1990)} listed 'short sleeper' under the broad category of 'disorders of initiating and maintaining sleep' (DIMS); however, the short sleeper phenotype or trait is not considered a sleep disorder. Individuals with this trait require less sleep in any 24-hour period than is typical for their age group.nnSee also familial advanced sleep-phase syndrome (FASPS; OMIM:604348), which is a distinct disorder characterized by very early sleep onset and offset.","definition_xrefs":["OMIM:612975"],"gene_count":0,"genotype_count":0,"name":"obsolete short sleeper (obsolete MONDO:0044278)","secondary_identifiers":["OMIMPS:612975"],"synonyms":[{"name":"short sleep phenotype","type":"related"},{"name":"short sleeper","type":"related"}],"termid":"MONDO:0044278","xrefs":{"Monarch":{"xref_id":"0044278"}}}


id: PBO:0078736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase O","termid":"PBO:0078736"}


id: PATO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being a quadrilateral with two parallel sides.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quadrangular","termid":"PATO:0001988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trapezoid","synonyms":[{"name":"trapezoidal","type":"exact"}],"termid":"PATO:0002044"}


id: GO:0045686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glia cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gliogenesis","termid":"GO:0014014"},{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"negatively_regulates","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell differentiation","synonyms":[{"name":"down regulation of glial cell differentiation","type":"exact"},{"name":"down-regulation of glial cell differentiation","type":"exact"},{"name":"downregulation of glial cell differentiation","type":"exact"},{"name":"inhibition of glial cell differentiation","type":"narrow"},{"name":"negative regulation of glia cell differentiation","type":"exact"},{"name":"negative regulation of neuroglia differentiation","type":"exact"}],"termid":"GO:0045686"}


id: PBO:0048368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA","termid":"PBO:0048368"}


id: PBO:0017086
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously incorrectly annotated as the ortholog Sae2p","termid":"PBO:0017086"}


id: PBO:0046871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3 metabolism regulating signaling molecule B","termid":"PBO:0046871"}


id: PBO:0071541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 6","termid":"PBO:0071541"}


id: GO:0070803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of metula development, a process that leads to the formation of metulae. Metulae are elongated mononucleate cells that bud from the surface of the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of metula development","termid":"GO:0070802"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"metula development","termid":"GO:0070789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metula development","termid":"GO:0070803"}


id: MONDO:0017981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syngnathia-cleft palate syndrome","secondary_identifiers":["MEDGEN:1842763","UMLS:C5680792","Orphanet:3263","GARD:5091"],"synonyms":[{"name":"syngnathia cleft palate","type":"related"}],"termid":"MONDO:0017981","xrefs":{"Monarch":{"xref_id":"0017981"}}}


id: GO:1990819
data:
  {"annotated_genes":["SJAG_01888","SJAG_00677","SJAG_03453","SJAG_01171","SJAG_00938","SJAG_02718","SJAG_01017","SJAG_01943","SJAG_03011","SJAG_03646","SJAG_04887","SJAG_03444","SJAG_05001","SJAG_04781","SJAG_02486","SJAG_03357","SJAG_00667"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88063,88879,90634,92305,93617,93813,95156,99352,99947,101738,101739,107860,107921,111107,114413,115964,119372],"is_not":false,"summary":null,"term":"GO:1990819"}]},"cv_name":"cellular_component","definition":"A focus at the mating projection tip where the cell wall is degraded during conjugation with cellular fusion. Actin filaments form an aster-like structure from this location.","definition_xrefs":["PMID:25825517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"},{"relation_name":"part_of","term_name":"mating projection tip","termid":"GO:0043332"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_02486":null,"SJAG_02718":null,"SJAG_03011":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03646":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"mating projection actin fusion focus","references_by_uniquename":{"GO_REF:0000107":null,"PMID:36148799":null},"synonyms":[{"name":"actin fusion focus","type":"broad"}],"termid":"GO:1990819","terms_by_termid":{"GO:1990819":null}}


id: MONDO:0029465
data:
  {"annotated_genes":["SJAG_01991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84899],"is_not":false,"summary":null,"term":"MONDO:0029465"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 69","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617863","UMLS:C5676896","MEDGEN:1808299"],"synonyms":[{"name":"MRD69","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 69","type":"exact"},{"name":"mental retardation, autosomal dominant 69","type":"exact"}],"termid":"MONDO:0029465","terms_by_termid":{"MONDO:0029465":null},"xrefs":{"Monarch":{"xref_id":"0029465"}}}


id: MONDO:0054817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 17","secondary_identifiers":["UMLS:C4693912","OMIM:618006","MEDGEN:1644557","DOID:0070404"],"synonyms":[{"name":"HLD17","type":"related"},{"name":"leukodystrophy, hypomyelinating, 17","type":"exact"}],"termid":"MONDO:0054817","xrefs":{"Monarch":{"xref_id":"0054817"}}}


id: GO:0009405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogenesis (obsolete GO:0009405)","synonyms":[{"name":"virulence","type":"related"}],"termid":"GO:0009405"}


id: MONDO:0015417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tessier number 6 facial cleft","secondary_identifiers":["icd11.foundation:1934815559","MEDGEN:609365","Orphanet:141265","UMLS:C0432120","GARD:19969"],"termid":"MONDO:0015417","xrefs":{"Monarch":{"xref_id":"0015417"}}}


id: GO:0102695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + cis-zeatin = H+ + cis-zeatin-7-N-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:cis-zeatin 7-N-glucosyltransferase activity (obsolete GO:0102695)","termid":"GO:0102695"}


id: PBO:0036524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase Ura6","termid":"PBO:0036524"}


id: GO:0150045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic signaling by nitric oxide.","definition_xrefs":["PMID:26311509","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"regulates","term_name":"synaptic signaling by nitric oxide","termid":"GO:0099163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of synaptic signaling by nitric oxide","termid":"GO:0150045"}


id: PR:000027626
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine-protein phosphatase Clp1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:18951025","PMID:16085489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine-protein phosphatase Clp1","termid":"PR:000027623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase Clp1 unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1782.09c","synonyms":[{"name":"Spom-CDC14/UnMod","type":"exact"},{"name":"Spom-clp1/UnMod","type":"exact"},{"name":"clip1p unmodified","type":"related"},{"name":"flp1p unmodified","type":"related"},{"name":"tyrosine-protein phosphatase CDC14 unmodified form (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000027626"}


id: PR:P30666
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11630:SF46","OMA:SCHPO04285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.02c","secondary_identifiers":["UniProtKB:P30666"],"synonyms":[{"name":"Spom972h-MCM3","type":"exact"},{"name":"minichromosome maintenance protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30666"}


id: GO:0170033
data:
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id: PBO:0031231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_deacetylation","termid":"PBO:0031231"}


id: PBO:0069005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 249, pseudogene","termid":"PBO:0069005"}


id: GO:0017098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sulfonylurea receptor, a regulatory subunit of the ATP-sensitive potassium ion channel.","definition_xrefs":["GOC:ceb","PMID:11938023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"sulfonylurea receptor binding","synonyms":[{"name":"sulfonylurea receptor ligand","type":"narrow"},{"name":"sulphonylurea receptor binding","type":"exact"}],"termid":"GO:0017098"}


id: PBO:0081162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RNA binding protein pseudogene 1","termid":"PBO:0081162"}


id: PBO:0062812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 3","termid":"PBO:0062812"}


id: PBO:0071910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 49","termid":"PBO:0071910"}


id: GO:0031496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mating type switching.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating type switching","termid":"GO:0031494"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mating type switching","synonyms":[{"name":"activation of mating type switching","type":"narrow"},{"name":"stimulation of mating type switching","type":"narrow"},{"name":"up regulation of mating type switching","type":"exact"},{"name":"up-regulation of mating type switching","type":"exact"},{"name":"upregulation of mating type switching","type":"exact"}],"termid":"GO:0031496"}


id: PBO:0091648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar heme ABC transmembrane exporter Abc3","termid":"PBO:0091648"}


id: SO:0001657
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the molecule, interacts selectively and non-covalently with a small molecule such as a drug, or hormone.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding_site","termid":"SO:0000409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand_binding_site","synonyms":[{"name":"ligand binding site","type":"exact"}],"termid":"SO:0001657"}


id: MONDO:1011446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Medium-Chain acyl-CoA dehydrogenase deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medium-chain acyl-CoA dehydrogenase deficiency, non-human animal","secondary_identifiers":["OMIA:002585"],"termid":"MONDO:1011446","xrefs":{"Monarch":{"xref_id":"1011446"}}}


id: FYPO:0003548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G1/S transition of the mitotic cell cycle does not occur after the cell has been arrested in G1 phase due to nitrogen starvation. The cell remains arrested in G1.","definition_xrefs":["PomBase:mah","PMID:9366254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1/S phase transition","termid":"FYPO:0000394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitotic G1/S phase transition following nitrogen starvation-induced G1 phase arrest","synonyms":[{"name":"abolished cell cycle progression through mitotic G1/S phase transition following cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"},{"name":"abolished mitotic G1 phase progression following nitrogen starvation-induced G1 phase arrest","type":"related"},{"name":"abolished mitotic G1/S transition following nitrogen starvation-induced G1 phase arrest","type":"exact"},{"name":"mitotic G1/S phase transition abolished after recovery from nitrogen starvation-induced G1 arrest","type":"exact"},{"name":"mitotic cell cycle G1/S phase transition abolished following nitrogen starvation-induced G1 phase arrest","type":"exact"}],"termid":"FYPO:0003548"}


id: PBO:0058000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3924","termid":"PBO:0058000"}


id: GO:0003759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct, non-covalent assembly of glycoproteins in vivo, but is not a component of the assembled structures when performing its normal biological function. Utilizes a lectin site as a means to associate with the unfolded glycoproteins.","definition_xrefs":["PMID:11337494","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete glycoprotein-specific chaperone activity (obsolete GO:0003759)","synonyms":[{"name":"glycoprotein-specific chaperone activity","type":"exact"}],"termid":"GO:0003759"}


id: PBO:0113027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of 1,3-beta-D-glucan synthase; transfers glucose from UDP-glucose to growing chains of glucan via β-1,3-glycosidic linkages, translocating polymerized β-1,3-glucan to the extracellular space; role in cell wall synthesis and maintenance; functionally redundant with alternate catalytic subunit Gsc2p; activity regulated by Rho1p, a subunit of the synthase complex; localizes to sites of cell wall remodeling; contains a cellulose-synthase-like fold; antifungal drug target","termid":"PBO:0113027"}


id: GO:0048302
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isotype switching to IgG isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"regulates","term_name":"isotype switching to IgG isotypes","termid":"GO:0048291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0010467","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of isotype switching to IgG isotypes","synonyms":[{"name":"regulation of class switch recombination to IgG isotypes","type":"exact"},{"name":"regulation of class switching to IgG isotypes","type":"exact"},{"name":"regulation of isotype switch recombination to IgG isotypes","type":"exact"}],"termid":"GO:0048302"}


id: GO:0048821
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an erythrocyte over time, from its formation to the mature structure.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell development","termid":"GO:0061515"},{"relation_name":"part_of","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte development","synonyms":[{"name":"RBC development","type":"exact"},{"name":"red blood cell development","type":"exact"}],"termid":"GO:0048821"}


id: GO:0015150
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fucose from one side of a membrane to the other. Fucose is 6-deoxygalactose and has two enantiomers, D-fucose and L-fucose.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"fucose transmembrane transporter activity","termid":"GO:0015150"}


id: MONDO:0014919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplastic polyposis syndrome","termid":"MONDO:0015524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"sessile serrated polyposis cancer syndrome","secondary_identifiers":["OMIM:617108","UMLS:C4310714","MEDGEN:934681"],"synonyms":[{"name":"SSPCS","type":"exact"},{"name":"sessile serrated polyposis cancer syndrome","type":"exact"},{"name":"sessile serrated polyposis cancer syndrome; SSPCS","type":"exact"}],"termid":"MONDO:0014919","xrefs":{"Monarch":{"xref_id":"0014919"}}}


id: PBO:0065149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 1 pseudogene 1","termid":"PBO:0065149"}


id: PBO:0072646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication termination factor 2","termid":"PBO:0072646"}


id: PBO:0034375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-does_not_overlap_sequence_of","termid":"PBO:0034375"}


id: PBO:0076749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymine DNA glycosylase","termid":"PBO:0076749"}


id: MONDO:0003738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare dysgammaglobulinemia characterized by low or undetectable serum levels of immunoglobulin class E (IgE). It is an uncommon primary antibody deficiency. It is most likely an inherited immunodeficiency. It may be caused by decreased or inefficient class-switching from progenitor B cells without any corresponding decreases in the other isotypes. Most affected persons appear asymptomatic but may show a predisposition to autoimmune and respiratory diseases.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysgammaglobulinemia","termid":"MONDO:0001342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"selective IgE deficiency disease","secondary_identifiers":["NCIT:C27143","DOID:6024","MEDGEN:96020","SCTID:234540007","UMLS:C0398694","ICD9:279.03"],"synonyms":[{"name":"selective IgE immunodeficiency","type":"exact"},{"name":"selective immunoglobulin E deficiency","type":"exact"}],"termid":"MONDO:0003738","xrefs":{"Monarch":{"xref_id":"0003738"}}}


id: GO:1990326
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXVIII) chains.","definition_xrefs":["GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XXVIII trimer","termid":"GO:1990326"}


id: PBO:0077487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 207","termid":"PBO:0077487"}


id: GO:1905911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dauer entry.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21531333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of dauer entry","termid":"GO:1905909"},{"relation_name":"positively_regulates","term_name":"dauer entry","termid":"GO:0043053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dauer entry","synonyms":[{"name":"activation of dauer entry","type":"narrow"},{"name":"activation of nematode entry into dormancy","type":"narrow"},{"name":"positive regulation of nematode entry into dormancy","type":"exact"},{"name":"up regulation of dauer entry","type":"exact"},{"name":"up regulation of nematode entry into dormancy","type":"exact"},{"name":"up-regulation of dauer entry","type":"exact"},{"name":"up-regulation of nematode entry into dormancy","type":"exact"},{"name":"upregulation of dauer entry","type":"exact"},{"name":"upregulation of nematode entry into dormancy","type":"exact"}],"termid":"GO:1905911"}


id: PBO:0113189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity vacuolar phosphate transporter; exports phosphate from vacuolar lumen to cytosol; regulates phosphate and polyphosphate metabolism; acts upstream of Pho81p in regulation of PHO pathway; localizes to sites of contact between vacuole and mitochondria (vCLAMPs); targeted to vacuole via AP-3 pathway; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth","termid":"PBO:0113189"}


id: PBO:0085718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in synthesis of the thiamine precursor HMP; member of a subtelomeric gene family including THI5, THI11, THI12, and THI13; hydroxymethylpyrimidine is also known as HMP","termid":"PBO:0085718"}


id: GO:0002572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a pro-T cell. Pro-T cells are the earliest stage of the T cell lineage but are not fully committed.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"},{"relation_name":"part_of","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pro-T cell differentiation","synonyms":[{"name":"pro-T lymphocyte differentiation","type":"exact"}],"termid":"GO:0002572"}


id: GO:1903539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a postsynaptic membrane.","definition_xrefs":["GOC:TermGenie","GOC:kmv","GO_REF:0000087","PMID:9753322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to postsynapse","termid":"GO:0062237"},{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to postsynaptic membrane","synonyms":[{"name":"protein localisation in postsynaptic membrane","type":"exact"},{"name":"protein localisation to postsynaptic membrane","type":"exact"},{"name":"protein localization in postsynaptic membrane","type":"exact"}],"termid":"GO:1903539"}


id: PBO:0072182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 9","termid":"PBO:0072182"}


id: PBO:0065539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and tensin homolog","termid":"PBO:0065539"}


id: PBO:0085265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxin; required for targeting of peroxisomal matrix proteins containing PTS2; interacts with Pex7p; partially redundant with Pex21p; primarily responsible for peroxisomal import during growth on oleate, and expression is induced during oleate growth","termid":"PBO:0085265"}


id: GO:0034510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which centromeres are physically detached from each other during chromosome separation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"chromosome separation","termid":"GO:0051304"},{"relation_name":"part_of","term_name":"nuclear chromosome segregation","termid":"GO:0098813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"centromere separation","termid":"GO:0034510"}


id: GO:0099590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the internalization of a neurotransmitter receptor.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter receptor internalization","termid":"GO:0099590"}


id: MONDO:0010272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic X-linked intellectual disability type 10 (obsolete MONDO:0010272)","termid":"MONDO:0010272","xrefs":{"Monarch":{"xref_id":"0010272"}}}


id: MONDO:0018615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemicrania continua (HC) is a type of primary headache disorder, which means the headache is not caused by another medical condition. Symptoms of HC include constant mild to moderate pain on one side of the head (unilateral) with periods of more intense, severe, migraine -like pain (exacerbations). These severe pain periods can last from 20 minutes to days. The frequency of exacerbations also varies greatly. The headache stays on the same side of the head and usually without pain free periods. HC is more common in women and most often starts in adulthood, but may begin anywhere from 5 to 67 years of age. Diagnosis of hemicrania continua (HC) is made by ruling out other possible causes of the pain and by clinical symptoms. During the periods of severe pain, at least one of the following symptoms must be present on same side of the body as the headache: watering or red eyes (conjunctival injection), congested or runny nose, or drooping eyelid. In addition, the headache pain must respond to treatment with indomethacin. The cause of HC is unknown. Other treatments for those who cannot tolerate long term indomethacin therapy are being studied.","direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal autonomic cephalalgia","termid":"MONDO:0015530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemicrania continua","secondary_identifiers":["UMLS:C2349425","Orphanet:443070","ICD9:339.41","ICD10CM:G44.51","GARD:10795","SCTID:443095000","icd11.foundation:1093161847","MEDGEN:748511"],"termid":"MONDO:0018615","xrefs":{"Monarch":{"xref_id":"0018615"}}}


id: PBO:0058405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4775","termid":"PBO:0058405"}


id: GO:0042149
data:
  {"annotated_genes":["SJAG_03048","SJAG_02380","SJAG_01245","SJAG_03486","SJAG_00534","SJAG_02785","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69866,75788,75794,98228,100239,116273],"is_not":false,"summary":null,"term":"GO:0042149"},{"annotations":[102183],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of glucose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00534":null,"SJAG_01245":null,"SJAG_02380":null,"SJAG_02785":null,"SJAG_03048":null,"SJAG_03486":null,"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucose starvation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0042149","terms_by_termid":{"GO:0042149":null,"GO:1904547":null}}


id: PBO:0080145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vav guanine nucleotide exchange factor 1","termid":"PBO:0080145"}


id: GO:0004813
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75620],"is_not":false,"summary":null,"term":"GO:0004813"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala).","definition_xrefs":["EC:6.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"alanine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ALANINE--TRNA-LIGASE-RXN","RHEA:12540","Reactome:R-HSA-379864","Reactome:R-HSA-380177"],"synonyms":[{"name":"Ala-tRNA synthetase activity","type":"related"},{"name":"AlaRS","type":"related"},{"name":"L-alanine:tRNAAla ligase (AMP-forming)","type":"related"},{"name":"alanine tRNA synthetase activity","type":"related"},{"name":"alanine transfer RNA synthetase activity","type":"related"},{"name":"alanine translase activity","type":"related"},{"name":"alanine-transfer RNA ligase activity","type":"related"},{"name":"alanyl-tRNA synthetase activity","type":"exact"},{"name":"alanyl-transfer RNA synthetase activity","type":"related"},{"name":"alanyl-transfer ribonucleate synthase activity","type":"related"},{"name":"alanyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"alanyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004813","terms_by_termid":{"GO:0004813":null}}


id: PBO:0083933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin involved in regulation of the cell cycle; activates Cdc28p kinase to promote the G1 to S phase transition; late G1 specific expression depends on transcription factor complexes, MBF (Swi6p-Mbp1p) and SBF (Swi6p-Swi4p); CLN1 has a paralog, CLN2, that arose from the whole genome duplication; cell cycle arrest phenotype of the cln1 cln2 cln3 triple null mutant is complemented by any of human cyclins CCNA2, CCNB1, CCNC, CCND1, or CCNE1","termid":"PBO:0083933"}


id: GO:0141124
data:
  {"annotated_genes":["SJAG_00993","SJAG_04471","SJAG_04468","SJAG_02183","SJAG_04597","SJAG_00296","SJAG_00600","SJAG_06592","SJAG_02486","SJAG_03353","SJAG_00169","SJAG_01345","SJAG_00318","SJAG_04668","SJAG_04666","SJAG_03828","SJAG_01718","SJAG_01587","SJAG_03488","SJAG_06621","SJAG_00229","SJAG_03384","SJAG_03508","SJAG_03802","SJAG_00027","SJAG_04825","SJAG_02013","SJAG_03893","SJAG_04503","SJAG_03592","SJAG_04551","SJAG_02000","SJAG_03793","SJAG_06270","SJAG_02923","SJAG_03903","SJAG_02429","SJAG_00424","SJAG_03048","SJAG_01386","SJAG_01790","SJAG_03361","SJAG_00117","SJAG_02342","SJAG_04943","SJAG_02072","SJAG_02520","SJAG_03799","SJAG_04455","SJAG_01464","SJAG_00990","SJAG_03185","SJAG_04776","SJAG_01805","SJAG_03501","SJAG_00082","SJAG_04464","SJAG_00526","SJAG_02135","SJAG_03625","SJAG_01885","SJAG_03263","SJAG_00078","SJAG_02392","SJAG_02233","SJAG_03753","SJAG_01978","SJAG_03631","SJAG_04873","SJAG_00883","SJAG_03340","SJAG_05000","SJAG_03969","SJAG_04777","SJAG_02514","SJAG_02232","SJAG_03342","SJAG_03376","SJAG_02169","SJAG_03879","SJAG_01787","SJAG_03453","SJAG_00845","SJAG_01188","SJAG_03681","SJAG_03705","SJAG_00975","SJAG_02858","SJAG_01181","SJAG_02945","SJAG_00781","SJAG_03936","SJAG_04329","SJAG_03486","SJAG_04462","SJAG_01199","SJAG_02379","SJAG_01114","SJAG_00610","SJAG_02592","SJAG_06622","SJAG_04871","SJAG_04522","SJAG_02878"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92194,97905,79344,72752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097720"},{"annotations":[65111,117177,97458,91011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019722"},{"annotations":[116271,118022,115933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061762"},{"annotations":[101939,110770,92059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000196"},{"annotations":[69792,79972,109462,99242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140469"},{"annotations":[106076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007254"},{"annotations":[57459,99773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000165"},{"annotations":[100795,115920],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0106057"},{"annotations":[103594,107407,118111,95643,106846,99243],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903138"},{"annotations":[87995],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0043409"},{"annotations":[94827,99245,116873,118112,95763,91457],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903753"},{"annotations":[106935],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0180040"},{"annotations":[72018],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0046580"},{"annotations":[71352],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0035024"},{"annotations":[104842,109964,95431,106896,99394,107337,92724,92640,72579,101074,93259,90520,91527,107031,115696],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[101553,110137,94164,69977,106077,72902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038066"},{"annotations":[93125,106078,89021,91983,96841,96171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071507"},{"annotations":[110771,101943],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0050850"},{"annotations":[87873,92213,90561,89225,102637,117704],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903139"},{"annotations":[95049,108736,108737,117166,108740,108738,108734,111615,112273,118078,108735,108739],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900745"},{"annotations":[115380,87932,90642,103496,114416],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0062038"},{"annotations":[87326,102181,110318,89791,93604],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[110805,104862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031291"},{"annotations":[74533,80229],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043408"},{"annotations":[69861,74555],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032483"},{"annotations":[113158,104296,89753],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031029"},{"annotations":[75144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007266"},{"annotations":[106941,89029,100744,74031,106184,94211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031028"}]},"cv_name":"biological_process","definition":"An intracellular signaling module that is part of larger signaling pathways that can be initiated either intracellularly or by cell surface receptors. 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id: MONDO:0030768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa, junctional 5A, intermediate","secondary_identifiers":["UMLS:C5676956","MEDGEN:1811851","OMIM:619816"],"synonyms":[{"name":"JEB5A","type":"exact"},{"name":"epidermolysis bullosa, junctional 5A, generalised intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 5A, generalized intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 5A, intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 5A, non-herlitz IIA","type":"exact"}],"termid":"MONDO:0030768","xrefs":{"Monarch":{"xref_id":"0030768"}}}


id: PBO:0047358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXL12 pseudogene 1","termid":"PBO:0047358"}


id: PBO:0075617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide peptidase like 2C","termid":"PBO:0075617"}


id: PBO:0029540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_spheroid_cells_(obsolete_FYPO:0002182)","termid":"PBO:0029540"}


id: GO:1990206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: jasmonyl-Ile + H2O = jasmonic acid + L-isoleucine.","definition_xrefs":["PMID:23943861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"jasmonyl-Ile conjugate hydrolase activity","synonyms":[{"name":"JA-Ile hydrolase","type":"related"}],"termid":"GO:1990206"}


id: GO:1904335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ductus arteriosus closure.","definition_xrefs":["PMID:16303610","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of artery morphogenesis","termid":"GO:1905651"},{"relation_name":"regulates","term_name":"ductus arteriosus closure","termid":"GO:0097070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ductus arteriosus closure","termid":"GO:1904335"}


id: MONDO:0033885
data:
  {"annotated_genes":["SJAG_04348","SJAG_06392","SJAG_06002","SJAG_03296","SJAG_01077","SJAG_00852","SJAG_03173","SJAG_04450","SJAG_02504","SJAG_03046","SJAG_02480","SJAG_03550","SJAG_04553","SJAG_01190","SJAG_03322","SJAG_01355","SJAG_06046"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033639"},{"annotations":[85542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033645"},{"annotations":[85541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033649"},{"annotations":[85553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033651"},{"annotations":[85547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033653"},{"annotations":[85549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033654"},{"annotations":[85550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033655"},{"annotations":[85554,85555,85556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033656"},{"annotations":[85532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033635"},{"annotations":[85529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033636"},{"annotations":[85538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033637"},{"annotations":[85539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033638"},{"annotations":[87007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0700250"},{"annotations":[86341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859160"},{"annotations":[86377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859520"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00852":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_02480":null,"SJAG_02504":null,"SJAG_03046":null,"SJAG_03173":null,"SJAG_03296":null,"SJAG_03322":null,"SJAG_03550":null,"SJAG_04348":null,"SJAG_04450":null,"SJAG_04553":null,"SJAG_06002":null,"SJAG_06046":null,"SJAG_06392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex IV deficiency, nuclear-type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:220110"],"termid":"MONDO:0033885","terms_by_termid":{"MONDO:0033635":null,"MONDO:0033636":null,"MONDO:0033637":null,"MONDO:0033638":null,"MONDO:0033639":null,"MONDO:0033645":null,"MONDO:0033649":null,"MONDO:0033651":null,"MONDO:0033653":null,"MONDO:0033654":null,"MONDO:0033655":null,"MONDO:0033656":null,"MONDO:0700250":null,"MONDO:0859160":null,"MONDO:0859520":null},"xrefs":{"Monarch":{"xref_id":"0033885"}}}


id: GO:0033982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydro-L-gulonate 6-phosphate + H+ = L-xylulose 5-phosphate + CO2.","definition_xrefs":["EC:4.1.1.85","RHEA:14353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"3-dehydro-L-gulonate-6-phosphate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R07125","MetaCyc:RXN0-705"],"synonyms":[{"name":"3-dehydro-L-gulonate-6-phosphate carboxy-lyase (L-xylulose-5-phosphate-forming) activity","type":"related"},{"name":"3-dehydro-L-gulonate-6-phosphate carboxy-lyase activity","type":"related"},{"name":"3-keto-L-gulonate 6-phosphate decarboxylase activity","type":"related"},{"name":"KGPDC","type":"related"},{"name":"SgaH","type":"related"},{"name":"SgbH","type":"related"},{"name":"UlaD","type":"related"}],"termid":"GO:0033982"}


id: MONDO:1012750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in dogs due to a mutation in the DLX6 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, dog","termid":"MONDO:1010526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, DLX6-related, dog","secondary_identifiers":["OMIA:001919-9615"],"synonyms":[{"name":"Cleft palate 1, DLX6-related in Canis lupus familiaris (dog)","type":"exact"}],"termid":"MONDO:1012750","xrefs":{"Monarch":{"xref_id":"1012750"}}}


id: GO:0031806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G protein-coupled (metabotropic) histamine receptor.","definition_xrefs":["GOC:mah","GOC:nln","PMID:12679144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"G protein-coupled histamine receptor binding","synonyms":[{"name":"G-protein coupled histamine receptor binding","type":"exact"},{"name":"metabotropic histamine receptor binding","type":"exact"},{"name":"metabotropic histamine receptor ligand","type":"narrow"}],"termid":"GO:0031806"}


id: GO:0001082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase I transcription factor, which may be a single protein or a complex, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase I transcription factor binding (obsolete GO:0001082)","synonyms":[{"name":"RNA polymerase I transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0001082"}


id: GO:0010697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the process involving the release of duplicated mitotic spindle pole bodies (SPBs) and their migration away from each other within the nuclear membrane.","definition_xrefs":["PMID:18500339","GOC:tb","GOC:dph","PMID:16792804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle pole body separation","termid":"GO:0010695"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"negatively_regulates","term_name":"initial mitotic spindle pole body separation","termid":"GO:0000073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic spindle pole body separation","synonyms":[{"name":"negative regulation of SPB separation","type":"exact"}],"termid":"GO:0010697"}


id: GO:1903014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:22365144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to differentiation-inducing factor 1","termid":"GO:1903013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to differentiation-inducing factor 1","synonyms":[{"name":"DIF-1","type":"related"},{"name":"cellular response to 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one","type":"exact"},{"name":"cellular response to DIF-1","type":"related"},{"name":"cellular response to DIF1","type":"related"}],"termid":"GO:1903014"}


id: GO:0046540
data:
  {"annotated_genes":["SJAG_03954","SJAG_02843","SJAG_04497","SJAG_01819","SJAG_04538","SJAG_04529","SJAG_03410","SJAG_00643","SJAG_01870","SJAG_00989","SJAG_05240","SJAG_02304","SJAG_03369","SJAG_00531","SJAG_03469","SJAG_03070","SJAG_03460","SJAG_01308","SJAG_04433","SJAG_01327","SJAG_02455","SJAG_02279","SJAG_00414","SJAG_01301","SJAG_02295","SJAG_01634","SJAG_00147","SJAG_04222","SJAG_02469","SJAG_04405"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61883,63155,70236,70450,71289,72511,74033,75435,76087,77133,77167,77246,77270,78130,78293,78593,79038,79836,92912,94972,97810,100432,105636,105678,108332,109861,110420,110929,114652,116195],"is_not":false,"summary":null,"term":"GO:0046540"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that is formed by the association of the U4/U6 and U5 snRNPs.","definition_xrefs":["PMID:11867543","GOC:krc","ISBN:0879695897","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal tri-snRNP complex","termid":"GO:0097526"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00414":null,"SJAG_00531":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01634":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03954":null,"SJAG_04222":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"U4/U6.U5 snRNP complex","type":"exact"}],"termid":"GO:0046540","terms_by_termid":{"GO:0046540":null}}


id: MONDO:0002601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-seminomatous germ cell tumor characterized by the presence of various tissues which correspond to the different germinal layers (endoderm, mesoderm, and ectoderm). It occurs in the testis, ovary, and extragonadal sites including central nervous system, mediastinum, lung, and stomach. According to the level of differentiation of the tissues which comprise the tumor, teratomas are classified as mature or immature. Mature teratomas are composed of well differentiated, adult-type tissues. Immature teratomas are composed of immature, fetal-type tissues. Testicular teratomas in children follow a benign clinical course. Mature ovarian teratomas without a fetal-type component have an excellent outcome. The prognosis of immature ovarian teratomas is related to the grade and stage of the tumor.","definition_xrefs":["NCIT:C3403"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete germ cell and embryonal cancer (obsolete MONDO:0002510)","termid":"MONDO:0002510"},{"relation_name":"is_a","term_name":"nongerminomatous germ cell tumor","termid":"MONDO:0021656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratoma","secondary_identifiers":["ICDO:9080/1","ONCOTREE:TT","SCTID:36591000119102","UMLS:C0039538","MESH:D013724","MEDGEN:21097","DOID:3307"],"synonyms":[{"name":"teratoma","type":"exact"}],"termid":"MONDO:0002601","xrefs":{"Monarch":{"xref_id":"0002601"}}}


id: GO:0075276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telium development, a process that leads to the formation of a teliospore-bearing sorus of the rust fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"telium development","termid":"GO:0075275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of telium development","termid":"GO:0075276"}


id: GO:0140410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: monoatomic cation(out) + HCO3-(out) = monoatomic cation(in) + HCO3-(in).","definition_xrefs":["PMID:27166256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicarbonate transmembrane transporter activity","termid":"GO:0015106"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"monoatomic cation:bicarbonate symporter activity","synonyms":[{"name":"monoatomic cation:hydrogencarbonate symporter activity","type":"exact"},{"name":"solute:bicarbonate symporter activity","type":"broad"}],"termid":"GO:0140410"}


id: PBO:0043304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin like 1, pseudogene","termid":"PBO:0043304"}


id: PBO:0064098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired like homeodomain 3","termid":"PBO:0064098"}


id: GO:0102469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:(2S)-naringenin + O2 + reduced [NADPH--hemoprotein reductase] = (2S)-2-hydroxynaringenin + H(+) + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:57588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"naringenin 2-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14069"],"termid":"GO:0102469"}


id: GO:0052475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the cell mediated immune response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont cell-mediated immune response (obsolete GO:0052475)","synonyms":[{"name":"negative regulation by organism of symbiont cell-based immune response","type":"exact"},{"name":"negative regulation by organism of symbiont cell-mediated immune response","type":"exact"}],"termid":"GO:0052475"}


id: PBO:0065073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRICKLE2 antisense RNA 2","termid":"PBO:0065073"}


id: MONDO:0003680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chondrosarcoma arising from the surface of bone. It is characterized by a lobulated growth pattern, high mitotic activity, myxoid stroma formation, and necrotic changes. It occurs in adults. Clinical presentation includes pain, and sometimes swelling.","definition_xrefs":["NCIT:C7357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone chondrosarcoma","termid":"MONDO:0000515"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"periosteal chondrosarcoma","secondary_identifiers":["UMLS:C0334549","MONDO:0003683","DOID:5859","DOID:5866","ICDO:9221/3","MEDGEN:90806"],"synonyms":[{"name":"chondrosarcoma (disease) of periosteum","type":"exact"},{"name":"juxtacortical chondrosarcoma","type":"exact"},{"name":"juxtacortical chondrosarcoma (morphologic abnormality)","type":"exact"},{"name":"periosteal chondrosarcoma","type":"exact"},{"name":"periosteum chondrosarcoma (disease)","type":"exact"}],"termid":"MONDO:0003680","xrefs":{"Monarch":{"xref_id":"0003680"}}}


id: SO:0000071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when it is located within the intron of another gene and on the same strand.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inside_intron","termid":"SO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inside_intron_parallel","synonyms":[{"name":"inside intron parallel","type":"exact"}],"termid":"SO:0000071"}


id: PBO:0001120
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.67","termid":"PBO:0001120"}


id: MONDO:0013602
data:
  {"annotated_genes":["SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85641],"is_not":false,"summary":null,"term":"MONDO:0013602"}]},"cv_name":"mondo","definition":"Any paraganglioma in which the cause of the disease is a mutation in the SDHA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"},{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"adrenal gland cancer","termid":"MONDO:0002817"},{"relation_name":"is_a","term_name":"malignant urinary system neoplasm","termid":"MONDO:0006295"},{"relation_name":"is_a","term_name":"hereditary pheochromocytoma-paraganglioma","termid":"MONDO:0017366"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paragangliomas 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3279992","OMIM:614165","MEDGEN:481622","GARD:15763"],"synonyms":[{"name":"PGL5","type":"related"},{"name":"SDHA paraganglioma","type":"exact"},{"name":"paraganglioma caused by mutation in SDHA","type":"exact"},{"name":"paragangliomas 5","type":"exact"},{"name":"paragangliomas type 5","type":"exact"}],"termid":"MONDO:0013602","terms_by_termid":{"MONDO:0013602":null},"xrefs":{"Monarch":{"xref_id":"0013602"}}}


id: PBO:0005432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug117","termid":"PBO:0005432"}


id: PR:Q09783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim8 gene.","definition_xrefs":["UniProtKB:Q09783","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.04","synonyms":[{"name":"Spom972h-tim8","type":"exact"}],"termid":"PR:Q09783"}


id: GO:0160015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Transient adhesive interactions between platelets and endothelial cells lining blood vessels. Carbohydrates on circulating platelets bind selectins or other molecules on the vessel wall causing the platelets to slow down and roll along the inner surface of the vessel wall. During this rolling motion, transitory bonds are formed and broken between surface molecules of platelets and endothelium.","definition_xrefs":["GOC:sl","PMID:29018081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"platelet rolling","termid":"GO:0160015"}


id: GO:0042714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins on DNA or RNA to form the complex that mediates dosage compensation on one or more X chromosomes.","definition_xrefs":["PMID:12672493","PMID:11102361","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"sex-chromosome dosage compensation","termid":"GO:0007549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085","GO:0006325"],"is_obsolete":false,"name":"dosage compensation complex assembly","termid":"GO:0042714"}


id: GO:0001691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Maintains the phosphorylation state of certain molecules by associating with them and preventing them from associating with active phosphatases, and thus inhibiting the enzyme activity without interacting with the enzyme. Often pertains to proteins belonging to dual-specificity phosphatase family but lacking critical active site residues.","definition_xrefs":["GOC:ajp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase inhibitor activity","termid":"GO:0019212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0004857","GO:0003674","GO:0098772","GO:0140678","GO:0030234"],"is_obsolete":false,"name":"pseudophosphatase activity","termid":"GO:0001691"}


id: GO:0099077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"DNA-binding activity that is dependent on binding to a histone.","definition_xrefs":["PMID:11691835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"histone-dependent DNA binding","termid":"GO:0099077"}


id: PBO:0053034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARGE intronic transcript 1","termid":"PBO:0053034"}


id: MONDO:0005488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A scoliosis with no known cause arising in adolescent.","definition_xrefs":["EFO:0005423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic scoliosis","termid":"MONDO:0000726"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adolescent idiopathic scoliosis","secondary_identifiers":["Orphanet:3153","MEDGEN:450543","SCTID:203646004","UMLS:C0410702"],"termid":"MONDO:0005488","xrefs":{"Monarch":{"xref_id":"0005488"}}}


id: PBO:0089211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic translation release factor class II, GTPase eRF3","termid":"PBO:0089211"}


id: MONDO:0021167
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85068,85069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011577"}]},"cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the muscle tissue.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myositis disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:728.9","MESH:D009220","DOID:633","EFO:0000783","SCTID:128496001","MEDGEN:44564","UMLS:C0027121","NCIT:C27578"],"synonyms":[{"name":"inflammation of muscle tissue","type":"exact"},{"name":"inflammatory disorder of muscle","type":"exact"},{"name":"inflammatory disorder of muscle (disorder)","type":"exact"},{"name":"muscle tissue inflammation","type":"exact"}],"termid":"MONDO:0021167","terms_by_termid":{"MONDO:0011577":null},"xrefs":{"Monarch":{"xref_id":"0021167"}}}


id: MONDO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple mitochondrial dysfunctions syndrome (obsolete MONDO:0000143)","termid":"MONDO:0000143","xrefs":{"Monarch":{"xref_id":"0000143"}}}


id: GO:0150024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an oxidised low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["PMID:27607416","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidised low-density lipoprotein particle clearance","synonyms":[{"name":"ox-LDL particle clearance","type":"exact"},{"name":"oxLDL particle clearance","type":"exact"},{"name":"oxidised LDL particle clearance","type":"exact"},{"name":"oxidized LDL particle clearance","type":"exact"},{"name":"oxidized low-density lipoprotein particle clearance","type":"exact"}],"termid":"GO:0150024"}


id: PBO:0053504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 487","termid":"PBO:0053504"}


id: PBO:0059350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S15 pseudogene 1","termid":"PBO:0059350"}


id: FYPO:0005911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the repair of double-strand breaks formed as part of meiotic recombination begins later than normal.","definition_xrefs":["PomBase:mah","PMID:19023408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination double-strand break repair","termid":"FYPO:0005139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0000631","FYPO:0001985","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of meiotic recombination double-strand break repair","synonyms":[{"name":"delayed meiotic recombination double-strand break repair","type":"exact"},{"name":"delayed onset of DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"delayed onset of double-strand break repair during meiotic recombination","type":"exact"},{"name":"delayed onset of double-strand break repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"delayed onset of meiotic DNA double-strand break repair","type":"exact"}],"termid":"FYPO:0005911"}


id: PBO:0073775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC4A8 antisense RNA 1","termid":"PBO:0073775"}


id: MONDO:0000022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urination during sleep.","definition_xrefs":["NCIT:C118172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enuresis","termid":"MONDO:0024290"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nocturnal enuresis","secondary_identifiers":["MEDGEN:124355","MESH:D053206","UMLS:C0270327","icd11.foundation:1048673005"],"synonyms":[{"name":"bedwetting","type":"exact"},{"name":"enuresis, nocturnal","type":"exact"},{"name":"sleep enuresis","type":"exact"}],"termid":"MONDO:0000022","xrefs":{"Monarch":{"xref_id":"0000022"}}}


id: FYPO:0001461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases normally immediately following an extracellular Ca2+ stimulus. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PomBase:mah","PMID:21811607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular calcium level","termid":"FYPO:0001199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus","synonyms":[{"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001461"}


id: PBO:0109136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHOX homeobox 2","termid":"PBO:0109136"}


id: PBO:0062416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 47 pseudogene","termid":"PBO:0062416"}


id: GO:0006052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of N-acetylmannosamine, the acetylated derivative of mannosamine, 2-amino-2-deoxymannose.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylmannosamine metabolic process","termid":"GO:0006051"},{"relation_name":"is_a","term_name":"mannosamine biosynthetic process","termid":"GO:0046347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylmannosamine biosynthetic process","synonyms":[{"name":"N-acetylmannosamine anabolism","type":"exact"},{"name":"N-acetylmannosamine biosynthesis","type":"exact"},{"name":"N-acetylmannosamine formation","type":"exact"},{"name":"N-acetylmannosamine synthesis","type":"exact"}],"termid":"GO:0006052"}


id: PBO:0071790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p25 like","termid":"PBO:0071790"}


id: MONDO:1011852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurogenic muscular atrophy, non-human animal","secondary_identifiers":["OMIA:000719"],"termid":"MONDO:1011852","xrefs":{"Monarch":{"xref_id":"1011852"}}}


id: PBO:0044064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 9 like","termid":"PBO:0044064"}


id: PBO:0072386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 12","termid":"PBO:0072386"}


id: PBO:0083164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified ORF RPL36B/YPL249C-A; identified by fungal homology and RT-PCR","termid":"PBO:0083164"}


id: PBO:0083288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; null mutant displays shortened telomeres; partially overlaps the uncharacterized ORF YMR031C","termid":"PBO:0083288"}


id: MOD:00193
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-oxoalanine.","definition_xrefs":["PubMed:8681943","PubMed:9478923","RESID:AA0185#CYS","PubMed:14563551","Unimod:402#C","PubMed:7628016","DeltaMass:350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-3-oxoalanine","termid":"MOD:01169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-oxoalanine (Cys)","synonyms":[{"name":"(S)-2-amino-3-oxopropanoic acid","type":"exact"},{"name":"2-amino-3-oxopropionic acid","type":"exact"},{"name":"C(alpha)-formylglycine","type":"related"},{"name":"L-3-oxoalanine","type":"exact"},{"name":"L-amino-malonic acid semialdehyde","type":"exact"},{"name":"L-aminomalonaldehydic acid","type":"exact"},{"name":"L-serinesemialdehyde","type":"related"},{"name":"MOD_RES 3-oxoalanine (Cys)","type":"exact"},{"name":"Oxala(Cys)","type":"exact"}],"termid":"MOD:00193"}


id: MONDO:0014484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the CDK6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 12, primary, autosomal recessive","secondary_identifiers":["UMLS:C4015156","DOID:0070284","GARD:16057","MEDGEN:863593","OMIM:616080"],"synonyms":[{"name":"CDK6 autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH12","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in CDK6","type":"exact"},{"name":"microcephaly 12, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0014484","xrefs":{"Monarch":{"xref_id":"0014484"}}}


id: PBO:0066763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 61","termid":"PBO:0066763"}


id: PATO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer touching another entity along a border or with a projecting part.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abut","termid":"PATO:0002435"}


id: PATO:0002498
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed medially.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial orientation","synonyms":[{"name":"medially directed","type":"exact"}],"termid":"PATO:0002498"}


id: PBO:0047078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member G, pseudogene","termid":"PBO:0047078"}


id: MONDO:0008764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the GUCY2D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"GUCY2D-related recessive retinopathy","termid":"MONDO:0100453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320","MONDO:0006025"],"is_obsolete":false,"name":"Leber congenital amaurosis 1","secondary_identifiers":["GARD:635","DOID:0110078","MEDGEN:419026","OMIM:204000","UMLS:C2931258","ICD10CM:H35.5"],"synonyms":[{"name":"CRB","type":"related"},{"name":"GUCY2D Leber congenital amaurosis","type":"exact"},{"name":"LCA","type":"related"},{"name":"LCA1","type":"exact"},{"name":"Leber congenital amaurosis 1","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in GUCY2D","type":"exact"},{"name":"Leber congenital amaurosis type 1","type":"exact"},{"name":"amaurosis congenita of Leber 1","type":"related"},{"name":"amaurosis congenita of Leber I","type":"exact"},{"name":"amaurosis congenita of Leber, type 1","type":"related"},{"name":"retinal blindness, congenital","type":"related"}],"termid":"MONDO:0008764","xrefs":{"Monarch":{"xref_id":"0008764"}}}


id: GO:0000489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0000489"}


id: GO:0003781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete actin bundling activity (obsolete GO:0003781)","synonyms":[{"name":"actin bundling activity","type":"exact"}],"termid":"GO:0003781"}


id: PBO:0077175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"talin 2","termid":"PBO:0077175"}


id: PBO:0077049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor beta","termid":"PBO:0077049"}


id: PR:O14064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bir1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bir1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.02c","synonyms":[{"name":"Spom972h-bir1","type":"exact"},{"name":"chromosome segregation protein cut17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14064"}


id: MONDO:0003227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Impaired ability to recognize other human faces in the absence of a vision disorder. It may be a congenital disorder or the result of brain injury.","definition_xrefs":["NCIT:C85031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prosopagnosia","secondary_identifiers":["MESH:D020238","icd11.foundation:858616900","MEDGEN:65884","UMLS:C0234512","DOID:4970","HP:0010528"],"synonyms":[{"name":"face blindness","type":"exact"},{"name":"prosopagnosia","type":"exact"},{"name":"prosopagnosia (disease)","type":"exact"}],"termid":"MONDO:0003227","xrefs":{"Monarch":{"xref_id":"0003227"}}}


id: GO:0019547
data:
  {"annotated_genes":["SJAG_03398"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70254],"is_not":false,"summary":null,"term":"GO:0019547"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including ornithine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine catabolic process","termid":"GO:0006527"},{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"arginine catabolic process to ornithine","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"arginine breakdown to ornithine","type":"exact"},{"name":"arginine degradation to ornithine","type":"exact"}],"termid":"GO:0019547","terms_by_termid":{"GO:0019547":null}}


id: PBO:0086059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with ribosomes; has a putative RNA binding domain; interacts with Tma22p; null mutant exhibits translation defects; has homology to human oncogene MCT-1; protein abundance increases in response to DNA replication stress","termid":"PBO:0086059"}


id: GO:0008261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with allatostatin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"allatostatin receptor activity","termid":"GO:0008261"}


id: MONDO:0010960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 3","secondary_identifiers":["UMLS:C1833117","OMIM:600931","MEDGEN:371487"],"synonyms":[{"name":"Pcdh3","type":"related"},{"name":"protocadherin 3","type":"exact"},{"name":"protocadherin type 3","type":"exact"}],"termid":"MONDO:0010960","xrefs":{"Monarch":{"xref_id":"0010960"}}}


id: PBO:0036078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_deactivation_of_mitotic_spindle_assembly_checkpoint","termid":"PBO:0036078"}


id: PR:A0ZWU1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eaf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A0ZWU1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ell1-associated factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.10c","synonyms":[{"name":"Spom972h-eaf1","type":"exact"}],"termid":"PR:A0ZWU1"}


id: PBO:0109966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial steroid dehydrogenase","termid":"PBO:0109966"}


id: PBO:0073891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 7","termid":"PBO:0073891"}


id: PBO:0084971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(+)-dependent glutamate synthase (GOGAT); synthesizes glutamate from glutamine and alpha-ketoglutarate; with Gln1p, forms the secondary pathway for glutamate biosynthesis from ammonia; expression regulated by nitrogen source; assembles into filaments as cells approach stationary phase and under cytosolic acidification and starvation conditions","termid":"PBO:0084971"}


id: GO:1903112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["GOC:bhm","GO_REF:0000058","GOC:TermGenie","PMID:24339919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"},{"relation_name":"is_a","term_name":"positive regulation of single strand break repair","termid":"GO:1903518"},{"relation_name":"positively_regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"positive regulation of single-strand break repair via homologous recombination","synonyms":[{"name":"activation of single-strand break repair via homologous recombination","type":"narrow"},{"name":"up regulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"up-regulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"upregulation of single-strand break repair via homologous recombination","type":"exact"}],"termid":"GO:1903112"}


id: MONDO:0009884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet prostacyclin receptor defect","secondary_identifiers":["UMLS:C1849774","MEDGEN:337912","OMIM:262875","MESH:C564884"],"synonyms":[{"name":"Vienna-Hietzing defect","type":"related"},{"name":"platelet prostacyclin receptor defect","type":"exact"}],"termid":"MONDO:0009884","xrefs":{"Monarch":{"xref_id":"0009884"}}}


id: PBO:0064353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase M20 domain containing 1","termid":"PBO:0064353"}


id: MOD:01575
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01575"}


