# terms

id: MOD:00386
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and a glycine residue to form L-lysine 5-imidazolinone glycine.","definition_xrefs":["PubMed:10504696","RESID:AA0381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1S)-1,5-diaminopentyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[(S)-1,5-diaminopentanyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"Anemonia majano fluorescent protein FP486 chromophore","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Lys-Gly)","type":"exact"},{"name":"L-lysine 5-imidazolinone glycine","type":"exact"},{"name":"[2-(1,5-diaminopentanyl)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid","type":"exact"},{"name":"lysyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00386"}


id: GO:1903037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte cell-cell adhesion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:21106532","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte cell-cell adhesion","synonyms":[{"name":"regulation of leukocyte adhesion","type":"exact"},{"name":"regulation of leukocyte cell adhesion","type":"exact"}],"termid":"GO:1903037"}


id: GO:0010881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0010880"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle contraction by calcium ion signaling","termid":"GO:0010882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0023052"],"is_obsolete":false,"name":"regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion","termid":"GO:0010881"}


id: MONDO:0009291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogen debranching enzyme (GDE) deficiency, or glycogen storage disease type 3 (GSD 3), is a form of glycogen storage disease characterized by severe muscle weakness and hepatopathy.","definition_xrefs":["Orphanet:366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease III","secondary_identifiers":["MESH:D006010","DOID:2748","NCIT:C84736","GARD:9442","SCTID:66937008","UMLS:C0017922","MEDGEN:6641","MedDRA:10053250","NANDO:1201019","NANDO:1200826","NANDO:1200844","OMIM:232400","NANDO:2200539"],"synonyms":[{"name":"AGL glycogen storage disease","type":"exact"},{"name":"Agl deficiency","type":"related"},{"name":"Cori disease","type":"exact"},{"name":"Cori-Forbes disease","type":"exact"},{"name":"Forbes disease","type":"exact"},{"name":"GDE deficiency","type":"exact"},{"name":"GSD due to glycogen debranching enzyme deficiency","type":"exact"},{"name":"GSD type 3","type":"exact"},{"name":"GSD3","type":"related"},{"name":"GSDIII","type":"exact"},{"name":"Gde deficiency","type":"related"},{"name":"amylo 1,6 glucosidase deficiency","type":"exact"},{"name":"amylo-1,6-glucosidase deficiency","type":"exact"},{"name":"deficiency of debranching enzyme","type":"exact"},{"name":"deficiency of dextrin","type":"exact"},{"name":"glycogen Debrancher deficiency","type":"related"},{"name":"glycogen storage disease 3","type":"related"},{"name":"glycogen storage disease III","type":"exact"},{"name":"glycogen storage disease IIIC","type":"related"},{"name":"glycogen storage disease IIID","type":"related"},{"name":"glycogen storage disease IIIa","type":"related"},{"name":"glycogen storage disease IIIb","type":"related"},{"name":"glycogen storage disease caused by mutation in AGL","type":"exact"},{"name":"glycogen storage disease due to glycogen debranching enzyme deficiency","type":"related"},{"name":"glycogen storage disease type 3","type":"exact"},{"name":"glycogen storage disease type III","type":"exact"},{"name":"glycogen storage disease, type III","type":"exact"},{"name":"glycogenosis due to glycogen debranching enzyme deficiency","type":"exact"},{"name":"glycogenosis type 3","type":"exact"},{"name":"glycogenosis type III","type":"exact"},{"name":"limit dextrinosis","type":"exact"}],"termid":"MONDO:0009291","xrefs":{"Monarch":{"xref_id":"0009291"}}}


id: PBO:0027892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_unseparated_DNA_and_centromeric_DNA_associated_with_spindle","termid":"PBO:0027892"}


id: FYPO:0001156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells cause the pH of their growth medium to decrease by a greater amount than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered effect on growth medium","termid":"FYPO:0001155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"decreased pH of growth medium","synonyms":[{"name":"decreased pH level of growth medium","type":"exact"},{"name":"increased growth medium acidification","type":"exact"},{"name":"reduced pH of growth medium","type":"exact"}],"termid":"FYPO:0001156"}


id: MONDO:0007530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electroencephalographic peculiarity: 14 and 6 per sec. positive spike phenomenon","secondary_identifiers":["MEDGEN:377516","OMIM:130200","UMLS:C1851757"],"synonyms":[{"name":"electroencephalographic peculiarity: 14 and 6 per sec. positive spike phenomenon","type":"exact"}],"termid":"MONDO:0007530","xrefs":{"Monarch":{"xref_id":"0007530"}}}


id: PBO:0041973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 14","termid":"PBO:0041973"}


id: GO:0070330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 O2 + 3 reduced [NADPH--hemoprotein reductase] + testosterone = 17beta-estradiol + formate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase]. Also converts androst-4-ene-3,17-dione into estrone.","definition_xrefs":["EC:1.14.14.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"aromatase activity","synonyms":[{"name":"estrogen synthetase activity","type":"narrow"}],"termid":"GO:0070330"}


id: PBO:0088486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cxr1","termid":"PBO:0088486"}


id: PBO:0069076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 323, pseudogene","termid":"PBO:0069076"}


id: PBO:0028359
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ATPase_activity","termid":"PBO:0028359"}


id: GO:0016079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft.","definition_xrefs":["GOC:lmg","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"vesicle-mediated transport in synapse","termid":"GO:0099003"},{"relation_name":"is_a","term_name":"signal release from synapse","termid":"GO:0099643"},{"relation_name":"part_of","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"part_of","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"synaptic vesicle exocytosis","termid":"GO:0016079"}


id: PBO:0013448
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"soluble Myh1 level decreases in presence of cisplatin or hydrogen peroxide","termid":"PBO:0013448"}


id: MONDO:0100331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to a nerve agent or gas.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve agent poisoning","termid":"MONDO:0100331","xrefs":{"Monarch":{"xref_id":"0100331"}}}


id: MONDO:1011234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia that occurs in Campbell's desert hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, non-human animal","termid":"MONDO:1010324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia, Campbell's desert hamster","secondary_identifiers":["OMIA:000649-47665"],"termid":"MONDO:1011234","xrefs":{"Monarch":{"xref_id":"1011234"}}}


id: MONDO:0100422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly RUNX1 gene mutation. (A change in the nucleotide sequence of the RUNX1 gene.)","definition_xrefs":["NCIT:C38362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, RUNX1 gene mutation","secondary_identifiers":["NCIT:C129786","DOID:0081091"],"synonyms":[{"name":"AML, AML1 Gene Mutation","type":"exact"},{"name":"AML, AML1 Mutation","type":"exact"},{"name":"AML, AMLCR1 Gene Mutation","type":"exact"},{"name":"AML, Acute Myeloid Leukaemia 1 Gene Mutation","type":"exact"},{"name":"AML, Acute Myeloid Leukemia 1 Gene Mutation","type":"exact"},{"name":"AML, CBFA2 Gene Mutation","type":"exact"},{"name":"AML, CBFalpha2 Mutation","type":"exact"},{"name":"AML, RUNX1 gene mutation","type":"exact"},{"name":"AML, Runt-Related Transcription Factor 1 Gene Mutation","type":"exact"}],"termid":"MONDO:0100422","xrefs":{"Monarch":{"xref_id":"0100422"}}}


id: GO:0042186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of o-xylene, (1,2-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"o-xylene metabolic process","termid":"GO:0018950"},{"relation_name":"is_a","term_name":"xylene catabolic process","termid":"GO:0042184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"o-xylene catabolic process","synonyms":[{"name":"o-xylene breakdown","type":"exact"},{"name":"o-xylene catabolism","type":"exact"},{"name":"o-xylene degradation","type":"exact"},{"name":"ortho-xylene catabolic process","type":"exact"},{"name":"ortho-xylene catabolism","type":"exact"}],"termid":"GO:0042186"}


id: PBO:0076069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signaling receptor and transporter of retinol STRA6","termid":"PBO:0076069"}


id: GO:0090103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cochlea is generated and organized.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"cochlea development","termid":"GO:0090102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cochlea morphogenesis","termid":"GO:0090103"}


id: PR:P00046
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c, somatic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11961:SF0","OMA:SCHPO04793","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.07","secondary_identifiers":["UniProtKB:P00046"],"synonyms":[{"name":"Spom972h-CYCS","type":"exact"}],"termid":"PR:P00046"}


id: PBO:0028357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphatase_activity","termid":"PBO:0028357"}


id: PBO:0084828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for outer membrane protein import; cooperates with Tom70p to import the subset of proteins with multiple alpha-helical transmembrane segments, including Ugo1p, Tom20p, and others; forms a complex with Mim2p in the outer membrane that functions as cation-selective channel for translocation of positively charged precursor segments; also has a role in assembly of Tom20p into the TOM complex","termid":"PBO:0084828"}


id: SO:0002078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the intron of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_intronic_variant","synonyms":[{"name":"incomplete transcript intronic variant","type":"exact"}],"termid":"SO:0002078"}


id: PBO:0067306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 392, pseudogene","termid":"PBO:0067306"}


id: PBO:0004315
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.48","termid":"PBO:0004315"}


id: PBO:0028405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_medial_cortex_during_vegetative_growth","termid":"PBO:0028405"}


id: MONDO:0009591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metachromatic leukodystrophy is an inherited condition characterized by the accumulation of fats called sulfatides in cells, especially cells of the nervous system. This accumulation results in progressive destruction of white matter of the brain, which consists of nerve fibers covered by myelin.Affected individuals experience progressive deterioration of intellectual functions and motor skills, such as the ability to walk. They also develop loss of sensation in the extremities, incontinence, seizures, paralysis, inability to speak, blindness, and hearing loss. Eventually they lose awareness of their surroundings and become unresponsive. This condition is inherited in an autosomal recessive pattern and is caused by mutations in the ARSA and PSAP genes.","definition_xrefs":["GARD:0003230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metachromatic leukodystrophy","termid":"MONDO:0018868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0002039","MONDO:0002561","MONDO:0005559","MONDO:0002525"],"is_obsolete":false,"name":"metachromatic leukodystrophy, juvenile form","secondary_identifiers":["NANDO:2201203","UMLS:C0751276","Orphanet:309263","NANDO:1200080","MEDGEN:155528","SCTID:44359008","OMIM:250100","GARD:21329"],"synonyms":[{"name":"ARSA deficiency","type":"related"},{"name":"MLD","type":"related"},{"name":"MLD, juvenile form","type":"exact"},{"name":"Mld","type":"related"},{"name":"arylsulfatase A deficiency","type":"related"},{"name":"arylsulfatase A deficiency, juvenile form","type":"exact"},{"name":"cerebral sclerosis diffuse metachromatic form","type":"related"},{"name":"cerebral sclerosis, diffuse, metachromatic form","type":"related"},{"name":"cerebroside sulfatase deficiency","type":"related"},{"name":"leukodystrophy metachromatic","type":"related"},{"name":"metachromatic leukodystrophy","type":"related"},{"name":"metachromatic leukodystrophy, adult","type":"related"},{"name":"metachromatic leukodystrophy, juvenile","type":"related"},{"name":"metachromatic leukodystrophy, juvenile form","type":"exact"},{"name":"metachromatic leukodystrophy, late infantile","type":"related"},{"name":"metachromatic leukoencephalopathy","type":"related"},{"name":"pseudoarylsulfatase A deficiency","type":"related"},{"name":"sulfatide lipidosis","type":"related"}],"termid":"MONDO:0009591","xrefs":{"Monarch":{"xref_id":"0009591"}}}


id: PBO:0030139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GTP_binding","termid":"PBO:0030139"}


id: PR:O14075
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glyoxylate/hydroxypyruvate reductase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01215","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacid dehydrogenase UNK4.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.10","secondary_identifiers":["UniProtKB:O14075"],"synonyms":[{"name":"Spom972h-ghrB","type":"exact"}],"termid":"PR:O14075"}


id: MONDO:0013970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder of branched-chain amino acid metabolism characterized by childhood-onset epilepsy, autism and intellectual disability with reduced levels of plasma branched chain aminoacids.","definition_xrefs":["Orphanet:308410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inborn disorder of branched-chain amino acid metabolism","termid":"MONDO:0019242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"branched-chain keto acid dehydrogenase kinase deficiency","secondary_identifiers":["MEDGEN:766992","OMIM:614923","UMLS:C3554078","DOID:0090126","GARD:17389"],"synonyms":[{"name":"BCKDK deficiency","type":"exact"},{"name":"BCKDKD","type":"exact"},{"name":"Bckdk deficiency","type":"related"},{"name":"autism - epilepsy syndrome due to branched chain ketoacid dehydrogenase kinase deficiency","type":"exact"},{"name":"branched-chain KETO acid dehydrogenase KINASE deficiency","type":"related"},{"name":"branched-chain keto acid dehydrogenase kinase deficiency","type":"exact"}],"termid":"MONDO:0013970","xrefs":{"Monarch":{"xref_id":"0013970"}}}


id: MONDO:0009613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive form of methylmalonic aciduria, caused by mutation(s) in the MMAA gene, encoding MMAA protein.","definition_xrefs":["NCIT:C142171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B12-responsive methylmalonic acidemia","termid":"MONDO:0017214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"methylmalonic aciduria, cblA type","secondary_identifiers":["SCTID:82245003","Orphanet:79310","UMLS:C1855109","DOID:0060742","OMIM:251100","MEDGEN:344422","NANDO:2201105","NANDO:1200795","GARD:5500","SCTID:73843004"],"synonyms":[{"name":"MMA Cbl A type","type":"related"},{"name":"Methylmalonic aciduria, vitamin B12-responsive, cblA type","type":"exact"},{"name":"cblA - cobalamin locus a","type":"related"},{"name":"cblA methylmalonic acidemia","type":"related"},{"name":"cblB - cobalamin locus b","type":"related"},{"name":"cblB methylmalonic acidemia","type":"related"},{"name":"cobalamin A disease","type":"exact"},{"name":"cobalamin B disease","type":"exact"},{"name":"cobalamin locus A variant","type":"related"},{"name":"cobalamin locus B variant","type":"related"},{"name":"methylmalonic acidemia cblA type","type":"exact"},{"name":"methylmalonic acidemia, cblA type","type":"exact"},{"name":"methylmalonic aciduria cblA type","type":"exact"},{"name":"methylmalonic aciduria, cblA type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive due to a defect in synthesis of adenosylcobalamin cb1A type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive due to a defect in synthesis of adenosylcobalamin cblA type","type":"exact"},{"name":"methylmalonic aciduria, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin, cblA complementation type","type":"related"},{"name":"methylmalonic aciduria, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin, cblA type","type":"related"},{"name":"vitamin B12-responsive methylmalonic acidemia type cblA","type":"exact"},{"name":"vitamin B12-responsive methylmalonic aciduria type cblA","type":"exact"}],"termid":"MONDO:0009613","xrefs":{"Monarch":{"xref_id":"0009613"}}}


id: MONDO:0004467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign teratoma that arises from the stomach.","definition_xrefs":["NCIT:C5260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric teratoma","termid":"MONDO:0003513"},{"relation_name":"is_a","term_name":"mature teratoma","termid":"MONDO:0003517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"mature gastric teratoma","secondary_identifiers":["DOID:8118","MEDGEN:233165","UMLS:C1334635"],"synonyms":[{"name":"mature gastric teratoma","type":"exact"},{"name":"mature teratoma of stomach","type":"exact"},{"name":"mature teratoma of the stomach","type":"exact"},{"name":"stomach mature teratoma","type":"exact"}],"termid":"MONDO:0004467","xrefs":{"Monarch":{"xref_id":"0004467"}}}


id: PBO:0090711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamidase Pnc1","termid":"PBO:0090711"}


id: MONDO:0018726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency due to a complement cascade component deficiency (obsolete MONDO:0018726)","termid":"MONDO:0018726","xrefs":{"Monarch":{"xref_id":"0018726"}}}


id: GO:0002577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"regulates","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation","termid":"GO:0002577"}


id: PBO:0081002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 40","termid":"PBO:0081002"}


id: GO:0071855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuropeptide receptor.","definition_xrefs":["GOC:kmv","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neuropeptide receptor binding","termid":"GO:0071855"}


id: GO:0033429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"CGU codon-amino acid adaptor activity","synonyms":[{"name":"CGT codon-amino acid adaptor activity","type":"exact"},{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033429"}


id: PBO:0062403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 26 pseudogene","termid":"PBO:0062403"}


id: MONDO:0016056
data:
  {"annotated_genes":["SJAG_01082","SJAG_01293","SJAG_03617","SJAG_03891","SJAG_03161","SJAG_02737","SJAG_04699","SJAG_04259","SJAG_04070","SJAG_05245","SJAG_00773","SJAG_00768"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054593"},{"annotations":[84879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054716"},{"annotations":[85791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054761"},{"annotations":[85815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054804"},{"annotations":[85816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054806"},{"annotations":[86185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032583"},{"annotations":[86153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030339"},{"annotations":[85544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031060"},{"annotations":[85503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011488"},{"annotations":[85406,85407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859342"},{"annotations":[85058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011437"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly","termid":"MONDO:0001149"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00768":null,"SJAG_00773":null,"SJAG_01082":null,"SJAG_01293":null,"SJAG_02737":null,"SJAG_03161":null,"SJAG_03617":null,"SJAG_03891":null,"SJAG_04070":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_05245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"isolated congenital microcephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:3603","Orphanet:199642","UMLS:C0025958","MEDGEN:44422","DOID:0070297","MedDRA:10027534"],"synonyms":[{"name":"microcephaly, primary","type":"exact"},{"name":"primary microcephaly","type":"exact"},{"name":"true microcephaly","type":"exact"}],"termid":"MONDO:0016056","terms_by_termid":{"MONDO:0011437":null,"MONDO:0011488":null,"MONDO:0030339":null,"MONDO:0031060":null,"MONDO:0032583":null,"MONDO:0054593":null,"MONDO:0054716":null,"MONDO:0054761":null,"MONDO:0054804":null,"MONDO:0054806":null,"MONDO:0859342":null},"xrefs":{"Monarch":{"xref_id":"0016056"}}}


id: GO:0008775
data:
  {"annotated_genes":["SJAG_02769","SJAG_02985"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75135,76609],"is_not":false,"summary":null,"term":"GO:0008775"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + acetate = a fatty acid anion + acetyl-CoA.","definition_xrefs":["EC:2.8.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"acetate CoA-transferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ACECOATRANS-RXN","Reactome:R-HSA-2066788","UM-BBD_enzymeID:r0012","RHEA:13381"],"synonyms":[{"name":"acetate coenzyme A-transferase activity","type":"related"},{"name":"acetyl-CoA:acetoacetate CoA transferase activity","type":"related"},{"name":"acyl-CoA:acetate CoA-transferase activity","type":"related"},{"name":"butyryl CoA:acetate CoA transferase activity","type":"related"},{"name":"butyryl coenzyme A transferase activity","type":"related"},{"name":"succinyl-CoA:acetate CoA transferase activity","type":"related"}],"termid":"GO:0008775","terms_by_termid":{"GO:0008775":null}}


id: PBO:0038502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 11","termid":"PBO:0038502"}


id: MONDO:0060641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without seizures and gait abnormalities","secondary_identifiers":["MEDGEN:1645968","OMIM:617864","UMLS:C4693391"],"synonyms":[{"name":"NEDSGA","type":"related"},{"name":"neurodevelopmental disorder with or without seizures and gait abnormalities","type":"exact"}],"termid":"MONDO:0060641","xrefs":{"Monarch":{"xref_id":"0060641"}}}


id: GO:0090629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the synthesis of DNA from a template strand in a net 3' to 5' direction is started.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"lagging strand elongation","termid":"GO:0006273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"lagging strand initiation","termid":"GO:0090629"}


id: PBO:0028915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_heavy_metal_stress","termid":"PBO:0028915"}


id: MONDO:0016063
data:
  {"annotated_genes":["SJAG_04206","SJAG_02426","SJAG_04394","SJAG_02539","SJAG_03153","SJAG_03131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008021"},{"annotations":[85041,85040,85042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014048"},{"annotations":[85599,85598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014802"}]},"cv_name":"mondo","definition":"A genodermatosis characterized by the presence of multiple hamartomas in various tissues and an increased risk for malignancies of the breast, thyroid, endometrium, kidney and colorectum. When CS is accompanied by germline PTEN mutations, it belongs to the PTEN hamartoma tumor syndrome (PHTS) group.","definition_xrefs":["Orphanet:201"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"},{"relation_name":"excluded_subClassOf","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"excluded_subClassOf","term_name":"PTEN hamartoma tumor syndrome","termid":"MONDO:0017623"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02426":null,"SJAG_02539":null,"SJAG_03131":null,"SJAG_03153":null,"SJAG_04206":null,"SJAG_04394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"Cowden disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200918","UMLS:C0018553","MEDGEN:5420","GARD:6202","DOID:6457","MedDRA:10051906","NCIT:C3076","MESH:D006223","OMIMPS:158350","NCIT:C8419","SCTID:58037000"],"synonyms":[{"name":"CD","type":"related"},{"name":"Cowden disease","type":"exact"},{"name":"Cowden syndrome","type":"exact"},{"name":"Cowden's disease","type":"exact"},{"name":"MHAM","type":"related"},{"name":"dysplastic gangliocytoma of cerebellum","type":"related"},{"name":"multiple hamartoma syndrome","type":"exact"}],"termid":"MONDO:0016063","terms_by_termid":{"MONDO:0008021":null,"MONDO:0014048":null,"MONDO:0014802":null},"xrefs":{"Monarch":{"xref_id":"0016063"}}}


id: PBO:0054643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2048","termid":"PBO:0054643"}


id: GO:0005311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (dicarboxylate or tricarboxylate)(out) + Na+(out) = (dicarboxylate or tricarboxylate)(in) + Na+(in).","definition_xrefs":["TC:2.A.47.1.5"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:dicarboxylate/tricarboxylate symporter activity (obsolete GO:0005311)","synonyms":[{"name":"sodium:dicarboxylate/tricarboxylate cotransporter activity","type":"broad"},{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"exact"}],"termid":"GO:0005311"}


id: PBO:0065916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGEF1 pseudogene 2","termid":"PBO:0065916"}


id: GO:0099146
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic density membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic density membrane (obsolete GO:0099146)","synonyms":[{"name":"intrinsic to postsynaptic specialization membrane","type":"narrow"}],"termid":"GO:0099146"}


id: MONDO:0957215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 20","secondary_identifiers":["DOID:0081352","OMIM:620310","MEDGEN:1841029","UMLS:C5830393"],"termid":"MONDO:0957215","xrefs":{"Monarch":{"xref_id":"0957215"}}}


id: FYPO:0000377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of apoptosis is increased. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["PomBase:mah","GO:0006915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased frequency of apoptosis","synonyms":[{"name":"apoptosis: increased","type":"related"},{"name":"increased apoptosis","type":"exact"},{"name":"increased apoptotic frequency","type":"exact"}],"termid":"FYPO:0000377"}


id: PBO:0078364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (TTC) 8-2","termid":"PBO:0078364"}


id: MONDO:0032869
data:
  {"annotated_genes":["SJAG_07003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86668],"is_not":false,"summary":null,"term":"MONDO:0032869"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":1,"genes_by_uniquename":{"SJAG_07003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 5 (ATP synthase) deficiency, nuclear type 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618683","UMLS:C5231461","DOID:0111749","MEDGEN:1684729","GARD:18673"],"synonyms":[{"name":"MC5DN6","type":"related"},{"name":"MITOCHONDRIAL COMPLEX V (ATP SYNTHASE) DEFICIENCY, NUCLEAR TYPE 6","type":"related"}],"termid":"MONDO:0032869","terms_by_termid":{"MONDO:0032869":null},"xrefs":{"Monarch":{"xref_id":"0032869"}}}


id: GO:0031603
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The core complex of a proteasome located in the cytosol of a cell.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex","termid":"GO:0005839"},{"relation_name":"part_of","term_name":"cytosolic proteasome complex","termid":"GO:0031597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005829"],"is_obsolete":false,"name":"cytosolic proteasome core complex","termid":"GO:0031603"}


id: GO:0140807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamyl-[protein] + NAD+ = 5-O-(ADP-D-ribosyl)-L-glutamyl-[protein] + nicotinamide.","definition_xrefs":["PMID:25043379","PMID:19764761","RHEA:58224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein mono-ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NAD+-protein-glutamate ADP-ribosyltransferase activity","termid":"GO:0140807"}


id: PBO:0081371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 209, pseudogene","termid":"PBO:0081371"}


id: PBO:0006981
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative Regulator of Condensin","termid":"PBO:0006981"}


id: MONDO:0010894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monogenic diabetes caused by inactivating mutation(s) in the gene HNF1A, encoding hepatocyte nuclear factor 1-alpha.","definition_xrefs":["NCIT:C129742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0019254","MONDO:0005015","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 3","secondary_identifiers":["MESH:C563933","GARD:10658","UMLS:C1838100","OMIM:600496","MEDGEN:324942","SCTID:609570008","NANDO:2201071","DOID:0111102"],"synonyms":[{"name":"HNF1A maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"HNF1A-associated monogenic diabetes","type":"exact"},{"name":"MODY hepatocyte nuclear factor-1-alpha related","type":"related"},{"name":"MODY type 3","type":"exact"},{"name":"MODY, type 3","type":"related"},{"name":"MODY, type III","type":"exact"},{"name":"MODY3","type":"exact"},{"name":"diabetes mellitus MODY type 3","type":"related"},{"name":"hepatocyte nuclear Factor 1-Alpha-associated monogenic diabetes","type":"exact"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in HNF1A","type":"exact"},{"name":"maturity-onset diabetes of the young type 3","type":"exact"},{"name":"maturity-onset diabetes of the young, type 3","type":"related"},{"name":"type 3 maturity-onset diabetes of the young","type":"related"}],"termid":"MONDO:0010894","xrefs":{"Monarch":{"xref_id":"0010894"}}}


id: MONDO:0006859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or low malignant potential cystic epithelial neoplasm composed of cells which contain intracytoplasmic mucin. It may arise from the ovary, pancreas, appendix, and lung.","definition_xrefs":["NCIT:C2973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenoma","termid":"MONDO:0002369"},{"relation_name":"is_a","term_name":"mucinous neoplasm","termid":"MONDO:0024338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucinous cystadenoma","secondary_identifiers":["UMLS:C0010635","MESH:D018291","MEDGEN:8222","EFO:1001048","ICDO:8470/0","ICDO:8480/0"],"synonyms":[{"name":"adenoma, mucinous, benign","type":"exact"},{"name":"mucinous adenoma","type":"exact"},{"name":"mucinous cystadenoma","type":"exact"},{"name":"mucinous cystoma","type":"exact"},{"name":"pseudomucinous cystadenoma","type":"exact"}],"termid":"MONDO:0006859","xrefs":{"Monarch":{"xref_id":"0006859"}}}


id: FYPO:0006831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum biogenesis begins later than normal.","definition_xrefs":["GO:0031671","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000032","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of primary cell septum biogenesis","synonyms":[{"name":"delayed onset of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"delayed onset of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"delayed onset of primary cell septum formation","type":"exact"},{"name":"delayed onset of primary septum biogenesis","type":"exact"},{"name":"delayed onset of primary septum synthesis","type":"related"},{"name":"delayed primary cell septum biogenesis","type":"exact"}],"termid":"FYPO:0006831"}


id: PBO:0002520
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.3.1","termid":"PBO:0002520"}


id: PBO:0043448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 9","termid":"PBO:0043448"}


id: PBO:0002396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial splicing suppressor Mss51 (predicted)","termid":"PBO:0002396"}


id: PBO:0000875
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplicated in S. pombe","termid":"PBO:0000875"}


id: GO:0006789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bilirubin monoglucuronide or bilirubin diglucuronide, water-soluble derivatives of bilirubin.","definition_xrefs":["DOI:10.1016/0305-0491(80)90243-6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound catabolic process","termid":"GO:0006787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"bilirubin conjugation","termid":"GO:0006789"}


id: GO:0072754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a purvalanol A stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to purine-containing compound","termid":"GO:0071415"},{"relation_name":"is_a","term_name":"response to purvalanol A","termid":"GO:1901560"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to purvalanol A","termid":"GO:0072754"}


id: GO:0030937
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XVII) chains; type XVII collagen triple helices span the plasma membrane and associate with hemidesmosomes and the basal lamina where they bind laminin.","definition_xrefs":["PMID:19693541","ISBN:0721639976","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane collagen trimer","termid":"GO:0030936"},{"relation_name":"is_a","term_name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"},{"relation_name":"is_a","term_name":"hemidesmosome associated protein complex","termid":"GO:0098733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"collagen type XVII trimer","termid":"GO:0030937"}


id: PBO:0066995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 298","termid":"PBO:0066995"}


id: PBO:0089882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix import factor Mix23","termid":"PBO:0089882"}


id: PR:Q9Y7I8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zuo1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7I8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zuotin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.01c","synonyms":[{"name":"DnaJ-related protein zuo1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"J protein zuo1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-zuo1","type":"exact"},{"name":"ribosome-associated complex subunit zuo1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7I8"}


id: MONDO:0010847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 4 (SCA4) is a very rare progressive and untreatable subtype of type I autosomal dominant cerebellar ataxia (ADCA type I) characterized by ataxia with sensory neuropathy.","definition_xrefs":["Orphanet:98765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 4","secondary_identifiers":["UMLS:C0752122","icd11.foundation:1686006145","MEDGEN:199815","DOID:0050957","GARD:9970","OMIM:600223","SCTID:715755008"],"synonyms":[{"name":"SCA4","type":"exact"},{"name":"spinocerebellar ataxia 4","type":"related"},{"name":"spinocerebellar ataxia autosomal dominant with sensory axonal neuropathy","type":"related"},{"name":"spinocerebellar ataxia, autosomal dominant, with sensory axonal neuropathy","type":"related"}],"termid":"MONDO:0010847","xrefs":{"Monarch":{"xref_id":"0010847"}}}


id: PBO:0001054
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional enzyme","termid":"PBO:0001054"}


id: MONDO:0004486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenomyoma that arises from the cervix and is characterized by the presence of endocervical mucinous glands and a smooth muscle cell component. There is no atypia or significant mitotic activity present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical adenomyoma","termid":"MONDO:0003238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocervical type cervical adenomyoma","secondary_identifiers":["NCIT:C40232","DOID:8177","UMLS:C1516405","MEDGEN:275706"],"synonyms":[{"name":"cervical adenomyoma, endocervical type","type":"exact"}],"termid":"MONDO:0004486","xrefs":{"Monarch":{"xref_id":"0004486"}}}


id: PBO:0071501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 4","termid":"PBO:0071501"}


id: PBO:0056080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member L","termid":"PBO:0056080"}


id: PBO:0000465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial peptide chain release factor (predicted)","termid":"PBO:0000465"}


id: PBO:0042056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 117","termid":"PBO:0042056"}


id: PBO:0005468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase Rrg1 (predicted)","termid":"PBO:0005468"}


id: GO:0019745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentacyclic triterpenoid compounds, terpenoids with six isoprene units and 5 carbon rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid biosynthetic process","termid":"GO:0016104"},{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pentacyclic triterpenoid biosynthetic process","synonyms":[{"name":"pentacyclic triterpenoid anabolism","type":"exact"},{"name":"pentacyclic triterpenoid biosynthesis","type":"exact"},{"name":"pentacyclic triterpenoid formation","type":"exact"},{"name":"pentacyclic triterpenoid synthesis","type":"exact"}],"termid":"GO:0019745"}


id: GO:0047177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkyl-2-lyso-sn-glycero-3-phosphoethanolamine + 1-alkyl-2-arachidonyl-sn-glycero-3-phosphocholine = 1-alkyl-2-lyso-sn-glycero-3-phosphocholine + 1-alkyl-2-arachidonyl-sn-glycero-3-phosphoethanolamine.","definition_xrefs":["MetaCyc:2.3.1.147-RXN","EC:2.3.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"glycerophospholipid arachidonoyl-transferase (CoA-independent) activity","secondary_identifiers":["RHEA:15409"],"synonyms":[{"name":"1-organyl-2-arachidonoyl-sn-glycero-3-phosphocholine:1-organyl-2-lyso-sn-glycero-3-phosphoethanolamine arachidonoyltransferase (CoA-independent)","type":"related"},{"name":"1-organyl-2-arachidonyl-sn-glycero-3-phosphocholine:1-organyl-2-lyso-sn-glycero-3-phosphoethanolamine arachidonoyltransferase (CoA-independent)","type":"related"}],"termid":"GO:0047177"}


id: PBO:0005247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4-like TAF Taf6, SAGA complex subunit","termid":"PBO:0005247"}


id: PBO:0087540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RAVE complex (Rav1p, Rav2p, Skp1p); the RAVE complex associates with the V1 domain of the vacuolar membrane (H+)-ATPase (V-ATPase) and promotes assembly and reassembly of the holoenzyme","termid":"PBO:0087540"}


id: GO:0006074
data:
  {"annotated_genes":["SJAG_04771","SJAG_01255","SJAG_01288","SJAG_04659","SJAG_02222","SJAG_00876","SJAG_04668","SJAG_04462","SJAG_04666","SJAG_00218","SJAG_05285","SJAG_03587","SJAG_01290","SJAG_04483","SJAG_01835","SJAG_01787","SJAG_03705","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[75578,91390,105904,70582,112954,115612,74287,72802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[92216,87308],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[90563,92200,117705,102639,117830,105717,105146],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"1,3-beta-D-glucan metabolic process","type":"broad"},{"name":"1,3-beta-D-glucan metabolism","type":"exact"},{"name":"1,3-beta-glucan metabolic process","type":"broad"},{"name":"beta-1,3 glucan metabolic process","type":"exact"},{"name":"beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0006074","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0109463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR9-2 host gene","termid":"PBO:0109463"}


id: GO:0047834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-threo-aldose + NAD+ = a D-threo-aldono-1,5-lactone + NADH.","definition_xrefs":["MetaCyc:D-THREO-ALDOSE-1-DEHYDROGENASE-RXN","EC:1.1.1.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-threo-aldose 1-dehydrogenase activity","secondary_identifiers":["RHEA:19645"],"synonyms":[{"name":"(2S,3R)-aldose dehydrogenase activity","type":"related"},{"name":"D-threo-aldose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"L-fucose (D-arabinose) dehydrogenase activity","type":"related"},{"name":"L-fucose dehydrogenase activity","type":"related"},{"name":"dehydrogenase, L-fucose","type":"related"}],"termid":"GO:0047834"}


id: GO:0016204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the transfer of information from the cells of a muscle to those of its intended target, thereby identifying the target site.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"muscle attachment","termid":"GO:0016203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"determination of muscle attachment site","termid":"GO:0016204"}


id: PR:000050545
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein gtr2 (Schizosaccharomyces pombe) that is non-covalently bound to GDP.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:27227887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein gtr2 (Schizosaccharomyces pombe)","termid":"PR:000050544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gtr2/GDP+","pombase_gene_id":"SPCC777.05","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein gtr2, GDP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-gtr2/GDP+","type":"exact"},{"name":"gtr2/GDP+","type":"exact"},{"name":"Gtr2/GDP+","type":"exact"}],"termid":"PR:000050545"}


id: GO:0042926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of 3-hydroxyphenylpropionic acid from one side of a membrane to the other.","definition_xrefs":["PMID:9098055","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"3-hydroxyphenylpropionic acid transmembrane transporter activity","synonyms":[{"name":"3-(3-hydroxyphenyl)propionic acid transporter activity","type":"exact"},{"name":"3-hydroxyphenylpropionic acid transporter activity","type":"related"},{"name":"m-hydroxyphenylpropionic acid transporter activity","type":"exact"}],"termid":"GO:0042926"}


id: MONDO:0002782
data:
  {"annotated_genes":["SJAG_01114","SJAG_04522","SJAG_04765","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85170,85171,85173,85172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011444"}]},"cv_name":"mondo","definition":"Injury to any of the cranial nerves or their nuclei in the brain resulting in muscle weakness.","definition_xrefs":["NCIT:C26941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02278":null,"SJAG_04522":null,"SJAG_04765":null},"genotype_count":0,"is_obsolete":false,"name":"cranial nerve palsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0151311","MEDGEN:57717","DOID:3817","EFO:0009489"],"synonyms":[{"name":"cranial nerve palsies","type":"related"},{"name":"cranial nerve palsy","type":"exact"},{"name":"cranial nerve paralysis","type":"exact"}],"termid":"MONDO:0002782","terms_by_termid":{"MONDO:0011444":null},"xrefs":{"Monarch":{"xref_id":"0002782"}}}


id: GO:0009563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an uncellularized nucleus cellularizes and acquires the specialized features of a synergid cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synergid differentiation","synonyms":[{"name":"synergid cell differentiation","type":"exact"}],"termid":"GO:0009563"}


id: PR:Q9UTS5-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein zas1 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UTS5-1.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc finger protein zas1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UTS5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zas1 isoform 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9UTS5-1"],"synonyms":[{"name":"Spom972h-zas1/iso:1","type":"exact"},{"name":"zinc finger protein zas1 isoform zas1B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTS5-1"}


id: MONDO:0021057
data:
  {"annotated_genes":["SJAG_01419","SJAG_02261","SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012041"},{"annotations":[85034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014630"},{"annotations":[86923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044300"}]},"cv_name":"mondo","definition":"An inherited diseases haracterized by the development of adenomas in the rectum and colon; classified into classic FAP and attenuated FAP.","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"is_obsolete":false,"name":"classic or attenuated familial adenomatous polyposis","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"classic or attenuated FAP","type":"exact"},{"name":"classic or attenuated familial adenomatous polyposis","type":"exact"}],"termid":"MONDO:0021057","terms_by_termid":{"MONDO:0012041":null,"MONDO:0014630":null,"MONDO:0044300":null},"xrefs":{"Monarch":{"xref_id":"0021057"}}}


id: SO:0002065
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion of sequence from the SVA family of mobile elements.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobile_element_insertion","termid":"SO:0001837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SVA_insertion","termid":"SO:0002065"}


id: PBO:0056350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 7","termid":"PBO:0056350"}


id: GO:1904814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to chromosome, telomeric region.","definition_xrefs":["GOC:BHF","GOC:nc","GOC:TermGenie","PMID:19487455","GO_REF:0000058","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to chromosome, telomeric region","termid":"GO:0070198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to chromosome, telomeric region","synonyms":[{"name":"regulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"regulation of protein localization to telomere","type":"exact"}],"termid":"GO:1904814"}


id: PBO:0038707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 1","termid":"PBO:0038707"}


id: GO:0000712
data:
  {"annotated_genes":["SJAG_02556","SJAG_02822","SJAG_03567","SJAG_02295","SJAG_03219","SJAG_00623","SJAG_02616","SJAG_00935","SJAG_02465","SJAG_01044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71487,74139,74697,76660,78976,107943,108878,110121,117094,117243],"is_not":false,"summary":null,"term":"GO:0000712"}]},"cv_name":"biological_process","definition":"The cleavage and rejoining of intermediates, such as Holliday junctions, formed during meiotic recombination to produce two intact molecules in which genetic material has been exchanged.","definition_xrefs":["PMID:11733053","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_00935":null,"SJAG_01044":null,"SJAG_02295":null,"SJAG_02465":null,"SJAG_02556":null,"SJAG_02616":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0007049","GO:0140013","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"resolution of meiotic recombination intermediates","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"resolution of meiotic joint molecules as recombinants","type":"narrow"}],"termid":"GO:0000712","terms_by_termid":{"GO:0000712":null}}


id: PBO:0077084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIFA inhibitor","termid":"PBO:0077084"}


id: PBO:0049401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUCA1A neighbor","termid":"PBO:0049401"}


id: PBO:0076146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate receptor 1","termid":"PBO:0076146"}


id: GO:0036023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, in which the anatomical structures of a skeletal limb joint are generated and organized. A skeletal limb joint is the connecting structure between the bones of a limb.","definition_xrefs":["Wikipedia:Joint","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb joint morphogenesis","termid":"GO:0036022"},{"relation_name":"is_a","term_name":"embryonic skeletal joint morphogenesis","termid":"GO:0060272"},{"relation_name":"part_of","term_name":"embryonic limb morphogenesis","termid":"GO:0030326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal limb joint morphogenesis","termid":"GO:0036023"}


id: PBO:0089336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, pyruvate Mpc1","termid":"PBO:0089336"}


id: MONDO:1011237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"microphthalmia, non-human animal","termid":"MONDO:1010324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia, chicken","secondary_identifiers":["OMIA:000649-9031"],"termid":"MONDO:1011237","xrefs":{"Monarch":{"xref_id":"1011237"}}}


id: PBO:0071173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 14","termid":"PBO:0071173"}


id: PBO:0001467
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monomeric","termid":"PBO:0001467"}


id: PBO:0004888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stm1 homolog (predicted)","termid":"PBO:0004888"}


id: MONDO:0044209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of complement activation, lectin pathway.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement deficiency","termid":"MONDO:0003832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"disorder of lectin complement activation pathway","secondary_identifiers":["OMIMPS:614372"],"synonyms":[{"name":"complement activation, lectin pathway disease","type":"exact"},{"name":"disorder of complement activation, lectin pathway","type":"exact"}],"termid":"MONDO:0044209","xrefs":{"Monarch":{"xref_id":"0044209"}}}


id: PBO:0051316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-118 (pseudogene)","termid":"PBO:0051316"}


id: PBO:0082824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved oxidoreductase involved in lipid droplet morphology; mutant shows defects in CPY processing and vacuolar morphology; required for replication of Brome mosaic virus in S. cerevisiae, a model system for studying replication of positive-strand RNA viruses in their natural hosts; homologus to human RDH12 linked to Leber Congenital Amaurosis","termid":"PBO:0082824"}


id: MONDO:0008455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy, segmental","secondary_identifiers":["MESH:C566670","OMIM:183020","UMLS:C1866774","MEDGEN:355801"],"synonyms":[{"name":"spinal muscular atrophy, segmental","type":"exact"}],"termid":"MONDO:0008455","xrefs":{"Monarch":{"xref_id":"0008455"}}}


id: GO:0008980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + propanoate = ADP + propanoyl phosphate.","definition_xrefs":["EC:2.7.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"propionate kinase activity","secondary_identifiers":["RHEA:23148"],"synonyms":[{"name":"ATP:propanoate phosphotransferase activity","type":"exact"},{"name":"PduW","type":"related"},{"name":"TdcD","type":"related"},{"name":"propanoate kinase activity","type":"exact"}],"termid":"GO:0008980"}


id: PBO:0004604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-H homolog Fta3","termid":"PBO:0004604"}


id: CHEBI:46024
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A","termid":"CHEBI:46024"}


id: PBO:0001338
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene name conflict","termid":"PBO:0001338"}


id: PBO:0050670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPA5 pseudogene 1","termid":"PBO:0050670"}


id: PBO:0047184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 201 member B","termid":"PBO:0047184"}


id: PBO:0071690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 22","termid":"PBO:0071690"}


id: MONDO:0000934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the larynx. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C6027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign laryngeal neoplasm","termid":"MONDO:0002354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal leiomyoma","secondary_identifiers":["DOID:10070","MEDGEN:232691","UMLS:C1334370"],"synonyms":[{"name":"laryngeal leiomyoma","type":"exact"},{"name":"larynx leiomyoma","type":"exact"},{"name":"leiomyoma of larynx","type":"exact"},{"name":"leiomyoma of the larynx","type":"exact"}],"termid":"MONDO:0000934","xrefs":{"Monarch":{"xref_id":"0000934"}}}


id: MONDO:0002964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-Langerhans-cell histiocytosis (obsolete MONDO:0002964)","termid":"MONDO:0002964","xrefs":{"Monarch":{"xref_id":"0002964"}}}


id: GO:0047615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: actinomycin + H2O = actinomycinic monolactone.","definition_xrefs":["MetaCyc:ACTINOMYCIN-LACTONASE-RXN","EC:3.1.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"actinomycin lactonase activity","synonyms":[{"name":"actinomycin lactonohydrolase activity","type":"related"}],"termid":"GO:0047615"}


id: PBO:0080633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 82 pseudogene 1","termid":"PBO:0080633"}


id: PBO:0004082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, involved in ribosome biogenesis (predicted)","termid":"PBO:0004082"}


id: GO:0048263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the identity of part of an organism or organ where those parts are of the type that occur in the dorsal region. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"},{"relation_name":"part_of","term_name":"determination of dorsal/ventral asymmetry","termid":"GO:0048262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of dorsal identity","synonyms":[{"name":"determination of adaxial identity","type":"related"}],"termid":"GO:0048263"}


id: FYPO:0003359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to myriocin. Cells stop growing (and may die) at a concentration of myriocin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to myriocin during vegetative growth","synonyms":[{"name":"hypersensitive to myriocin during vegetative growth","type":"exact"},{"name":"sensitive to myriocin during mitotic cell cycle","type":"related"},{"name":"sensitivity to chemicals interfering with lipids during vegetative growth","type":"broad"}],"termid":"FYPO:0003359"}


id: MONDO:0017738
data:
  {"annotated_genes":["SJAG_03824","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85029,85028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"lysosomal glycogen storage disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:309337","MEDGEN:1842699","GARD:21333","ICD10CM:E74.0","UMLS:C5681077"],"termid":"MONDO:0017738","terms_by_termid":{"MONDO:0009290":null},"xrefs":{"Monarch":{"xref_id":"0017738"}}}


id: GO:1901451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to benzene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to benzene","termid":"GO:1901423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to benzene","termid":"GO:1901451"}


id: MOD:01106
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N-formyl-L-tryptophan.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formyl-L-tryptophan","synonyms":[{"name":"formyl tryptophanyl","type":"exact"}],"termid":"MOD:01106"}


id: PBO:0053772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1017","termid":"PBO:0053772"}


id: GO:0052050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other organism by a type IV secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance secreted by type IV secretion system (obsolete GO:0052050)","termid":"GO:0052050"}


id: PBO:0109813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Mdm31, mitochondrion inheritance factor, interacts with ERMES","termid":"PBO:0109813"}


id: GO:0007341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm.","definition_xrefs":["PMID:21755679","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration of zona pellucida","termid":"GO:0007341"}


id: PBO:0001931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome c oxidase assembly Cox16 (predicted)","termid":"PBO:0001931"}


id: PBO:0081363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF197 antisense RNA 1","termid":"PBO:0081363"}


id: GO:0047245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosaminyldiphosphoundecaprenol + UDP-D-glucose = beta-D-glucosyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenol + UDP.","definition_xrefs":["EC:2.4.1.188","MetaCyc:2.4.1.188-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acetylglucosaminyldiphosphoundecaprenol glucosyltransferase activity","secondary_identifiers":["RHEA:20952"],"synonyms":[{"name":"UDP-D-glucose:N-acetylglucosaminyl pyrophosphorylundecaprenol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-acetyl-D-glucosaminyldiphosphoundecaprenol 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:N-acetyl-D-glucosaminyldiphosphoundecaprenol 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-acetylglucosaminylpyrophosphorylundecaprenol glucosyltransferase activity","type":"related"}],"termid":"GO:0047245"}


id: MONDO:0800319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration","termid":"MONDO:0004580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone dystrophy 5, X-linked","secondary_identifiers":["UMLS:C3887937","MEDGEN:854645"],"synonyms":[{"name":"COD5","type":"exact"}],"termid":"MONDO:0800319","xrefs":{"Monarch":{"xref_id":"0800319"}}}


id: PBO:0001176
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.11.-","termid":"PBO:0001176"}


id: PBO:0066510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X6","termid":"PBO:0066510"}


id: PBO:0027866
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0027866"}


id: MONDO:1010975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatic encephalopathy that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic encephalopathy, non-human animal","termid":"MONDO:1010230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic encephalopathy, sheep","secondary_identifiers":["OMIA:000453-9940"],"termid":"MONDO:1010975","xrefs":{"Monarch":{"xref_id":"1010975"}}}


id: PBO:0082470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calmodulin-dependent protein kinase; may play a role in stress response, many Ca++/calmodulin dependent phosphorylation substrates demonstrated in vitro, amino acid sequence similar to mammalian Cam Kinase II; CMK1 has a paralog, CMK2, that arose from the whole genome duplication","termid":"PBO:0082470"}


id: PBO:0048633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 1 pseudogene 1","termid":"PBO:0048633"}


id: MONDO:1011222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal detachment that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal detachment, non-human animal","termid":"MONDO:1010321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal detachment, domestic cat","secondary_identifiers":["OMIA:000275-9685"],"termid":"MONDO:1011222","xrefs":{"Monarch":{"xref_id":"1011222"}}}


id: PBO:0063847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PILR alpha associated neural protein","termid":"PBO:0063847"}


id: PBO:0076087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STT3 oligosaccharyltransferase complex catalytic subunit A","termid":"PBO:0076087"}


id: FYPO:0003506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing copper ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on copper","synonyms":[{"name":"normal cell population growth in presence of copper","type":"exact"},{"name":"normal cell population growth on copper","type":"exact"},{"name":"normal cell population growth on copper ion","type":"exact"},{"name":"normal cellular response to copper","type":"related"},{"name":"normal growth on copper ions","type":"exact"},{"name":"normal vegetative cell population growth on copper","type":"exact"}],"termid":"FYPO:0003506"}


id: GO:0042405
data:
  {"annotated_genes":["SJAG_01186","SJAG_03745","SJAG_04187","SJAG_04140","SJAG_01408","SJAG_00302","SJAG_04055","SJAG_00335","SJAG_00436","SJAG_03161","SJAG_04855","SJAG_03300","SJAG_03048","SJAG_04645","SJAG_01805","SJAG_01374","SJAG_00082","SJAG_01837","SJAG_04601","SJAG_00471","SJAG_00178","SJAG_03543","SJAG_04768"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115280,102148,89778,92033,104794,112390,115281,112389,102069,103997,104090,110986,116456,90742,87281,98838,105182,111838,105547,112388,88784,114682,93588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140602"}]},"cv_name":"cellular_component","definition":"An intranuclear focus at which aggregated proteins have been sequestered.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00178":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00436":null,"SJAG_00471":null,"SJAG_01186":null,"SJAG_01374":null,"SJAG_01408":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03300":null,"SJAG_03543":null,"SJAG_03745":null,"SJAG_04055":null,"SJAG_04140":null,"SJAG_04187":null,"SJAG_04601":null,"SJAG_04645":null,"SJAG_04768":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear inclusion body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042405","terms_by_termid":{"GO:0140602":null}}


id: GO:0042703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclic, physiologic discharge through the vagina of blood and endometrial tissues from the nonpregnant uterus.","definition_xrefs":["GOC:curators","PMID:8693059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menstrual cycle phase","termid":"GO:0022601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menstruation","secondary_identifiers":["Wikipedia:Menstruation"],"termid":"GO:0042703"}


id: PBO:0087257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; involved in sphingolipid-mediated signaling pathway that controls endocytosis; activates Ypk1p and Ypk2p, components of signaling cascade required for maintenance of cell wall integrity; contains a PH-like domain; redundant with Pkh2p; PKH1 has a paralog, PKH2, that arose from the whole genome duplication","termid":"PBO:0087257"}


id: PBO:0026946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sunitinib","termid":"PBO:0026946"}


id: PBO:0058218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4509-2","termid":"PBO:0058218"}


id: PR:U3H041
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.02c gene.","definition_xrefs":["UniProtKB:U3H041","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase SPBPB21E7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.02c","synonyms":[{"name":"Spom972h-SPBPB21E7.02c","type":"exact"}],"termid":"PR:U3H041"}


id: PBO:0001741
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of leptomycin B","termid":"PBO:0001741"}


id: GO:0002905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mature B cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"regulates","term_name":"mature B cell apoptotic process","termid":"GO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mature B cell apoptotic process","synonyms":[{"name":"regulation of mature B cell apoptosis","type":"narrow"}],"termid":"GO:0002905"}


id: PBO:0080783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 3","termid":"PBO:0080783"}


id: GO:0016236
data:
  {"annotated_genes":["SJAG_01561","SJAG_04496","SJAG_01876","SJAG_05017","SJAG_02640","SJAG_02433","SJAG_02539","SJAG_00355","SJAG_00763","SJAG_01783","SJAG_01367","SJAG_04294","SJAG_00004","SJAG_00053","SJAG_01251","SJAG_02414","SJAG_04991","SJAG_01283","SJAG_01135","SJAG_00059","SJAG_01722","SJAG_04435","SJAG_04860","SJAG_03435","SJAG_02723","SJAG_02655","SJAG_03100","SJAG_02525","SJAG_04021","SJAG_00974","SJAG_00380","SJAG_04837","SJAG_03345","SJAG_00820","SJAG_00114","SJAG_02852","SJAG_01382","SJAG_03136","SJAG_00645","SJAG_03467","SJAG_04232","SJAG_04219","SJAG_00079","SJAG_01467","SJAG_06309","SJAG_00850","SJAG_05261","SJAG_05289","SJAG_04552","SJAG_03718","SJAG_04963","SJAG_02100","SJAG_04655","SJAG_00732","SJAG_03170","SJAG_04502","SJAG_01073","SJAG_01716","SJAG_04023","SJAG_01415","SJAG_00029","SJAG_00115","SJAG_02441","SJAG_03851","SJAG_02699","SJAG_01274"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75795,76990,88001,88455,90796,93330,97106,98910,102328,103532,104700,104768,109621,110070,111311,114954],"is_not":false,"summary":null,"term":"GO:0016236"},{"annotations":[76700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035973"},{"annotations":[70553,76456,78567,60099,78232,79381,79526,80183,71875,72409,79504,94419,103381,72066,73052,104403,71970,76701,92706,70213,71271],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000045"},{"annotations":[70215,75322,71878],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097352"},{"annotations":[94420],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[71617,73267,78569,79602,72848,71880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[92708,72873,71971,73053,76457,99783,60431,76702,79527,110455,72333,79758,115016,79382,94423,76688,94763,89759,70214,114327,72410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000423"},{"annotations":[106451],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0016242"},{"annotations":[78564,99203,73261,79596,71611,108360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044804"},{"annotations":[77038,71616,72846,79601,79506,71272,73266,71972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000425"},{"annotations":[79525,71969,79380,71873,73051,72872,76687,76699,74199,70066,79757,79503,72332,72843,73159,71134,72408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"},{"annotations":[108361,108451],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000786"},{"annotations":[97420],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[75097,106060],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0016239"},{"annotations":[89309],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140501"},{"annotations":[79529,79509,104174,108362,72412,79760,76689,110456,72875,90204,79384,77899,99204,72847,74313,116387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061709"},{"annotations":[79502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034517"}]},"cv_name":"biological_process","definition":"The autophagic process that proceeds via the formation of an autophagosome.","definition_xrefs":["PMID:24366339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":66,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00029":null,"SJAG_00053":null,"SJAG_00059":null,"SJAG_00079":null,"SJAG_00114":null,"SJAG_00115":null,"SJAG_00355":null,"SJAG_00380":null,"SJAG_00645":null,"SJAG_00732":null,"SJAG_00763":null,"SJAG_00820":null,"SJAG_00850":null,"SJAG_00974":null,"SJAG_01073":null,"SJAG_01135":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01367":null,"SJAG_01382":null,"SJAG_01415":null,"SJAG_01467":null,"SJAG_01561":null,"SJAG_01716":null,"SJAG_01722":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02100":null,"SJAG_02414":null,"SJAG_02433":null,"SJAG_02441":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02699":null,"SJAG_02723":null,"SJAG_02852":null,"SJAG_03100":null,"SJAG_03136":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03435":null,"SJAG_03467":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04294":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04552":null,"SJAG_04655":null,"SJAG_04837":null,"SJAG_04860":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05017":null,"SJAG_05261":null,"SJAG_05289":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"macroautophagy","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5205685","Reactome:R-HSA-8934903","GO:0034262","Reactome:R-HSA-1632852"],"synonyms":[{"name":"autophagy","type":"broad"},{"name":"selective autophagy","type":"narrow"}],"termid":"GO:0016236","terms_by_termid":{"GO:0000045":null,"GO:0000423":null,"GO:0000425":null,"GO:0016236":null,"GO:0016239":null,"GO:0016240":null,"GO:0016242":null,"GO:0034517":null,"GO:0034727":null,"GO:0035973":null,"GO:0044804":null,"GO:0061709":null,"GO:0061723":null,"GO:0097352":null,"GO:0140501":null,"GO:1901098":null,"GO:2000786":null}}


id: GO:2000580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATP-dependent microtubule motor activity, plus-end-directed.","definition_xrefs":["GOC:kmv","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule motor activity, plus-end-directed (obsolete GO:2000580)","synonyms":[{"name":"regulation of ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"regulation of kinesin ATP phosphohydrolase (plus-end-directed)","type":"exact"},{"name":"regulation of kinesin activity","type":"related"},{"name":"regulation of plus-end-directed kinesin ATPase activity","type":"exact"},{"name":"regulation of plus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000580"}


id: PATO:0000901
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000901 backcross sterile (obsolete PATO:0000901)","synonyms":[{"name":"backcross infertile","type":"related"}],"termid":"PATO:0000901"}


id: PBO:0049275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSK3B interacting protein","termid":"PBO:0049275"}


id: MONDO:0006338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian germ cell tumor (obsolete MONDO:0006338)","termid":"MONDO:0006338","xrefs":{"Monarch":{"xref_id":"0006338"}}}


id: MONDO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transformation of chronic lymphocytic leukemia into aggressive non-Hodgkin's lymphoma, usually diffuse large B-cell lymphoma (immunoblastic or centroblastic variant). Occasional cases of transformation to Hodgkin's lymphoma have also been described, particularly in patients treated with purine nucleotide analogs. Molecular genetic studies suggest that in approximately half of the cases, the lymphoma is clonally related to the underlying chronic lymphocytic leukemia, whereas in the remaining cases the lymphoma probably represents a secondary, unrelated neoplasm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"B-cell chronic lymphocytic leukemia","termid":"MONDO:0004948"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"},{"relation_name":"is_a","term_name":"secondary neoplasm","termid":"MONDO:0024882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Richter syndrome","secondary_identifiers":["icd11.foundation:1736108343","MEDGEN:91159","NCIT:C35424","SCTID:277550009","UMLS:C0349631","GARD:7578","DOID:1703"],"synonyms":[{"name":"Richter syndrome","type":"exact"},{"name":"Richter transformation","type":"exact"},{"name":"Richter's syndrome","type":"exact"},{"name":"Richter's transformation","type":"exact"}],"termid":"MONDO:0002083","xrefs":{"Monarch":{"xref_id":"0002083"}}}


id: PBO:0047515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEV transcription factor, ETS family member","termid":"PBO:0047515"}


id: MONDO:0023208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fuqua Berkovitz syndrome","termid":"MONDO:0023208","xrefs":{"Monarch":{"xref_id":"0023208"}}}


id: GO:0120035
data:
  {"annotated_genes":["SJAG_04509","SJAG_00514","SJAG_02379","SJAG_03453","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89656,87685,111159,90641,93278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of plasma membrane bounded cell projections.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"regulates","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasma membrane bounded cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120035","terms_by_termid":{"GO:1902917":null}}


id: GO:0097671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is YDR131C in S. cerevisiae.","definition_xrefs":["GOC:vw","PMID:14747994","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-YDR131C ubiquitin ligase complex","termid":"GO:0097671"}


id: MONDO:0002284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gangliosidosis (obsolete MONDO:0002284)","termid":"MONDO:0002284","xrefs":{"Monarch":{"xref_id":"0002284"}}}


id: MONDO:1012649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of glycogen metabolism that occurs in horses due to a mutation in the GYS1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, non-human animal","termid":"MONDO:1010196"},{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polysaccharide storage myopathy, type 1, horse","secondary_identifiers":["OMIA:001158-9796"],"synonyms":[{"name":"PSSM1","type":"exact"},{"name":"polysaccharide storage myopathy, GYS1-related, horse","type":"exact"}],"termid":"MONDO:1012649","xrefs":{"Monarch":{"xref_id":"1012649"}}}


id: _global:directly_positively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p directly positively regulates q iff p is immediately causally upstream of q, and p positively regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulates","termid":"_global:directly_regulates"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"positively_regulates","termid":"_global:positively_regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulates","secondary_identifiers":["RO:0002629"],"termid":"_global:directly_positively_regulates"}


id: GO:0030946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate. This reaction requires metal ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine phosphatase activity","termid":"GO:0004725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0004721","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"protein tyrosine phosphatase activity, metal-dependent","termid":"GO:0030946"}


id: GO:2000864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estradiol secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"estradiol secretion","termid":"GO:0035938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of estradiol secretion","synonyms":[{"name":"regulation of oestradiol secretion","type":"exact"}],"termid":"GO:2000864"}


id: GO:0019362
data:
  {"annotated_genes":["SJAG_02889","SJAG_02107","SJAG_02369","SJAG_04048","SJAG_02148","SJAG_00461","SJAG_00605","SJAG_01582","SJAG_04263","SJAG_03669","SJAG_06621","SJAG_02696","SJAG_04192","SJAG_02135","SJAG_03903","SJAG_03934","SJAG_04495","SJAG_01500","SJAG_04152","SJAG_05314","SJAG_02154","SJAG_01824","SJAG_02796","SJAG_01566","SJAG_00501","SJAG_02297","SJAG_04693","SJAG_00957","SJAG_02785","SJAG_00409","SJAG_02009","SJAG_03852","SJAG_02191","SJAG_03298","SJAG_02462","SJAG_04467","SJAG_00027","SJAG_01539","SJAG_00070","SJAG_00633","SJAG_01012","SJAG_06622","SJAG_01310","SJAG_01359","SJAG_04362","SJAG_03174","SJAG_00839","SJAG_02945","SJAG_03946","SJAG_02853","SJAG_03091","SJAG_03373","SJAG_03660","SJAG_03828","SJAG_00522","SJAG_02618","SJAG_00685","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94807,105257,77659,103178,97793,105627,109186,105259,109187,105628,105258,109188,116142,98066,109184,109185,103432,94318,109189,109190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[96354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043490"},{"annotations":[112879,70483,90444,90866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[74427,77282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[79937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[72169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[68865,58460,66551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019674"},{"annotations":[72171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006734"},{"annotations":[69875,74305,79640,74541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006116"},{"annotations":[94902,94901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006735"},{"annotations":[70867,79663,77738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[72172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[73639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006739"},{"annotations":[75832,72862],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[103229,66101,89095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046496"},{"annotations":[90445,109409,88807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[67960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006098"},{"annotations":[74298,104149,72896,73580,108225],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[96689,72867,80158,97985,96778],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0009051"},{"annotations":[89479],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[69868],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[75831],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic 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id: PR:O13636
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit TIM50 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12210:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim50 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.01c","secondary_identifiers":["UniProtKB:O13636"],"synonyms":[{"name":"Spom972h-TIMM50","type":"exact"},{"name":"pi044","type":"related"}],"termid":"PR:O13636"}


id: GO:0098718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of serine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine transport","termid":"GO:0032329"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"serine import across plasma membrane","secondary_identifiers":["GO:0061491"],"synonyms":[{"name":"serine import into cell","type":"exact"}],"termid":"GO:0098718"}


id: MONDO:0009081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"deafness, congenital, with total albinism","secondary_identifiers":["MEDGEN:387799","OMIM:220900","MESH:C565646","UMLS:C1857343"],"synonyms":[{"name":"deafness, congenital, with total albinism","type":"exact"}],"termid":"MONDO:0009081","xrefs":{"Monarch":{"xref_id":"0009081"}}}


id: PBO:0041981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 25","termid":"PBO:0041981"}


id: PBO:0045629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 41 (pseudogene)","termid":"PBO:0045629"}


id: PBO:0113497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4G and scaffold protein; subunit of the mRNA cap-binding protein complex (eIF4F) with eIF4E (Cdc33p) and eIF4A (Tif1p/Tif2p); stimulates the ATPase and helicase activities of eIF4A synergistically with eIF4G; required with eIF4E for Ded1p-mediated stimulation of mRNA recruitment during 48S preinitiation complex (PIC) assembly; association with Pab1p mediates poly(A) tail-stimulated translation; role in assembly of PET region in biogenesis of 60S ribosomal subunit","termid":"PBO:0113497"}


id: MONDO:0021971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Baraitser Rodeck garner syndrome (obsolete MONDO:0021971)","termid":"MONDO:0021971","xrefs":{"Monarch":{"xref_id":"0021971"}}}


id: GO:1904995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte adhesion to vascular endothelial cell.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:bc","GO_REF:0000058","GOC:TermGenie","PMID:23897866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"negatively_regulates","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte adhesion to vascular endothelial cell","synonyms":[{"name":"down regulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"down-regulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"downregulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"inhibition of leukocyte adhesion to vascular endothelial cell","type":"narrow"}],"termid":"GO:1904995"}


id: GO:0045174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dehydroascorbate + 2 glutathione = L-ascorbate + glutathione disulfide.","definition_xrefs":["RHEA:24424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione disulfide oxidoreductase activity","termid":"GO:0015038"},{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor","termid":"GO:0016672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491","GO:0015036"],"is_obsolete":false,"name":"glutathione dehydrogenase (ascorbate) activity","secondary_identifiers":["EC:1.8.5.1","Reactome:R-HSA-198813","KEGG_REACTION:R01108","MetaCyc:1.8.5.1-RXN"],"synonyms":[{"name":"DHA reductase activity","type":"related"},{"name":"GDOR","type":"related"},{"name":"dehydroascorbate reductase activity","type":"exact"},{"name":"dehydroascorbic acid reductase activity","type":"related"},{"name":"dehydroascorbic reductase activity","type":"related"},{"name":"glutathione dehydroascorbate reductase activity","type":"related"},{"name":"glutathione:dehydroascorbate oxidoreductase activity","type":"related"},{"name":"glutathione:dehydroascorbic acid oxidoreductase activity","type":"related"}],"termid":"GO:0045174"}


id: GO:1903299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of hexokinase activity.","definition_xrefs":["GOC:TermGenie","PMID:15804508","GOC:mr","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hexokinase activity (obsolete GO:1903299)","synonyms":[{"name":"regulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"regulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"regulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"regulation of hexokinase (phosphorylating)","type":"exact"},{"name":"regulation of hexokinase D","type":"related"},{"name":"regulation of hexokinase type I activity","type":"narrow"},{"name":"regulation of hexokinase type II activity","type":"narrow"},{"name":"regulation of hexokinase type III activity","type":"narrow"},{"name":"regulation of hexokinase type IV","type":"related"},{"name":"regulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"regulation of hexokinase type IV glucokinase activity","type":"exact"}],"termid":"GO:1903299"}


id: GO:0004034
data:
  {"annotated_genes":["SJAG_02951","SJAG_03818"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113512,113513],"is_not":false,"summary":null,"term":"GO:0004034"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose = beta-D-glucose. Also acts on L-arabinose, D-xylose, D-galactose, maltose and lactose.","definition_xrefs":["EC:5.1.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02951":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aldose 1-epimerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ALDOSE-1-EPIMERASE-RXN"],"synonyms":[{"name":"aldose mutarotase activity","type":"related"},{"name":"mutarotase activity","type":"related"}],"termid":"GO:0004034","terms_by_termid":{"GO:0004034":null}}


id: GO:0090505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of one cell sheet over other cells involved in wound healing.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epiboly","termid":"GO:0090504"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epiboly involved in wound healing","termid":"GO:0090505"}


id: GO:0051003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the ligation of two substances via a nitrogen-metal bond, forming a coordination complex.","definition_xrefs":["EC:6.6.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming nitrogen-metal bonds","termid":"GO:0051002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"ligase activity, forming nitrogen-metal bonds, forming coordination complexes","termid":"GO:0051003"}


id: GO:0080116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of glucuronate to the xylan backbone of glucuronoxylan molecule.","definition_xrefs":["PMID:18980649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucuronoxylan glucuronosyltransferase activity","termid":"GO:0080116"}


id: PBO:0111888
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT hook protein","termid":"PBO:0111888"}


id: GO:0031569
data:
  {"annotated_genes":["SJAG_04280","SJAG_04332","SJAG_03602","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94333,95642,98229,115799],"is_not":false,"summary":null,"term":"GO:0031569"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint prior to the G2/M transition of mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"},{"relation_name":"is_a","term_name":"mitotic cell size control checkpoint signaling","termid":"GO:0031567"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03602":null,"SJAG_04280":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0023052","GO:0044772"],"is_obsolete":false,"name":"mitotic G2 cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072453"],"synonyms":[{"name":"G2 cell size control checkpoint","type":"exact"},{"name":"G2/M transition size control checkpoint","type":"exact"},{"name":"mitotic G2 cell size control checkpoint","type":"related"},{"name":"mitotic cell cycle G2/M transition size control checkpoint","type":"exact"},{"name":"signal transduction involved in G2 cell size control checkpoint","type":"related"},{"name":"signal transduction involved in G2/M transition size control checkpoint","type":"related"},{"name":"signal transduction involved in mitotic cell cycle G2/M transition size control checkpoint","type":"related"}],"termid":"GO:0031569","terms_by_termid":{"GO:0031569":null}}


id: FYPO:0003470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mRNA splicing via the spliceosome is increased.","definition_xrefs":["PMID:24298023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"increased RNA splicing","termid":"FYPO:0002916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0000294"],"is_obsolete":false,"name":"increased mRNA splicing, via spliceosome","synonyms":[{"name":"increased mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"increased mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"increased nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"increased splicing","type":"broad"}],"termid":"FYPO:0003470"}


id: FYPO:0004452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a calcineurin-dependent response element (CDRE)-containing promoter is decreased following a calcium ion stimulus.","definition_xrefs":["PMID:25081204","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased transcription from CDRE promoter in response to calcium ion","synonyms":[{"name":"decreased transcription from CDRE promoter in response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CDRE promoter in response to calcium ion during vegetative growth","type":"exact"},{"name":"reduced transcription from CDRE promoter in response to calcium ion","type":"exact"}],"termid":"FYPO:0004452"}


id: PBO:0075747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 72 pseudogene 2","termid":"PBO:0075747"}


id: PBO:0027957
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pyridoxine:NADP_4-dehydrogenase_activity","termid":"PBO:0027957"}


id: MONDO:1012628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of progressive retinal atrophy that occurs in dogs due to a mutation in the RPGR gene and is characterized by normal photoreceptor morphogenesis, after which progressive rod–cone degeneration develops in the peripheral retina, gradually advancing toward the optic disc.","definition_xrefs":["PMID:32176262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked progressive retinal atrophy 1, RPGR-related, dog","secondary_identifiers":["OMIA:000831-9615"],"synonyms":[{"name":"XLPRA1","type":"exact"},{"name":"progressive retinal atrophy, X-linked, type 1, dog","type":"related"}],"termid":"MONDO:1012628","xrefs":{"Monarch":{"xref_id":"1012628"}}}


id: GO:0071890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to bicarbonate ions (CHO3-).","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"bicarbonate binding","synonyms":[{"name":"CHO3- ion binding binding","type":"exact"},{"name":"hydrogencarbonate binding","type":"exact"}],"termid":"GO:0071890"}


id: FYPO:0006236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain a normal (i.e. indistinguishable from wild type) number of monomeric ribosomes (80S monosomes) in the cytosol.","definition_xrefs":["PomBase:mah","PMID:18065650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of macromolecular complex","termid":"FYPO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cytosolic monomeric ribosome level","synonyms":[{"name":"cytosolic monomeric ribosomes present at normal level","type":"exact"},{"name":"normal cytosolic 80S monosome level","type":"exact"},{"name":"normal cytosolic monomeric 80S ribosome level","type":"exact"},{"name":"normal cytosolic monomeric ribosome level during mitotic cell cycle","type":"related"},{"name":"normal cytosolic monomeric ribosome level during vegetative growth","type":"exact"},{"name":"normal cytosolic ribosome level","type":"broad"},{"name":"normal level of cytosolic monomeric ribosomes","type":"exact"}],"termid":"FYPO:0006236"}


id: PBO:0064620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 6 homeobox 2","termid":"PBO:0064620"}


id: GO:0042136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter biosynthetic process (obsolete GO:0042136)","synonyms":[{"name":"neurotransmitter anabolism","type":"exact"},{"name":"neurotransmitter biosynthesis","type":"exact"},{"name":"neurotransmitter biosynthesis and storage","type":"broad"},{"name":"neurotransmitter biosynthetic process and storage","type":"broad"},{"name":"neurotransmitter formation","type":"exact"},{"name":"neurotransmitter synthesis","type":"exact"}],"termid":"GO:0042136"}


id: PBO:0029806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_with_abnormal_shape_and_cells_with_abnormal_shape_(obsolete_FYPO:0002431)","termid":"PBO:0029806"}


id: PBO:0041182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 2","termid":"PBO:0041182"}


id: MONDO:0011421
data:
  {"annotated_genes":["SJAG_01503"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85295],"is_not":false,"summary":null,"term":"MONDO:0011421"}]},"cv_name":"mondo","definition":"Any mitochondrial proton-transporting ATP synthase complex deficiency in which the cause of the disease is a mutation in the ATPAF2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"},{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex V (ATP synthase) deficiency, nuclear type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:477906","DOID:0050768","GARD:18660","OMIM:604273","UMLS:C3276276"],"synonyms":[{"name":"ATPAF2 mitochondrial proton-transporting ATP synthase complex deficiency","type":"exact"},{"name":"Complex 5 mitochondrial respiratory chain deficiency","type":"related"},{"name":"MC5DN1","type":"exact"},{"name":"mitochondrial Complex 5 (ATP synthase) deficiency, Atpaf2 type","type":"related"},{"name":"mitochondrial Complex 5 (ATP synthase) deficiency, nuclear type 1","type":"related"},{"name":"mitochondrial complex V (ATP synthase) deficiency, nuclear type 1","type":"exact"},{"name":"mitochondrial complex V deficiency","type":"broad"},{"name":"mitochondrial proton-transporting ATP synthase complex deficiency caused by mutation in ATPAF2","type":"exact"}],"termid":"MONDO:0011421","terms_by_termid":{"MONDO:0011421":null},"xrefs":{"Monarch":{"xref_id":"0011421"}}}


id: PBO:0068907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 150, pseudogene","termid":"PBO:0068907"}


id: PBO:0060126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 27","termid":"PBO:0060126"}


id: GO:0043535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the migration of the endothelial cells of blood vessels.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell migration","termid":"GO:0010594"},{"relation_name":"regulates","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood vessel endothelial cell migration","termid":"GO:0043535"}


id: MONDO:0007349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial cold autoinflammatory syndrome in which the cause of the disease is a mutation in the NLRP3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cold autoinflammatory syndrome","termid":"MONDO:0018768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial cold autoinflammatory syndrome 1","secondary_identifiers":["MEDGEN:1647324","SCTID:238687000","DOID:0090062","OMIM:120100","UMLS:C4551895","GARD:15051"],"synonyms":[{"name":"Cryopyrin-associated periodic syndrome 1","type":"related"},{"name":"FCAS1","type":"related"},{"name":"Fcas","type":"related"},{"name":"NLRP3 familial cold autoinflammatory syndrome","type":"exact"},{"name":"cold hypersensitivity","type":"related"},{"name":"cold urticaria, familial","type":"related"},{"name":"cold-induced autoinflammatory syndrome, familial","type":"related"},{"name":"familial cold autoinflammatory syndrome 1","type":"exact"},{"name":"familial cold autoinflammatory syndrome caused by mutation in NLRP3","type":"exact"},{"name":"familial cold autoinflammatory syndrome type 1","type":"exact"},{"name":"familial cold inflammatory syndrome 1","type":"exact"}],"termid":"MONDO:0007349","xrefs":{"Monarch":{"xref_id":"0007349"}}}


id: PBO:0082472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calnexin; integral membrane ER chaperone involved in folding and quality control of glycoproteins; chaperone activity is inhibited by Mpd1p, with which Cne1p interacts; 24% identical to mammalian calnexin; Ca+ binding not yet shown in yeast","termid":"PBO:0082472"}


id: MONDO:0054743
data:
  {"annotated_genes":["SJAG_01950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84904],"is_not":false,"summary":null,"term":"MONDO:0054743"}]},"cv_name":"mondo","definition":"Any polycystic kidney disease in which the cause of the disease is a mutation in the ALG8 gene, that presents with or without kidney cysts.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic liver disease","termid":"MONDO:0000447"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0000426","MONDO:0004335"],"is_obsolete":false,"name":"polycystic liver disease 3 with or without kidney cysts","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060976","OMIM:617874","UMLS:C4693472","MEDGEN:1646969"],"synonyms":[{"name":"PCLD3","type":"related"},{"name":"polycystic liver disease 3 with or without kidney cysts","type":"exact"}],"termid":"MONDO:0054743","terms_by_termid":{"MONDO:0054743":null},"xrefs":{"Monarch":{"xref_id":"0054743"}}}


id: PBO:0040927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 2","termid":"PBO:0040927"}


id: MONDO:0015902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Major hypertriglyceridemia comprises a group of endocrine diseases characterized by permanently high levels of triglycerides (TG) in the blood (higher than 4g/L after 12 hours of fasting) and an increased risk of acute pancreatitis, making screening essential.","definition_xrefs":["Orphanet:181425"],"gene_count":0,"genotype_count":0,"name":"obsolete major hypertriglyceridemia (obsolete MONDO:0015902)","termid":"MONDO:0015902","xrefs":{"Monarch":{"xref_id":"0015902"}}}


id: PBO:0077826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member E","termid":"PBO:0077826"}


id: PATO:0001207
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001207 absolute compatability (obsolete PATO:0001207)","termid":"PATO:0001207"}


id: GO:1903839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["GOC:TermGenie","PMID:19575011","GO_REF:0000059","GOC:als"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mRNA 3'-UTR binding (obsolete GO:1903839)","synonyms":[{"name":"activation of mRNA 3' UTR binding","type":"narrow"},{"name":"activation of mRNA 3'-UTR binding","type":"narrow"},{"name":"positive regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"up-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"upregulation of mRNA 3' UTR binding","type":"exact"},{"name":"upregulation of mRNA 3'-UTR binding","type":"exact"}],"termid":"GO:1903839"}


id: PBO:0045973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHBP1 antisense RNA 1","termid":"PBO:0045973"}


id: PBO:0004109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 (predicted)","termid":"PBO:0004109"}


id: GO:0004457
data:
  {"annotated_genes":["SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004458"},{"annotations":[80148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008720"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: lactate + NAD+ = H+ + NADH + pyruvate.","definition_xrefs":["GOC:bf","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03804":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lactate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0004457","terms_by_termid":{"GO:0004458":null,"GO:0008720":null}}


id: PBO:0082615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-coiled protein of unknown function; identified as a high-copy suppressor of a dbp5 mutation; protein abundance increases in response to DNA replication stress","termid":"PBO:0082615"}


id: GO:0072670
data:
  {"annotated_genes":["SJAG_00865","SJAG_04700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75357,118412],"is_not":false,"summary":null,"term":"GO:0072670"}]},"cv_name":"biological_process","definition":"The attachment of a carbonyl group and a threonine to the amino group of the adenine residue immediately 3' of the anticodon, in mitochondrial tRNAs that decode ANN codons (where N is any base).","definition_xrefs":["GOC:mcc","PMID:21183954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA threonylcarbamoyladenosine modification","termid":"GO:0002949"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00865":null,"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0140053","GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial tRNA threonylcarbamoyladenosine modification","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial tRNA t6A modification","type":"exact"}],"termid":"GO:0072670","terms_by_termid":{"GO:0072670":null}}


id: PBO:0080227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitrin","termid":"PBO:0080227"}


id: PBO:0078524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 15","termid":"PBO:0078524"}


id: PBO:0018261
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Fizzy Related","termid":"PBO:0018261"}


id: GO:1902196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isovaleryl-CoA(4-).","definition_xrefs":["PMID:11231285","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"isovaleryl-CoA(4-) metabolic process","termid":"GO:1902195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044248","GO:0008150","GO:0006790","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"isovaleryl-CoA(4-) catabolic process","synonyms":[{"name":"isovaleryl-CoA(4-) breakdown","type":"exact"},{"name":"isovaleryl-CoA(4-) catabolism","type":"exact"},{"name":"isovaleryl-CoA(4-) degradation","type":"exact"}],"termid":"GO:1902196"}


id: GO:0102367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2alpha-hydroxytaxusin + NADPH + O2 + H+ = 2alpha, 7beta-dihydroxytaxusin + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-alpha-hydroxytaxusin 7-beta-hydroxylase activity (obsolete GO:0102367)","termid":"GO:0102367"}


id: PBO:0083559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene PMT1/YDL095W; YDL096C is not essential","termid":"PBO:0083559"}


id: SO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The switch region of immunoglobulin heavy chains; it is involved in the rearrangement of heavy chain DNA leading to the expression of a different immunoglobulin classes from the same B-cell.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S_region","synonyms":[{"name":"INSDC_feature:S_region","type":"exact"},{"name":"S region","type":"exact"}],"termid":"SO:0001836"}


id: GO:0036408
data:
  {"annotated_genes":["SJAG_02165","SJAG_02773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90551,91208],"is_not":false,"summary":null,"term":"GO:0036408"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 14) = CoA + histone H3 N6-acetyl-L-lysine (position 14).","definition_xrefs":["GOC:vw","PMID:19056256","PMID:21289066","PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02165":null,"SJAG_02773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0034212","GO:0016746","GO:0140096","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"histone H3K14 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K14 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K14 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K14 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K14 specific)","type":"exact"}],"termid":"GO:0036408","terms_by_termid":{"GO:0036408":null}}


id: GO:0018396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-lysine to peptidyl-4-hydroxy-L-lysine.","definition_xrefs":["RESID:AA0235"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine hydroxylation to 4-hydroxy-L-lysine (obsolete GO:0018396)","termid":"GO:0018396"}


id: GO:0033307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that generates phytol, (2E,7R,11R)-3,7,11,15-tetramethylhexadec-2-en-1-ol, from derivatives of it without de novo synthesis.","definition_xrefs":["MetaCyc:PWY-5107","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytol biosynthetic process","termid":"GO:0033520"},{"relation_name":"is_a","term_name":"metabolic compound salvage","termid":"GO:0043094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phytol salvage","synonyms":[{"name":"phytol salvage pathway","type":"exact"}],"termid":"GO:0033307"}


id: PBO:0090694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase inhibitor Inh1","termid":"PBO:0090694"}


id: MONDO:0032903
data:
  {"annotated_genes":["SJAG_00875"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86492],"is_not":false,"summary":null,"term":"MONDO:0032903"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00875":null},"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita 4, neurogenic, with agenesis of the corpus callosum","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5231494","DOID:0080980","OMIM:618766","MEDGEN:1684706"],"synonyms":[{"name":"AMCNACC","type":"exact"},{"name":"Zain Syndrome","type":"related"},{"name":"arthrogryposis multiplex congenita, neurogenic, with agenesis of the corpus callosum","type":"exact"}],"termid":"MONDO:0032903","terms_by_termid":{"MONDO:0032903":null},"xrefs":{"Monarch":{"xref_id":"0032903"}}}


id: PBO:0085820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed during diauxic shift and stationary phase, and negatively regulated by glucose; expression is regulated by Msn2p/Msn4p; overexpression slows down progression through meiosis and improves fermentative efficiency; YNR034W-A has a paralog, YCR075W-A, that arose from the whole genome duplication","termid":"PBO:0085820"}


id: GO:0008093
data:
  {"annotated_genes":["SJAG_04077","SJAG_04479","SJAG_04455","SJAG_03596","SJAG_03564","SJAG_05179","SJAG_00397","SJAG_00268","SJAG_00152","SJAG_03673","SJAG_03116","SJAG_02795","SJAG_04498","SJAG_07018","SJAG_03200","SJAG_05196","SJAG_02246","SJAG_02737","SJAG_00700","SJAG_00368","SJAG_00030","SJAG_04558","SJAG_02045","SJAG_01143","SJAG_03264"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91186,97831,99093,104452],"is_not":false,"summary":null,"term":"GO:0008093"},{"annotations":[92388,99130,106004,116743,116831,102219,102760,112100,106393,112562,102538,113738,111664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106006"},{"annotations":[109965,102845,99660,98077,100790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140475"},{"annotations":[80185,102615,112635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106166"}]},"cv_name":"molecular_function","definition":"The binding activity of a protein that brings together a cytoskeletal protein (either a microtubule or actin filament, spindle pole body, or protein directly bound to them) and one or more other molecules, permitting them to function in a coordinated way.","definition_xrefs":["PMID:30323238","GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00152":null,"SJAG_00268":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00700":null,"SJAG_01143":null,"SJAG_02045":null,"SJAG_02246":null,"SJAG_02737":null,"SJAG_02795":null,"SJAG_03116":null,"SJAG_03200":null,"SJAG_03264":null,"SJAG_03564":null,"SJAG_03596":null,"SJAG_03673":null,"SJAG_04077":null,"SJAG_04455":null,"SJAG_04479":null,"SJAG_04498":null,"SJAG_04558":null,"SJAG_05179":null,"SJAG_05196":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"cytoskeletal anchor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytoskeletal adaptor activity","type":"exact"}],"termid":"GO:0008093","terms_by_termid":{"GO:0008093":null,"GO:0106006":null,"GO:0106166":null,"GO:0140475":null}}


id: PBO:0080739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing transcription regulator 1","termid":"PBO:0080739"}


id: PBO:0069816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1102, pseudogene","termid":"PBO:0069816"}


id: PBO:0041474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 54","termid":"PBO:0041474"}


id: PBO:0047208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 220 member B, pseudogene","termid":"PBO:0047208"}


id: PBO:0061269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOVA alternative splicing regulator 2","termid":"PBO:0061269"}


id: GO:0035533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 6 (CCL6).","definition_xrefs":["GOC:bf","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 6 production","termid":"GO:0035531"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 6 production","termid":"GO:0035530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 6 production","secondary_identifiers":["GO:0035537"],"synonyms":[{"name":"positive regulation of CCL6 production","type":"exact"},{"name":"positive regulation of chemokine (C-C motif) ligand 6 secretion","type":"narrow"}],"termid":"GO:0035533"}


id: PATO:0001621
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A turgor which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"turgor","termid":"PATO:0001620"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased turgor","synonyms":[{"name":"low turgor","type":"exact"}],"termid":"PATO:0001621"}


id: PBO:0114640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, sulfur depletion response, Sdr1","termid":"PBO:0114640"}


id: MONDO:0009295
data:
  {"annotated_genes":["SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85479],"is_not":false,"summary":null,"term":"MONDO:0009295"}]},"cv_name":"mondo","definition":"Muscle phosphofructokinase (PFK) deficiency (Tarui's disease), or glycogen storage disease type 7 (GSD7), is a rare form of glycogen storage disease characterized by exertional fatigue and muscular exercise intolerance. It occurs in childhood.","definition_xrefs":["Orphanet:371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"},{"relation_name":"is_a","term_name":"anemia due to erythrocyte enzyme disorder","termid":"MONDO:0020585"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00605":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005570","MONDO:0037792","MONDO:0002280","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease VII","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0017926","MESH:D006014","MEDGEN:5342","DOID:11721","NANDO:1200823","NCIT:C118437","MedDRA:10053241","NORD:1196","NANDO:1200829","GARD:5686","OMIM:232800","SCTID:89597008","NANDO:2200543"],"synonyms":[{"name":"GSD 7","type":"related"},{"name":"GSD due to muscle phosphofructokinase deficiency","type":"exact"},{"name":"GSD type 7","type":"exact"},{"name":"GSD type VII","type":"exact"},{"name":"GSD7","type":"related"},{"name":"GSDVII","type":"exact"},{"name":"Glycogen Storage Disease Type 7","type":"exact"},{"name":"PFKM glycogen storage disease","type":"exact"},{"name":"Pfkm deficiency","type":"related"},{"name":"Tarui disease","type":"exact"},{"name":"glycogen storage disease 7","type":"related"},{"name":"glycogen storage disease VII","type":"exact"},{"name":"glycogen storage disease caused by mutation in PFKM","type":"exact"},{"name":"glycogen storage disease due to muscle phosphofructokinase deficiency","type":"related"},{"name":"glycogen storage disease type 7","type":"exact"},{"name":"glycogen storage disease type VII","type":"exact"},{"name":"glycogen storage disease, type VII","type":"exact"},{"name":"glycogenosis due to muscle phosphofructokinase deficiency","type":"exact"},{"name":"glycogenosis type 7","type":"exact"},{"name":"glycogenosis type VII","type":"exact"},{"name":"muscle phosphofructokinase deficiency","type":"related"},{"name":"phosphofructokinase deficiency","type":"exact"},{"name":"phosphofructokinase myopathy","type":"exact"}],"termid":"MONDO:0009295","terms_by_termid":{"MONDO:0009295":null},"xrefs":{"Monarch":{"xref_id":"0009295"}}}


id: PBO:0081224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYM-type containing 4","termid":"PBO:0081224"}


id: MONDO:0000595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of psychiatric disorders characterized by a disturbance in sexual desire and in the psychophysiological changes that make up the sexual response cycle.","definition_xrefs":["NCIT:C92202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychiatric disorder","termid":"MONDO:0002025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual and gender identity disorders","secondary_identifiers":["MEDGEN:452303","UMLS:C0236989","DOID:0060043","SCTID:231532002"],"synonyms":[{"name":"sexual disorder","type":"exact"}],"termid":"MONDO:0000595","xrefs":{"Monarch":{"xref_id":"0000595"}}}


id: PBO:0059182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoregulin","termid":"PBO:0059182"}


id: PBO:0031251
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_oxidative_stress","termid":"PBO:0031251"}


id: PBO:0005406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase, involved in tRNA wobble position thiolation Tum1 (predicted)","termid":"PBO:0005406"}


id: PBO:0060876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope integral membrane protein 1","termid":"PBO:0060876"}


id: PBO:0077576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and immunoglobulin domain containing 1","termid":"PBO:0077576"}


id: GO:0044323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a retinoic acid-responsive element, a variable direct repeat of the sequence PuGGTCA spaced by five nucleotides (DR5) found in the promoters of retinoic acid-responsive genes, to which retinoic acid receptors bind.","definition_xrefs":["GOC:vw","PMID:19917671","GOC:yaf","PMID:11327309","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0000976","GO:0003677"],"is_obsolete":false,"name":"retinoic acid-responsive element binding","synonyms":[{"name":"RARE binding","type":"exact"}],"termid":"GO:0044323"}


id: PBO:0076054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin","termid":"PBO:0076054"}


id: MONDO:0005009
data:
  {"annotated_genes":["SJAG_03866","SJAG_04757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86433,86434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009935"}]},"cv_name":"mondo","definition":"Failure of the heart to pump a sufficient amount of blood to meet the needs of the body tissues, resulting in tissue congestion and edema. Signs and symptoms include shortness of breath, pitting edema, enlarged tender liver, engorged neck veins, and pulmonary rales.","definition_xrefs":["NCIT:C3080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart failure","termid":"MONDO:0005252"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congestive heart failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:404.11","ICD9:428.9","UMLS:C0018802","ICD9:428","ICD9:404.13","ICD9:428.0","MEDGEN:9169","ICD9:404.01","SCTID:42343007","EFO:0000373","icd11.foundation:2136808878","DOID:6000"],"synonyms":[{"name":"congestive heart disease","type":"exact"},{"name":"failure, congestive heart","type":"exact"},{"name":"heart failure, congestive","type":"exact"},{"name":"weak heart","type":"exact"},{"name":"CHF","type":"exact"},{"name":"cardiac failure, congestive","type":"exact"}],"termid":"MONDO:0005009","terms_by_termid":{"MONDO:0009935":null},"xrefs":{"Monarch":{"xref_id":"0005009"}}}


id: SO:0002363
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for mitochondrial rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"mt_gene","termid":"SO:0000088"},{"relation_name":"is_a","term_name":"rRNA_gene","termid":"SO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_rRNA_gene","synonyms":[{"name":"mitochondrial rRNA gene","type":"exact"}],"termid":"SO:0002363"}


id: PR:O74538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2702 gene.","definition_xrefs":["UniProtKB:O74538","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.05","synonyms":[{"name":"Spom972h-rpl2702","type":"exact"}],"termid":"PR:O74538"}


id: MONDO:0001917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of perichondritis of auricle.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perichondritis of auricle","termid":"MONDO:0002246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic perichondritis of pinna","secondary_identifiers":["DOID:14243","ICD9:380.02","MEDGEN:509947","UMLS:C0155391","SCTID:45431004"],"synonyms":[{"name":"chronic perichondritis of auricle","type":"exact"},{"name":"chronic pinna perichondritis","type":"exact"},{"name":"perichondritis of auricle, chronic","type":"exact"}],"termid":"MONDO:0001917","xrefs":{"Monarch":{"xref_id":"0001917"}}}


id: PBO:0089327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap95","termid":"PBO:0089327"}


id: PBO:0090601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Dcr2","termid":"PBO:0090601"}


id: PBO:0087925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that regulates the pleiotropic drug response; zinc cluster protein that is a master regulator involved in recruiting other zinc cluster proteins to pleiotropic drug response elements (PDREs) to fine tune the regulation of multidrug resistance genes; relocalizes to the cytosol in response to hypoxia; PDR1 has a paralog, PDR3, that arose from the whole genome duplication","termid":"PBO:0087925"}


id: PBO:0054952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2366","termid":"PBO:0054952"}


id: PBO:0108928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBL pseudogene 1","termid":"PBO:0108928"}


id: PBO:0059575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 2 pseudogene 1","termid":"PBO:0059575"}


id: PBO:0085527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S27, no bacterial homolog; RPS27A has a paralog, RPS27B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0085527"}


id: PBO:0032708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_error-prone_translesion_synthesis_of_pyrimidine-pyrimidone_6-4_photoproducts","termid":"PBO:0032708"}


id: GO:0048065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship where the male insect extends his wings. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, veined wing extension","synonyms":[{"name":"male courtship behavior, wing extension","type":"broad"},{"name":"male courtship behaviour, veined wing extension","type":"exact"},{"name":"male courtship behaviour, wing extension","type":"broad"}],"termid":"GO:0048065"}


id: PBO:0082936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family; involved in mRNA export from the nucleus, remodeling messenger ribonucleoprotein particles (mRNPs), with ATPase activity stimulated by Gle1p, IP6 and Nup159p; involved in translation termination along with Sup45p (eRF1); role in the cellular response to heat stress","termid":"PBO:0082936"}


id: GO:1904854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proteasome core complex.","definition_xrefs":["GOC:TermGenie","PMID:16096059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"proteasome core complex binding","synonyms":[{"name":"20S core complex binding","type":"narrow"},{"name":"20S proteasome binding","type":"narrow"},{"name":"PA28gamma-20S proteasome binding","type":"narrow"},{"name":"macropain binding","type":"exact"}],"termid":"GO:1904854"}


id: PBO:0028446
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_midzone_during_anaphase_B","termid":"PBO:0028446"}


id: PBO:0072334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 20","termid":"PBO:0072334"}


id: PBO:0111485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD S5 small phosphatase Psr1","termid":"PBO:0111485"}


id: GO:0090108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of high-density lipoprotein particle assembly. High-density lipoprotein particle assembly is the aggregation and arrangement of proteins and lipids to form a high-density lipoprotein particle.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of high-density lipoprotein particle assembly","termid":"GO:0090107"},{"relation_name":"positively_regulates","term_name":"high-density lipoprotein particle assembly","termid":"GO:0034380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of high-density lipoprotein particle assembly","termid":"GO:0090108"}


id: GO:0015611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-ribose(out) = ADP + phosphate + D-ribose(in).","definition_xrefs":["RHEA:29903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"},{"relation_name":"is_a","term_name":"D-ribose transmembrane transporter activity","termid":"GO:0015591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type D-ribose transporter activity","secondary_identifiers":["EC:7.5.2.7","MetaCyc:ABC-28-RXN"],"synonyms":[{"name":"D-ribose porter activity","type":"broad"},{"name":"D-ribose-importing ATPase activity","type":"related"}],"termid":"GO:0015611"}


id: MONDO:0013766
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86445],"is_not":false,"summary":null,"term":"MONDO:0013766"}]},"cv_name":"mondo","definition":"A rare, hereditary, immune deficiency with skin involvement characterized by early-onset cold urticaria after generalized exposure to cold air or evaporative cooling and not after contact with cold objects. Additional immunologic abnormalities are often present - antibody deficiency, recurrent infections, autoimmune disease and symptomatic allergic disease.","definition_xrefs":["Orphanet:300359"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"familial cold autoinflammatory syndrome","termid":"MONDO:0018768"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial cold autoinflammatory syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0090064","GARD:17369","UMLS:C3280914","NANDO:2200455","MEDGEN:482544","OMIM:614468"],"synonyms":[{"name":"FACU","type":"exact"},{"name":"FCAS3","type":"related"},{"name":"PLAID","type":"exact"},{"name":"PLCG2 familial cold autoinflammatory syndrome","type":"exact"},{"name":"PLCG2-associated antibody deficiency and immune dysregulation","type":"related"},{"name":"antibody deficiency and immune dysregulation, PLCG2-associated","type":"related"},{"name":"familial atypical cold urticaria","type":"exact"},{"name":"familial cold autoinflammatory syndrome 3","type":"exact"},{"name":"familial cold autoinflammatory syndrome caused by mutation in PLCG2","type":"exact"},{"name":"familial cold autoinflammatory syndrome type 3","type":"exact"},{"name":"familial cold urticaria with common variable immunodeficiency","type":"exact"},{"name":"plaid","type":"exact"}],"termid":"MONDO:0013766","terms_by_termid":{"MONDO:0013766":null},"xrefs":{"Monarch":{"xref_id":"0013766"}}}


id: GO:0016358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure.","definition_xrefs":["GOC:aruk","PMID:22683681","GOC:bc","GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite development","termid":"GO:0016358"}


id: PBO:0077811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 binding protein 2","termid":"PBO:0077811"}


id: PBO:0070732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 2","termid":"PBO:0070732"}


id: GO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex that is located at the replication origins of a chromosome in the cytoplasm.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin recognition complex","termid":"GO:0000808"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005694"],"is_obsolete":false,"name":"cytoplasmic origin of replication recognition complex","synonyms":[{"name":"cytoplasmic ORC","type":"exact"},{"name":"prokaryotic ORC","type":"related"}],"termid":"GO:0000809"}


id: FYPO:0005927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the monoubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein ubiquitination during vegetative growth","termid":"FYPO:0002635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein monoubiquitination during vegetative growth","synonyms":[{"name":"normal protein monoubiquitination during mitotic cell cycle","type":"related"},{"name":"normal protein monoubiquitinylation during vegetative growth","type":"exact"},{"name":"normal protein monoubiquitylation during vegetative growth","type":"exact"},{"name":"normal protein/peptide monoubiquitination during vegetative growth","type":"exact"}],"termid":"FYPO:0005927"}


id: GO:0160053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of new phosphodiester bonds between a pair of short, unique DNA target sequences; occurs through a phosphoseryl intermediate in which the target sequence is first cleaved by the nucleophilic attack by a serine in the active site.","definition_xrefs":["PMID:16756503","PMID:29316791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific recombinase activity","termid":"GO:0009009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"serine-based site-specific recombinase activity","termid":"GO:0160053"}


id: MONDO:0013910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the KISS1R gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 8 with or without anosmia","secondary_identifiers":["MEDGEN:766755","GARD:15849","ICD10CM:E23.0","UMLS:C3553841","OMIM:614837","DOID:0090074"],"synonyms":[{"name":"HH8","type":"related"},{"name":"KISS1R hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 8 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in KISS1R","type":"exact"}],"termid":"MONDO:0013910","xrefs":{"Monarch":{"xref_id":"0013910"}}}


id: PBO:0051293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-16","termid":"PBO:0051293"}


id: PBO:0080834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-tRNA synthetase 2","termid":"PBO:0080834"}


id: MONDO:0001041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dental caries that involves the dentine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dental caries","termid":"MONDO:0005276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin caries","secondary_identifiers":["ICD9:521.02","MEDGEN:540210","SCTID:442551007","UMLS:C0266846","DOID:10461"],"synonyms":[{"name":"compound dental caries","type":"exact"},{"name":"dental caries extending into dentine","type":"exact"},{"name":"dental caries of dentine","type":"exact"},{"name":"dentine dental caries","type":"exact"}],"termid":"MONDO:0001041","xrefs":{"Monarch":{"xref_id":"0001041"}}}


id: MONDO:0012055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Larsen-like osseous dysplasia-short stature syndrome is a rare primary bone dysplasia characterized by a Larsen-like phenotype including multiple, congenital, large joint dislocations, craniofacial abnormalities (i.e. macrocephaly, flat occiput, prominent forehead, hypertelorism, low-set, malformed ears, flat nose, cleft palate), spinal abnormalities, cylindrical fingers, and talipes equinovarus, as well as growth retardation (resulting in short stature) and delayed bone age. Other reported clinical manifestations include severe developmental delay, hypotonia, clinodactyly, congenital heart defect and renal dysplasia.","definition_xrefs":["Orphanet:2370"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Larsen-like osseous dysplasia-short stature syndrome","secondary_identifiers":["OMIM:608545","GARD:16595","MEDGEN:325280","MESH:C563914","UMLS:C1837884"],"synonyms":[{"name":"Larsen-like syndrome","type":"related"},{"name":"Larsen-like syndrome, isolated cases","type":"exact"},{"name":"Lrsl","type":"related"}],"termid":"MONDO:0012055","xrefs":{"Monarch":{"xref_id":"0012055"}}}


id: GO:0036295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting an increase in the level of oxygen.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to increased oxygen levels","termid":"GO:0036296"},{"relation_name":"is_a","term_name":"cellular response to oxygen levels","termid":"GO:0071453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to increased oxygen levels","synonyms":[{"name":"cellular response to raised oxygen levels","type":"exact"}],"termid":"GO:0036295"}


id: PBO:0109033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MESD pseudogene 1","termid":"PBO:0109033"}


id: GO:0019632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving shikimate, (3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate, the anion of shikimic acid. It is an important intermediate in the biosynthesis of aromatic amino acids.","definition_xrefs":["GOC:sm","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"shikimate metabolic process","synonyms":[{"name":"shikimate metabolism","type":"exact"}],"termid":"GO:0019632"}


id: GO:0045917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of complement activation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of humoral immune response","termid":"GO:0002922"},{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"positively_regulates","term_name":"complement activation","termid":"GO:0006956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of complement activation","synonyms":[{"name":"activation of complement activation","type":"narrow"},{"name":"positive regulation of complement cascade","type":"exact"},{"name":"stimulation of complement activation","type":"narrow"},{"name":"up regulation of complement activation","type":"exact"},{"name":"up-regulation of complement activation","type":"exact"},{"name":"upregulation of complement activation","type":"exact"}],"termid":"GO:0045917"}


id: PBO:0074978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-20","termid":"PBO:0074978"}


id: PBO:0004666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sds3-like family protein Dep1","termid":"PBO:0004666"}


id: GO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of thyroid hormone mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of thyroid hormone receptor signaling pathway","termid":"GO:0002155"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"thyroid hormone receptor signaling pathway","termid":"GO:0002154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of thyroid hormone receptor signaling pathway","synonyms":[{"name":"negative regulation of thyroid hormone mediated signaling pathway","type":"exact"},{"name":"negative regulation of thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002156"}


id: MONDO:0012740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal 22q11.2 microdeletion syndrome is a rare chromosomal anomaly syndrome resulting from the partial deletion of the long arm of chromosome 22 with a highly variable phenotype characterized by prematurity, pre- and post-natal growth retardation, developmental delay (particularly speech), mild intellectual disability, variable cardiac defects, and minor skeletal anomalies (such as clinodactyly). Dysmorphic features include prominent forehead, arched eyebrows, deep set eyes, narrow upslanting palpebral fissures, ear abnormalities, hypoplastic alae nasi, smooth philtrum, down-turned mouth, thin upper lip, retro/micrognatia and pointed chin. For certain very distal deletions, there is a risk of developing malignant rhabdoid tumors.","definition_xrefs":["Orphanet:261330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"22q11.2 deletion syndrome","termid":"MONDO:0018923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002320","MONDO:0005267"],"is_obsolete":false,"name":"chromosome 22q11.2 deletion syndrome, distal","secondary_identifiers":["UMLS:C2678480","DOID:0060413","MESH:C567511","DECIPHER:72","SCTID:734029004","GARD:17245","MEDGEN:395634","OMIM:611867"],"synonyms":[{"name":"chromosome 22q11.2 deletion syndrome, distal","type":"exact"},{"name":"distal 22q11.2 microdeletion syndrome","type":"exact"},{"name":"distal chromosome 22Q11.2 deletion syndrome","type":"related"},{"name":"distal del(22)(q11.2)","type":"exact"},{"name":"distal monosomy 22q11.2","type":"exact"}],"termid":"MONDO:0012740","xrefs":{"Monarch":{"xref_id":"0012740"}}}


id: PBO:0058950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKKS centrosomal shuttling protein","termid":"PBO:0058950"}


id: PBO:0074134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 34 member 2","termid":"PBO:0074134"}


id: PBO:0046297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMSY divergent transcript","termid":"PBO:0046297"}


id: GO:0003206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cardiac chamber is generated and organized. A cardiac chamber is an enclosed cavity within the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber morphogenesis","synonyms":[{"name":"heart chamber morphogenesis","type":"exact"}],"termid":"GO:0003206"}


id: GO:0080109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetonitrile + H2O = indole-3-acetamide.","definition_xrefs":["PMID:12430025","PMID:11607511","MetaCyc:RXN-7567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile hydratase activity","termid":"GO:0018822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"indole-3-acetonitrile nitrile hydratase activity","secondary_identifiers":["KEGG_REACTION:R04020"],"termid":"GO:0080109"}


id: PBO:0081612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 540","termid":"PBO:0081612"}


id: FYPO:0002907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which telomeres have fused, forming circular chromosomes, during G1 phase of the mitotic cell cycle.","definition_xrefs":["PMID:23133674","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circularized chromosome","termid":"FYPO:0002702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"circularized chromosome during mitotic G1 phase","synonyms":[{"name":"circular chromosomes during mitotic G1 phase","type":"exact"},{"name":"circularised chromosome during mitotic G1 phase","type":"exact"},{"name":"circularized chromosome during G1 during vegetative growth","type":"exact"},{"name":"fused telomeres during mitotic G1 phase","type":"related"},{"name":"telomere end fusion during mitotic G1 phase","type":"related"},{"name":"telomere fusion during mitotic G1 phase","type":"related"},{"name":"telomeres fused during mitotic G1 phase","type":"related"}],"termid":"FYPO:0002907"}


id: FYPO:0001875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the preferential localization of a protein to either the old or new spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal asymmetric protein localization, with protein localized to both mitotic spindle pole bodies","termid":"FYPO:0001874"},{"relation_name":"is_a","term_name":"decreased protein localization to spindle pole body","termid":"FYPO:0002770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased asymmetric protein localization, with protein localized to both mitotic spindle pole bodies","synonyms":[{"name":"decreased asymmetric protein localisation to old or new mitotic spindle pole body","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic SPB","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"decreased occurrence of normally asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"},{"name":"reduced asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0001875"}


id: GO:0070212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of multiple ADP-ribose residues from NAD to a protein amino acid, forming a poly(ADP-ribose) chain.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:rl","PMID:25043379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein poly-ADP-ribosylation","synonyms":[{"name":"addition of poly-ADP-ribose to protein","type":"exact"},{"name":"poly(ADP-ribose) addition to protein","type":"exact"},{"name":"protein amino acid poly-ADP-ribosylation","type":"exact"},{"name":"protein poly(ADP-ribose) metabolism","type":"related"},{"name":"protein poly(ADP-ribose) synthesis","type":"exact"}],"termid":"GO:0070212"}


id: MONDO:0001619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete relapsing fever (obsolete MONDO:0001619)","termid":"MONDO:0001619","xrefs":{"Monarch":{"xref_id":"0001619"}}}


id: GO:0046403
data:
  {"annotated_genes":["SJAG_02680"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70555],"is_not":false,"summary":null,"term":"GO:0046403"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'end (2'-deoxyribonucleotide 3'-phosphate)-DNA + H2O = a 3'-end 2'-deoxyribonucleotide-DNA + phosphate.","definition_xrefs":["RHEA:14113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"polynucleotide 3'-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5649705","EC:3.1.3.32","MetaCyc:POLYNUCLEOTIDE-3-PHOSPHATASE-RXN"],"synonyms":[{"name":"2'(3')-polynucleotidase activity","type":"related"},{"name":"5'-polynucleotidekinase 3'-phosphatase activity","type":"related"},{"name":"DNA 3'-phosphatase activity","type":"related"},{"name":"deoxyribonucleate 3'-phosphatase activity","type":"related"},{"name":"polynucleotide 3'-phosphohydrolase activity","type":"related"}],"termid":"GO:0046403","terms_by_termid":{"GO:0046403":null}}


id: MONDO:0010531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Contractures - ectodermal dysplasia - cleft lip/palate is an ectodermal dyplasia syndrome characterized by severe arthrogryposis, multiple ectodermal dysplasia features, cleft lip/palate, facial dysmorphism, growth deficiency and a moderate delay of psychomotor development. Ectodermal dysplasia manifestations include sparse, brittle and hypopigmented hair, xerosis, multiple nevi, small conical shaped teeth and hypodontia, and facial dysmorphism with blepharophimosis, deep-set eyes and micrognathia.","definition_xrefs":["Orphanet:1484"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"contractures-ectodermal dysplasia-cleft lip/palate syndrome","secondary_identifiers":["GARD:1515","MEDGEN:375546","UMLS:C1844935","OMIM:301815","SCTID:720746006"],"synonyms":[{"name":"Ladda Zonana Ramer syndrome","type":"related"},{"name":"Ladda-Zonana-Ramer syndrome","type":"exact"},{"name":"arthrogryposis, ectodermal dysplasia, cleft LIP/palate, and developmental delay","type":"related"},{"name":"congenital contractures, ectodermal dysplasia, cleft lip/palate, and developmental impairment","type":"related"},{"name":"contractures ectodermal dysplasia cleft lip palate","type":"related"}],"termid":"MONDO:0010531","xrefs":{"Monarch":{"xref_id":"0010531"}}}


id: MONDO:0002247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A coagulation disorder characterized by the partial or complete absence of factor X activity in the blood.","definition_xrefs":["NCIT:C131632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor X deficiency","secondary_identifiers":["MEDGEN:4635","UMLS:C0015519","MESH:D005171","NANDO:2200678","SCTID:76642003"],"termid":"MONDO:0002247","xrefs":{"Monarch":{"xref_id":"0002247"}}}


id: GO:1904670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any actin filament polymerization that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["PMID:24127216","GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete actin filament polymerization involved in mitotic actomyosin contractile ring assembly (obsolete GO:1904670)","termid":"GO:1904670"}


id: GO:0140233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cAMP has been bound by the channel complex or one of its constituent parts, to regulate the postsynaptic membrane potential.","definition_xrefs":["GOC:pvn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cAMP-activated cation channel activity","termid":"GO:0005222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"intracellular cAMP-activated cation channel activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"intracellular cAMP activated cation channel activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0140233"}


id: MONDO:0003161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign ependymoma (obsolete MONDO:0003161)","termid":"MONDO:0003161","xrefs":{"Monarch":{"xref_id":"0003161"}}}


id: GO:0003143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the embryonic heart tube are generated and organized. The embryonic heart tube is an epithelial tube that will give rise to the mature heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"embryonic heart tube development","termid":"GO:0035050"},{"relation_name":"part_of","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube morphogenesis","termid":"GO:0003143"}


id: PBO:0043585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XVII alpha 1 chain","termid":"PBO:0043585"}


id: PBO:0059039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 26","termid":"PBO:0059039"}


id: PBO:0070515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 14","termid":"PBO:0070515"}


id: PATO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being entwined and difficult to unravel.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tangled","termid":"PATO:0001846"}


id: PBO:0073278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 12","termid":"PBO:0073278"}


id: MONDO:0004158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic epithelial neoplasm characterized by the presence of columnar mucin-producing epithelial cells, ovarian-type stroma formation, and a focal or extensive invasive carcinomatous component.","definition_xrefs":["NCIT:C41246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic mucinous cystadenocarcinoma","termid":"MONDO:0004156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatic mucinous-cystic neoplasm with an associated invasive carcinoma","secondary_identifiers":["ICDO:8470/3","UMLS:C1518870","DOID:7236","MEDGEN:309550"],"synonyms":[{"name":"pancreatic invasive mucinous cystadenocarcinoma","type":"exact"},{"name":"pancreatic mucinous cystic neoplasm with an associated invasive carcinoma","type":"exact"},{"name":"pancreatic mucinous-cystic neoplasm with an associated invasive carcinoma","type":"exact"}],"termid":"MONDO:0004158","xrefs":{"Monarch":{"xref_id":"0004158"}}}


id: PBO:0035938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_ubiquitination_during_vegetative_growth","termid":"PBO:0035938"}


id: GO:0070048
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains endobrevin (VAMP8), SNAP-25, and syntaxin 1a (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"endobrevin-SNAP-25-syntaxin-1a complex","synonyms":[{"name":"SNARE complex (Stx1a, Snap25, Vamp8)","type":"narrow"},{"name":"Stx1a-Snap25-Vamp8 complex","type":"narrow"}],"termid":"GO:0070048"}


id: FYPO:0004134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to diethyl maleate is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to diethyl maleate","synonyms":[{"name":"decreased RNA accumulation during cellular response to diethyl maleate","type":"related"},{"name":"decreased RNA level during cellular response to DEM","type":"exact"},{"name":"decreased RNA level during cellular response to diethyl maleate during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to diethyl maleate during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to diethyl maleate","type":"narrow"},{"name":"decreased transcript level during cellular response to diethyl maleate","type":"exact"},{"name":"reduced RNA level during cellular response to diethyl maleate","type":"exact"}],"termid":"FYPO:0004134"}


id: PBO:0090247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD phosphatase Ssu72","termid":"PBO:0090247"}


id: FYPO:0005983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of potassium ions out of a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal potassium export","termid":"FYPO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased potassium export","synonyms":[{"name":"decreased cellular potassium export","type":"exact"},{"name":"decreased potassium export during mitotic cell cycle","type":"related"},{"name":"decreased potassium export during vegetative growth","type":"exact"},{"name":"decreased potassium export from cell","type":"exact"},{"name":"decreased potassium ion export","type":"exact"},{"name":"decreased potassium ion export across plasma membrane","type":"exact"},{"name":"reduced potassium export","type":"exact"}],"termid":"FYPO:0005983"}


id: FYPO:0000824
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118955,118957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[118958,118956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[118942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[118943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell differs from normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"},{"relation_name":"output_of","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"altered RNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation: abnormal","type":"related"},{"name":"abnormal RNA level","type":"exact"},{"name":"altered cellular RNA level","type":"exact"},{"name":"altered cellular mRNA level","type":"narrow"},{"name":"altered transcript level","type":"exact"}],"termid":"FYPO:0000824","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO:0004573":null,"FYPO:0004982":null,"FYPO_EXT:0000001":null}}


id: PBO:0000634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Ies4","termid":"PBO:0000634"}


id: MONDO:0005424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Enlargement of an area of the body due to obstruction within the lymphatic system and the resulting accumulation of lymph.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphedema","termid":"MONDO:0019297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"elephantiasis","secondary_identifiers":["EFO:0004711","MESH:D004604","UMLS:C0013882","SCTID:240820001","MEDGEN:8582","DOID:4976"],"termid":"MONDO:0005424","xrefs":{"Monarch":{"xref_id":"0005424"}}}


id: GO:0010325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of raffinose family oligosaccharides (RFOs, such as raffinose, stachyose, verbascose and other molecules with a higher degree of galactosyl polymerization).","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide biosynthetic process","termid":"GO:0009312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"raffinose family oligosaccharide biosynthetic process","synonyms":[{"name":"raffinose family oligosaccharide biosynthesis","type":"exact"}],"termid":"GO:0010325"}


id: GO:0006949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane. Syncytia are normally derived from single cells that fuse or fail to complete cell division.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"syncytium formation","termid":"GO:0006949"}


id: PR:P00332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alcohol dehydrogenase, propanol-preferring that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04737","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.01","secondary_identifiers":["UniProtKB:P00332"],"synonyms":[{"name":"Spom972h-adhP","type":"exact"}],"termid":"PR:P00332"}


id: MONDO:0017685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B12-responsive methylmalonic acidemia","termid":"MONDO:0017214"},{"relation_name":"is_a","term_name":"methylmalonic aciduria and/or homocystinuria, cblD type","termid":"MONDO:0100463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"vitamin B12-responsive methylmalonic acidemia, type cblDv2","secondary_identifiers":["UMLS:C1848554","GARD:17391","MEDGEN:376388","Orphanet:308442"],"synonyms":[{"name":"vitamin B12-responsive methylmalonic aciduria, type cblDv2","type":"exact"}],"termid":"MONDO:0017685","xrefs":{"Monarch":{"xref_id":"0017685"}}}


id: GO:0008407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the chaeta are generated and organized. A chaeta is a sensory multicellular cuticular outgrowth of a specifically differentiated cell.","definition_xrefs":["GOC:dos","GOC:bf","GOC:go_curators","GOC:cjm","FBbt:00005177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"chaeta development","termid":"GO:0022416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chaeta morphogenesis","synonyms":[{"name":"bristle morphogenesis","type":"narrow"}],"termid":"GO:0008407"}


id: PBO:0051831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 5 pseudogene 1","termid":"PBO:0051831"}


id: PBO:0001468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex subunit Vps26","termid":"PBO:0001468"}


id: PBO:0089827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial heat shock protein Hsp78","termid":"PBO:0089827"}


id: MONDO:0007865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"knuckle pads","secondary_identifiers":["UMLS:C0264000","OMIM:149100","ICD10CM:M72.1","icd11.foundation:1824875472","ICD9:728.79","MEDGEN:78103","SCTID:16687001"],"synonyms":[{"name":"knuckle pads","type":"exact"}],"termid":"MONDO:0007865","xrefs":{"Monarch":{"xref_id":"0007865"}}}


id: PBO:0064764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase G","termid":"PBO:0064764"}


id: PBO:0054353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1746","termid":"PBO:0054353"}


id: GO:0061970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves the right sidedness in an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["GOC:BHF","PMID:18629866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of left/right asymmetry","termid":"GO:0061968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of right sidedness","termid":"GO:0061970"}


id: GO:0120246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).","definition_xrefs":["DOI:10.1007/978-1-4615-4913-0_3","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylenic compound metabolic process","synonyms":[{"name":"alkyne substituted compound metabolic process","type":"exact"},{"name":"alkyne substituted compound metabolism","type":"exact"}],"termid":"GO:0120246"}


id: MONDO:0003108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infratentorial cancer","termid":"MONDO:0003107"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervicomedullary junction neoplasm","secondary_identifiers":["NCIT:C5423","UMLS:C1332923","DOID:4707","MEDGEN:272453"],"synonyms":[{"name":"cervicomedullary junction neoplasms","type":"exact"},{"name":"cervicomedullary junction tumor","type":"exact"},{"name":"cervicomedullary junction tumour","type":"exact"},{"name":"neoplasm of cervicomedullary junction","type":"exact"},{"name":"neoplasm of the cervicomedullary junction","type":"exact"},{"name":"tumor of cervicomedullary junction","type":"exact"},{"name":"tumor of the cervicomedullary junction","type":"exact"},{"name":"tumour of cervicomedullary junction","type":"exact"},{"name":"tumour of the cervicomedullary junction","type":"exact"}],"termid":"MONDO:0003108","xrefs":{"Monarch":{"xref_id":"0003108"}}}


id: MONDO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tertiary neurosyphilis that results when chronic meningoencephalitis causes destruction of cortical parenchyma. The infection has symptom irritability, has symptom difficulty concentrating, has symptom deterioration of memory, has symptom defective judgment, has symptom headaches, has symptom insomnia, has symptom fatigue, and has symptom lethargy.","definition_xrefs":["DOID:0050490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurosyphilis","termid":"MONDO:0004944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parenchymatous neurosyphilis","termid":"MONDO:0000335","xrefs":{"Monarch":{"xref_id":"0000335"}}}


id: GO:1990426
data:
  {"annotated_genes":["SJAG_02822","SJAG_01584","SJAG_02992","SJAG_01832","SJAG_01076","SJAG_03898","SJAG_04272","SJAG_03300","SJAG_02439","SJAG_02198","SJAG_02214","SJAG_03843","SJAG_01374","SJAG_01221","SJAG_01677","SJAG_03780","SJAG_01410","SJAG_02079"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63930,88955,90744,94620,94863,95804,95969,98045,98749,107526,107550,108875,109349,112310,116598],"is_not":false,"summary":null,"term":"GO:1990426"},{"annotations":[88787,116211,105931],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120292"}]},"cv_name":"biological_process","definition":"Replication fork processing that includes recombination between DNA near the arrested fork and homologous sequences. Proteins involved in homologous recombination are required for replication restart.","definition_xrefs":["GOC:mah","PMID:23093942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork processing","termid":"GO:0031297"},{"relation_name":"is_a","term_name":"mitotic DNA replication maintenance of fidelity","termid":"GO:1990505"}],"gene_count":18,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01221":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01584":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02198":null,"SJAG_02214":null,"SJAG_02439":null,"SJAG_02822":null,"SJAG_02992":null,"SJAG_03300":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03898":null,"SJAG_04272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"mitotic recombination-dependent replication fork processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1903211"],"synonyms":[{"name":"homologous recombination dependent replication fork recovery","type":"related"},{"name":"homologous recombination-dependent replication fork processing","type":"exact"},{"name":"mitotic recombination involved in collapsed replication fork processing","type":"exact"},{"name":"mitotic recombination involved in recovery from replication fork arrest","type":"exact"},{"name":"mitotic recombination involved in recovery from replication fork stalling","type":"exact"},{"name":"mitotic recombination involved in replication fork processing","type":"related"},{"name":"mitotic recombination involved in replication fork restart","type":"related"},{"name":"mitotic recombination involved in replication restart","type":"related"}],"termid":"GO:1990426","terms_by_termid":{"GO:0120292":null,"GO:1990426":null}}


id: GO:1903783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion import across the plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:nc","PMID:19376779","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sodium ion transmembrane transport","termid":"GO:1902306"},{"relation_name":"is_a","term_name":"regulation of sodium ion import across plasma membrane","termid":"GO:1903782"},{"relation_name":"negatively_regulates","term_name":"sodium ion import across plasma membrane","termid":"GO:0098719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of sodium ion import across plasma membrane","synonyms":[{"name":"down regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"down-regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"downregulation of sodium ion import across plasma membrane","type":"exact"},{"name":"inhibition of sodium ion import across plasma membrane","type":"narrow"}],"termid":"GO:1903783"}


id: GO:0072275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric glomerulus are generated and organized. The metanephric glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney, or metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus morphogenesis","termid":"GO:0072102"},{"relation_name":"part_of","term_name":"metanephric glomerulus development","termid":"GO:0072224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerulus morphogenesis","termid":"GO:0072275"}


id: MONDO:0012171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marfanoid habitus with situs inversus","secondary_identifiers":["MEDGEN:323046","MESH:C563814","UMLS:C1836994","OMIM:609008"],"synonyms":[{"name":"marfanoid habitus with situs inversus","type":"exact"}],"termid":"MONDO:0012171","xrefs":{"Monarch":{"xref_id":"0012171"}}}


id: MONDO:0043291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormality characterized by macroscopic or microscopic outpouchings of gallbladder mucosa into the muscle of the gallbladder wall. It may be associated with cholecystitis or gallstones.","definition_xrefs":["MESH:C535869"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"},{"relation_name":"is_a","term_name":"gallbladder disorder","termid":"MONDO:0005281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"Rokitansky-Aschoff sinuses of the gallbladder","secondary_identifiers":["UMLS:C0267892","MEDGEN:78636","SCTID:22149007"],"synonyms":[{"name":"Aschoff-Rokitansky sinuses","type":"exact"},{"name":"Rokitansky-Aschoff sinuses","type":"related"},{"name":"intramural diverticulosis of the gallbladder","type":"related"}],"termid":"MONDO:0043291","xrefs":{"Monarch":{"xref_id":"0043291"}}}


id: PR:P0CS84
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CS84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1348.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.15","synonyms":[{"name":"Spom972h-SPBC1348.15","type":"exact"}],"termid":"PR:P0CS84"}


id: GO:0032730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 alpha production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 alpha production","termid":"GO:0032650"},{"relation_name":"is_a","term_name":"positive regulation of interleukin-1 production","termid":"GO:0032732"},{"relation_name":"positively_regulates","term_name":"interleukin-1 alpha production","termid":"GO:0032610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-1 alpha production","secondary_identifiers":["GO:0050726","GO:0050717"],"synonyms":[{"name":"activation of interleukin-1 alpha production","type":"narrow"},{"name":"positive regulation of IL-1 alpha production","type":"exact"},{"name":"positive regulation of interleukin-1 alpha biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 alpha secretion","type":"narrow"},{"name":"stimulation of interleukin-1 alpha production","type":"narrow"},{"name":"up regulation of interleukin-1 alpha production","type":"exact"},{"name":"up-regulation of interleukin-1 alpha production","type":"exact"},{"name":"upregulation of interleukin-1 alpha production","type":"exact"}],"termid":"GO:0032730"}


id: MONDO:0022057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow growing, locally invasive neoplasm arising from tooth-forming tissues. It most often grows intraosseously in the mandible and less frequently in the maxilla. In a minority of cases it grows extraosseously in the gingiva. It is characterized by the presence of a fibrous stroma, epithelial cells with abundant eosinophilic cytoplasm, and amyloid material which is often calcified. Small tumors may be successfully treated with enucleation. Local resection is usually required for larger tumors. Recurrences have been reported in a minority of cases.","definition_xrefs":["NCIT:C54301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"odontogenic neoplasm","termid":"MONDO:0021192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"calcifying epithelial odontogenic tumor","secondary_identifiers":["ICDO:9340/0","MEDGEN:87266","UMLS:C0334574","MESH:C537961"],"synonyms":[{"name":"CEOT","type":"related"},{"name":"Pindborg tumor","type":"exact"},{"name":"Pindborg tumour","type":"exact"},{"name":"calcifying epithelial odontogenic tumor","type":"exact"}],"termid":"MONDO:0022057","xrefs":{"Monarch":{"xref_id":"0022057"}}}


id: PBO:0049897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocysteine inducible ER protein with ubiquitin like domain 1","termid":"PBO:0049897"}


id: PBO:0116751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related BAF chromatin remodeling complex subunit D1","termid":"PBO:0116751"}


id: PBO:0005248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex subunit Vps5","termid":"PBO:0005248"}


id: GO:0071357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a type I interferon stimulus. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to type I interferon","termid":"GO:0034340"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to type I interferon","synonyms":[{"name":"cellular response to type I IFN","type":"exact"}],"termid":"GO:0071357"}


id: MONDO:0015561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aleukemic mast cell leukemia (obsolete MONDO:0015561)","termid":"MONDO:0015561","xrefs":{"Monarch":{"xref_id":"0015561"}}}


id: FYPO:0000917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of citrate (Si)-synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal citrate (Si)-synthase activity","synonyms":[{"name":"abnormal citrate synthase activity","type":"broad"}],"termid":"FYPO:0000917"}


id: GO:0062197
data:
  {"annotated_genes":["SJAG_02945","SJAG_03893","SJAG_01199","SJAG_02495","SJAG_00984","SJAG_03303","SJAG_02515","SJAG_03185","SJAG_04632","SJAG_00996","SJAG_05181","SJAG_02592","SJAG_03828","SJAG_01855","SJAG_00661","SJAG_04399","SJAG_04403","SJAG_03896","SJAG_04953","SJAG_00668","SJAG_02573","SJAG_00141","SJAG_06611","SJAG_04036","SJAG_04823","SJAG_04125","SJAG_06622","SJAG_06621","SJAG_00409","SJAG_02249","SJAG_01734","SJAG_00596","SJAG_01162","SJAG_02858","SJAG_01292","SJAG_03924","SJAG_03653","SJAG_03903","SJAG_04205","SJAG_00419","SJAG_02044","SJAG_01216","SJAG_03330","SJAG_04311","SJAG_04726","SJAG_01084","SJAG_02485","SJAG_04668","SJAG_00365","SJAG_02135","SJAG_00027","SJAG_03414","SJAG_02883","SJAG_04063","SJAG_02091","SJAG_04788","SJAG_02342","SJAG_02433","SJAG_03166"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117163,104846,118085,99802,94987,108630],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[92197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[89299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[102017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071500"},{"annotations":[114257,94159,104324,106298,110136,116075,102586,116872,91683,95762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[74983,88350,89885,76714,93363,78861,63915,97419,95355,108730,73136,73488,91954,108731,68004,90682,75428,70050,107598,95779,76631,74827,108732,89983,101655,108729,66930,77404,108733,114258,108728,108727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034599"},{"annotations":[99974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[74117,92934,68420,64937,88769,60844,89191,58070,99077],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus indicating the organism is under stress.","definition_xrefs":["PMID:26653712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":59,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00141":null,"SJAG_00365":null,"SJAG_00409":null,"SJAG_00419":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00668":null,"SJAG_00984":null,"SJAG_00996":null,"SJAG_01084":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_01855":null,"SJAG_02044":null,"SJAG_02091":null,"SJAG_02135":null,"SJAG_02249":null,"SJAG_02342":null,"SJAG_02433":null,"SJAG_02485":null,"SJAG_02495":null,"SJAG_02515":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02858":null,"SJAG_02883":null,"SJAG_02945":null,"SJAG_03166":null,"SJAG_03185":null,"SJAG_03303":null,"SJAG_03330":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03896":null,"SJAG_03903":null,"SJAG_03924":null,"SJAG_04036":null,"SJAG_04063":null,"SJAG_04125":null,"SJAG_04205":null,"SJAG_04311":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04668":null,"SJAG_04726":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_06611":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chemical stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-9711123"],"termid":"GO:0062197","terms_by_termid":{"GO:0019430":null,"GO:0034599":null,"GO:0061692":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null,"GO:0071500":null}}


id: PBO:0047744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 8","termid":"PBO:0047744"}


id: PBO:0087184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A49; essential for nucleolar assembly and for high polymerase loading rate; required for nucleolar localization of Rpa34p","termid":"PBO:0087184"}


id: MONDO:0007816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immune suppression (obsolete MONDO:0007816)","secondary_identifiers":["OMIM:146850"],"synonyms":[{"name":"IS","type":"related"},{"name":"Iscw","type":"related"},{"name":"immune suppression","type":"exact"},{"name":"streptococcal cell wall antigen, suppression of immune response to","type":"related"}],"termid":"MONDO:0007816","xrefs":{"Monarch":{"xref_id":"0007816"}}}


id: MONDO:0000221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebroretinal microangiopathy with calcifications and cysts (obsolete MONDO:0000221)","termid":"MONDO:0000221","xrefs":{"Monarch":{"xref_id":"0000221"}}}


id: PBO:0050510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C10","termid":"PBO:0050510"}


id: GO:0043559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to insulin, a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"insulin binding","termid":"GO:0043559"}


id: GO:0021585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the pons. This process pertains to the physical shaping of a rudimentary structure. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","GOC:jid","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"hindbrain structural organization","termid":"GO:0021577"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons structural organization","synonyms":[{"name":"pons structural organisation","type":"exact"}],"termid":"GO:0021585"}


id: MONDO:0035423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neutral lipid storage disease","termid":"MONDO:0015611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"triglyceride deposit cardiomyovasculopathy","secondary_identifiers":["SCTID:1279844009","MEDGEN:1830096","GARD:22267","Orphanet:565612","ICD10CM:E75.5","UMLS:C5680124"],"synonyms":[{"name":"Neutral lipid storage disease with severe cardiovascular involvement","type":"exact"},{"name":"TGCV","type":"exact"}],"termid":"MONDO:0035423","xrefs":{"Monarch":{"xref_id":"0035423"}}}


id: FYPO:0008034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 7 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:32282918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 7 residues during vegetative growth","termid":"FYPO:0008034"}


id: GO:1902558
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"}]},"cv_name":"biological_process","definition":"The process in which 5'-adenylyl sulfate is transported across a membrane.","definition_xrefs":["PMID:24296033","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"5'-adenylyl sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 5'-phosphosulfate transmembrane transport","type":"exact"}],"termid":"GO:1902558","terms_by_termid":{"GO:1990553":null}}


id: PBO:0041091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BR serine/threonine kinase 2","termid":"PBO:0041091"}


id: MONDO:0004940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pelvic inflammatory disease","termid":"MONDO:0000922"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute female pelvic peritonitis","secondary_identifiers":["MEDGEN:541683","DOID:9978","ICD10CM:N73.3","ICD9:614.5","SCTID:85051008","UMLS:C0269032"],"termid":"MONDO:0004940","xrefs":{"Monarch":{"xref_id":"0004940"}}}


id: GO:0048666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron development","termid":"GO:0048666"}


id: GO:0031456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycine betaine, N-trimethylglycine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine biosynthetic process","termid":"GO:0006578"},{"relation_name":"is_a","term_name":"glycine betaine metabolic process","termid":"GO:0031455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine biosynthetic process","synonyms":[{"name":"N-trimethylglycine biosynthesis","type":"exact"},{"name":"N-trimethylglycine biosynthetic process","type":"exact"},{"name":"glycine betaine anabolism","type":"exact"},{"name":"glycine betaine biosynthesis","type":"exact"},{"name":"glycine betaine formation","type":"exact"},{"name":"glycine betaine synthesis","type":"exact"}],"termid":"GO:0031456"}


id: PBO:0038359
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-activity_directly_negatively_regulates_activity_of","termid":"PBO:0038359"}


id: FYPO:0004503
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein having high molecular mass due to polyubiquitin conjugation is greater than normal.","definition_xrefs":["PMID:8247131","PomBase:mah","PMID:16149916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular HMW ubiquitin conjugate level","synonyms":[{"name":"accumulation of HMW ubiquitin conjugates","type":"exact"},{"name":"accumulation of high molecular mass ubiquitin conjugates","type":"exact"},{"name":"accumulation of high molecular weight ubiquitin conjugates","type":"exact"},{"name":"increased HMW ubiquitin conjugate accumulation","type":"related"},{"name":"increased cellular HMW ubiquitin conjugate level during mitotic cell cycle","type":"related"},{"name":"increased cellular HMW ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular mass ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular weight ubiquitin conjugate level during vegetative growth","type":"exact"}],"termid":"FYPO:0004503"}


id: GO:0015053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Hydrophobic glycoprotein to which 11-cis-retinal binds as a Schiff base (in rhodopsin) or 3,4-didehydro-11-cis-retinal binds as a Schiff base in cyanopsin and porphyropsin.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete opsin (obsolete GO:0015053)","synonyms":[{"name":"opsin","type":"exact"}],"termid":"GO:0015053"}


id: PBO:0017825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-site clamp monopolin complex subunit Csm1/Pcs1","termid":"PBO:0017825"}


id: PBO:0078608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 62","termid":"PBO:0078608"}


id: PBO:0041867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 14","termid":"PBO:0041867"}


id: MONDO:0044219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. The Duffy blood group system, which consists of 4 alleles, 5 phenotypes, and 5 antigens, is important in clinical medicine because of transfusion incompatibilities and hemolytic disease of the newborn. Duffy antigens are located on ACKR1 (OMIM:613665), or DARC, an acidic glycoprotein found on erythrocytes and other cells throughout the body. The 2 principal antigens, Fy(a) and Fy(b), are produced by the FYA and FYB codominant alleles (see {613665.0001}). Four phenotypes are defined by the corresponding antibodies, anti-Fy(a) and anti-Fy(b): Fy(a+b-), Fy(a-b+), Fy(a+b+), and Fy(a-b-). Fy(a-b-), or Duffy null, is the major phenotype in African and American blacks and is characterized by the presence of Fy(b) on nonerythroid cells, but an absence of Fy(b) on erythrocytes. The Fy(a-b-) phenotype is associated with complete resistance to infection by the malarial parasite Plasmodium vivax (see OMIM:611162). Individuals with the Fy(a-b-) phenotype have the FYB-erythroid silent (FYB-ES) allele with a mutation in the DARC promoter ({613665.0002}). A fifth phenotype, Fy(bwk), or Fy(x), is characterized by weak Fy(b) expression on erythrocytes due to a reduced amount of protein. Individuals with the Fy(bwk) phenotype have the FYB-weak (FYB-WK) allele, also called the FYX allele, with a missense mutation in DARC ({613665.0003}). Other Duffy antigens include Fy3, Fy4, Fy5, and Fy6 (reviews by {21:Pogo and Chaudhuri (2000)}, {10:Langhi and Bordin (2006)}, and {14:Meny (2010)}).","definition_xrefs":["OMIM:110700"],"gene_count":0,"genotype_count":0,"name":"obsolete blood group, duffy system (obsolete MONDO:0044219)","synonyms":[{"name":"Duffy blood Group system","type":"related"},{"name":"FY","type":"related"},{"name":"Plasmodium vivax, resistance to","type":"related"},{"name":"blood group, DUFFY system","type":"related"},{"name":"blood group, Duffy system","type":"exact"}],"termid":"MONDO:0044219","xrefs":{"Monarch":{"xref_id":"0044219"}}}


id: GO:0019260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,2-dichloroethane, a major commodity chemical used, for example, in the manufacture of vinyl chloride.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,2-dichloroethane metabolic process","termid":"GO:0018899"},{"relation_name":"is_a","term_name":"halogenated hydrocarbon catabolic process","termid":"GO:0042206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,2-dichloroethane catabolic process","secondary_identifiers":["MetaCyc:12DICHLORETHDEG-PWY"],"synonyms":[{"name":"1,2-dichloroethane breakdown","type":"exact"},{"name":"1,2-dichloroethane catabolism","type":"exact"},{"name":"1,2-dichloroethane degradation","type":"exact"}],"termid":"GO:0019260"}


id: PBO:0083587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YDR535C is not an essential gene","termid":"PBO:0083587"}


id: PBO:0039235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminolevulinate dehydratase","termid":"PBO:0039235"}


id: PBO:0088918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine acetyltransferase Rtt109","termid":"PBO:0088918"}


id: PBO:0052561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2A","termid":"PBO:0052561"}


id: GO:0048381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the lateral mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"lateral mesoderm morphogenesis","termid":"GO:0048369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesoderm structural organization","synonyms":[{"name":"lateral mesoderm structural organisation","type":"exact"},{"name":"lateral plate mesoderm structural organization","type":"exact"}],"termid":"GO:0048381"}


id: FYPO:0003963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glutathione disulfide oxidoreductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal glutathione disulfide oxidoreductase activity","termid":"FYPO:0003963"}


id: MONDO:0011240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polymalfomative syndrome characterized by cutaneous capillary malformations, megalencephaly, cortical brain malformations (most distinctively polymicrogyria), abnormalities of somatic growth with body and brain asymmetry, developmental delay, and characteristic facial dysmorphism.","definition_xrefs":["Orphanet:60040"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete obsolete rare capillary malformation with associated anomalies (obsolete MONDO:0018719)","termid":"MONDO:0018719"},{"relation_name":"excluded_subClassOf","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"excluded_subClassOf","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","termid":"MONDO:0100283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"PIK3CA-related overgrowth spectrum","termid":"MONDO:1040002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"megalencephaly-capillary malformation-polymicrogyria syndrome","secondary_identifiers":["MEDGEN:355421","MESH:C536142","OMIM:602501","UMLS:C1865285","SCTID:703370002","GARD:6950","NANDO:2200823","NORD:1423","ICD9:759.89"],"synonyms":[{"name":"M-CM","type":"related"},{"name":"M-CMTC","type":"related"},{"name":"MCAP","type":"exact"},{"name":"MCM","type":"exact"},{"name":"MCMTC","type":"exact"},{"name":"Megalencephaly-Capillary Malformation","type":"exact"},{"name":"macrocephaly cutis marmorata telangiectatica congenita","type":"related"},{"name":"macrocephaly-capillary malformation","type":"related"},{"name":"macrocephaly-capillary malformation syndrome","type":"exact"},{"name":"macrocephaly-cutis marmorata telangiectatica congenita","type":"related"},{"name":"macrocephaly-cutis marmorata telangiectatica congenita syndrome","type":"exact"},{"name":"megalencephaly cutis marmorata telangiectatica congenita","type":"related"},{"name":"megalencephaly-capillary malformation syndrome","type":"exact"},{"name":"megalencephaly-capillary malformation-polymicrogyria syndrome","type":"exact"},{"name":"megalencephaly-capillary malformation-polymicrogyria syndrome, somatic","type":"exact"},{"name":"megalencephaly-cutis marmorata telangiectatica congenita","type":"related"},{"name":"megalencephaly-cutis marmorata telangiectatica congenita syndrome","type":"exact"},{"name":"megalocephaly cutis marmorata telangiectatica congenita","type":"related"}],"termid":"MONDO:0011240","xrefs":{"Monarch":{"xref_id":"0011240"}}}


id: MOD:01867
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems mTRAQ light reporter+balance group.","definition_xrefs":["Unimod:888#Y","OMSSA:210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"mTRAQ light reporter+balance reagent acylated residue","termid":"MOD:01864"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mTRAQ light reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"mTRAQ light","type":"related"},{"name":"mTRAQ light on Y","type":"exact"}],"termid":"MOD:01867"}


id: PR:Q9URU4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URU4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C1289.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.15","synonyms":[{"name":"Spom972h-pfl5","type":"exact"}],"termid":"PR:Q9URU4"}


id: GO:2000058
data:
  {"annotated_genes":["SJAG_02723","SJAG_00642","SJAG_03048","SJAG_02485","SJAG_00071","SJAG_03699","SJAG_00052","SJAG_00475","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[106750,77054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[88733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[111506,116867,102178,106457,108690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[114421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032434"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of proteolysis involved in protein catabolic process","termid":"GO:1903050"},{"relation_name":"regulates","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_01210":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein breakdown","type":"related"},{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein catabolic process","type":"related"},{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein catabolism","type":"related"},{"name":"regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein degradation","type":"related"},{"name":"regulation of protein degradation tagging activity","type":"related"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein breakdown","type":"exact"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein catabolic process","type":"related"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein catabolism","type":"exact"},{"name":"regulation of protein ubiquitination during ubiquitin-dependent protein degradation","type":"exact"},{"name":"regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolism","type":"exact"},{"name":"regulation of protein ubiquitylation during ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"regulation of protein ubiquitylation during ubiquitin-dependent protein catabolism","type":"exact"}],"termid":"GO:2000058","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:1905785":null,"GO:1905786":null}}


id: FYPO:0001601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"abnormal vacuole","termid":"FYPO:0002794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"altered level of substance in vacuole","synonyms":[{"name":"abnormal level of substance in vacuole","type":"exact"},{"name":"abnormal level of substance in vacuole during vegetative growth","type":"exact"},{"name":"abnormal vacuolar level of substance","type":"exact"},{"name":"altered level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"altered vacuolar level of substance","type":"exact"}],"termid":"FYPO:0001601"}


id: FYPO:0000305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which spore germination is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spore germination","termid":"FYPO:0000305"}


id: MONDO:0004641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"},{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin carcinoma in situ","secondary_identifiers":["DOID:8687","ICD9:232.7","ICD9:232.4","ICD9:232","ICD9:232.2","ICD9:232.9","SCTID:92749008","ICD9:232.0","ICD9:232.8","ICD10CM:D04","UMLS:C0154073","NCIT:C3640","ICD9:232.3","ICD9:232.5","MEDGEN:102308","ICD9:232.6"],"synonyms":[{"name":"carcinoma in situ of skin","type":"exact"},{"name":"carcinoma in situ of the skin","type":"exact"},{"name":"carcinoma in situ of zone of skin","type":"exact"},{"name":"carcinoma of skin stage 0","type":"exact"},{"name":"carcinoma of the skin stage 0","type":"exact"},{"name":"cutaneous carcinoma in situ","type":"exact"},{"name":"nonmelanoma carcinoma in situ","type":"exact"},{"name":"skin cancer stage 0","type":"exact"},{"name":"skin carcinoma in situ","type":"exact"},{"name":"skin carcinoma stage 0","type":"exact"},{"name":"stage 0 nonmelanoma skin carcinoma in situ","type":"exact"},{"name":"stage 0 skin cancer","type":"exact"},{"name":"stage 0 skin cancer aJCC v6","type":"exact"},{"name":"stage 0 skin cancer aJCC v7","type":"exact"},{"name":"stage 0 skin carcinoma","type":"exact"},{"name":"stage 0 zone of skin carcinoma","type":"exact"},{"name":"zone of skin carcinoma in situ","type":"exact"},{"name":"zone of skin in situ carcinoma","type":"exact"}],"termid":"MONDO:0004641","xrefs":{"Monarch":{"xref_id":"0004641"}}}


id: PBO:0045383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP4 divergent transcript","termid":"PBO:0045383"}


id: PBO:0013231
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_email","termid":"PBO:0013231"}


id: GO:0031770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a growth hormone-releasing hormone receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"growth hormone-releasing hormone receptor binding","synonyms":[{"name":"growth hormone-releasing hormone receptor ligand","type":"narrow"}],"termid":"GO:0031770"}


id: GO:1905682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of innate immunity memory response.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of innate immunity memory response","termid":"GO:1905680"},{"relation_name":"positively_regulates","term_name":"innate immunity memory response","termid":"GO:0090714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of innate immunity memory response","synonyms":[{"name":"activation of innate immunity memory response","type":"narrow"},{"name":"up regulation of innate immunity memory response","type":"exact"},{"name":"up-regulation of innate immunity memory response","type":"exact"},{"name":"upregulation of innate immunity memory response","type":"exact"}],"termid":"GO:1905682"}


id: PBO:0040835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BST2 interferon stimulated positive regulator","termid":"PBO:0040835"}


id: PBO:0055334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2762","termid":"PBO:0055334"}


id: PBO:0046104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 7","termid":"PBO:0046104"}


id: GO:0031973
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of a chromoplast envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid intermembrane space","termid":"GO:0009529"},{"relation_name":"part_of","term_name":"chromoplast envelope","termid":"GO:0031898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chromoplast intermembrane space","synonyms":[{"name":"chromoplast envelope lumen","type":"exact"}],"termid":"GO:0031973"}


id: PATO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located further from a more centrally located entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal to","synonyms":[{"name":"distal","type":"exact"}],"termid":"PATO:0001234"}


id: PBO:0001254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1640 family protein","termid":"PBO:0001254"}


id: MONDO:1010655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that occurs in llama.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycythemia, non-human animal","termid":"MONDO:1010078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycythemia, llama","secondary_identifiers":["OMIA:000809-9844"],"termid":"MONDO:1010655","xrefs":{"Monarch":{"xref_id":"1010655"}}}


id: PBO:0050158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 14","termid":"PBO:0050158"}


id: FYPO:0001091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to heat shock is normal (i.e. indistinguishable from wild type). Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"normal cellular response to heat shock","synonyms":[{"name":"normal cellular response to heat shock during mitotic cell cycle","type":"related"},{"name":"normal cellular response to heat shock during vegetative growth","type":"exact"}],"termid":"FYPO:0001091"}


id: GO:0004055
data:
  {"annotated_genes":["SJAG_04577"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70192],"is_not":false,"summary":null,"term":"GO:0004055"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate.","definition_xrefs":["EC:6.3.4.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"argininosuccinate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:10932","MetaCyc:ARGSUCCINSYN-RXN","Reactome:R-HSA-70577"],"synonyms":[{"name":"L-citrulline:L-aspartate ligase (AMP-forming)","type":"related"},{"name":"arginine succinate synthetase activity","type":"related"},{"name":"argininosuccinate synthetase activity","type":"related"},{"name":"argininosuccinic acid synthetase activity","type":"related"},{"name":"arginosuccinate synthetase activity","type":"related"},{"name":"citrulline--aspartate ligase activity","type":"related"}],"termid":"GO:0004055","terms_by_termid":{"GO:0004055":null}}


id: GO:0032063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation initiation, as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"negative regulation of translation in response to osmotic stress","termid":"GO:0032061"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to osmotic stress","termid":"GO:0043561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translational initiation in response to osmotic stress","synonyms":[{"name":"down regulation of translation initiation in response to osmotic stress","type":"exact"},{"name":"down-regulation of translation initiation in response to osmotic stress","type":"exact"},{"name":"downregulation of translation initiation in response to osmotic stress","type":"exact"},{"name":"inhibition of translation initiation in response to osmotic stress","type":"narrow"}],"termid":"GO:0032063"}


id: GO:0051503
data:
  {"annotated_genes":["SJAG_04328","SJAG_03334","SJAG_02050","SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[101157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[101158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[58923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[102649,58922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[92701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The directed movement of adenine nucleotides, ATP, ADP, and/or AMP, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transport","termid":"GO:0015865"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"adenine nucleotide transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0051503","terms_by_termid":{"GO:0015866":null,"GO:0140021":null,"GO:1990544":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null}}


id: MONDO:0018693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete kuru (obsolete MONDO:0018693)","termid":"MONDO:0018693","xrefs":{"Monarch":{"xref_id":"0018693"}}}


id: PBO:0045521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrobrevin beta","termid":"PBO:0045521"}


id: GO:0030058
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043799"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic amine + an acceptor (A) + H2O = an aldehyde + a reduced acceptor (AH2) + NH4+.","definition_xrefs":["RHEA:51128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"aliphatic amine dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MADH activity","type":"related"},{"name":"amine dehydrogenase activity","type":"broad"},{"name":"amine: (acceptor) oxidoreductase (deaminating)","type":"related"},{"name":"methylamine dehydrogenase activity","type":"related"},{"name":"primary-amine dehydrogenase activity","type":"broad"},{"name":"primary-amine:acceptor oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0030058","terms_by_termid":{"GO:0043799":null}}


id: PR:Q9P7M1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dep1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein dep1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.02c","synonyms":[{"name":"Spom972h-dep1","type":"exact"}],"termid":"PR:Q9P7M1"}


id: GO:0102294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + NAD+ = cholest-5-en-3-one + NADH + H+.","definition_xrefs":["RHEA:35459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-beta-hydroxy-Delta5-steroid dehydrogenase (NAD+) activity","termid":"GO:0003854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cholesterol dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:RXN-12693"],"termid":"GO:0102294"}


id: GO:1901196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of calcium-mediated signaling that is involved in cellular response to salt stress.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium-mediated signaling","termid":"GO:0050850"},{"relation_name":"part_of","term_name":"cellular response to salt stress","termid":"GO:0071472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of calcium-mediated signaling involved in cellular response to salt stress","synonyms":[{"name":"activation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"narrow"},{"name":"activation of calcium-mediated signaling involved in cellular response to salt stress","type":"narrow"},{"name":"activation of calcium-mediated signaling involved in cellular salinity response","type":"narrow"},{"name":"positive regulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"positive regulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"},{"name":"positive regulation of calcium-mediated signalling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"positive regulation of calcium-mediated signalling involved in cellular response to salt stress","type":"exact"},{"name":"positive regulation of calcium-mediated signalling involved in cellular salinity response","type":"exact"},{"name":"stimulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"narrow"},{"name":"stimulation of calcium-mediated signaling involved in cellular response to salt stress","type":"narrow"},{"name":"stimulation of calcium-mediated signaling involved in cellular salinity response","type":"narrow"},{"name":"up regulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"up regulation of calcium-mediated signaling involved in cellular response to salt stress","type":"exact"},{"name":"up regulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"},{"name":"up-regulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"up-regulation of calcium-mediated signaling involved in cellular response to salt stress","type":"exact"},{"name":"up-regulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"},{"name":"upregulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"upregulation of calcium-mediated signaling involved in cellular response to salt stress","type":"exact"},{"name":"upregulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"}],"termid":"GO:1901196"}


id: MONDO:0008636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Double uterus, hemivagina and renal agenesis is a rare congenital urogenital anomaly characterized by the presence of double uterus (didelphys, bicornuate or septum-complete or partial), unilateral cervico-vaginal obstruction (obstructed hemivagina-communicant, not communicant or septate and unilateral cervical atresia) and ipsilateral renal anomalies (renal agenesis and/or other urinary tract anomalies). Patients are usually diagnosed at puberty after menarche due to recurrent severe dysmenorrhea, chronic pelvic pain, excessive foul smelling mucopurulent discharge, spotting and intermenstrual bleeding (depending on the existence of uterine or vaginal communications). fever, dyspareunia, and a palpable abdominal, pelvic or vaginal mass (mucocolpos or pyocolpos) may also be present.","definition_xrefs":["Orphanet:3411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double uterus-hemivagina-renal agenesis syndrome","secondary_identifiers":["MESH:C566010","OMIM:192050","MEDGEN:348132","GARD:1910","SCTID:722431007","UMLS:C1860549"],"synonyms":[{"name":"Double uterus and obstructed hemivagina syndrome","type":"exact"},{"name":"Herlyn-Werner syndrome","type":"exact"},{"name":"OHVIRA syndrome","type":"exact"},{"name":"Wunderlich syndrome","type":"exact"},{"name":"obstructed hemivagina and ipsilateral renal anomaly","type":"exact"},{"name":"uterus BICORNIS BICOLLIS with partial vaginal septum and unilateral HEMATOCOLPOS with ipsilateral renal agenesis","type":"related"}],"termid":"MONDO:0008636","xrefs":{"Monarch":{"xref_id":"0008636"}}}


id: GO:1902039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of seed dormancy process.","definition_xrefs":["PMID:23378449","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of seed dormancy process","termid":"GO:2000033"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"seed dormancy process","termid":"GO:0010162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of seed dormancy process","synonyms":[{"name":"down regulation of seed dormancy","type":"related"},{"name":"down regulation of seed dormancy process","type":"exact"},{"name":"down-regulation of seed dormancy","type":"related"},{"name":"down-regulation of seed dormancy process","type":"exact"},{"name":"downregulation of seed dormancy","type":"related"},{"name":"downregulation of seed dormancy process","type":"exact"},{"name":"inhibition of seed dormancy","type":"related"},{"name":"inhibition of seed dormancy process","type":"narrow"},{"name":"negative regulation of seed dormancy","type":"related"}],"termid":"GO:1902039"}


id: MONDO:0010855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short tarsus - absence of lower eyelashes is a very rare syndrome characterized by the association of thin and short upper and lower tarsus and absence of the lower eyelashes.","definition_xrefs":["Orphanet:2832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short tarsus-absence of lower eyelashes syndrome","secondary_identifiers":["OMIM:600269","GARD:296","SCTID:721075001","UMLS:C1838328","MEDGEN:325001","MESH:C537036"],"synonyms":[{"name":"Lopes Gorlin syndrome","type":"related"},{"name":"Lopes-Gorlin syndrome","type":"exact"},{"name":"short tarsus absence of lower eyelashes","type":"related"},{"name":"short tarsus with absence of LOWER eyelashes","type":"related"},{"name":"stale","type":"related"}],"termid":"MONDO:0010855","xrefs":{"Monarch":{"xref_id":"0010855"}}}


id: PBO:0111063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, antisense ubp8","termid":"PBO:0111063"}


id: GO:0000900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Antagonizes the ribosome-mediated translation of mRNA into a polypeptide via direct binding (through a selective and non-covalent interaction) to nucleic acid.","definition_xrefs":["PMID:29061112","GOC:clt","GOC:vw","PMID:7523370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation repressor activity","termid":"GO:0030371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0045182","GO:0003674"],"is_obsolete":false,"name":"mRNA regulatory element binding translation repressor activity","secondary_identifiers":["Reactome:R-HSA-5690886"],"synonyms":[{"name":"translation repressor activity, mRNA regulatory element binding","type":"exact"},{"name":"translation repressor activity, nucleic acid binding","type":"broad"}],"termid":"GO:0000900"}


id: RO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"RO:0002013"},{"relation_name":"is_a","term_name":"positively_regulated_by","termid":"RO:0002336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_positive_regulatory_component_activity","termid":"RO:0002015"}


id: MONDO:1012915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis that occurs in Rhesus monkey due to a mutation in the TARDBP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iatrogenic disease, non-human animal","termid":"MONDO:1011322"},{"relation_name":"is_a","term_name":"amyotrophic lateral sclerosis, non-human animal","termid":"MONDO:1012954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis, TARDBP-related, Rhesus monkey","secondary_identifiers":["OMIA:002492-9544"],"termid":"MONDO:1012915","xrefs":{"Monarch":{"xref_id":"1012915"}}}


id: SO:1000046
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal inversion that includes the centromere.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"pericentric","termid":"SO:0001518"},{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentric_inversion","synonyms":[{"name":"pericentric inversion","type":"exact"}],"termid":"SO:1000046"}


id: GO:0051630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of acetylcholine into a cell, typically presynaptic neurons or glial cells. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine transport","termid":"GO:0015870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"acetylcholine uptake","synonyms":[{"name":"acetylcholine import","type":"exact"}],"termid":"GO:0051630"}


id: GO:0018213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-valine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-valine modification","termid":"GO:0018213"}


id: GO:0021783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a preganglionic parasympathetic fiber over time, from its formation to the mature structure. A preganglionic parasympathetic fiber is a cholinergic axonal fiber projecting from the CNS to a parasympathetic ganglion.","definition_xrefs":["GOC:cjm","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"},{"relation_name":"part_of","term_name":"parasympathetic nervous system development","termid":"GO:0048486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}


id: PBO:0048321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 32","termid":"PBO:0048321"}


id: GO:1904287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein-pyridoxal-5-phosphate linkage.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25957689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein-pyridoxal-5-phosphate linkage","termid":"GO:1904285"},{"relation_name":"positively_regulates","term_name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein-pyridoxal-5-phosphate linkage","synonyms":[{"name":"activation of protein-pyridoxal-5-phosphate linkage","type":"narrow"},{"name":"stimulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"up regulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"up-regulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"upregulation of protein-pyridoxal-5-phosphate linkage","type":"exact"}],"termid":"GO:1904287"}


id: GO:0035920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a high voltage-gated calcium channel in another organism. A high voltage-gated channel is a channel whose open state is dependent on high voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:bf","GOC:fj","PMID:20920515","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of high voltage-gated calcium channel activity in another organism (obsolete GO:0035920)","synonyms":[{"name":"down-regulation of high voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"downregulation of high voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"inhibition of high voltage-gated calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of high voltage gated calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of high voltage-dependent calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of high voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035920"}


id: GO:1903481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of actin filament organization involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly (obsolete GO:1903481)","synonyms":[{"name":"down regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"down regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"down regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"down-regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"down-regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"down-regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"downregulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"downregulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"downregulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"inhibition of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"inhibition of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"inhibition of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"negative regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"negative regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903481"}


id: GO:0015771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of trehalose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Trehalose is a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.","definition_xrefs":["PMID:20035867","PMID:17606922","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"trehalose transport","termid":"GO:0015771"}


id: GO:0016277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + (myelin basic protein)-arginine = S-adenosyl-L-homocysteine + (myelin basic protein)-N(omega)-methyl-arginine.","definition_xrefs":["PMID:6177833"],"gene_count":0,"genotype_count":0,"name":"obsolete [myelin basic protein]-arginine N-methyltransferase activity (obsolete GO:0016277)","termid":"GO:0016277"}


id: GO:1905343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cohesin unloading.","definition_xrefs":["PMID:26687354","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cohesin unloading (obsolete GO:1905343)","termid":"GO:1905343"}


id: MONDO:0016742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor of the central nervous system characterized by the presence of at least two types of germ cell neoplasia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed extragonadal germ cell cancer","termid":"MONDO:0000524"},{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mixed germ cell tumor of central nervous system","secondary_identifiers":["GARD:20736","MEDGEN:233713","Orphanet:252021","UMLS:C1334785","NCIT:C7016"],"synonyms":[{"name":"CNS mixed germ cell tumor","type":"exact"},{"name":"CNS mixed germ cell tumour","type":"exact"},{"name":"central nervous system mixed germ cell tumor","type":"exact"},{"name":"central nervous system mixed germ cell tumour","type":"exact"},{"name":"mixed germ cell neoplasm of the central nervous system","type":"exact"},{"name":"mixed germ cell tumor of CNS","type":"exact"},{"name":"mixed germ cell tumor of the CNS","type":"exact"},{"name":"mixed germ cell tumor of the central nervous system","type":"exact"},{"name":"mixed germ cell tumour of CNS","type":"exact"},{"name":"mixed germ cell tumour of the CNS","type":"exact"},{"name":"mixed germ cell tumour of the central nervous system","type":"exact"}],"termid":"MONDO:0016742","xrefs":{"Monarch":{"xref_id":"0016742"}}}


id: PBO:0049346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 4","termid":"PBO:0049346"}


id: MONDO:0009802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteodysplasty, precocious, of Danks, Mayne, and Kozlowski","secondary_identifiers":["OMIM:259270","UMLS:C1850185","MEDGEN:337989","MESH:C564922"],"synonyms":[{"name":"Danks Mayne Kozlowski precocious osteodysplasty","type":"related"},{"name":"osteodysplasty precocious of Danks Mayne and Kozlowski","type":"related"},{"name":"osteodysplasty, precocious, of Danks, Mayne, and Kozlowski","type":"exact"}],"termid":"MONDO:0009802","xrefs":{"Monarch":{"xref_id":"0009802"}}}


id: PBO:0113435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific protein with a leucine zipper motif; subunit of the MIS complex which controls mRNA methylation during the induction of sporulation; homologous to human ZCH13H3, a subunit of the mammalian m6A methyltransferase complex","termid":"PBO:0113435"}


id: FYPO:0004859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more polysaccharides measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"},{"relation_name":"is_a","term_name":"altered level of substance in cell wall during vegetative growth","termid":"FYPO:0002627"},{"relation_name":"output_of","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased cell wall polysaccharide level","synonyms":[{"name":"increased cell wall polysaccharide accumulation","type":"related"},{"name":"increased cell wall polysaccharide level during mitotic cell cycle","type":"related"},{"name":"increased cell wall polysaccharide level during vegetative growth","type":"exact"}],"termid":"FYPO:0004859"}


id: MONDO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the supraglottic area of the larynx. The vast majority of cases are squamous cell carcinomas.","definition_xrefs":["NCIT:C3545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"},{"relation_name":"is_a","term_name":"supraglottis neoplasm","termid":"MONDO:0004427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"supraglottis cancer","secondary_identifiers":["ICD10CM:C32.1","MEDGEN:57561","SCTID:187842004","UMLS:C0153484","ICD9:161.1","DOID:13476"],"synonyms":[{"name":"Ca larynx - supraglottis","type":"exact"},{"name":"cancer of supraglottic part of larynx","type":"exact"},{"name":"malignant neoplasm of extrinsic larynx","type":"exact"},{"name":"malignant neoplasm of supraglottic part of larynx","type":"exact"},{"name":"malignant neoplasm of supraglottis","type":"exact"},{"name":"malignant neoplasm of the supraglottis","type":"exact"},{"name":"malignant supraglottic neoplasm","type":"exact"},{"name":"malignant supraglottic part of larynx neoplasm","type":"exact"},{"name":"malignant supraglottic tumor","type":"exact"},{"name":"malignant supraglottic tumour","type":"exact"},{"name":"malignant supraglottis neoplasm","type":"exact"},{"name":"malignant supraglottis tumor","type":"exact"},{"name":"malignant supraglottis tumour","type":"exact"},{"name":"malignant tumor of supraglottis","type":"exact"},{"name":"malignant tumor of the supraglottis","type":"exact"},{"name":"malignant tumour of supraglottis","type":"exact"},{"name":"malignant tumour of the supraglottis","type":"exact"},{"name":"supraglottic part of larynx cancer","type":"exact"}],"termid":"MONDO:0001724","xrefs":{"Monarch":{"xref_id":"0001724"}}}


id: PBO:0080733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing oxidoreductase","termid":"PBO:0080733"}


id: PBO:0031453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched_nuclear_inner_membrane","termid":"PBO:0031453"}


id: PBO:0059093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 (pseudogene)","termid":"PBO:0059093"}


id: PBO:0084632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase involved in methylation of histone H4 Lys5, -8, -12; S-adenosylmethionine-dependent; zinc-finger protein, contains one canonical and two unusual fingers in unusual arrangements; deletion enhances replication of positive-strand RNA virus","termid":"PBO:0084632"}


id: GO:0060238
data:
  {"annotated_genes":["SJAG_00990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of pheromone-dependent signal transduction during conjugation with cellular fusion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of conjugation with cellular fusion","termid":"GO:0031137"},{"relation_name":"regulates","term_name":"signal transduction involved in positive regulation of conjugation with cellular fusion","termid":"GO:0032005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0000747"],"is_obsolete":false,"name":"regulation of signal transduction involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060238","terms_by_termid":{"GO:0090029":null}}


id: PBO:0068029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 334","termid":"PBO:0068029"}


id: GO:0071343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the process in which a contractile ring is assembled in a specific location.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of establishment of actomyosin contractile ring localization (obsolete GO:0071343)","synonyms":[{"name":"negative regulation of establishment of actomyosin contractile ring localization","type":"exact"},{"name":"negative regulation of establishment of contractile ring localisation involved in cell cycle cytokinesis","type":"exact"},{"name":"negative regulation of establishment of contractile ring localization involved in cell cycle cytokinesis","type":"exact"},{"name":"negative regulation of establishment of contractile ring localization involved in cytokinesis during cell cycle","type":"related"}],"termid":"GO:0071343"}


id: PBO:0075282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 22","termid":"PBO:0075282"}


id: GO:0090129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the extent of synapse maturation, the process that organizes a synapse so that it attains its fully functional state.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of synapse maturation","termid":"GO:0090128"},{"relation_name":"positively_regulates","term_name":"synapse maturation","termid":"GO:0060074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synapse maturation","termid":"GO:0090129"}


id: PBO:0015658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear 3'-tRNA processing endonuclease tRNAse Z, Trz1","termid":"PBO:0015658"}


id: PBO:0047449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIIb","termid":"PBO:0047449"}


id: GO:0061454
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108464],"is_not":false,"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The directed movement of calcium ions (Ca2+) out of the Golgi apparatus into the cytosol.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"},{"relation_name":"is_a","term_name":"Golgi calcium ion transmembrane transport","termid":"GO:0061856"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol by Golgi","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi calcium ion export","type":"broad"}],"termid":"GO:0061454","terms_by_termid":{"GO:0061454":null}}


id: GO:0008509
data:
  {"annotated_genes":["SJAG_00048","SJAG_01973","SJAG_01168","SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[78879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903425"},{"annotations":[73276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[71494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a negatively charged ion from one side of a membrane to the other.","definition_xrefs":["GOC:dgf","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transporter activity","termid":"GO:0015075"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_01168":null,"SJAG_01973":null,"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"monoatomic anion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-166214"],"synonyms":[{"name":"anion transmembrane transporter activity","type":"broad"},{"name":"anion transporter activity","type":"exact"}],"termid":"GO:0008509","terms_by_termid":{"GO:0005254":null,"GO:0008308":null,"GO:0015379":null,"GO:1903425":null}}


id: MONDO:0002626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a accessory XI nerve spinal component.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"},{"relation_name":"is_a","term_name":"accessory nerve disorder","termid":"MONDO:0002636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal accessory nerve neoplasm","secondary_identifiers":["MEDGEN:266074","NCIT:C5829","UMLS:C1263902","ICD9:239.7","SCTID:126977003","DOID:337"],"synonyms":[{"name":"XIth cranial nerve neoplasms","type":"exact"},{"name":"XIth cranial nerve tumors","type":"exact"},{"name":"XIth cranial nerve tumours","type":"exact"},{"name":"accessory XI nerve spinal component neoplasm","type":"exact"},{"name":"accessory XI nerve spinal component neoplasm (disease)","type":"exact"},{"name":"accessory XI nerve spinal component tumor","type":"exact"},{"name":"accessory XI nerve spinal component tumour","type":"exact"},{"name":"accessory nerve neoplasm","type":"exact"},{"name":"eleventh cranial nerve neoplasm","type":"exact"},{"name":"eleventh cranial nerve neoplasms","type":"exact"},{"name":"eleventh cranial nerve tumor","type":"exact"},{"name":"eleventh cranial nerve tumors","type":"exact"},{"name":"eleventh cranial nerve tumour","type":"exact"},{"name":"eleventh cranial nerve tumours","type":"exact"},{"name":"neoplasm of accessory XI nerve spinal component","type":"exact"},{"name":"neoplasm of accessory nerve","type":"exact"},{"name":"neoplasm of eleventh cranial nerve","type":"exact"},{"name":"neoplasm of spinal accessory nerve","type":"exact"},{"name":"neoplasm of the eleventh cranial nerve","type":"exact"},{"name":"neoplasm of the spinal accessory nerve","type":"exact"},{"name":"spinal accessory nerve neoplasm","type":"exact"},{"name":"spinal accessory nerve neoplasms","type":"exact"},{"name":"spinal accessory nerve tumor","type":"exact"},{"name":"spinal accessory nerve tumors","type":"exact"},{"name":"spinal accessory nerve tumour","type":"exact"},{"name":"spinal accessory nerve tumours","type":"exact"},{"name":"tumor of accessory XI nerve spinal component","type":"exact"},{"name":"tumor of eleventh cranial nerve","type":"exact"},{"name":"tumor of spinal accessory nerve","type":"exact"},{"name":"tumor of the eleventh cranial nerve","type":"exact"},{"name":"tumor of the spinal accessory nerve","type":"exact"},{"name":"tumour of accessory XI nerve spinal component","type":"exact"},{"name":"tumour of eleventh cranial nerve","type":"exact"},{"name":"tumour of spinal accessory nerve","type":"exact"},{"name":"tumour of the eleventh cranial nerve","type":"exact"},{"name":"tumour of the spinal accessory nerve","type":"exact"}],"termid":"MONDO:0002626","xrefs":{"Monarch":{"xref_id":"0002626"}}}


id: PBO:0067005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 11, pseudogene","termid":"PBO:0067005"}


id: PBO:0088546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR2-SEACAT complex ubiquitin-protein ligase E3 subunit Sea4","termid":"PBO:0088546"}


id: PBO:0073325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 1","termid":"PBO:0073325"}


id: PBO:0074938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 103C","termid":"PBO:0074938"}


id: PBO:0055740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox transcription factor 1 alpha","termid":"PBO:0055740"}


id: PR:O74780
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC25B2.08 gene.","definition_xrefs":["UniProtKB:O74780","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C25B2.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.08","synonyms":[{"name":"Spom972h-SPBC25B2.08","type":"exact"}],"termid":"PR:O74780"}


id: PBO:0045470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D5 pseudogene 2","termid":"PBO:0045470"}


id: PBO:0053203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 2","termid":"PBO:0053203"}


id: PBO:0065787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase catalytic subunit 1","termid":"PBO:0065787"}


id: GO:1904683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metalloendopeptidase activity.","definition_xrefs":["PMID:18591254","GO_REF:0000059","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"},{"relation_name":"is_a","term_name":"regulation of metallopeptidase activity","termid":"GO:1905048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metalloendopeptidase activity","synonyms":[{"name":"regulation of metalloendoprotease activity","type":"narrow"},{"name":"regulation of metalloendoproteinase activity","type":"narrow"}],"termid":"GO:1904683"}


id: GO:0021903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural tube is divided into specific regions along the rostrocaudal axis.","definition_xrefs":["PMID:11262869","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"neural tube patterning","termid":"GO:0021532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rostrocaudal neural tube patterning","synonyms":[{"name":"anterior-posterior neural tube patterning","type":"related"}],"termid":"GO:0021903"}


id: PBO:0039721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOBEC3B antisense RNA 1","termid":"PBO:0039721"}


id: PBO:0055761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA imatinib upregulated","termid":"PBO:0055761"}


id: PBO:0088603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase","termid":"PBO:0088603"}


id: PBO:0031794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_cell_cycle_phase","termid":"PBO:0031794"}


id: GO:0034225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is deprived of zinc ions.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation (obsolete GO:0034225)","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter in response to zinc deficiency","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter in response to zinc ion limitation","type":"exact"}],"termid":"GO:0034225"}


id: PBO:0109608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A20","termid":"PBO:0109608"}


id: FYPO:0002706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cordycepin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cordycepin","synonyms":[{"name":"resistance to cordycepin during mitotic cell cycle","type":"related"},{"name":"resistance to cordycepin during vegetative growth","type":"exact"},{"name":"resistant to cordycepin","type":"exact"}],"termid":"FYPO:0002706"}


id: PBO:0059553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Thr (ACN)","termid":"PBO:0059553"}


id: PBO:0061278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1","termid":"PBO:0061278"}


id: GO:0071947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more ubiquitin groups from a protein as part of a process of ubiquitin-dependent protein catabolism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"},{"relation_name":"part_of","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0030163","GO:0070647"],"is_obsolete":false,"name":"protein deubiquitination involved in ubiquitin-dependent protein catabolic process","termid":"GO:0071947"}


id: GO:0070652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that localizes to interphase centrosomes and to mitotic spindle tubules and regulates mitotic spindle assembly and centrosome integrity; in human, the complex consists of eight subunits, some of which are homologous to subunits of the Drosophila Augmin complex.","definition_xrefs":["PMID:19427217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"HAUS complex","synonyms":[{"name":"HAUS augmin complex","type":"exact"}],"termid":"GO:0070652"}


id: GO:0006306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.","definition_xrefs":["ISBN:0198506732","GOC:ems"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation (obsolete GO:0006306)","secondary_identifiers":["Wikipedia:DNA_methylation"],"termid":"GO:0006306"}


id: FYPO:0004426
data:
  {"alleles_by_uniquename":{"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dephosphorylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03940":null},"genotype_count":1,"genotypes_by_uniquename":{"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein dephosphorylation","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940"],"single_locus_genotype_uniquenames":["nem2delta"],"termid":"FYPO:0004426","terms_by_termid":{"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: PATO:0000744
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000744 balance value (obsolete PATO:0000744)","termid":"PATO:0000744"}


id: SO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The coding exon that is most 3-prime on a given transcript.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_exon","termid":"SO:0000195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon","synonyms":[{"name":"3' coding exon","type":"related"},{"name":"three prime coding exon","type":"exact"}],"termid":"SO:0000202"}


id: GO:0070952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a gram-positive bacterium, the directed killing of a gram-positive bacterium by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"},{"relation_name":"regulates","term_name":"neutrophil-mediated killing of gram-positive bacterium","termid":"GO:0070946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated killing of gram-positive bacterium","termid":"GO:0070952"}


id: PBO:0014311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, involved in diphthamide biosynthesis Dph7 (predicted)","termid":"PBO:0014311"}


id: PBO:0065759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin and HIN domain family member 5, pseudogene","termid":"PBO:0065759"}


id: PBO:0028097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_phosphorylation_during_mitotic_G2_phase","termid":"PBO:0028097"}


id: PBO:0065931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 5","termid":"PBO:0065931"}


id: PR:P87231
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A crossover junction endonuclease MUS81 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04324","PANTHER:PTHR13451:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crossover junction endonuclease mus81 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.05c","secondary_identifiers":["UniProtKB:P87231"],"synonyms":[{"name":"Spom972h-MUS81","type":"exact"}],"termid":"PR:P87231"}


id: MONDO:0010361
data:
  {"annotated_genes":["SJAG_00845","SJAG_02878"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86842,86843],"is_not":false,"summary":null,"term":"MONDO:0010361"}]},"cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the PAK3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02878":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 30","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22682","OMIM:300558","MEDGEN:163235","DOID:0112051","UMLS:C0796237"],"synonyms":[{"name":"MRX30","type":"related"},{"name":"PAK3 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"intellectual developmental disorder, X-linked 30, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 30","type":"exact"},{"name":"intellectual disability, X-linked 47","type":"related"},{"name":"intellectual disability, X-linked type 30","type":"exact"},{"name":"mental retardation, X-linked 30","type":"related"},{"name":"mental retardation, X-linked 47","type":"related"},{"name":"mental retardation, X-linked type 30","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in PAK3","type":"exact"}],"termid":"MONDO:0010361","terms_by_termid":{"MONDO:0010361":null},"xrefs":{"Monarch":{"xref_id":"0010361"}}}


id: GO:0010088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the principal food-conducting tissue of a vascular plant.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phloem or xylem histogenesis","termid":"GO:0010087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phloem development","synonyms":[{"name":"phloem histogenesis","type":"exact"}],"termid":"GO:0010088"}


id: GO:0048775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leucophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"leucophore differentiation","termid":"GO:0048772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leucophore differentiation","termid":"GO:0048775"}


id: PBO:0086154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for pre-mRNA splicing; associates with the spliceosome and interacts with splicing factors Prp22p and Prp46p; orthologous to human transcriptional coactivator SKIP and can activate transcription of a reporter gene","termid":"PBO:0086154"}


id: MONDO:0015121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of eye neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare eye tumor (obsolete MONDO:0015121)","secondary_identifiers":["Orphanet:101950"],"synonyms":[{"name":"rare eye neoplasm","type":"exact"}],"termid":"MONDO:0015121","xrefs":{"Monarch":{"xref_id":"0015121"}}}


id: GO:0033639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to water (obsolete GO:0033639)","termid":"GO:0033639"}


id: FYPO:0005578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intergenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intergenic meiotic recombination reflects crossovers between homologous chromosomes.","definition_xrefs":["PMID:25579976","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal intergenic meiotic recombination","synonyms":[{"name":"normal meiotic intergenic recombination","type":"exact"}],"termid":"FYPO:0005578"}


id: GO:0015654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of tellurite from one side of a membrane to the other. Tellurite is a salt of tellurous acid or an oxide of tellurium which occurs sparingly in tufts of white or yellowish crystals.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"tellurite transmembrane transporter activity","secondary_identifiers":["GO:0015118"],"synonyms":[{"name":"tellurite uptake transmembrane transporter activity","type":"related"},{"name":"tellurite-resistance uptake permease activity","type":"related"},{"name":"tellurite-resistance uptake transmembrane transporter activity","type":"related"}],"termid":"GO:0015654"}


id: FYPO:0007307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation at centromere during vegetative growth","termid":"FYPO:0000893"},{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3K14 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K14 acetylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K14 acetylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007307"}


id: GO:0047451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-3-hydroxyoctanoyl-[acyl-carrier protein] = H2O + (2E)-octenoyl-[acyl-carrier protein].","definition_xrefs":["PMID:8910376"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity (obsolete GO:0047451)","synonyms":[{"name":"(3R)-3-hydroxyoctanoyl-[acyl-carrier-protein] hydro-lyase activity","type":"related"},{"name":"3-hydroxyoctanoyl-ACP dehydratase activity","type":"exact"},{"name":"3-hydroxyoctanoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity","type":"broad"}],"termid":"GO:0047451"}


id: GO:1901722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation involved in kidney development.","definition_xrefs":["GOC:TermGenie","PMID:18182616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"}


id: GO:0006889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the concentration of calcium in the endoplasmic reticulum.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium in ER (obsolete GO:0006889)","synonyms":[{"name":"regulation of calcium in ER","type":"exact"}],"termid":"GO:0006889"}


id: PBO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 2 pseudogene 1","termid":"PBO:0043579"}


id: GO:0050024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-galactono-1,4-lactone + O2 = L-ascorbate + H2O2 + H+.","definition_xrefs":["RHEA:20617","EC:1.3.3.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-galactonolactone oxidase activity","secondary_identifiers":["MetaCyc:1.3.3.12-RXN","GO:0033733","KEGG_REACTION:R00643"],"synonyms":[{"name":"L-galactono-1,4-lactone oxidase activity","type":"related"},{"name":"L-galactono-1,4-lactone:oxygen 3-oxidoreductase activity","type":"related"},{"name":"L-xylono-1,4-lactone oxidase activity","type":"related"}],"termid":"GO:0050024"}


id: GO:1902172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of keratinocyte apoptotic process.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","GOC:mtg_apoptosis","PMID:18938133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"keratinocyte apoptotic process","termid":"GO:0097283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of keratinocyte apoptotic process","synonyms":[{"name":"regulation of keratinocyte apoptosis","type":"narrow"}],"termid":"GO:1902172"}


id: PBO:0086306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with homology to human PDCD5; PDCD5 is involved in programmed cell death; N-terminal region forms a conserved triple-helix bundle structure; overproduction suppresses lethality due to expression of the dominant PET9 allele AAC2-A128P; overexpression promotes H2O2-induced apoptosis; YMR074C is not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0086306"}


id: PBO:0070159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 73 pseudogene","termid":"PBO:0070159"}


id: MONDO:0006419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precancerous neoplastic process that affects the small intestine. It is characterized by low or high grade dysplasia of the mucosal epithelium. There is no evidence of invasion.","definition_xrefs":["NCIT:C27462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neoplasm","termid":"MONDO:0004251"},{"relation_name":"is_a","term_name":"colorectal neoplasm","termid":"MONDO:0005335"},{"relation_name":"is_a","term_name":"intraepithelial neoplasia","termid":"MONDO:0024474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"small intestinal intraepithelial neoplasia","secondary_identifiers":["MEDGEN:236822","UMLS:C1335999"],"synonyms":[{"name":"small intestinal dysplasia","type":"exact"},{"name":"small intestinal intraepithelial neoplasia","type":"exact"}],"termid":"MONDO:0006419","xrefs":{"Monarch":{"xref_id":"0006419"}}}


id: FYPO:0004740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the position, composition or morphology of the of the actomyosin contractile ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal actomyosin contractile ring","synonyms":[{"name":"normal actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring during vegetative growth","type":"exact"}],"termid":"FYPO:0004740"}


id: PBO:0070979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 3","termid":"PBO:0070979"}


id: PBO:0029626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_sister_chromatid_cohesion","termid":"PBO:0029626"}


id: PBO:0063672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 1","termid":"PBO:0063672"}


id: MONDO:0003325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ganglioneuroblastoma characterized by the presence of neuroblastic cells in a Schwannian stroma, and the formation of hemorrhagic neuroblastic nodules.","definition_xrefs":["NCIT:C42058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglioneuroblastoma","termid":"MONDO:0005035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nodular ganglioneuroblastoma","secondary_identifiers":["DOID:5193","MEDGEN:309203","UMLS:C1517445"],"synonyms":[{"name":"ganglioneuroblastoma, nodular","type":"exact"}],"termid":"MONDO:0003325","xrefs":{"Monarch":{"xref_id":"0003325"}}}


id: PBO:0067852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 154","termid":"PBO:0067852"}


id: MONDO:0030475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 11, autosomal, with male infertility","secondary_identifiers":["UMLS:C5562019","MEDGEN:1794229","OMIM:619608"],"synonyms":[{"name":"HTX11","type":"exact"}],"termid":"MONDO:0030475","xrefs":{"Monarch":{"xref_id":"0030475"}}}


id: MOD:00711
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces three hydrogen atoms with three methyl groups, after a proton has been added to form an aminium group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trimethylated residue","termid":"MOD:00430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"trimethylated protonated-residue","synonyms":[{"name":"Me3+Res","type":"exact"}],"termid":"MOD:00711"}


id: PBO:0018104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name description Alpha Amylase Homolog","termid":"PBO:0018104"}


id: PBO:0086731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant displays elevated sensitivity to expression of a mutant huntingtin fragment or of alpha-synuclein; YGL262W is not an essential gene","termid":"PBO:0086731"}


id: PBO:0109624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABA type A receptor associated protein like 3 (pseudogene)","termid":"PBO:0109624"}


id: GO:0035806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change that affects blood coagulation in another organism. Blood coagulation is the sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot.","definition_xrefs":["GOC:fj","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of blood coagulation in another organism (obsolete GO:0035806)","synonyms":[{"name":"modulation by organism of blood clotting in other organism","type":"exact"},{"name":"modulation by organism of blood coagulation in other organism","type":"exact"},{"name":"modulation of blood coagulation in another organism","type":"exact"},{"name":"modulation of blood coagulation in other organism","type":"exact"},{"name":"perturbation of blood clotting in another organism","type":"exact"},{"name":"regulation by organism of blood clotting in other organism","type":"exact"},{"name":"regulation of blood clotting in other organism","type":"exact"},{"name":"regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0035806"}


id: FYPO:0004138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in telomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at telomere during vegetative growth","termid":"FYPO:0005064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at telomere during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at telomere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at telomere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"increased telomeric histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004138"}


id: PBO:0061354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 12","termid":"PBO:0061354"}


id: MONDO:0005813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic proliferation of spindle to ovoid cells which show phenotypic features similar to those of interdigitating dendritic cells. The clinical course is generally aggressive. (WHO, 2008)","definition_xrefs":["NCIT:C9282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell sarcoma","termid":"MONDO:0004380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"interdigitating dendritic cell sarcoma","secondary_identifiers":["ICDO:9757/1","DOID:7848","ICDO:9757/3","NANDO:2200035","SCTID:715664005","icd11.foundation:2024362257","MEDGEN:266040","MESH:D054739","icd11.foundation:214592620","ONCOTREE:IDCS","EFO:0007329","UMLS:C1260326"],"synonyms":[{"name":"interdigitating Dendritic cell sarcoma","type":"exact"},{"name":"interdigitating Dendritic cell sarcoma/tumor","type":"exact"},{"name":"interdigitating cell sarcoma","type":"broad"},{"name":"interdigitating cell sarcoma/tumor","type":"exact"}],"termid":"MONDO:0005813","xrefs":{"Monarch":{"xref_id":"0005813"}}}


id: PBO:0046630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 11","termid":"PBO:0046630"}


id: GO:0004522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"ribonuclease A activity","secondary_identifiers":["Wikipedia:Ribonuclease_A"],"synonyms":[{"name":"RNase A activity","type":"related"},{"name":"RNase I activity","type":"related"},{"name":"RNase activity","type":"broad"},{"name":"S-genotype-assocd. glycoproteins","type":"related"},{"name":"SLSG glycoproteins","type":"related"},{"name":"alkaline ribonuclease activity","type":"exact"},{"name":"ceratitis capitata alkaline ribonuclease activity","type":"exact"},{"name":"endoribonuclease I","type":"related"},{"name":"gene S glycoproteins","type":"related"},{"name":"gene S locus-specific glycoproteins","type":"related"},{"name":"pancreatic RNase activity","type":"related"},{"name":"pancreatic ribonuclease activity","type":"narrow"},{"name":"ribonuclease I activity","type":"related"},{"name":"ribonucleate 3'-pyrimidino-oligonucleotidohydrolase activity","type":"exact"},{"name":"ribonucleic phosphatase activity","type":"exact"}],"termid":"GO:0004522"}


id: PBO:0086370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl alcohol dehydrogenase; localizes to cytosol; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance","termid":"PBO:0086370"}


id: MONDO:0007838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multiple congenital anomaly/intellectual disability contiguous gene syndrome caused by partial deletion of the long arm of chromosome 11.","definition_xrefs":["Orphanet:2308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 11","termid":"MONDO:0016910"},{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Jacobsen syndrome","secondary_identifiers":["SCTID:715438008","DOID:0111723","GARD:307","icd11.foundation:27788176","OMIM:147791","UMLS:C0795841","NCIT:C75457","MEDGEN:162878"],"synonyms":[{"name":"11q terminal deletion disorder","type":"exact"},{"name":"Del(11)(q23.3)","type":"exact"},{"name":"Del(11)(qter)","type":"exact"},{"name":"JBS","type":"related"},{"name":"Jacobsen syndrome","type":"exact"},{"name":"Jacobsen syndrome, Isolated cases","type":"exact"},{"name":"chromosome 11q deletion syndrome","type":"related"},{"name":"distal deletion 11q","type":"exact"},{"name":"distal monosomy 11q","type":"exact"},{"name":"monosomy 11qter","type":"exact"},{"name":"partial 11q monosomy syndrome","type":"related"},{"name":"telomeric deletion 11q","type":"exact"}],"termid":"MONDO:0007838","xrefs":{"Monarch":{"xref_id":"0007838"}}}


id: GO:0005198
data:
  {"annotated_genes":["SJAG_04173","SJAG_00166","SJAG_02757","SJAG_02283","SJAG_02312","SJAG_01721","SJAG_04003","SJAG_01630","SJAG_02890","SJAG_00155","SJAG_00086","SJAG_01478","SJAG_01045","SJAG_02282","SJAG_04281","SJAG_03584","SJAG_03986","SJAG_00782","SJAG_02535","SJAG_04672","SJAG_00465","SJAG_04814","SJAG_04626","SJAG_02020","SJAG_01132","SJAG_02335","SJAG_00336","SJAG_MIT15","SJAG_03192","SJAG_02861","SJAG_00537","SJAG_03300","SJAG_00513","SJAG_01548","SJAG_03053","SJAG_02546","SJAG_02479","SJAG_02870","SJAG_01853","SJAG_06253","SJAG_03284","SJAG_00962","SJAG_03593","SJAG_01013","SJAG_01087","SJAG_03636","SJAG_01296","SJAG_05000","SJAG_02749","SJAG_04216","SJAG_04689","SJAG_03159","SJAG_05243","SJAG_00307","SJAG_04387","SJAG_03043","SJAG_01364","SJAG_01202","SJAG_01508","SJAG_03459","SJAG_02210","SJAG_00471","SJAG_03649","SJAG_02280","SJAG_04753","SJAG_01303","SJAG_04569","SJAG_00335","SJAG_00889","SJAG_02234","SJAG_01463","SJAG_04746","SJAG_03925","SJAG_02046","SJAG_00093","SJAG_04176","SJAG_04395","SJAG_01580","SJAG_03297","SJAG_02762","SJAG_02184","SJAG_03145","SJAG_04847","SJAG_00468","SJAG_02201","SJAG_05320","SJAG_02071","SJAG_02067","SJAG_04002","SJAG_05270","SJAG_00799","SJAG_07009","SJAG_03859","SJAG_01734","SJAG_02274","SJAG_01413","SJAG_02840","SJAG_04168","SJAG_04244","SJAG_00629","SJAG_01767","SJAG_06612","SJAG_00755","SJAG_01520","SJAG_01606","SJAG_02777","SJAG_04378","SJAG_01608","SJAG_05244","SJAG_01065","SJAG_05248","SJAG_00940","SJAG_01411","SJAG_02509","SJAG_02081","SJAG_03299","SJAG_01719","SJAG_00105","SJAG_01632","SJAG_00315","SJAG_02531","SJAG_02340","SJAG_04256","SJAG_03122","SJAG_03941","SJAG_01609","SJAG_04645","SJAG_02682","SJAG_07013","SJAG_01468","SJAG_02597","SJAG_04494","SJAG_03197","SJAG_03065","SJAG_01591","SJAG_00749","SJAG_01194","SJAG_00303","SJAG_02324","SJAG_00220","SJAG_01512","SJAG_04019","SJAG_03729","SJAG_02522","SJAG_02643","SJAG_00726","SJAG_03971","SJAG_04070","SJAG_02424","SJAG_03942","SJAG_04912","SJAG_00765","SJAG_03666","SJAG_01873","SJAG_04148","SJAG_00069","SJAG_02927","SJAG_03762","SJAG_04663","SJAG_06110","SJAG_04017","SJAG_01829","SJAG_00985","SJAG_01384","SJAG_02359","SJAG_03424","SJAG_02871","SJAG_01322","SJAG_03040","SJAG_03542","SJAG_00860","SJAG_03383","SJAG_01226","SJAG_01568","SJAG_00921","SJAG_04893","SJAG_03182","SJAG_01128","SJAG_00034","SJAG_04695","SJAG_02477","SJAG_04204","SJAG_02207","SJAG_03425","SJAG_00844","SJAG_04476","SJAG_00133","SJAG_01374","SJAG_01954","SJAG_04490","SJAG_02803","SJAG_03047","SJAG_00384","SJAG_04897","SJAG_03502","SJAG_03922","SJAG_03335","SJAG_04324","SJAG_01565","SJAG_05573","SJAG_05216","SJAG_01287","SJAG_01588","SJAG_04414","SJAG_03402","SJAG_00497","SJAG_02802","SJAG_04517","SJAG_01834","SJAG_00375","SJAG_00748","SJAG_02755","SJAG_03176","SJAG_02224","SJAG_03568","SJAG_00738","SJAG_04304","SJAG_02611","SJAG_04918","SJAG_03034","SJAG_00503","SJAG_04493","SJAG_01584","SJAG_01365","SJAG_02253","SJAG_03919","SJAG_03127","SJAG_00733","SJAG_03364","SJAG_02585","SJAG_03558","SJAG_04478","SJAG_01473","SJAG_03422","SJAG_02243","SJAG_02891","SJAG_02894","SJAG_02452","SJAG_04122","SJAG_01727","SJAG_04066","SJAG_03254","SJAG_04534","SJAG_04998","SJAG_03907","SJAG_00866","SJAG_02121","SJAG_02904","SJAG_04164","SJAG_03262","SJAG_04174","SJAG_07014","SJAG_04160","SJAG_00544","SJAG_04342","SJAG_02510","SJAG_01676","SJAG_03408","SJAG_01366","SJAG_04889","SJAG_04475","SJAG_05282","SJAG_00523","SJAG_01551","SJAG_04020","SJAG_00302","SJAG_00628","SJAG_03326","SJAG_03423","SJAG_03543","SJAG_04029","SJAG_04188","SJAG_02836","SJAG_01185","SJAG_03133","SJAG_05218","SJAG_04788","SJAG_01387"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58624,61279,61844,65330,66704,66821,67139,68895,70739,71077,71891,72629,72851,74592,90153,92169,93085,101618,107368,107608,114030,115641,117483,118857],"is_not":false,"summary":null,"term":"GO:0005198"},{"annotations":[63606,112424,112381,59356,60246,72945,60854,112425,73608,76493,112380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030527"},{"annotations":[60815,62979,77660,108863,57978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005200"},{"annotations":[72959,72660,61873,73391,75571,76851,79848,80164,76046,115342,78527,74187,93788,70154,75919,74904,77349,80179,95919,70328,72417,75284,69335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017056"},{"annotations":[97246,108025,71990,66819,73832,73241,73406,68429,74293,63401,75688,58618,75776,71986,96874,74272,110894,67580,79619,113245,75623,67149,109931,116683,67642,67919,70123,70971,67221,66817,71459,74561,69428,76102,65417,74132,73491,74500,57503,58863,67692,60835,78090,61840,70967,117718,79101,68126,70948,78838,107671,113230,62255,72221,63352,69469,75505,76528,76317,79664,79934,60347,62363,65247,98975,77562,90837,71738,75478,109638,67603,70953,79450,74810,72391,73767,65974,72675,77447,76382,66510,73635,78226,78043,78340,74563,69803,58732,66579,70128,7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id: PBO:0085140
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id: GO:2000779
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id: FYPO:0008172
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id: PBO:0073552
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