# terms

id: PBO:0065756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pygopus family PHD finger 1","termid":"PBO:0065756"}


id: GO:0003827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(alpha-D-mannosyl)-beta-D-mannosyl-R + UDP-N-acetyl-alpha-D-glucosamine = 3-(2-[N-acetyl-beta-D-glucosaminyl]-alpha-D-mannosyl)-beta-D-mannosyl-R + H+ + UDP.","definition_xrefs":["EC:2.4.1.101","RHEA:11456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-964768","MetaCyc:2.4.1.101-RXN","KEGG_REACTION:R05983"],"synonyms":[{"name":"GNTI activity","type":"related"},{"name":"GnTI","type":"related"},{"name":"N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:3-(alpha-D-mannosyl)-beta-D-mannosyl-glycoprotein 2-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylglucosaminyl:alpha-1,3-D-mannoside-beta-1,2-N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"UDP-N-acetylglucosaminyl:alpha-3-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosylglycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylglucosamine-alpha-1,3-mannosylglycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0003827"}


id: GO:0072241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric distal convoluted tubule cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DCT cell development","termid":"GO:0072140"},{"relation_name":"part_of","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric DCT cell development","synonyms":[{"name":"metanephric distal convoluted tubule cell development","type":"exact"}],"termid":"GO:0072241"}


id: MONDO:1012039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar abiotrophy, non-human animal","termid":"MONDO:1011834"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar abiotrophy, domestic cat","secondary_identifiers":["OMIA:000175-9685"],"termid":"MONDO:1012039","xrefs":{"Monarch":{"xref_id":"1012039"}}}


id: MONDO:1011528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Histiocytosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytosis, non-human animal","termid":"MONDO:1011436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histiocytosis, cattle","secondary_identifiers":["OMIA:000474-9913"],"termid":"MONDO:1011528","xrefs":{"Monarch":{"xref_id":"1011528"}}}


id: MONDO:0014642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any chronic mucocutaneous candidiasis in which the cause of the disease is a mutation in the IL17RC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"candidiasis, familial, 9","secondary_identifiers":["MEDGEN:906897","UMLS:C4225324","OMIM:616445","GARD:16114"],"synonyms":[{"name":"CANDF9","type":"related"},{"name":"IL17RC chronic mucocutaneous candidiasis (disease)","type":"exact"},{"name":"candidiasis, familial, 9","type":"exact"},{"name":"candidiasis, familial, type 9","type":"exact"},{"name":"chronic mucocutaneous candidiasis (disease) caused by mutation in IL17RC","type":"exact"}],"termid":"MONDO:0014642","xrefs":{"Monarch":{"xref_id":"0014642"}}}


id: PBO:0059877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 14","termid":"PBO:0059877"}


id: PBO:0076766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 5","termid":"PBO:0076766"}


id: MONDO:0033043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive spastic ataxia","termid":"MONDO:0017847"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy","secondary_identifiers":["MEDGEN:1382553","OMIM:617560","Orphanet:527497","UMLS:C4479653","DOID:0080252","GARD:17964"],"synonyms":[{"name":"SPAX8","type":"related"},{"name":"spastic ataxia 8","type":"related"},{"name":"spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy","type":"exact"}],"termid":"MONDO:0033043","xrefs":{"Monarch":{"xref_id":"0033043"}}}


id: PBO:0071037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 39","termid":"PBO:0071037"}


id: GO:0033763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-proline + 2-oxoglutarate + O2 = cis-3-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["EC:1.14.11.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"proline 3-hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.11.28-RXN","RHEA:20265"],"synonyms":[{"name":"L-proline,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"},{"name":"P-3-H","type":"related"}],"termid":"GO:0033763"}


id: PBO:0059525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded light strand origin of replication","termid":"PBO:0059525"}


id: PBO:0052070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 14","termid":"PBO:0052070"}


id: PBO:0073659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 transcription regulator family member B","termid":"PBO:0073659"}


id: GO:1903726
data:
  {"annotated_genes":["SJAG_01187","SJAG_03170","SJAG_03940","SJAG_02380","SJAG_00053","SJAG_01906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104172,90202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[111166,115272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[109522,112538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipid metabolic process.","definition_xrefs":["GO_REF:0000058","PMID:10657240","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"negatively_regulates","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01187":null,"SJAG_01906":null,"SJAG_02380":null,"SJAG_03170":null,"SJAG_03940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of phospholipid metabolic process","type":"exact"},{"name":"down regulation of phospholipid metabolism","type":"exact"},{"name":"down-regulation of phospholipid metabolic process","type":"exact"},{"name":"down-regulation of phospholipid metabolism","type":"exact"},{"name":"downregulation of phospholipid metabolic process","type":"exact"},{"name":"downregulation of phospholipid metabolism","type":"exact"},{"name":"inhibition of phospholipid metabolic process","type":"narrow"},{"name":"inhibition of phospholipid metabolism","type":"narrow"},{"name":"negative regulation of phospholipid metabolism","type":"exact"}],"termid":"GO:1903726","terms_by_termid":{"GO:0071072":null,"GO:1902647":null,"GO:2001211":null}}


id: PBO:0038336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occurs_across","termid":"PBO:0038336"}


id: MONDO:1010211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycosis fungoides that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, non-human animal","termid":"MONDO:1010214"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycosis fungoides, non-human animal","secondary_identifiers":["OMIA:001109"],"termid":"MONDO:1010211","xrefs":{"Monarch":{"xref_id":"1010211"}}}


id: PBO:0001433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S7 (predicted)","termid":"PBO:0001433"}


id: PBO:0054569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1971","termid":"PBO:0054569"}


id: GO:1903844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to transforming growth factor beta stimulus.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","GOC:rph","PMID:22269326","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"cellular response to transforming growth factor beta stimulus","termid":"GO:0071560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to transforming growth factor beta stimulus","synonyms":[{"name":"regulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"regulation of cellular response to TGFbeta stimulus","type":"exact"}],"termid":"GO:1903844"}


id: PBO:0085331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol transfer protein (PITP); controlled by the multiple drug resistance regulator Pdr1p; localizes to lipid particles and microsomes; controls levels of various lipids, may regulate lipid synthesis; homologous to Pdr17p; protein abundance increases in response to DNA replication stress","termid":"PBO:0085331"}


id: GO:0033255
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses histone acetyltransferase activity and links histone acetylation to the assembly of transcriptionally silent chromatin. In vitro, the complex acetylates lysine 16 of histone H4 and lysine 14 of histone H3, although the latter may not be relevant in vivo. The complex contains a catalytic subunit and at least two other subunits; in Saccharomyces, the catalytic subunit is Sas2p and additional subunits are Sas4p and Sas5p.","definition_xrefs":["PMID:11731480","PMID:12626510","PMID:15788653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piccolo histone acetyltransferase complex","termid":"GO:0032777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SAS acetyltransferase complex","synonyms":[{"name":"SAS-I complex","type":"exact"}],"termid":"GO:0033255"}


id: PR:O74982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine-induced death protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.04","synonyms":[{"name":"Spom972h-cid2","type":"exact"}],"termid":"PR:O74982"}


id: FYPO:0004372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the mitotic G2 DNA damage checkpoint is decreased. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0072435","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000298","FYPO:0000631","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased response to mitotic G2 DNA damage checkpoint signaling","synonyms":[{"name":"decreased G2 DNA damage checkpoint during mitotic cell cycle","type":"related"},{"name":"decreased mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"reduced response to mitotic G2 DNA damage checkpoint signaling","type":"exact"}],"termid":"FYPO:0004372"}


id: GO:0060802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from an epiblast cell to an extraembryonic ectoderm cell.","definition_xrefs":["PMID:31391456","PMID:14511481","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"epiblast cell-extraembryonic ectoderm cell signaling","termid":"GO:0060802"}


id: GO:0034472
data:
  {"annotated_genes":["SJAG_04824","SJAG_04818","SJAG_01798","SJAG_04527","SJAG_01521","SJAG_02156","SJAG_01191","SJAG_03179","SJAG_00854","SJAG_01176","SJAG_04321","SJAG_00081","SJAG_04153","SJAG_02993","SJAG_04084","SJAG_03257"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103618,115240],"is_not":false,"summary":null,"term":"GO:0034472"},{"annotations":[71017,71382,72186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034473"},{"annotations":[101970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034474"},{"annotations":[72994,71383,72187,71018,75975,76502,88168,77330,73498,74239,74881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034475"},{"annotations":[72188,89768,71384,71019,98743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034476"},{"annotations":[79182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034477"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an snRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA processing","termid":"GO:0016180"},{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01798":null,"SJAG_02156":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03257":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0008150","GO:0016073","GO:0010467"],"is_obsolete":false,"name":"snRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"snRNA 3' end processing","type":"exact"}],"termid":"GO:0034472","terms_by_termid":{"GO:0034472":null,"GO:0034473":null,"GO:0034474":null,"GO:0034475":null,"GO:0034476":null,"GO:0034477":null}}


id: PBO:0028924
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription","termid":"PBO:0028924"}


id: PBO:0036547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase beta subunit Lsc2 (predicted)","termid":"PBO:0036547"}


id: GO:0061287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a mesonephric capsule from unspecified parts. The mesonephric capsule is the tough fibrous layer surrounding the mesonephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule formation","termid":"GO:0072129"},{"relation_name":"part_of","term_name":"mesonephric capsule morphogenesis","termid":"GO:0061286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric capsule formation","termid":"GO:0061287"}


id: GO:0090710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-5-phosphomevalonate + ATP = ADP + CO2 + isopentenyl phosphate + phosphate.","definition_xrefs":["PMID:24375100","RHEA:40955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"phosphomevalonate decarboxylase activity","secondary_identifiers":["EC:4.1.1.99","MetaCyc:RXN-10067"],"termid":"GO:0090710"}


id: GO:0071889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 14-3-3 protein. A 14-3-3 protein is any of a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimers within all eukaryotic cells, and have been implicated in the modulation of distinct biological processes by binding to specific phosphorylated sites on diverse target proteins, thereby forcing conformational changes or influencing interactions between their targets and other molecules. Each 14-3-3 protein sequence can be roughly divided into three sections: a divergent amino terminus, the conserved core region and a divergent carboxy-terminus. The conserved middle core region of the 14-3-3s encodes an amphipathic groove that forms the main functional domain, a cradle for interacting with client proteins.","definition_xrefs":["GOC:mah","PMID:15167810","GOC:cna","PMID:19575580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"14-3-3 protein binding","termid":"GO:0071889"}


id: PBO:0003746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L35 (predicted)","termid":"PBO:0003746"}


id: PBO:0064205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLAG1 like zinc finger 1","termid":"PBO:0064205"}


id: GO:0097211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gonadotropin-releasing hormone stimulus. Gonadotropin-releasing hormone (GnRH) is a peptide hormone responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary. GnRH is synthesized and released by the hypothalamus.","definition_xrefs":["PMID:15976007","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to gonadotropin-releasing hormone","termid":"GO:0097210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gonadotropin-releasing hormone","synonyms":[{"name":"cellular response to GnRH","type":"exact"},{"name":"cellular response to gonadotrophin-releasing hormone","type":"exact"}],"termid":"GO:0097211"}


id: PBO:0005740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Ppe1","termid":"PBO:0005740"}


id: GO:0046862
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a chromoplast and form the chromoplast envelope.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"chromoplast envelope","termid":"GO:0031898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chromoplast membrane","termid":"GO:0046862"}


id: GO:0031036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament assembly","termid":"GO:0031034"},{"relation_name":"is_a","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0030036","GO:0007010","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"myosin II filament assembly","synonyms":[{"name":"myosin II polymerization","type":"related"}],"termid":"GO:0031036"}


id: PBO:0083134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual specificity protein phosphatase; dephosphorylates T1 and S5 in  C-terminal domain (CTD) of RNA polymerase II largest subunit, Rpo21p; autoregulates turnover of its mRNA; has a cysteine-rich motif required for function and conserved in eukaryotes; shuttles between the nucleus and cytoplasm; RTR1 has a paralog, RTR2, that arose from the whole genome duplication","termid":"PBO:0083134"}


id: MONDO:1010087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatomyositis characterized by the presence of anti-TIF1 autoantibodies.","definition_xrefs":["PMID:31279808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005336"],"is_obsolete":false,"name":"anti-TIF1 dermatomyositis","synonyms":[{"name":"anti-transcription intermediary factor 1 complex dermatomyositis","type":"exact"}],"termid":"MONDO:1010087","xrefs":{"Monarch":{"xref_id":"1010087"}}}


id: PBO:0069087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 334, pseudogene","termid":"PBO:0069087"}


id: PBO:0030038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_minichromosome_loss","termid":"PBO:0030038"}


id: PBO:0058483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5590","termid":"PBO:0058483"}


id: FYPO:0006209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to copper ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to copper ion starvation","termid":"FYPO:0006208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion starvation","type":"related"},{"name":"decreased RNA level during cellular response to copper starvation","type":"exact"},{"name":"decreased transcript level during cellular response to copper ion starvation","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion starvation","type":"exact"}],"termid":"FYPO:0006209"}


id: PBO:0077058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THSD4 antisense RNA 1","termid":"PBO:0077058"}


id: PBO:0069551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 822, pseudogene","termid":"PBO:0069551"}


id: GO:0043385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a mycotoxin, any poisonous substance produced by a fungus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"mycotoxin metabolic process","synonyms":[{"name":"mycotoxin metabolism","type":"exact"}],"termid":"GO:0043385"}


id: PBO:0053313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA, regulator of reprogramming","termid":"PBO:0053313"}


id: PR:Q9UUD0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19C2.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUD0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19C2.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.10","synonyms":[{"name":"Spom972h-SPBC19C2.10","type":"exact"}],"termid":"PR:Q9UUD0"}


id: MONDO:0018076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, recurrent infection caused by the bacterium Mycobacterium tuberculosis. Tuberculosis (TB) may affect almost any tissue or organ of the body with the lungs being the most common site of infection. The clinical stages of TB are primary or initial infection, latent or dormant infection, and recrudescent or adult-type TB. Ninety to 95% of primary TB infections may go unrecognized. Histopathologically, tissue lesions consist of granulomas which usually undergo central caseation necrosis. Local symptoms of TB vary according to the part affected; acute symptoms include hectic fever, sweats, and emaciation; serious complications include granulomatous erosion of pulmonary bronchi associated with hemoptysis. If untreated, progressive TB may be associated with a high degree of mortality. This infection is frequently observed in immunocompromised individuals with AIDS or a history of illicit IV drug use.","definition_xrefs":["NCIT:C3423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"mycobacterial infectious disease","termid":"MONDO:0020590"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculosis","secondary_identifiers":["GARD:7827","MEDGEN:22513","ICD10CM:A15-A19","ICD9:017.94","DOID:399","icd11.foundation:2072728114","NORD:1801","SCTID:56717001","MESH:D014376","UMLS:C0041296","Orphanet:3389","ICD9:017.92","ICD9:017.90","ICD9:017.96","MedDRA:10044755"],"synonyms":[{"name":"Kochs disease","type":"related"},{"name":"TB","type":"related"},{"name":"active tuberculosis","type":"narrow"},{"name":"tuberculosis disease","type":"exact"}],"termid":"MONDO:0018076","xrefs":{"Monarch":{"xref_id":"0018076"}}}


id: MONDO:1012585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar ataxia that occurs dogs due to a mutation in the GRM1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal cerebellar ataxia, GRM1-related, dog","secondary_identifiers":["OMIA:000078-9615"],"synonyms":[{"name":"Bandera's neonatal ataxia, dog","type":"related"},{"name":"ataxia, cerebellar, neonatal, GRM1-related, dog","type":"related"}],"termid":"MONDO:1012585","xrefs":{"Monarch":{"xref_id":"1012585"}}}


id: GO:0042941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-alanine, the D-enantiomer of 2-aminopropanoic acid,  is transported across a lipid bilayer, from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","GOC:mah","GOC:jsg","GO:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"alanine transport","termid":"GO:0032328"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"D-alanine transmembrane transport","termid":"GO:0042941"}


id: GO:0031615
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subcomplex of the cytosolic proteasome regulatory particle that forms the peripheral lid, which is added on top of the base subcomplex.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle, lid subcomplex","termid":"GO:0008541"},{"relation_name":"part_of","term_name":"cytosolic proteasome regulatory particle","termid":"GO:0031600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cytosolic proteasome regulatory particle, lid subcomplex","termid":"GO:0031615"}


id: SO:1000026
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from guanine to cytidine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_to_pyrimidine_transversion","termid":"SO:1000023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G_to_C_transversion","synonyms":[{"name":"G to C transversion","type":"exact"}],"termid":"SO:1000026"}


id: MONDO:0018405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of rare male infertility due to hypothalamic-pituitary-gonadal axis disorder that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete rare male infertility due to hypothalamic-pituitary-gonadal axis disorder of genetic origin (obsolete MONDO:0018405)","secondary_identifiers":["Orphanet:399983"],"synonyms":[{"name":"genetic rare male infertility due to hypothalamic-pituitary-gonadal axis disorder","type":"exact"},{"name":"rare male infertility due to gonadotropic axis disorder of genetic origin","type":"exact"},{"name":"rare male infertility due to hypothalamic-pituitary-testicular axis disorder of genetic origin","type":"exact"}],"termid":"MONDO:0018405","xrefs":{"Monarch":{"xref_id":"0018405"}}}


id: GO:0005692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U11, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U11 snRNP, most of which remain associated with the U11 snRNA both while the U11 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["ISBN:0879695897","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U11 snRNP","synonyms":[{"name":"12S U11 snRNP","type":"narrow"},{"name":"snRNP U11","type":"exact"}],"termid":"GO:0005692"}


id: PBO:0030118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_zinc_ion","termid":"PBO:0030118"}


id: MONDO:0100540
data:
  {"annotated_genes":["SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013770"},{"annotations":[86453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013769"}]},"cv_name":"mondo","definition":"A congenital heart disease that is present at birth. Representative examples include atrial septal defect 9, conotruncal heart malformations, tetralogy of Fallot, ventricular septal defect, atrioventricular septal defect, bicuspid aortic valve, transposition of the great arteries, persistent truncus arteriosus, congenital heart disease with pancreatic agenesis, and congenital heart disease with neonatal diabetes.","definition_xrefs":["PMID:25937001","PMID:31301121","PMID:19666519","PMID:23020118","PMID:35595280","PMID:28049534","PMID:29653232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02730":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"GATA6-related congenital heart disease with or without pancreatic agenesis or neonatal diabetes","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"GATA6 related congenital heart disease with or without pancreatic agenesis or neonatal diabetes","type":"exact"}],"termid":"MONDO:0100540","terms_by_termid":{"MONDO:0013769":null,"MONDO:0013770":null},"xrefs":{"Monarch":{"xref_id":"0100540"}}}


id: FYPO:0005115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated and has an abnormal shape featuring a constriction at the center of the cell, corresponding to the cell division site. In some such cells, the diameter at the ends is much greater than in wild-type cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"elongated vegetative cell with central constriction","synonyms":[{"name":"cell morphology, elongated dumbbell","type":"related"},{"name":"cell morphology, long dumbbell","type":"related"},{"name":"elongated cell with central constriction during mitotic cell cycle","type":"related"},{"name":"elongated cell with central constriction during vegetative growth","type":"exact"},{"name":"elongated dumbbell morphology","type":"related"},{"name":"elongated dumbbell-shaped vegetative cell","type":"related"},{"name":"elongated swollen vegetative cell with constricted region at cell division site","type":"exact"}],"termid":"FYPO:0005115"}


id: GO:0061327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior Malpighian tubule over time, from its formation to the mature structure. The pair of anterior tubules arise from a dorsal region of the embryonic hindgut and projects forwards through the body cavity. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which connects with the posterior part of the gut.","definition_xrefs":["GOC:dph","PMID:19783135","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior Malpighian tubule development","termid":"GO:0061327"}


id: FYPO:0008111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which snRNA modification is abnormal. All snRNA modification may be abnormal, or one or more specific snRNA modifications may be selectively affected.","definition_xrefs":["PMID:37403782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal snRNA modification","termid":"FYPO:0008111"}


id: PBO:0113362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that acts as sensor of stalled ribosomes; binds to Fpr1p and Smu2p, and triggers ubiquitination of stalled monosomes for subsequent degradation; confers rapamycin resistance by competing with rapamycin for Fpr1p binding; accumulates in the nucleus upon treatment of cells with rapamycin; has similarity to D. melanogaster shuttle craft and human NFX1","termid":"PBO:0113362"}


id: PBO:0029459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_morphology","termid":"PBO:0029459"}


id: MONDO:1011679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary pancreatitis, non-human animal","secondary_identifiers":["OMIA:001403"],"termid":"MONDO:1011679","xrefs":{"Monarch":{"xref_id":"1011679"}}}


id: MONDO:0008835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma, short stature, and elevated IgA","secondary_identifiers":["UMLS:C1859647","MEDGEN:395313","OMIM:208600","MESH:C565934"],"synonyms":[{"name":"asthma, short stature, and elevated IgA","type":"exact"}],"termid":"MONDO:0008835","xrefs":{"Monarch":{"xref_id":"0008835"}}}


id: GO:1902406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular process in which the mitotic contractile ring cytokinetic ring attains its fully functional state.","definition_xrefs":["PMID:25451933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring maturation","termid":"GO:0031566"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0000281","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring maturation","synonyms":[{"name":"mitotic cytokinesis contractile ring maintenance","type":"related"}],"termid":"GO:1902406"}


id: PBO:0091627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA","termid":"PBO:0091627"}


id: MONDO:1012516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"goldenhar syndrome, non-human animal","termid":"MONDO:1011657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goldenhar syndrome, domestic cat","secondary_identifiers":["OMIA:002136-9685"],"termid":"MONDO:1012516","xrefs":{"Monarch":{"xref_id":"1012516"}}}


id: PBO:0040495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A and ninein interacting protein","termid":"PBO:0040495"}


id: PBO:0071791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p30","termid":"PBO:0071791"}


id: PBO:0089567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GEF Sec2","termid":"PBO:0089567"}


id: PBO:0036076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_mitosis","termid":"PBO:0036076"}


id: MONDO:0014085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital hydrocephalus in which the cause of the disease is a mutation in the MPDZ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"hydrocephalus, nonsyndromic, autosomal recessive 2","secondary_identifiers":["UMLS:C3554691","MEDGEN:767605","OMIM:615219"],"synonyms":[{"name":"HYC2","type":"related"},{"name":"MPDZ congenital hydrocephalus","type":"exact"},{"name":"congenital hydrocephalus caused by mutation in MPDZ","type":"exact"},{"name":"hydrocephalus, congenital, 2, with or without brain or eye anomalies","type":"exact"},{"name":"hydrocephalus, nonsyndromic, autosomal recessive 2","type":"exact"},{"name":"hydrocephalus, nonsyndromic, autosomal recessive type 2","type":"exact"}],"termid":"MONDO:0014085","xrefs":{"Monarch":{"xref_id":"0014085"}}}


id: PBO:0088554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidic acid transfer protein Ups2","termid":"PBO:0088554"}


id: GO:1902461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal stem cell proliferation.","definition_xrefs":["PMID:18672106","GOC:TermGenie","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell proliferation","termid":"GO:1902460"},{"relation_name":"is_a","term_name":"negative regulation of stem cell proliferation","termid":"GO:2000647"},{"relation_name":"negatively_regulates","term_name":"mesenchymal stem cell proliferation","termid":"GO:0097168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal stem cell proliferation","synonyms":[{"name":"down regulation of MSC proliferation","type":"exact"},{"name":"down regulation of mesenchymal stem cell proliferation","type":"exact"},{"name":"down-regulation of MSC proliferation","type":"exact"},{"name":"down-regulation of mesenchymal stem cell proliferation","type":"exact"},{"name":"downregulation of MSC proliferation","type":"exact"},{"name":"downregulation of mesenchymal stem cell proliferation","type":"exact"},{"name":"inhibition of MSC proliferation","type":"narrow"},{"name":"inhibition of mesenchymal stem cell proliferation","type":"narrow"},{"name":"negative regulation of MSC proliferation","type":"exact"}],"termid":"GO:1902461"}


id: PBO:0001161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA lariat debranching enzyme Dbr1","termid":"PBO:0001161"}


id: PR:O74853
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional repressor NF-X1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12360:SF0","OMA:SCHPO04882","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP12-associated protein 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.03","secondary_identifiers":["UniProtKB:O74853"],"synonyms":[{"name":"Spom972h-NFX1","type":"exact"}],"termid":"PR:O74853"}


id: GO:0034524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxyisophthalic acid = salicylate + CO2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxyisophthalate decarboxylase activity (obsolete GO:0034524)","termid":"GO:0034524"}


id: FYPO:0000403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the duration of progression through the G2/M transition of the mitotic cell cycle is increased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased duration of mitotic G2/M phase transition (obsolete FYPO:0000403)","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: increased duration","type":"related"},{"name":"increased duration of cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"increased duration of mitotic G2/M phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000403"}


id: SO:0000921
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a dinucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000921 insert_dinucleotide (obsolete SO:0000921)","synonyms":[{"name":"insert dinucleotide","type":"exact"}],"termid":"SO:0000921"}


id: GO:0106336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the yolk syncytial layer over time, from its initial formation to the mature structure. The yolk syncytial layer is the peripheral layer of the yolk cell including nuclei and non-yolky cytoplasm.","definition_xrefs":["PMID:29180571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"yolk syncytial layer development","synonyms":[{"name":"YSL development","type":"related"}],"termid":"GO:0106336"}


id: MONDO:0027676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital anomaly of kidney and urinary tract in which the cause of the disease is a mutation in the TBX18 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of kidney and urinary tract","termid":"MONDO:0019719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital anomalies of kidney and urinary tract 2","secondary_identifiers":["MEDGEN:1804316","UMLS:C5574705","DOID:0080207","OMIM:143400"],"synonyms":[{"name":"CAKUT2","type":"related"},{"name":"TBX18 congenital anomaly of kidney and urinary tract","type":"exact"},{"name":"congenital anomalies of kidney and urinary tract 2","type":"exact"},{"name":"congenital anomalies of kidney and urinary tract type 2","type":"exact"},{"name":"congenital anomaly of kidney and urinary tract caused by mutation in TBX18","type":"exact"},{"name":"hydronephrosis due to Pujo","type":"related"},{"name":"multicystic renal dysplasia, bilateral","type":"related"},{"name":"pelviureteric junction obstruction","type":"related"},{"name":"ureteropelvic junction obstruction","type":"related"}],"termid":"MONDO:0027676","xrefs":{"Monarch":{"xref_id":"0027676"}}}


id: MONDO:0000219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uncombable hair syndrome (obsolete MONDO:0000219)","termid":"MONDO:0000219","xrefs":{"Monarch":{"xref_id":"0000219"}}}


id: MONDO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Alpers syndrome (obsolete MONDO:0001960)","termid":"MONDO:0001960","xrefs":{"Monarch":{"xref_id":"0001960"}}}


id: PBO:0082387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 7 subunit of the 20S proteasome","termid":"PBO:0082387"}


id: PBO:0070729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10","termid":"PBO:0070729"}


id: PR:Q9HDU0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDU0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein PB2B2.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.17c","synonyms":[{"name":"Spom972h-SPBPB2B2.17c","type":"exact"}],"termid":"PR:Q9HDU0"}


id: FYPO:0001391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum closer to the new end of the cell (when the new end is not yet growing), instead of at the midpoint of the long axis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"monoseptate","termid":"FYPO:0001225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000138","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"mislocalized septum, near new end","synonyms":[{"name":"abnormal septum location, near new end","type":"exact"},{"name":"abnormal septum location, near non-growing end","type":"narrow"},{"name":"abnormal septum position, near new end","type":"exact"},{"name":"abnormal septum position, near non-growing end","type":"narrow"},{"name":"asymmetric septum, near new end","type":"exact"},{"name":"asymmetric septum, near non-growing end","type":"narrow"},{"name":"asymmetrically located septum, near new end","type":"exact"},{"name":"asymmetrically located septum, near non-growing end","type":"narrow"},{"name":"mislocalised septum, near new end","type":"exact"},{"name":"mislocalised septum, near non-growing end","type":"narrow"},{"name":"mislocalized septum, near new end during mitotic cell cycle","type":"related"},{"name":"mislocalized septum, near new end, during vegetative growth","type":"exact"},{"name":"mislocalized septum, near non-growing end","type":"narrow"},{"name":"mislocalized septum, near non-growing end, during vegetative growth","type":"narrow"},{"name":"misplaced septum, near new end","type":"exact"}],"termid":"FYPO:0001391"}


id: PR:Q9UTK6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tuftelin-interacting protein 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01334","PANTHER:PTHR23329:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain-containing protein C1486.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.03c","secondary_identifiers":["UniProtKB:Q9UTK6"],"synonyms":[{"name":"Spom972h-TFIP11","type":"exact"}],"termid":"PR:Q9UTK6"}


id: GO:0004518
data:
  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of the hydrolysis of ester linkages within nucleic acids.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester 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id: PBO:0001361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Mpp1 (predicted)","termid":"PBO:0001361"}


id: PBO:0110233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral nuclear inner membrane protein Bqt4","termid":"PBO:0110233"}


id: GO:0009184
data:
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id: PBO:0006180
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id: PBO:0045917
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id: GO:0002012
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id: PBO:0030266
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id: MONDO:0005267
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id: MONDO:0015574
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic cutaneous lupus erythematosus (CCLE) is a form of cutaneous lupus erythematosus (CLE) that includes five different forms: discoid lupus erythematosus (DLE), chilblain lupus, hypertrophic or verrucous lupus erythematosus, lupus erythematosus tumidus, and lupus erythematosus panniculitis.","definition_xrefs":["Orphanet:163531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous lupus erythematosus","termid":"MONDO:0005282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"chronic cutaneous lupus erythematosus","secondary_identifiers":["MedDRA:10057929","icd11.foundation:1849568465","GARD:20043"],"synonyms":[{"name":"cutaneous lupus erythematosus, chronic","type":"exact"}],"termid":"MONDO:0015574","xrefs":{"Monarch":{"xref_id":"0015574"}}}


id: PBO:0068157
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 464","termid":"PBO:0068157"}


id: MONDO:0003906
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the ovary and is characterized by the presence of extensive differentiation into hepatic tissue.","definition_xrefs":["NCIT:C39989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian yolk sac tumor","termid":"MONDO:0006344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian yolk sac tumor, hepatoid pattern","secondary_identifiers":["MEDGEN:276676","DOID:6512","UMLS:C1518748"],"synonyms":[{"name":"hepatoid pattern ovarian yolk sac tumor","type":"related"},{"name":"hepatoid pattern ovarian yolk sac tumour","type":"related"},{"name":"ovarian yolk Sac tumor, hepatoid pattern","type":"exact"}],"termid":"MONDO:0003906","xrefs":{"Monarch":{"xref_id":"0003906"}}}


id: MONDO:0011442
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any advanced sleep phase syndrome in which the cause of the disease is a mutation in the PER2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"advanced sleep phase syndrome","termid":"MONDO:0015609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"advanced sleep phase syndrome 1","secondary_identifiers":["MEDGEN:813657","GARD:15368","UMLS:C3807327","OMIM:604348","DOID:0110011"],"synonyms":[{"name":"FASPS1","type":"exact"},{"name":"PER2 advanced sleep phase syndrome","type":"exact"},{"name":"advanced sleep phase syndrome caused by mutation in PER2","type":"exact"},{"name":"advanced sleep phase syndrome type 1","type":"exact"},{"name":"advanced sleep phase syndrome, familial, 1","type":"related"},{"name":"advanced sleep phase syndrome, familial, type 1","type":"exact"},{"name":"familial advanced sleep phase syndrome 1","type":"exact"}],"termid":"MONDO:0011442","xrefs":{"Monarch":{"xref_id":"0011442"}}}


id: GO:0086094
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adrenergic receptor signaling pathway that contributes to an increase in frequency or rate of cardiac muscle contraction through phosphorylation and enhancement of the ryanodine receptor, a calcium-activated calcium-release channel found in the membrane of the sarcoplasmic reticulum. An adrenergic receptor-activated adenylate cyclase generates cAMP. cAMP then activates the cAMP-dependent protein kinase A (PKA), which phosphorylates the ryanodine receptor (RyR). PKA-phosphorylation of RyR enhances channel activity by sensitizing the channel to cytosolic calcium. Cytosolic calcium stimulates contractile proteins to promote muscle contraction.","definition_xrefs":["PMID:21099118","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ryanodine-sensitive calcium-release channel activity by adrenergic receptor signaling pathway involved in positive regulation of cardiac muscle contraction (obsolete GO:0086094)","synonyms":[{"name":"adrenergic receptor signaling pathway involved in positive regulation of cardiac muscle contraction via ryanodine receptor phosphorylation","type":"narrow"}],"termid":"GO:0086094"}


id: GO:0006277
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id: PBO:0029958
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id: MONDO:0016978
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id: GO:0090481
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id: MONDO:0003632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the endocervix.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervicitis","termid":"MONDO:0002345"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocervicitis","secondary_identifiers":["NCIT:C26762","MEDGEN:4942","DOID:5757","SCTID:31354001","icd11.foundation:803236221","UMLS:C0014127"],"synonyms":[{"name":"endocervix inflammation","type":"exact"},{"name":"inflammation of endocervix","type":"exact"}],"termid":"MONDO:0003632","xrefs":{"Monarch":{"xref_id":"0003632"}}}


id: MONDO:0012094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 4","secondary_identifiers":["UMLS:C1837593","GARD:15440","MEDGEN:325204","MESH:C563882","OMIM:608658"],"synonyms":[{"name":"HPC4","type":"related"},{"name":"prostate cancer, hereditary, 4","type":"exact"},{"name":"prostate cancer, hereditary, on chromosome 7","type":"related"},{"name":"prostate cancer, hereditary, type 4","type":"exact"},{"name":"prostate cancer, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0012094","xrefs":{"Monarch":{"xref_id":"0012094"}}}


id: GO:2000825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of androgen receptor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"positive regulation of DNA-binding transcription factor activity","termid":"GO:0051091"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0010467","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"positive regulation of androgen receptor activity","termid":"GO:2000825"}


id: PBO:0000550
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.16.5","termid":"PBO:0000550"}


id: SO:0001554
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which changes polypeptide functioning with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_function_variant","synonyms":[{"name":"polypeptide function variant","type":"exact"}],"termid":"SO:0001554"}


id: GO:2001186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD8-positive, alpha-beta T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001185"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta T cell activation","termid":"GO:0036037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001186"}


id: GO:0070797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cleistothecium development, a process that leads to the formation of a cleistothecium. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cleistothecium development","termid":"GO:0070796"},{"relation_name":"is_a","term_name":"negative regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902059"},{"relation_name":"negatively_regulates","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cleistothecium development","termid":"GO:0070797"}


id: PBO:0011968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy C terminal domain family protein Atg10 (predicted)","termid":"PBO:0011968"}


id: PBO:0055024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2439","termid":"PBO:0055024"}


id: FYPO:0005813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or both ends of a microtubule is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to microtubule cytoskeleton during mitotic interphase","termid":"FYPO:0003185"},{"relation_name":"is_a","term_name":"normal intracellular protein transport during vegetative growth","termid":"FYPO:0005397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to microtubule end during mitotic interphase","synonyms":[{"name":"normal protein localisation to microtubule end during mitotic interphase","type":"exact"},{"name":"normal protein localization to microtubule end during interphase during vegetative growth","type":"exact"},{"name":"normal protein localization to microtubule end during interphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005813"}


id: PBO:0086004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YOR062C has a paralog, YKR075C, that arose from the whole genome duplication","termid":"PBO:0086004"}


id: GO:0006855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a xenobiotic, a compound foreign to the organism exposed to it, is transported across a membrane. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:bf","GOC:krc","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transport","termid":"GO:0042908"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"xenobiotic transmembrane transport","synonyms":[{"name":"drug membrane transport","type":"exact"},{"name":"drug transmembrane transport","type":"related"},{"name":"multidrug transport","type":"related"}],"termid":"GO:0006855"}


id: MONDO:0958023
data:
  {"annotated_genes":["SJAG_00946"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85911],"is_not":false,"summary":null,"term":"MONDO:0958023"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital generalized lipodystrophy","termid":"MONDO:0006536"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"lipodystrophy, congenital generalized, type 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882745","MEDGEN:1847991","OMIM:620680"],"termid":"MONDO:0958023","terms_by_termid":{"MONDO:0958023":null},"xrefs":{"Monarch":{"xref_id":"0958023"}}}


id: GO:0006170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dAMP, deoxyadenosine monophosphate (2'-deoxyadenosine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"dAMP metabolic process","termid":"GO:0046053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dAMP biosynthetic process","synonyms":[{"name":"dAMP anabolism","type":"exact"},{"name":"dAMP biosynthesis","type":"exact"},{"name":"dAMP formation","type":"exact"},{"name":"dAMP synthesis","type":"exact"}],"termid":"GO:0006170"}


id: FYPO:0004553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to ionizing radiation during mitotic S phase. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to ionizing radiation during mitotic S phase (obsolete FYPO:0004553)","synonyms":[{"name":"cut during cellular response to IR during mitotic S phase","type":"exact"},{"name":"cut during cellular response to ionizing radiation during S phase of mitotic cell cycle","type":"related"},{"name":"cut during cellular response to ionizing radiation during mitotic S phase during vegetative growth","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to ionizing radiation during mitotic S phase","type":"exact"}],"termid":"FYPO:0004553"}


id: MONDO:0035312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of inflammatory pseudotumor of the liver characterized by a benign, well-circumscribed tumor with fibrohistiocytic infiltration (including xanthogranulomatous inflammation, multinucleated giant cells, and neutrophilic infiltration), typically localized in the peripheral hepatic parenchyma. Presentation may be of non-specific symptoms (fever, malaise, and abdominal pain) or as an incidental finding.","definition_xrefs":["Orphanet:555434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"fibrohistiocytic inflammatory pseudotumor of the liver","secondary_identifiers":["MEDGEN:1843230","ICD10CM:K75.8","UMLS:C5681328","GARD:22239"],"termid":"MONDO:0035312","xrefs":{"Monarch":{"xref_id":"0035312"}}}


id: GO:0098036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites to produce 3' protruding ends.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome packaging via site-specific sequence recognition","termid":"GO:0098035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral DNA genome packaging, 3' extended cos packaging","termid":"GO:0098036"}


id: GO:0048871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state at the level of the multicellular organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"homeostatic process","termid":"GO:0042592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}


id: PBO:0068664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 45, pseudogene","termid":"PBO:0068664"}


id: GO:0031884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 member 1 taste receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor binding","termid":"GO:0031883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 1 member 1 taste receptor binding","synonyms":[{"name":"type 1 member 1 taste receptor ligand","type":"narrow"}],"termid":"GO:0031884"}


id: GO:1905705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a paclitaxel stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:18472094"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to paclitaxel (obsolete GO:1905705)","termid":"GO:1905705"}


id: MONDO:0007514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated ectopia lentis in which the cause of the disease is a mutation in the FBN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"isolated ectopia lentis","termid":"MONDO:0015998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ectopia lentis 1, isolated, autosomal dominant","secondary_identifiers":["DOID:0111150","UMLS:C3541518","OMIM:129600","MEDGEN:762106","GARD:15062"],"synonyms":[{"name":"ECTOL1","type":"exact"},{"name":"FBN1 isolated ectopia lentis","type":"exact"},{"name":"autosomal dominant isolated ectopia lentis 1","type":"related"},{"name":"ectopia lentis 1, isolated, autosomal dominant","type":"exact"},{"name":"ectopia lentis, familial","type":"exact"},{"name":"isolated ectopia lentis caused by mutation in FBN1","type":"exact"}],"termid":"MONDO:0007514","xrefs":{"Monarch":{"xref_id":"0007514"}}}


id: PBO:0039512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30B like","termid":"PBO:0039512"}


id: PBO:0055664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINGO1 antisense RNA 1","termid":"PBO:0055664"}


id: MONDO:1012474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal degeneration that occurs in the Smoky Joe breed of chicken.","definition_xrefs":["OMIA:001869-9031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal degeneration, Smoky Joe, chicken","termid":"MONDO:1012474","xrefs":{"Monarch":{"xref_id":"1012474"}}}


id: GO:0061751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sphingomyelin = ceramide + choline phosphate + H+ in a neutral environment.","definition_xrefs":["GOC:dph","PMID:26493087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingomyelin phosphodiesterase activity","termid":"GO:0004767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"neutral sphingomyelin phosphodiesterase activity","synonyms":[{"name":"neutral SMase","type":"exact"},{"name":"neutral sphingomyelinase","type":"exact"}],"termid":"GO:0061751"}


id: PBO:0011079
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ABD1","termid":"PBO:0011079"}


id: PBO:0041901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBARP divergent transcript","termid":"PBO:0041901"}


id: PBO:0003522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxalyl-CoA decarboxylase (predicted)","termid":"PBO:0003522"}


id: MONDO:0002192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon benign lesion in the vulva. It manifests with multiple papular lesions which are purple in color. They are usually asymptomatic. Histologically, there is hyperkeratosis, papillomatosis, and dilated blood vessels in the papillary dermis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar benign neoplasm","termid":"MONDO:0000643"},{"relation_name":"is_a","term_name":"angiokeratoma of Fordyce","termid":"MONDO:0003954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"vulvar angiokeratoma","secondary_identifiers":["DOID:2066","MEDGEN:266144","UMLS:C1274281","SCTID:402841001","NCIT:C8596"],"synonyms":[{"name":"angiokeratoma of Fordyce of mammalian vulva","type":"related"},{"name":"angiokeratoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva angiokeratoma","type":"exact"},{"name":"mammalian vulva angiokeratoma of Fordyce","type":"exact"}],"termid":"MONDO:0002192","xrefs":{"Monarch":{"xref_id":"0002192"}}}


id: PBO:0079188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 17, pseudogene","termid":"PBO:0079188"}


id: GO:0018729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + propanoate = acetate + propanoyl-CoA.","definition_xrefs":["EC:2.8.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"propionate CoA-transferase activity","secondary_identifiers":["MetaCyc:PROPIONATE-COA-TRANSFERASE-RXN","RHEA:23520","UM-BBD_reactionID:r0087"],"synonyms":[{"name":"acetyl-CoA:propanoate CoA-transferase activity","type":"related"},{"name":"propionate coenzyme A-transferase activity","type":"related"},{"name":"propionate-CoA:lactoyl-CoA transferase activity","type":"related"},{"name":"propionyl CoA:acetate CoA transferase activity","type":"related"},{"name":"propionyl-CoA transferase activity","type":"related"}],"termid":"GO:0018729"}


id: PBO:0036393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein; involved in phospholipid metabolism Ups2 (predicted)","termid":"PBO:0036393"}


id: PBO:0054932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2346","termid":"PBO:0054932"}


id: PR:P38938
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cek1 gene.","definition_xrefs":["UniProtKB:P38938","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase cek1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.11c","synonyms":[{"name":"Spom972h-cek1","type":"exact"}],"termid":"PR:P38938"}


id: PBO:0074462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 4 pseudogene 2","termid":"PBO:0074462"}


id: MONDO:0003391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An alveolar soft part sarcoma arising from the vulva.","definition_xrefs":["NCIT:C40320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulva sarcoma","termid":"MONDO:0005214"},{"relation_name":"is_a","term_name":"alveolar soft part sarcoma","termid":"MONDO:0011655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar alveolar soft part sarcoma","secondary_identifiers":["DOID:5313","MEDGEN:276988","UMLS:C1520069"],"termid":"MONDO:0003391","xrefs":{"Monarch":{"xref_id":"0003391"}}}


id: PBO:0052299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH RNA binding domain containing, signal transduction associated 3","termid":"PBO:0052299"}


id: GO:0043996
data:
  {"annotated_genes":["SJAG_00676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88219],"is_not":false,"summary":null,"term":"GO:0043996"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 8) = CoA + histone H4 N6-acetyl-L-lysine (position 8).","definition_xrefs":["PMID:18552846","PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 acetyltransferase activity","termid":"GO:0010485"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0003824","GO:0016740","GO:0034212","GO:0003674"],"is_obsolete":false,"name":"histone H4K8 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone acetylase activity (H4-K8 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H4-K8 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H4-K8 specific)","type":"exact"}],"termid":"GO:0043996","terms_by_termid":{"GO:0043996":null}}


id: PBO:0053759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1001","termid":"PBO:0053759"}


id: GO:0030315
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane.","definition_xrefs":["GOC:mtg_muscle","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcolemma","termid":"GO:0042383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"T-tubule","secondary_identifiers":["Wikipedia:T-tubule"],"synonyms":[{"name":"transverse tubule","type":"exact"},{"name":"triad","type":"related"}],"termid":"GO:0030315"}


id: MONDO:0001691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the laryngeal cartilage.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"laryngeal cartilage cancer","secondary_identifiers":["SCTID:363431006","ICD9:161.3","UMLS:C0153486","DOID:13348","MEDGEN:509306"],"synonyms":[{"name":"cancer of laryngeal cartilage","type":"exact"},{"name":"laryngeal cartilage cancer","type":"exact"},{"name":"malignant laryngeal cartilage neoplasm","type":"exact"},{"name":"malignant neoplasm of laryngeal cartilage","type":"exact"},{"name":"malignant neoplasm of laryngeal cartilages","type":"exact"},{"name":"malignant tumor of laryngeal cartilage","type":"exact"},{"name":"malignant tumour of laryngeal cartilage","type":"exact"}],"termid":"MONDO:0001691","xrefs":{"Monarch":{"xref_id":"0001691"}}}


id: PBO:0064047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 81","termid":"PBO:0064047"}


id: PBO:0041771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPN10 divergent transcript","termid":"PBO:0041771"}


id: PBO:0038526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 8","termid":"PBO:0038526"}


id: MONDO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the pancreas with the bulk of the tumor localized to this organ. The vast majority of cases are non-Hodgkin lymphomas of B-cell phenotype and include mucosa-associated lymphoid tissue lymphomas, follicular lymphomas, and diffuse large B-cell lymphomas.","definition_xrefs":["NCIT:C5714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal lymphoma","termid":"MONDO:0004699"},{"relation_name":"is_a","term_name":"malignant pancreatic neoplasm","termid":"MONDO:0009831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0005570"],"is_obsolete":false,"name":"pancreas lymphoma","secondary_identifiers":["MEDGEN:233304","UMLS:C1335307","DOID:1792"],"synonyms":[{"name":"lymphoma of pancreas","type":"exact"},{"name":"lymphoma of the pancreas","type":"exact"},{"name":"pancreas lymphoma","type":"exact"},{"name":"pancreatic lymphoma","type":"exact"}],"termid":"MONDO:0002114","xrefs":{"Monarch":{"xref_id":"0002114"}}}


id: MONDO:0005506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An cancer with eccrine differentiation arising from the sweat glands.B","definition_xrefs":["EFO:0005553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine sweat gland neoplasm","termid":"MONDO:0002090"},{"relation_name":"is_a","term_name":"sweat gland cancer","termid":"MONDO:0002206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"eccrine sweat gland cancer","secondary_identifiers":["MEDGEN:233660","NCIT:C5559","DOID:4921","UMLS:C1334577"],"synonyms":[{"name":"cancer of eccrine sweat gland","type":"exact"},{"name":"eccrine sweat gland cancer","type":"exact"},{"name":"malignant eccrine neoplasm","type":"exact"},{"name":"malignant eccrine neoplasm of skin","type":"exact"},{"name":"malignant eccrine neoplasm of the skin","type":"exact"},{"name":"malignant eccrine skin neoplasm","type":"exact"},{"name":"malignant eccrine skin tumor","type":"exact"},{"name":"malignant eccrine skin tumour","type":"exact"},{"name":"malignant eccrine sweat gland neoplasm","type":"exact"},{"name":"malignant eccrine tumor","type":"exact"},{"name":"malignant eccrine tumor of skin","type":"exact"},{"name":"malignant eccrine tumor of the skin","type":"exact"},{"name":"malignant eccrine tumour","type":"exact"},{"name":"malignant eccrine tumour of skin","type":"exact"},{"name":"malignant eccrine tumour of the skin","type":"exact"},{"name":"malignant neoplasm of eccrine sweat gland","type":"exact"}],"termid":"MONDO:0005506","xrefs":{"Monarch":{"xref_id":"0005506"}}}


id: MONDO:0006202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the extrahepatic bile ducts. It is characterized by the presence of glandular and squamous malignant epithelial components.","definition_xrefs":["NCIT:C5778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosquamous bile duct carcinoma","termid":"MONDO:0003549"},{"relation_name":"is_a","term_name":"extrahepatic bile duct squamous cell carcinoma","termid":"MONDO:0006203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic bile duct adenosquamous carcinoma","secondary_identifiers":["EFO:1000247"],"synonyms":[{"name":"adenosquamous bile duct carcinoma","type":"narrow"},{"name":"adenosquamous carcinoma of bile duct","type":"narrow"},{"name":"adenosquamous carcinoma of the bile duct","type":"narrow"},{"name":"bile duct adenosquamous carcinoma","type":"narrow"},{"name":"extrahepatic bile duct adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0006202","xrefs":{"Monarch":{"xref_id":"0006202"}}}


id: MONDO:0100469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of anosmia, isolated congenital.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anosmia","termid":"MONDO:0010528"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anosmia, isolated congenital, X-linked","secondary_identifiers":["MEDGEN:1794322","OMIM:301700","UMLS:C5562112"],"termid":"MONDO:0100469","xrefs":{"Monarch":{"xref_id":"0100469"}}}


id: PBO:0046993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member D","termid":"PBO:0046993"}


id: MONDO:1040036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by an autosomal dominant variant in the IMPG1 gene.","definition_xrefs":["PMID:36109576","PMID:32817297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"IMPG1-related dominant retinopathy","synonyms":[{"name":"IMPG1-related dominant retinopathy","type":"exact"}],"termid":"MONDO:1040036","xrefs":{"Monarch":{"xref_id":"1040036"}}}


id: FYPO:0001309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased viability in stationary phase","synonyms":[{"name":"decreased chronological cell aging","type":"related"},{"name":"increased cell population viability in stationary phase","type":"exact"},{"name":"increased chronological lifespan","type":"related"},{"name":"increased longevity","type":"exact"}],"termid":"FYPO:0001309"}


id: GO:0033722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxopropanoate + NAD(P)+ + H2O = malonate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"malonate-semialdehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:MALONATE-SEMIALDEHYDE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"3-oxopropanoate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"malonic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0033722"}


id: MONDO:0014037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the KLHL10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 11","secondary_identifiers":["MEDGEN:767367","UMLS:C3554453","DOID:0070180","OMIM:615081","GARD:15904"],"synonyms":[{"name":"KLHL10 azoospermia","type":"exact"},{"name":"SPGF11","type":"related"},{"name":"azoospermia caused by mutation in KLHL10","type":"exact"},{"name":"spermatogenic failure 11","type":"exact"},{"name":"spermatogenic failure type 11","type":"exact"}],"termid":"MONDO:0014037","xrefs":{"Monarch":{"xref_id":"0014037"}}}


id: PBO:0046604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 6","termid":"PBO:0046604"}


id: PBO:0043114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic iron-sulfur assembly component 1","termid":"PBO:0043114"}


id: PBO:0042503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related 23","termid":"PBO:0042503"}


id: FYPO:0003889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is thinner than normal at the old end of the cell.","definition_xrefs":["PMID:10547441","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall thickness at cell tip during vegetative growth","termid":"FYPO:0006746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002946"],"is_obsolete":false,"name":"decreased cell wall thickness at old end during vegetative growth","synonyms":[{"name":"decreased cell wall thickness at growing end during vegetative growth","type":"related"},{"name":"decreased cell wall thickness at old end during mitotic cell cycle","type":"related"},{"name":"reduced cell wall thickness at old end during vegetative growth","type":"exact"},{"name":"thin cell wall at old end during vegetative growth","type":"exact"}],"termid":"FYPO:0003889"}


id: GO:0018400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-proline to form 3-hydroxy-L-proline; catalyzed by procollagen-proline 3-dioxygenase.","definition_xrefs":["RESID:AA0029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"peptidyl-proline hydroxylation","termid":"GO:0019511"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation to 3-hydroxy-L-proline","termid":"GO:0018400"}


id: GO:0015370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + Na+(out) = solute(in) + Na+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"solute:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-8876283"],"synonyms":[{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"narrow"}],"termid":"GO:0015370"}


id: PBO:0001832
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.75","termid":"PBO:0001832"}


id: GO:0140666
data:
  {"annotated_genes":["SJAG_03780","SJAG_03682","SJAG_01643","SJAG_03832","SJAG_00871"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112321,115709,113183,102977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990814"},{"annotations":[107107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033592"}]},"cv_name":"molecular_function","definition":"An activity that facilitates the formation of a complementary double-stranded polynucleotide molecule.","definition_xrefs":["PMID:22888405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid binding","termid":"GO:0003676"},{"relation_name":"is_a","term_name":"nucleic acid conformation isomerase activity","termid":"GO:0120545"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a nucleic acid","termid":"GO:0140640"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_01643":null,"SJAG_03682":null,"SJAG_03780":null,"SJAG_03832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0005488","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"annealing activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097617","Reactome:R-HSA-5686642"],"synonyms":[{"name":"renaturation","type":"related"}],"termid":"GO:0140666","terms_by_termid":{"GO:0033592":null,"GO:1990814":null}}


id: MONDO:0014764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia-severe developmental delay-epilepsy syndrome is a rare, genetic, complex spastic paraplegia disorder characterized by an infantile-onset of psychomotor developmental delay with severe intellectual disability and poor speech acquisition, associated with seizures (mostly myoclonic), muscular hypotonia which may be noted at birth, and slowly progressive spasticity in the lower limbs leading to severe gait disturbances. Ocular abnormalities and incontinence are commonly associated. Other symptoms may include verbal dyspraxia, hypogenitalism, macrocephaly and sensorineural hearing loss, as well as dystonic movements and ataxia with upper limb involvement.","definition_xrefs":["Orphanet:464282"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005027","MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia-severe developmental delay-epilepsy syndrome","secondary_identifiers":["MEDGEN:897828","OMIM:616756","GARD:17816","UMLS:C4225215"],"synonyms":[{"name":"SPPRS","type":"related"},{"name":"SPPRS syndrome","type":"exact"},{"name":"spastic paraplegia and psychomotor retardation with or without seizures","type":"related"},{"name":"spastic paraplegia-psychomotor retardation-seizures syndrome","type":"exact"}],"termid":"MONDO:0014764","xrefs":{"Monarch":{"xref_id":"0014764"}}}


id: FYPO:0002517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to mitotic cell cycle checkpoint signaling is abnormal (does not occur, or occurs abnormally). Abnormal arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"},{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"abnormal response to mitotic cell cycle checkpoint signaling","synonyms":[{"name":"abnormal mitotic cell cycle checkpoint arrest","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from checkpoint activation","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from defective checkpoint activation","type":"related"}],"termid":"FYPO:0002517"}


id: PBO:0031493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_assembly","termid":"PBO:0031493"}


id: MONDO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete parachordoma (obsolete MONDO:0002374)","termid":"MONDO:0002374","xrefs":{"Monarch":{"xref_id":"0002374"}}}


id: PBO:0071038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 40","termid":"PBO:0071038"}


id: MOD:00068
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-myristoylglycine.","definition_xrefs":["Unimod:45#G","PubMed:1326520","RESID:AA0059","PubMed:11955007","PubMed:11955008","PubMed:1386601","PubMed:6436247","OMSSA:80","PubMed:7543369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-myristoylated residue","termid":"MOD:00650"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-myristoylglycine","synonyms":[{"name":"(tetradecanoylamino)ethanoic acid","type":"exact"},{"name":"LIPID N-myristoyl glycine","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"related"},{"name":"N-(1-oxotetradecyl)glycine","type":"exact"},{"name":"N-(C14:0 aliphatic acyl)glycine","type":"exact"},{"name":"N-myristoyl-glycine","type":"exact"},{"name":"N-myristoylated glycine","type":"exact"},{"name":"N-myristylglycine","type":"exact"},{"name":"N-tetradecanoylglycine","type":"exact"},{"name":"NMyrGly","type":"exact"},{"name":"ntermpepmyristoylationg","type":"exact"}],"termid":"MOD:00068"}


id: PBO:0042570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A interacting protein","termid":"PBO:0042570"}


id: GO:1900527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of nucleus size that is involved in G1 to G0 transition.","definition_xrefs":["GOC:TermGenie","PMID:19366728","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nucleus size involved in G1 to G0 transition (obsolete GO:1900527)","synonyms":[{"name":"regulation of nuclear size involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nuclear size involved in G1/G0 transition","type":"exact"},{"name":"regulation of nuclear size involved in cell cycle quiescence","type":"related"},{"name":"regulation of nuclear size involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nuclear size involved in stationary phase","type":"related"},{"name":"regulation of nuclear volume involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nuclear volume involved in G1/G0 transition","type":"exact"},{"name":"regulation of nuclear volume involved in cell cycle quiescence","type":"related"},{"name":"regulation of nuclear volume involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nuclear volume involved in stationary phase","type":"related"},{"name":"regulation of nucleus size involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nucleus size involved in G1/G0 transition","type":"exact"},{"name":"regulation of nucleus size involved in cell cycle quiescence","type":"related"},{"name":"regulation of nucleus size involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nucleus size involved in stationary phase","type":"related"}],"termid":"GO:1900527"}


id: GO:0043891
data:
  {"annotated_genes":["SJAG_06622","SJAG_02945","SJAG_00027","SJAG_03903","SJAG_03828","SJAG_02135","SJAG_06621"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109195,109196,109197,74526,80195,72225,109191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004365"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD(P)+ = 3-phospho-D-glyceroyl phosphate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_02135":null,"SJAG_02945":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (phosphorylating) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GAPDHSYNEC-RXN"],"synonyms":[{"name":"D-glyceraldehyde 3-phosphate:NAD(P)+ oxidoreductase (phosphorylating)","type":"exact"},{"name":"NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase activity","type":"related"},{"name":"glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) (phosphorylating)","type":"exact"},{"name":"triosephosphate dehydrogenase (NAD(P))","type":"exact"},{"name":"triosephosphate dehydrogenase (NAD(P)+)","type":"related"}],"termid":"GO:0043891","terms_by_termid":{"GO:0004365":null}}


id: GO:0016018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cyclosporin A, a cyclic undecapeptide that contains several N-methylated and unusual amino acids.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cyclosporin A binding","synonyms":[{"name":"cyclophilin","type":"related"}],"termid":"GO:0016018"}


id: _global:go_annotation_extension_relation
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"go_annotation_extension_relation","secondary_identifiers":["GOREL:0000000"],"termid":"_global:go_annotation_extension_relation"}


id: PBO:0074972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-14","termid":"PBO:0074972"}


id: PBO:0077236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 2","termid":"PBO:0077236"}


id: GO:0050914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a salty taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of salty taste","synonyms":[{"name":"salty taste perception","type":"exact"}],"termid":"GO:0050914"}


id: PBO:0061540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP2/Sun RNA methyltransferase 5","termid":"PBO:0061540"}


id: PBO:0083182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the ORF YDL025C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083182"}


id: PBO:0073993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 3","termid":"PBO:0073993"}


id: PBO:0045701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 1A","termid":"PBO:0045701"}


id: PBO:0031326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cycloheximide","termid":"PBO:0031326"}


id: PR:Q9HDU8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDU8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein PB2B2.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.07c","synonyms":[{"name":"Spom972h-SPBPB2B2.07c","type":"exact"}],"termid":"PR:Q9HDU8"}


id: PBO:0087846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Topoisomerase I; nuclear enzyme that relieves torsional strain in DNA by cleaving and re-sealing the phosphodiester backbone; relaxes both positively and negatively supercoiled DNA; functions in replication, transcription, and recombination; role in processing ribonucleoside monophosphates in genomic DNA into irreversible single-strand breaks; enzymatic activity and interaction with Nsr1p are negatively regulated by polyphosphorylation","termid":"PBO:0087846"}


id: FYPO:0001099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing carbonyl cyanide m-chlorophenyl hydrazone (CCCP).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0000003","FYPO:0000257","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on CCCP","synonyms":[{"name":"normal cell population growth in presence of CCCP","type":"exact"},{"name":"normal cell population growth on CCCP","type":"exact"},{"name":"normal cell population growth on carbonyl cyanide m-chlorophenyl hydrazone","type":"exact"},{"name":"normal cellular response to CCCP","type":"related"},{"name":"normal vegetative cell population growth on CCCP","type":"exact"}],"termid":"FYPO:0001099"}


id: PBO:0080950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 4","termid":"PBO:0080950"}


id: PBO:0053919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1216","termid":"PBO:0053919"}


id: MONDO:0000577
data:
  {"annotated_genes":["SJAG_00930","SJAG_02339","SJAG_03153","SJAG_01410","SJAG_00611","SJAG_05180","SJAG_02297","SJAG_00839","SJAG_02708","SJAG_02796","SJAG_00319","SJAG_02556","SJAG_02539","SJAG_00088","SJAG_04473"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[85255,85256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009134"},{"annotations":[85299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007109"},{"annotations":[86117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013248"},{"annotations":[86541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013499"},{"annotations":[84823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014108"},{"annotations":[86796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014986"},{"annotations":[86800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014987"},{"annotations":[86797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014985"},{"annotations":[85983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[86690,86689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024553"},{"annotations":[87041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013307"},{"annotations":[85400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"}]},"cv_name":"mondo","definition":"Anemia, the cause of which is present at birth.","definition_xrefs":["NCIT:C35228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_00611":null,"SJAG_00839":null,"SJAG_00930":null,"SJAG_01410":null,"SJAG_02297":null,"SJAG_02339":null,"SJAG_02539":null,"SJAG_02556":null,"SJAG_02708":null,"SJAG_02796":null,"SJAG_03153":null,"SJAG_04473":null,"SJAG_05180":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"congenital anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:102361","UMLS:C0158995","SCTID:63565007"],"synonyms":[{"name":"congenital anaemia (disease)","type":"exact"},{"name":"congenital anemia","type":"exact"},{"name":"congenital anemia (disease)","type":"exact"}],"termid":"MONDO:0000577","terms_by_termid":{"MONDO:0007109":null,"MONDO:0009134":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0013248":null,"MONDO:0013275":null,"MONDO:0013307":null,"MONDO:0013499":null,"MONDO:0014108":null,"MONDO:0014985":null,"MONDO:0014986":null,"MONDO:0014987":null,"MONDO:0024553":null},"xrefs":{"Monarch":{"xref_id":"0000577"}}}


id: GO:0019288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["PMID:18948055","GOC:go_curators","MetaCyc:NONMEVIPP-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopentenyl diphosphate biosynthetic process","termid":"GO:0009240"},{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","synonyms":[{"name":"isopentenyl diphosphate anabolism, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthesis, mevalonate-independent","type":"exact"},{"name":"isopentenyl diphosphate biosynthesis, non-mevalonate pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, MEP pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate-independent","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, non-mevalonate pathway","type":"exact"},{"name":"isopentenyl diphosphate formation, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate synthesis, mevalonate-independent pathway","type":"exact"},{"name":"mevalonate-independent isopentenyl diphosphate biosynthesis","type":"exact"},{"name":"mevalonate-independent isopentenyl diphosphate biosynthetic process","type":"exact"},{"name":"non-MVA pathway","type":"exact"}],"termid":"GO:0019288"}


id: FYPO:0001118
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04280:allele-3":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-3"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119050,119272,119038],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001122"},{"annotations":[119082],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[119180,119059,119179,119183],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0000648"},{"annotations":[118908,118897,118902,118934],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"},{"annotations":[119181,119182,119188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001877"},{"annotations":[119186,119187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cell morphology (i.e. the size, shape, or structure of the cell) is altered in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell morphology","termid":"FYPO:0000005"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative 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id: GO:0017028
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id: PBO:0059178
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose receptor C-type 1","termid":"PBO:0059178"}


id: PBO:0048087
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 8","termid":"PBO:0048087"}


id: FYPO:0007289
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of UDP-glucose 4-epimerase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal UDP-glucose 4-epimerase activity","termid":"FYPO:0007289"}


id: MONDO:0001799
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"localized anterior staphyloma","secondary_identifiers":["SCTID:21946002","MEDGEN:509936","DOID:13787","ICD9:379.14","UMLS:C0155362"],"synonyms":[{"name":"anterior staphyloma, localised","type":"exact"},{"name":"anterior staphyloma, localized","type":"exact"}],"termid":"MONDO:0001799","xrefs":{"Monarch":{"xref_id":"0001799"}}}


id: PBO:0057128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 211","termid":"PBO:0057128"}


id: PR:Q9P7Q7
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mak1 gene.","definition_xrefs":["UniProtKB:Q9P7Q7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxide stress-activated histidine kinase mak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.08","synonyms":[{"name":"Spom972h-mak1","type":"exact"},{"name":"his-Asp phosphorelay kinase phk3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mcs4-associated kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7Q7"}


id: PBO:0070764
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11","termid":"PBO:0070764"}


id: PBO:0066949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 251","termid":"PBO:0066949"}


id: PBO:0048858
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 3 Y-linked","termid":"PBO:0048858"}


id: PBO:0112902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase alpha subunit Sca1","termid":"PBO:0112902"}


id: GO:0046228
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4,5-trichlorophenoxyacetic acid, a chlorinated aromatic compound widely used as a herbicide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4,5-trichlorophenoxyacetic acid metabolic process","termid":"GO:0018980"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2,4,5-trichlorophenoxyacetic acid catabolic process","synonyms":[{"name":"2,4,5-trichlorophenoxyacetic acid breakdown","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid catabolism","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid degradation","type":"exact"}],"termid":"GO:0046228"}


id: SO:0000239
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequences extending on either side of a specific region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topologically_defined_region","termid":"SO:0001412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanking_region","synonyms":[{"name":"flanking region","type":"exact"}],"termid":"SO:0000239"}


id: GO:0004499
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id: FYPO:0005585
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more triglycerides measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular triglyceride level during vegetative growth","synonyms":[{"name":"decreased cellular TAG level during vegetative growth","type":"exact"},{"name":"decreased cellular triacylglycerol level during vegetative growth","type":"exact"},{"name":"decreased cellular triglyceride level during mitotic cell cycle","type":"related"},{"name":"decreased triglyceride accumulation during vegetative growth","type":"related"},{"name":"reduced cellular triglyceride level during vegetative growth","type":"exact"}],"termid":"FYPO:0005585"}


id: PBO:0034814
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol-serine O-phosphatidyltransferase Pps1","termid":"PBO:0034814"}


id: PBO:0003975
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex subunit Sfc6","termid":"PBO:0003975"}


id: GO:0072524
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chemical reactions and pathways involving a pyridine-containing compound, i.e. any compound that contains pyridine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic 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id: PBO:0071986
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id: GO:1904143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of carotenoid biosynthetic process.","definition_xrefs":["PMID:25675505","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"positively_regulates","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of carotenoid biosynthetic process","synonyms":[{"name":"activation of carotenoid anabolism","type":"narrow"},{"name":"activation of carotenoid biosynthesis","type":"narrow"},{"name":"activation of carotenoid biosynthetic process","type":"narrow"},{"name":"activation of carotenoid formation","type":"narrow"},{"name":"activation of carotenoid synthesis","type":"narrow"},{"name":"positive regulation of carotenoid anabolism","type":"exact"},{"name":"positive regulation of carotenoid biosynthesis","type":"exact"},{"name":"positive regulation of carotenoid formation","type":"exact"},{"name":"positive regulation of carotenoid synthesis","type":"exact"},{"name":"up regulation of carotenoid anabolism","type":"exact"},{"name":"up regulation of carotenoid biosynthesis","type":"exact"},{"name":"up regulation of carotenoid biosynthetic process","type":"exact"},{"name":"up regulation of carotenoid formation","type":"exact"},{"name":"up regulation of carotenoid synthesis","type":"exact"},{"name":"up-regulation of carotenoid anabolism","type":"exact"},{"name":"up-regulation of carotenoid biosynthesis","type":"exact"},{"name":"up-regulation of carotenoid biosynthetic process","type":"exact"},{"name":"up-regulation of carotenoid formation","type":"exact"},{"name":"up-regulation of carotenoid synthesis","type":"exact"},{"name":"upregulation of carotenoid anabolism","type":"exact"},{"name":"upregulation of carotenoid biosynthesis","type":"exact"},{"name":"upregulation of carotenoid biosynthetic process","type":"exact"},{"name":"upregulation of carotenoid formation","type":"exact"},{"name":"upregulation of carotenoid synthesis","type":"exact"}],"termid":"GO:1904143"}


id: MONDO:0000800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a brown shrimp.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete brown shrimp allergy (obsolete MONDO:0000800)","secondary_identifiers":["DOID:0060525"],"synonyms":[{"name":"Farfantepenaeus aztecus allergy","type":"exact"},{"name":"allergy of brown shrimp","type":"exact"},{"name":"brown shrimp allergic disease","type":"exact"}],"termid":"MONDO:0000800","xrefs":{"Monarch":{"xref_id":"0000800"}}}


id: MONDO:0021918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arena syndrome","secondary_identifiers":["UMLS:C2931491","MESH:C537428","MEDGEN:444068"],"synonyms":[{"name":"spastic paraplegia with iron deposits in basal ganglia","type":"related"}],"termid":"MONDO:0021918","xrefs":{"Monarch":{"xref_id":"0021918"}}}


id: PBO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, poly(A)-bearing RNA (predicted)","termid":"PBO:0000102"}


id: MONDO:0002904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A symptom of neurologic or psychiatric dysfunction in which the individual involuntarily and meaninglessly repeats a recently heard word, series of words, or a song.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"speech disorder","termid":"MONDO:0004730"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"echolalia","secondary_identifiers":["HP:0010529","icd11.foundation:928818606","MESH:D004454","UMLS:C0013528","MEDGEN:8532","DOID:4188"],"synonyms":[{"name":"echolalia","type":"exact"},{"name":"echolalia (disease)","type":"exact"}],"termid":"MONDO:0002904","xrefs":{"Monarch":{"xref_id":"0002904"}}}


id: MONDO:0021948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"extrapulmonary tuberculosis","termid":"MONDO:0000368"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous tuberculosis","secondary_identifiers":["SCTID:66986005","UMLS:C0041309","icd11.foundation:625292625","MEDGEN:22515"],"synonyms":[{"name":"Cutaneous Tuberculoses","type":"related"},{"name":"Cutaneous Tuberculosis","type":"related"},{"name":"Cutaneous tuberculosis","type":"related"},{"name":"Skin Tuberculoses","type":"related"},{"name":"Skin Tuberculosis","type":"related"},{"name":"Tuberculoderma","type":"related"},{"name":"Tuberculoses, Cutaneous","type":"related"},{"name":"Tuberculoses, Skin","type":"related"},{"name":"Tuberculosis cutis","type":"related"},{"name":"Tuberculosis of skin","type":"related"},{"name":"Tuberculosis, Cutaneous","type":"related"},{"name":"Tuberculosis, Skin","type":"related"},{"name":"cutaneous tuberculosis","type":"exact"},{"name":"tuberculoderma","type":"related"},{"name":"tuberculosis cutis","type":"related"},{"name":"tuberculosis of skin","type":"exact"}],"termid":"MONDO:0021948","xrefs":{"Monarch":{"xref_id":"0021948"}}}


id: PBO:0089290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein But2, similar to cell surface molecules","termid":"PBO:0089290"}


id: GO:0021757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the caudate nucleus over time from its initial formation until its mature state. The caudate nucleus is the C-shaped structures of the striatum containing input neurons involved with control of voluntary movement in the brain.","definition_xrefs":["ISBN:0878937420","GOC:cls","GOC:jid","GOC:dph","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudate nucleus development","termid":"GO:0021757"}


id: PR:Q9Y700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor Tu 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor Tu, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.04c","secondary_identifiers":["UniProtKB:Q9Y700"],"synonyms":[{"name":"Spom972h-tufB","type":"exact"}],"termid":"PR:Q9Y700"}


id: MOD:01375
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a (2S,4R)-4,5-dihydroxyleucine.","definition_xrefs":["RESID:AA0445","PubMed:6010785","PubMed:6893271","ChEBI:141823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated leucine","termid":"MOD:01412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,4R)-4,5-dihydroxyleucine","synonyms":[{"name":"(2S,4R)-2-amino-4,5-dihydroxy-4-methylpentanoic acid","type":"exact"},{"name":"(2S,4R)-4,5-dihydroxyleucine","type":"exact"},{"name":"(4R)-4,5-dihydroxyleucine","type":"exact"},{"name":"MOD_RES (4R)-4,5-dihydroxyleucine","type":"exact"},{"name":"gamma,delta-dihydroxyleucine","type":"exact"}],"termid":"MOD:01375"}


id: PBO:0088032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin activating enzyme (E1); involved in ubiquitin-mediated protein degradation and essential for viability; protein abundance increases in response to DNA replication stress","termid":"PBO:0088032"}


id: GO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the lens are generated and organized. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"lens development in camera-type eye","termid":"GO:0002088"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens morphogenesis in camera-type eye","synonyms":[{"name":"lens morphogenesis","type":"exact"},{"name":"lens morphogenesis in camera-style eye","type":"exact"}],"termid":"GO:0002089"}


id: PBO:0033813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human SMARCD1, SMARCD2 and SMARCD3 ortholog","termid":"PBO:0033813"}


id: GO:0061547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + (1,4)-alpha-D-glucosyl(n) = UMP + (1,4)-alpha-D-glucosyl(n)-glucose-1-phosphate.","definition_xrefs":["PMID:21356517","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glycogen synthase activity, transferring glucose-1-phosphate","secondary_identifiers":["Reactome:R-HSA-3780994","Reactome:R-HSA-3781024"],"termid":"GO:0061547"}


id: GO:0046737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intentional, virally-encoded stimulation of a cell-mediated host defense response to viral infection.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of cell-mediated immune response in host by virus (obsolete GO:0046737)","synonyms":[{"name":"active induction of cell-mediated immune response in host by virus","type":"related"},{"name":"active viral induction of cell-mediated immune response in host","type":"exact"}],"termid":"GO:0046737"}


id: PBO:0076267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWIM-type zinc finger 7 associated protein 1","termid":"PBO:0076267"}


id: PBO:0089060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, MIZ-type","termid":"PBO:0089060"}


id: PBO:0055422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2852","termid":"PBO:0055422"}


id: GO:0035634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of exposure to a stilbenoid. Stilbenoids are secondary products of heartwood formation in trees that can act as phytoalexins. Stilbenoids are hydroxylated derivatives of stilbene. They belong to the family of phenylpropanoids and share most of their biosynthesis pathway with chalcones.","definition_xrefs":["Wikipedia:Stilbenoid","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to stilbenoid","termid":"GO:0035634"}


id: MONDO:1012066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary dwarfism, non-human animal","termid":"MONDO:1011943"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary dwarfism, dog","secondary_identifiers":["OMIA:000307-9615"],"termid":"MONDO:1012066","xrefs":{"Monarch":{"xref_id":"1012066"}}}


id: PBO:0069066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 313, pseudogene","termid":"PBO:0069066"}


id: FYPO:0003182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which sister chromatids are not segregated equally to the two spindle poles in the second meiotic nuclear division.","definition_xrefs":["PMID:10440376","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal meiotic chromosome segregation","termid":"FYPO:0000925"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"sister chromatid nondisjunction at meiosis II","secondary_identifiers":["FYPO:0006416","FYPO:0003605"],"synonyms":[{"name":"abnormal chromosome disjunction during meiosis II","type":"exact"},{"name":"abnormal meiotic sister chromatid disjunction","type":"exact"},{"name":"abolished meiotic sister chromatid separation","type":"related"},{"name":"meiosis II nondisjunction","type":"related"},{"name":"nondisjunction at meiosis II","type":"exact"},{"name":"nondisjunction of sister chromatids in meiosis II","type":"exact"},{"name":"unequal meiotic chromosome segregation during meiosis II","type":"exact"},{"name":"unequal meiotic sister chromatid segregation in meiosis II","type":"exact"}],"termid":"FYPO:0003182"}


id: GO:0061898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinoic acid + 2 H+ + O2 + 2 reduced [adrenodoxin] = all-trans-3,4-didehydro retinoic acid + 2 H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:27059013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"all-trans retinoic acid 3,4-desaturase activity","termid":"GO:0061898"}


id: MONDO:0010154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trigonocephaly-bifid nose-acral anomalies syndrome is characterized by trigonocephaly, brachycephaly, bulbous nose (bifid at the tip), micrognathia, macrostomia, hypotonia and relatively broad metatarsals and phalanges.","definition_xrefs":["Orphanet:3368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigonocephaly-bifid nose-acral anomalies syndrome","secondary_identifiers":["UMLS:C1848743","GARD:5126","OMIM:275595","MESH:C564759","MEDGEN:341296"],"synonyms":[{"name":"trigonobrachycephaly, bulbous bifid nose, macrostomia, micrognathia, acral anomalies, and hypotonia","type":"related"},{"name":"trigonobrachycephaly, bulbous bifid nose, micrognathia, and abnormalities of the hands and feet","type":"related"},{"name":"trigonocephaly - bifid nose - acral anomalies","type":"related"}],"termid":"MONDO:0010154","xrefs":{"Monarch":{"xref_id":"0010154"}}}


id: GO:0019368
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91738,77439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"}]},"cv_name":"biological_process","definition":"Elongation of a fatty acid chain into which one or more C-C double bonds have been introduced.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid elongation","termid":"GO:0030497"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"fatty acid elongation, unsaturated fatty acid","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY0-862"],"termid":"GO:0019368","terms_by_termid":{"GO:0034625":null}}


id: MONDO:1010167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gangliosidosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gangliosidosis, non-human animal","secondary_identifiers":["OMIA:000401"],"termid":"MONDO:1010167","xrefs":{"Monarch":{"xref_id":"1010167"}}}


id: MONDO:0014231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease in which the cause of the disease is a mutation in the DNAJC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile-onset Parkinson disease","termid":"MONDO:0000828"},{"relation_name":"is_a","term_name":"atypical juvenile parkinsonism","termid":"MONDO:0018321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile onset Parkinson disease 19A","secondary_identifiers":["MEDGEN:816141","GARD:18461","UMLS:C3809811","OMIM:615528","DOID:0060891"],"synonyms":[{"name":"DNAJC6 Parkinson disease","type":"exact"},{"name":"PARK19","type":"related"},{"name":"PARK19A","type":"related"},{"name":"Park19, formerly","type":"related"},{"name":"Parkinson disease 19, juvenile-onset","type":"related"},{"name":"Parkinson disease 19A, juvenile-onset","type":"related"},{"name":"Parkinson disease 19B, early-onset","type":"related"},{"name":"Parkinson disease caused by mutation in DNAJC6","type":"exact"},{"name":"juvenile onset Parkinson disease 19A","type":"exact"},{"name":"juvenile onset Parkinson disease type 19A","type":"exact"},{"name":"juvenile onset Parkinson's disease 19A","type":"related"}],"termid":"MONDO:0014231","xrefs":{"Monarch":{"xref_id":"0014231"}}}


id: PR:000050570
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septation initiation network scaffold protein cdc11 (Schizosaccharomyces pombe) that includes phosphorylated residues at a level greater than the interphase-observed phosphorylated form, and is only observed during mitotic anaphase.","definition_xrefs":["PMID:12546793","PRO:DAN","PomBase:VW"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc11/HyperPhos","pombase_gene_id":"SPCC1739.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: septation initiation network scaffold protein cdc11 hyperphosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc11/HyperPhos+","type":"exact"},{"name":"cdc11/HyperPhos","type":"exact"},{"name":"cdc11p hyperphosphorylated form (3) (Schizosaccharomyces pombe)","type":"related"}],"termid":"PR:000050570"}


id: PBO:0036226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation_of_ribosomal_proteins_during_vegetative_growth","termid":"PBO:0036226"}


id: MONDO:0017767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A post-bacterial multisystem inflammatory disease occurring as a post-infectious, nonsuppurative sequela of untreated streptococcus pyogenes (Group A streptococcus [GAS]) pharyngitis, and mainly occurs in individuals aged 5 to 15 years. The most common presenting signs are fever, migratory polyarthritis and carditis.","definition_xrefs":["Orphanet:3099"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"excluded_subClassOf","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"excluded_subClassOf","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"post-bacterial disorder","termid":"MONDO:0021673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatic fever","secondary_identifiers":["MESH:D012213","SCTID:58718002","MedDRA:10039054","NCIT:C34984","GARD:5699","UMLS:C0035436","DOID:1586","ICD9:390-392.99","EFO:1001160","NORD:1668","ICD9:390","ICD10CM:I00-I02","SCTID:81077008","MEDGEN:48448"],"synonyms":[{"name":"ARF","type":"exact"},{"name":"RHF - rheumatic fever","type":"exact"},{"name":"acute rheumatic fever","type":"exact"},{"name":"inflammatory rheumatism","type":"related"}],"termid":"MONDO:0017767","xrefs":{"Monarch":{"xref_id":"0017767"}}}


id: PBO:0027898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_siRNA_level","termid":"PBO:0027898"}


id: FYPO:0004518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and branched (and septated) and is curved along the long axis, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, branched, elongated cell","termid":"FYPO:0002170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, branched, curved, elongated cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated, curved and branched cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, branched, curved, elongated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, branched, curved, elongated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, branched, curved, elongated cell","type":"exact"}],"termid":"FYPO:0004518"}


id: PBO:0032743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B epsilon subunit","termid":"PBO:0032743"}


id: PBO:0028048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_cytoplasmic_interphase_microtubules","termid":"PBO:0028048"}


id: GO:1905035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an antifungal innate immune response.","definition_xrefs":["GOC:TermGenie","PMID:22470487","GO_REF:0000058","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"regulation of antifungal innate immune response","termid":"GO:1905034"},{"relation_name":"negatively_regulates","term_name":"antifungal innate immune response","termid":"GO:0061760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antifungal innate immune response","synonyms":[{"name":"down regulation of antifungal innate immune response","type":"exact"},{"name":"down-regulation of antifungal innate immune response","type":"exact"},{"name":"downregulation of antifungal innate immune response","type":"exact"},{"name":"inhibition of antifungal innate immune response","type":"narrow"}],"termid":"GO:1905035"}


id: PBO:0080712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 16","termid":"PBO:0080712"}


id: FYPO:0002541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to nucleoplasm","synonyms":[{"name":"increased protein localisation to nucleoplasm","type":"exact"},{"name":"increased protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0002541"}


id: GO:2000252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of feeding behavior.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"regulation of feeding behavior","termid":"GO:0060259"},{"relation_name":"negatively_regulates","term_name":"feeding behavior","termid":"GO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of feeding behavior","synonyms":[{"name":"negative regulation of behavioral response to food","type":"exact"},{"name":"negative regulation of behavioural response to food","type":"exact"},{"name":"negative regulation of drinking","type":"related"},{"name":"negative regulation of eating","type":"related"},{"name":"negative regulation of feeding behaviour","type":"exact"}],"termid":"GO:2000252"}


id: GO:0019454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme glutathione-cystine transhydrogenase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process via cystine","termid":"GO:0019453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine, using glutathione-cystine transhydrogenase","synonyms":[{"name":"L-cysteine breakdown via cystine, using glutathione-cystine transhydrogenase","type":"exact"},{"name":"L-cysteine degradation via cystine, using glutathione-cystine transhydrogenase","type":"exact"}],"termid":"GO:0019454"}


id: PBO:0048575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametogenetin binding protein 2","termid":"PBO:0048575"}


id: PBO:0083520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MST27","termid":"PBO:0083520"}


id: GO:0102222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: m+q H2O + a 6-phosphogluco-3-phosphogluco-amylopectin = m+q hydrogenphosphate + a 6-phosphogluco-3-phosphogluco-amylopectin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-phosophogluco-3-phosphogluco-starch phosphatase activity (obsolete GO:0102222)","termid":"GO:0102222"}


id: FYPO:0000734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the structure of the meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle","termid":"FYPO:0000120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0002399","FYPO:0000002","FYPO:0000120"],"is_obsolete":false,"name":"abnormal meiotic spindle","termid":"FYPO:0000734"}


id: GO:0031266
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed upon binding of TRAIL to its ligand. The complex includes FADD/Mort1 and procaspase-8 addition to the ligand-bound receptor.","definition_xrefs":["PMID:12628743","PMID:12655293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death-inducing signaling complex","termid":"GO:0031264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"TRAIL death-inducing signaling complex","synonyms":[{"name":"TRAIL DISC","type":"exact"},{"name":"TRAIL death-inducing signalling complex","type":"exact"}],"termid":"GO:0031266"}


id: PBO:0065468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 9","termid":"PBO:0065468"}


id: PBO:0029750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_palmitoylation","termid":"PBO:0029750"}


id: GO:0003309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features of a type B pancreatic cell. A type B pancreatic cell is a cell located towards center of the islets of Langerhans that secretes insulin.","definition_xrefs":["GOC:dph","PMID:11076772","CL:0000169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enteroendocrine cell differentiation","termid":"GO:0035883"},{"relation_name":"part_of","term_name":"endocrine pancreas development","termid":"GO:0031018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type B pancreatic cell differentiation","synonyms":[{"name":"pancreatic B cell differentiation","type":"exact"},{"name":"pancreatic beta cell differentiation","type":"exact"}],"termid":"GO:0003309"}


id: MONDO:0010697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ophthalmoplegia, external, and myopia","secondary_identifiers":["MEDGEN:326916","UMLS:C1839577","MESH:C564087","OMIM:311000"],"synonyms":[{"name":"OPEM","type":"exact"},{"name":"myopia-ophthalmoplegia syndrome","type":"related"},{"name":"ophthalmoplegia, external, and myopia","type":"exact"}],"termid":"MONDO:0010697","xrefs":{"Monarch":{"xref_id":"0010697"}}}


id: GO:0003115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of secretion of epinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by epinephrine","termid":"GO:0003115"}


id: PBO:0076382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin precursor 4","termid":"PBO:0076382"}


id: PBO:0059659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 25","termid":"PBO:0059659"}


id: PBO:0055278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2705","termid":"PBO:0055278"}


id: PBO:0064154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 4 pseudogene 1","termid":"PBO:0064154"}


id: GO:0040031
data:
  {"annotated_genes":["SJAG_04754","SJAG_01958","SJAG_00083","SJAG_00566","SJAG_03572","SJAG_01234","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120049"},{"annotations":[59161,79998,106090,114083,77600,106029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotides within snRNA, resulting in a change in the properties of the snRNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"},{"relation_name":"is_a","term_name":"snRNA processing","termid":"GO:0016180"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00088":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_01958":null,"SJAG_03572":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016073","GO:0010467"],"is_obsolete":false,"name":"snRNA modification","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0040031","terms_by_termid":{"GO:0031120":null,"GO:0120049":null}}


id: PBO:0085633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in GPI anchor synthesis; multimembrane-spanning protein that localizes to the endoplasmic reticulum; highly conserved among eukaryotes; GPI stands for glycosylphosphatidylinositol","termid":"PBO:0085633"}


id: GO:1905347
data:
  {"annotated_genes":["SJAG_01044","SJAG_00623"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74138,78975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048476"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of endodeoxyribonuclease activity.","definition_xrefs":["PMID:18413719","GOC:TermGenie","GO_REF:0000088","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease complex","termid":"GO:1905348"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"endodeoxyribonuclease complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Mus81-Eme1 complex","type":"narrow"},{"name":"Mus81-Eme2 complex","type":"narrow"}],"termid":"GO:1905347","terms_by_termid":{"GO:0048476":null}}


id: GO:1904593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to prostaglandin.","definition_xrefs":["PMID:21445266","GO_REF:0000067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative binding","termid":"GO:1901567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"prostaglandin binding","termid":"GO:1904593"}


id: MONDO:0018738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the metanephros.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"benign metanephric tumor","secondary_identifiers":["Orphanet:464359","UMLS:C5681098","MEDGEN:1830110","NCIT:C157748"],"termid":"MONDO:0018738","xrefs":{"Monarch":{"xref_id":"0018738"}}}


id: PBO:0045969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early growth response 2","termid":"PBO:0045969"}


id: GO:0070590
data:
  {"annotated_genes":["SJAG_01321","SJAG_04483","SJAG_04184","SJAG_03013","SJAG_04868","SJAG_00974","SJAG_03587","SJAG_04236","SJAG_03057","SJAG_03483","SJAG_04238"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94257],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[90038,88000,91565,88492],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[72800],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[117586,108866,103963,113871,117578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070591"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a spore wall. A spore wall is the specialized cell wall lying outside the cell membrane of a spore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall biogenesis","termid":"GO:0042546"},{"relation_name":"part_of","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03483":null,"SJAG_03587":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04483":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"spore wall biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070590","terms_by_termid":{"GO:0030476":null,"GO:0034412":null,"GO:0034413":null,"GO:0070591":null}}


id: PBO:0116740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 16 (gene/pseudogene)","termid":"PBO:0116740"}


id: GO:0042459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of octopine into other compounds, including proline.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete octopine catabolic process to proline (obsolete GO:0042459)","synonyms":[{"name":"octopine breakdown to proline","type":"exact"},{"name":"octopine degradation to proline","type":"exact"}],"termid":"GO:0042459"}


id: GO:0043696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a specialized structure (cell, tissue or organ) loses structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these structures can revert back to the features of their ancestors.","definition_xrefs":["GOC:pg","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dedifferentiation","secondary_identifiers":["Wikipedia:Cellular_differentiation#Dedifferentiation"],"termid":"GO:0043696"}


id: MONDO:0010391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"angioma serpiginosum","termid":"MONDO:0019803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioma serpiginosum, X-linked","secondary_identifiers":["MEDGEN:1648301","GARD:10188","OMIM:300652","UMLS:C4721404","MESH:C536366"],"synonyms":[{"name":"angio serpiginosum, X-linked dominant","type":"exact"},{"name":"angioma serpiginosum, X-linked","type":"exact"}],"termid":"MONDO:0010391","xrefs":{"Monarch":{"xref_id":"0010391"}}}


id: PBO:0041728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II gamma","termid":"PBO:0041728"}


id: PBO:0058928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7f-2","termid":"PBO:0058928"}


id: GO:0006859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed extracellular movement of carbohydrates.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular carbohydrate transport (obsolete GO:0006859)","termid":"GO:0006859"}


id: PBO:0025477
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fabry disease","termid":"PBO:0025477"}


id: MONDO:0030924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proteosome-associated autoinflammatory syndrome","termid":"MONDO:0009726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"proteasome-associated autoinflammatory syndrome 5","secondary_identifiers":["GARD:18448","UMLS:C5543027","MEDGEN:1779962","DOID:0060919","OMIM:619175"],"synonyms":[{"name":"PRAAS5","type":"exact"},{"name":"proteasome-associated autoinflammatory syndrome 5","type":"exact"}],"termid":"MONDO:0030924","xrefs":{"Monarch":{"xref_id":"0030924"}}}


id: MONDO:0020351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blake pouch cyst is a non-syndromic, usually benign, cystic malformation of the posterior fossa characterized by a midline outpouching of the superior medullary velum into the cisterna magna that results from failure of the rudimental fourth ventricular tela choroidea to regress during embryogenesis. Patients can be asymptomatic or present in childhood or adulthood with clinical manifestations of hydrocephalus, such as headache, hypotonia, vertigo, syncope, vomiting, blurred or double vision, nystagmus, papilledema, and delayed gait development.","definition_xrefs":["Orphanet:98922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic malformation of the posterior fossa","termid":"MONDO:0020134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"Blake pouch cyst","secondary_identifiers":["MEDGEN:783279","GARD:19603","UMLS:C3662124"],"termid":"MONDO:0020351","xrefs":{"Monarch":{"xref_id":"0020351"}}}


id: GO:0048785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hatching gland over time, from its formation to the mature structure. The cells of the hatching gland contain enzymes responsible for solubilization of the egg chorion, facilitating the hatching process.","definition_xrefs":["GOC:dh","GOC:jid","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hatching gland development","termid":"GO:0048785"}


id: PBO:0011092
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhytoCheletin Synthase","termid":"PBO:0011092"}


id: FYPO:0001064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glycine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycine import","termid":"FYPO:0001063"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased glycine import","synonyms":[{"name":"decreased glycine import across plasma membrane","type":"exact"},{"name":"decreased glycine import during mitotic cell cycle","type":"related"},{"name":"decreased glycine import during vegetative growth","type":"exact"},{"name":"decreased glycine import into cell","type":"exact"},{"name":"decreased glycine uptake","type":"exact"},{"name":"reduced glycine import","type":"exact"}],"termid":"FYPO:0001064"}


id: PBO:0086635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YGL036W is not an essential gene","termid":"PBO:0086635"}


id: PBO:0080558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 2 pseudogene 1","termid":"PBO:0080558"}


id: GO:0140662
data:
  {"annotated_genes":["SJAG_02875","SJAG_00790","SJAG_00609","SJAG_04055","SJAG_02378","SJAG_01186","SJAG_01510","SJAG_01874","SJAG_04121","SJAG_01615","SJAG_04511","SJAG_00447","SJAG_02926","SJAG_03570","SJAG_00564","SJAG_01002","SJAG_03320","SJAG_01664","SJAG_03237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56925,57845,58025,58999,59801,60250,60305,61235,62316,64158,64327,64851,65207,66152,66603,66865,67341,68791,69378],"is_not":false,"summary":null,"term":"GO:0140662"}]},"cv_name":"molecular_function","definition":"Binding to a protein or a protein-containing complex to assist the protein folding process, driven by ATP hydrolysis.","definition_xrefs":["PMID:27365453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone","termid":"GO:0044183"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00447":null,"SJAG_00564":null,"SJAG_00609":null,"SJAG_00790":null,"SJAG_01002":null,"SJAG_01186":null,"SJAG_01510":null,"SJAG_01615":null,"SJAG_01664":null,"SJAG_01874":null,"SJAG_02378":null,"SJAG_02875":null,"SJAG_02926":null,"SJAG_03237":null,"SJAG_03320":null,"SJAG_03570":null,"SJAG_04055":null,"SJAG_04121":null,"SJAG_04511":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"ATP-dependent protein folding chaperone","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0140662","terms_by_termid":{"GO:0140662":null}}


id: PBO:0076703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 4","termid":"PBO:0076703"}


id: PR:O74742
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A folylpolyglutamate synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11136:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.17","secondary_identifiers":["UniProtKB:O74742"],"synonyms":[{"name":"FPGS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1709.17","type":"related"},{"name":"Spom972h-FPGS","type":"exact"},{"name":"folylpoly-gamma-glutamate synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tetrahydrofolate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tetrahydrofolylpolyglutamate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74742"}


id: MONDO:8000031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete subtype of a disorder (obsolete MONDO:8000031)","secondary_identifiers":["Orphanet:557494"],"termid":"MONDO:8000031","xrefs":{"Monarch":{"xref_id":"8000031"}}}


id: MONDO:0014718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SLC12A5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant migrating partial seizures of infancy","termid":"MONDO:0017385"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 34","secondary_identifiers":["DOID:0080460","UMLS:C4225257","MEDGEN:899149","OMIM:616645","GARD:16147"],"synonyms":[{"name":"DEE34","type":"exact"},{"name":"EIEE34","type":"exact"},{"name":"SLC12A5 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 34","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in SLC12A5","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 34","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 34; EIEE34","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 34","type":"exact"}],"termid":"MONDO:0014718","xrefs":{"Monarch":{"xref_id":"0014718"}}}


id: MONDO:0011105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital alacrima","termid":"MONDO:0019627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"alacrima, congenital, autosomal recessive","secondary_identifiers":["OMIM:601549","GARD:18166","UMLS:C4012597","MEDGEN:861034"],"synonyms":[{"name":"alacrima, congenital, autosomal recessive","type":"exact"}],"termid":"MONDO:0011105","xrefs":{"Monarch":{"xref_id":"0011105"}}}


id: GO:0071534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a TRAF-type zinc finger (zf-TRAF) domain interaction.","definition_xrefs":["GOC:amm","InterPro:IPR001293"],"gene_count":0,"genotype_count":0,"name":"obsolete zf-TRAF domain-mediated complex assembly (obsolete GO:0071534)","synonyms":[{"name":"TRAF-type zinc finger domain-mediated complex assembly","type":"exact"},{"name":"zinc finger TRAF-type domain-mediated complex assembly","type":"exact"},{"name":"zinc-finger-TRAF domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071534"}


id: PBO:0003807
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.4.2","termid":"PBO:0003807"}


id: GO:0043430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-decaprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-decaprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:jl","PMID:11583838"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-decaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity (obsolete GO:0043430)","synonyms":[{"name":"2-decaprenyl-6-methoxy-1,4-benzoquinone methylase activity","type":"exact"}],"termid":"GO:0043430"}


id: PBO:0071208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 49","termid":"PBO:0071208"}


id: PBO:0081526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 436","termid":"PBO:0081526"}


id: GO:0045571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of imaginal disc growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of imaginal disc growth","termid":"GO:0045570"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"negatively_regulates","term_name":"imaginal disc growth","termid":"GO:0007446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of imaginal disc growth","synonyms":[{"name":"down regulation of imaginal disc growth","type":"exact"},{"name":"down-regulation of imaginal disc growth","type":"exact"},{"name":"downregulation of imaginal disc growth","type":"exact"},{"name":"inhibition of imaginal disc growth","type":"narrow"}],"termid":"GO:0045571"}


id: FYPO:0003862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of oxidation of one or more specific proteins, or of specific protein sites, is increased, resulting in the accumulation of proteins with oxidative modifications including carbonylated proteins, in cells in a population in stationary phase.","definition_xrefs":["PomBase:mah","PMID:17986764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein oxidation","termid":"FYPO:0003863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased protein oxidation in stationary phase","synonyms":[{"name":"accumulation of carbonylated proteins in stationary phase","type":"related"},{"name":"increased level of disulfides in stationary phase","type":"related"},{"name":"increased level of oxidised thiols in proteins in stationary phase","type":"related"},{"name":"increased level of oxidized protein thiols in stationary phase","type":"related"}],"termid":"FYPO:0003862"}


id: MONDO:0019951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rigid spine syndrome (RSS) is a slowly progressive childhood-onset congenital muscular dystrophy characterized by contractures of the spinal extensor muscles associated with abnormal posture (limitation of neck and trunk flexure), progressive scoliosis of the spine, early marked cervico-axial muscle weakness with relatively preserved strength and function of the extremities and progressive respiratory insufficiency.","definition_xrefs":["Orphanet:97244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of desmin","termid":"MONDO:0016187"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of selenoprotein N1","termid":"MONDO:0016197"},{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"rigid spine syndrome","secondary_identifiers":["GARD:4723","MESH:C535683","icd11.foundation:801727141"],"synonyms":[{"name":"desmin-related myopathies with Mallory bodies","type":"related"},{"name":"muscular dystrophy, congenital, merosin positive with early spine rigidity","type":"related"},{"name":"rigid spine congenital muscular dystrophy","type":"exact"},{"name":"rigid spine muscular dystrophy-1","type":"related"}],"termid":"MONDO:0019951","xrefs":{"Monarch":{"xref_id":"0019951"}}}


id: GO:0048942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a glial cell in the posterior lateral line nerve are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a glial cell in the posterior lateral line nerve.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048938"},{"relation_name":"part_of","term_name":"posterior lateral line nerve glial cell development","termid":"GO:0048941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048942"}


id: PBO:0068616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 68, pseudogene","termid":"PBO:0068616"}


id: PBO:0048255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-3-O-sulfotransferase 3","termid":"PBO:0048255"}


id: GO:0030345
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of tooth enamel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent conferring compression resistance","termid":"GO:0030021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of tooth enamel","termid":"GO:0030345"}


id: PBO:0113253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pantothenate kinase, ATP:D-pantothenate 4'-phosphotransferase; cytoplasmic enzyme that catalyzes the first committed step in the universal biosynthetic pathway for coenzyme A (CoA) synthesis; transcription is regulated by Upc2p via a sterol response element; overexpressed human homologs, PANK1 and PANK3, complement yeast hypomorphic alleles, while PANK2, a gene implicated in pantothenate-kinase associated neurodegeneration, partially complements after the mitochondrial transit peptide is removed","termid":"PBO:0113253"}


id: PBO:0039973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 4","termid":"PBO:0039973"}


id: MONDO:0022937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness conductive stapedial ear malformation facial palsy","termid":"MONDO:0022937","xrefs":{"Monarch":{"xref_id":"0022937"}}}


id: GO:0160167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multi-enzyme complex that catalyzes the oxidative decarboxylation of 2-oxoadipate to glutaryl-CoA, thereby acting in the final step of lysine and tryptophan catabolism in mitochondria. The complex comprises multiple copies of three enzymes referred to as E1, E2 and E3: 2-oxoadipate dehydrogenase (E1), dihydrolipoamide S-succinyltransferase (E2) and dihydrolipoamide dehydrogenase (E3).","definition_xrefs":["PMID:29191460","PMID:32695416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoacid dehydrogenase complex","termid":"GO:0045240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"oxoadipate dehydrogenase complex","synonyms":[{"name":"OADHC","type":"exact"}],"termid":"GO:0160167"}


id: GO:0036216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stem cell factor (SCF) stimulus.","definition_xrefs":["GOC:uh","PMID:7520444","PMID:18787413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stem cell factor","termid":"GO:0036215"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to stem cell factor stimulus","synonyms":[{"name":"cellular response to KIT ligand","type":"exact"},{"name":"cellular response to KITLG","type":"exact"},{"name":"cellular response to SCF","type":"exact"},{"name":"cellular response to hematopoietic growth factor KL","type":"exact"}],"termid":"GO:0036216"}


id: PBO:0041276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 3","termid":"PBO:0041276"}


id: PBO:0075934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST20 antisense RNA 1","termid":"PBO:0075934"}


id: PBO:0062174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 17","termid":"PBO:0062174"}


id: MONDO:0008083
data:
  {"annotated_genes":["SJAG_03052","SJAG_02518"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86232,86233],"is_not":false,"summary":null,"term":"MONDO:0008083"}]},"cv_name":"mondo","definition":"A condition associated with mutation(s) in the DNAJC5 gene, encoding dnaJ homolog subfamily C member 5. The condition is one of a group of genetically heterogeneous neurodegenerative disorders, characterized by accumulation of intracellular lipopigments.","definition_xrefs":["NCIT:C128116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult neuronal ceroid lipofuscinosis","termid":"MONDO:0019260"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02518":null,"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0005559","MONDO:0002039","MONDO:0002561"],"is_obsolete":false,"name":"ceroid lipofuscinosis, neuronal, 4 (Kufs type)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1834207","MEDGEN:320287","GARD:1222","DOID:0110720","Orphanet:228343","OMIM:162350"],"synonyms":[{"name":"CLN4","type":"exact"},{"name":"CLN4B","type":"related"},{"name":"CLN4B disease","type":"exact"},{"name":"Kuf's disease type B","type":"related"},{"name":"Kuf's disease, autosomal dominant","type":"related"},{"name":"Kufs disease, autosomal dominant","type":"related"},{"name":"adult neuronal ceroid lipofuscinosis 4B","type":"related"},{"name":"autosomal dominant Kufs disease","type":"exact"},{"name":"autosomal dominant neuronal ceroid lipofuscinosis 4B","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 4 (Kufs type)","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 4 (Kufs type), autosomal dominant","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 4B, autosomal dominant","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, parry type","type":"related"},{"name":"neuronal ceroid lipofuscinosis 4 parry type","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 4B","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 4B","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, parry type","type":"exact"}],"termid":"MONDO:0008083","terms_by_termid":{"MONDO:0008083":null},"xrefs":{"Monarch":{"xref_id":"0008083"}}}


id: MONDO:0000961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm located within the lumen of a bronchus. It is predominantly found in males and usually originates within the fatty tissue between bronchial cartilage. May cause irreversible pulmonary damage distally. Two-thirds of the tumors occur on the right side and most are located on the first three subdivisions of the tracheobronchial tree.","definition_xrefs":["NCIT:C5063"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lung benign neoplasm","termid":"MONDO:0002732"},{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"bronchial neoplasm","termid":"MONDO:0002807"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign soft tissue neoplasm","termid":"MONDO:0044335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endobronchial lipoma","secondary_identifiers":["DOID:10183","MEDGEN:208874","UMLS:C0852937"],"synonyms":[{"name":"endobronchial lipoma","type":"exact"}],"termid":"MONDO:0000961","xrefs":{"Monarch":{"xref_id":"0000961"}}}


id: GO:0120502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (omega-1)-ethyl fatty acid + O2 + reduced [NADPH--hemoprotein reductase] = an (omega-1)-hydroxy fatty acid + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:44548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"fatty acid omega-1 hydroxylase activity","termid":"GO:0120502"}


id: GO:0001662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An acute behavioral change resulting from a perceived external threat.","definition_xrefs":["GOC:dph","PMID:9920659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral defense response","termid":"GO:0002209"},{"relation_name":"is_a","term_name":"fear response","termid":"GO:0042596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral fear response","synonyms":[{"name":"behavioural fear response","type":"exact"}],"termid":"GO:0001662"}


id: PBO:0003836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR36","termid":"PBO:0003836"}


id: MONDO:1011096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alkaptonuria that occurs in crab-eating macaque.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaptonuria, non-human animal","termid":"MONDO:1010270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaptonuria, crab-eating macaque","secondary_identifiers":["OMIA:001243-9541"],"termid":"MONDO:1011096","xrefs":{"Monarch":{"xref_id":"1011096"}}}


id: PBO:0047517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculation and elongation protein zeta 2","termid":"PBO:0047517"}


id: MONDO:0020452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the inferior vena cava","termid":"MONDO:0019830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inferior vena cava interruption","secondary_identifiers":["SCTID:93031005","UMLS:C5680291","ICD9:747.49","GARD:19664","Orphanet:99123","MEDGEN:1806633"],"synonyms":[{"name":"IVC interruption","type":"exact"},{"name":"Inferior caval vein interruption","type":"exact"}],"termid":"MONDO:0020452","xrefs":{"Monarch":{"xref_id":"0020452"}}}


id: PBO:0038963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenomedullin 2","termid":"PBO:0038963"}


id: GO:2000466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glycogen (starch) synthase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of glycogen (starch) synthase activity","termid":"GO:2000465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycogen (starch) synthase activity","synonyms":[{"name":"negative regulation of UDP-glucose-glycogen glucosyltransferase activity","type":"exact"},{"name":"negative regulation of UDP-glucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"negative regulation of UDP-glycogen synthase activity","type":"exact"},{"name":"negative regulation of UDPG-glycogen synthetase activity","type":"exact"},{"name":"negative regulation of UDPG-glycogen transglucosylase activity","type":"exact"},{"name":"negative regulation of UDPglucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"negative regulation of glycogen (starch) synthetase activity","type":"exact"},{"name":"negative regulation of uridine diphosphoglucose-glycogen glucosyltransferase activity","type":"exact"}],"termid":"GO:2000466"}


id: FYPO:0008087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the nucleus during nitrogen starvation is decreased.","definition_xrefs":["PMID:37191320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleophagy","termid":"FYPO:0008085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased nucleophagy during nitrogen starvation","termid":"FYPO:0008087"}


id: MONDO:0030035
data:
  {"annotated_genes":["SJAG_00690","SJAG_01942"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85205,85206],"is_not":false,"summary":null,"term":"MONDO:0030035"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy, developmental delay, and episodic neurologic regression syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5394367","OMIM:618877","MEDGEN:1719567"],"synonyms":[{"name":"LEUDEN","type":"exact"},{"name":"LEUKOENCEPHALOPATHY, DEVELOPMENTAL DELAY, AND EPISODIC NEUROLOGIC REGRESSION SYNDROME","type":"exact"},{"name":"Leuden Syndrome","type":"exact"},{"name":"leukoencephalopathy, developmental delay, and episodic neurologic regression syndrome","type":"exact"}],"termid":"MONDO:0030035","terms_by_termid":{"MONDO:0030035":null},"xrefs":{"Monarch":{"xref_id":"0030035"}}}


id: PBO:0049081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 137","termid":"PBO:0049081"}


id: GO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A nucleolar fragmentation process that gives rise to multiple rounded structures and that occurs in conjunction with increasing age in dividing cells.","definition_xrefs":["PMID:9891807","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar fragmentation involved in replicative aging (obsolete GO:0001303)","synonyms":[{"name":"nucleolar fragmentation during replicative ageing","type":"related"},{"name":"nucleolar fragmentation during replicative aging","type":"related"}],"termid":"GO:0001303"}


id: MONDO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine exophthalmos","termid":"MONDO:0001509"},{"relation_name":"is_a","term_name":"facial paralysis","termid":"MONDO:0001835"},{"relation_name":"is_a","term_name":"ophthalmoplegia","termid":"MONDO:0003425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exophthalmic ophthalmoplegia","secondary_identifiers":["UMLS:C0152135","DOID:13135","ICD9:376.22","MEDGEN:508900","SCTID:69763009"],"termid":"MONDO:0001643","xrefs":{"Monarch":{"xref_id":"0001643"}}}


id: SO:0001646
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genetic marker, discovered using Diversity Arrays Technology (DArT) technology.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic_marker","termid":"SO:0001645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DArT_marker","synonyms":[{"name":"DArT marker","type":"exact"}],"termid":"SO:0001646"}


id: PBO:0045798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin 2","termid":"PBO:0045798"}


id: GO:0103102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 8-methylthiooctylhydroximate = H+ + 7-methylthioheptyldesulfoglucosinolate + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:8-methylthiooctylhydroximate S-glucosyltransferase activity (obsolete GO:0103102)","termid":"GO:0103102"}


id: MONDO:0011108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Stüve-Wiedemann syndrome (obsolete MONDO:0011108)","termid":"MONDO:0011108","xrefs":{"Monarch":{"xref_id":"0011108"}}}


id: GO:0044786
data:
  {"annotated_genes":["SJAG_02690","SJAG_01823","SJAG_04877","SJAG_03843","SJAG_03451","SJAG_01068","SJAG_02199","SJAG_00618","SJAG_02162","SJAG_02607","SJAG_00857","SJAG_01410","SJAG_00536","SJAG_04816","SJAG_01076","SJAG_04210","SJAG_04995","SJAG_02074","SJAG_01762","SJAG_00364","SJAG_00327","SJAG_00728","SJAG_02667","SJAG_01832","SJAG_03927","SJAG_03695","SJAG_01010","SJAG_03722","SJAG_00198","SJAG_04272","SJAG_02294","SJAG_01221","SJAG_02182","SJAG_00729","SJAG_00696","SJAG_03898","SJAG_01374","SJAG_01884","SJAG_05232","SJAG_04190","SJAG_03525","SJAG_04150","SJAG_01677","SJAG_00814","SJAG_00272","SJAG_00874","SJAG_02348","SJAG_05197","SJAG_03495","SJAG_02198","SJAG_02992","SJAG_00399","SJAG_03855","SJAG_03780","SJAG_02610","SJAG_02039","SJAG_02818","SJAG_05180","SJAG_04183","SJAG_02172","SJAG_02822","SJAG_03048","SJAG_04879","SJAG_00247","SJAG_04341","SJAG_02908","SJAG_02439","SJAG_01210","SJAG_00863","SJAG_00884","SJAG_06022","SJAG_03438","SJAG_05239","SJAG_01644","SJAG_00573","SJAG_03720","SJAG_04671","SJAG_00400","SJAG_03160","SJAG_01354","SJAG_02079"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112531,96948],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902298"},{"annotations":[115197,107143,109734,113355],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[112308,113357,115199,70097,109737,112067],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902983"},{"annotations":[103114],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[79050,94344,99162,70709,110353,115201,106226,117133,111180,74418,74692,99225,107146,73078,107042,91757,112947],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902975"},{"annotations":[117981,95029,104735,102621,104020,108903],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903459"},{"annotations":[93759,95030,89362,106784,104736,107147,95061,104021],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903460"},{"annotations":[108919,111551],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990505"},{"annotations":[57363,71858,77994],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902977"},{"annotations":[103116,114815,110355],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902985"},{"annotations":[95969,94620,107550,98045,108875,107526,109349,63930,90744,98749,112310,94863,116598,88955,95804],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990426"},{"annotations":[116643],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903464"},{"annotations":[102164,97569,108689],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[102750],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902315"},{"annotations":[99086,111344,89374,104122,97917,111694,116046,107632,104220,112619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033260"},{"annotations":[94849,100448,103946,101301,72146,92450,100414],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"},{"annotations":[117073,111830,103117],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[116025,106420,102170,88848],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904514"},{"annotations":[102174],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903465"},{"annotations":[58302,65892,57173,61202,62570,60963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006279"},{"annotations":[88091,102742,103947,112311],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903469"}]},"cv_name":"biological_process","definition":"The DNA-dependent DNA replication that takes place as part of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"},{"relation_name":"is_a","term_name":"cell cycle 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cycle DNA replication","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0044786","terms_by_termid":{"GO:0006279":null,"GO:0033260":null,"GO:0140529":null,"GO:0140530":null,"GO:1902298":null,"GO:1902315":null,"GO:1902975":null,"GO:1902977":null,"GO:1902983":null,"GO:1902985":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null,"GO:1903464":null,"GO:1903465":null,"GO:1903467":null,"GO:1903468":null,"GO:1903469":null,"GO:1904514":null,"GO:1990426":null,"GO:1990505":null}}


id: SO:0000583
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of a transcript that will be edited.","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre_edited_region","synonyms":[{"name":"pre edited region","type":"exact"},{"name":"pre-edited region","type":"exact"}],"termid":"SO:0000583"}


id: GO:0034556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: o-nitrobenzoate + NADPH + H+ = o-hydroxylaminobenzoate + NADP+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrobenzoate nitroreductase activity (obsolete GO:0034556)","termid":"GO:0034556"}


id: GO:0097269
data:
  {"annotated_genes":["SJAG_01865","SJAG_04568"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119164,119165],"is_not":false,"summary":null,"term":"GO:0097269"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 7 isopentenyl diphosphate + (2E,6E)-farnesyl diphosphate = all-trans-decaprenyl diphosphate + 7 diphosphate.","definition_xrefs":["RHEA:27802","PMID:16262699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01865":null,"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"all-trans-decaprenyl-diphosphate synthase activity","references_by_uniquename":{"PMID:29191091":null},"secondary_identifiers":["EC:2.5.1.91","Reactome:R-HSA-2162253"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate:isopentenyl-diphosphate farnesyltranstransferase activity","type":"exact"},{"name":"2-trans,6-trans-farnesyl diphosphate activity","type":"exact"},{"name":"decaprenyl pyrophosphate synthetase activity","type":"broad"},{"name":"decaprenyl-diphosphate synthase activity","type":"broad"},{"name":"polyprenylpyrophosphate synthetase activity","type":"broad"},{"name":"terpenoidallyltransferase activity","type":"broad"},{"name":"terpenyl pyrophosphate synthetase activity","type":"broad"},{"name":"trans-prenyltransferase activity","type":"broad"}],"termid":"GO:0097269","terms_by_termid":{"GO:0006743":null,"GO:0006744":null,"GO:0097269":null}}


id: PBO:0000171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh2 (predicted)","termid":"PBO:0000171"}


id: PBO:0027337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0027337"}


id: FYPO:0003081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which genetic imprinting at the mating-type locus occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased genetic imprinting at mating-type locus","synonyms":[{"name":"decreased genetic imprinting at mating-type locus during mitotic cell cycle","type":"related"},{"name":"decreased genetic imprinting at mating-type locus during vegetative growth","type":"exact"},{"name":"reduced genetic imprinting at mating-type locus","type":"exact"}],"termid":"FYPO:0003081"}


id: PBO:0066064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association (RalGDS/AF-6) and pleckstrin homology domains 1","termid":"PBO:0066064"}


id: GO:1901857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular respiration.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:23150719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"positively_regulates","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular respiration","synonyms":[{"name":"activation of cellular respiration","type":"narrow"},{"name":"activation of oxidative metabolic process","type":"exact"},{"name":"activation of oxidative metabolism","type":"exact"},{"name":"activation of respiration","type":"broad"},{"name":"positive regulation of oxidative metabolic process","type":"exact"},{"name":"positive regulation of oxidative metabolism","type":"exact"},{"name":"positive regulation of respiration","type":"broad"},{"name":"up regulation of cellular respiration","type":"exact"},{"name":"up regulation of oxidative metabolic process","type":"exact"},{"name":"up regulation of oxidative metabolism","type":"exact"},{"name":"up regulation of respiration","type":"broad"},{"name":"up-regulation of cellular respiration","type":"exact"},{"name":"up-regulation of oxidative metabolic process","type":"exact"},{"name":"up-regulation of oxidative metabolism","type":"exact"},{"name":"up-regulation of respiration","type":"broad"},{"name":"upregulation of cellular respiration","type":"exact"},{"name":"upregulation of oxidative metabolic process","type":"exact"},{"name":"upregulation of oxidative metabolism","type":"exact"},{"name":"upregulation of respiration","type":"broad"}],"termid":"GO:1901857"}


id: PATO:0001199
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being narrow, with the two opposite margins parallel.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear","termid":"PATO:0001199"}


id: GO:2000539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein geranylgeranylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein geranylgeranylation","termid":"GO:0018344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein geranylgeranylation","synonyms":[{"name":"regulation of C-terminal protein geranylgeranylation","type":"related"},{"name":"regulation of protein amino acid geranylgeranylation","type":"exact"}],"termid":"GO:2000539"}


id: GO:0035476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of angioblasts, cells involved in blood vessel morphogenesis.","definition_xrefs":["GOC:dgh","PMID:19815777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angioblast cell migration","termid":"GO:0035476"}


id: GO:0042279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NH3 + 2 H2O + 6 ferricytochrome c = nitrite + 6 ferrocytochrome c + 7 H+.","definition_xrefs":["EC:1.7.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"},{"relation_name":"is_a","term_name":"nitrite reductase activity","termid":"GO:0098809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitrite reductase (cytochrome, ammonia-forming) activity","secondary_identifiers":["Wikipedia:Cytochrome_c_nitrite_reductase","MetaCyc:1.7.2.2-RXN","RHEA:13089"],"synonyms":[{"name":"ammonia:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"cytochrome c nitrite reductase activity","type":"exact"},{"name":"cytochrome c552 activity","type":"narrow"},{"name":"multiheme nitrite reductase activity","type":"exact"},{"name":"nitrite reductase (cytochrome; ammonia-forming)","type":"related"}],"termid":"GO:0042279"}


id: GO:1905569
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93854],"is_not":false,"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ferrichrome biosynthetic process.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:654321","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of siderophore biosynthetic process","termid":"GO:1900705"},{"relation_name":"is_a","term_name":"regulation of ferrichrome biosynthetic process","termid":"GO:1905568"},{"relation_name":"negatively_regulates","term_name":"ferrichrome biosynthetic process","termid":"GO:0031169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of ferrichrome biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of ferrichrome anabolism","type":"exact"},{"name":"down regulation of ferrichrome biosynthesis","type":"exact"},{"name":"down regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"down regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"down regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"down regulation of ferrichrome formation","type":"exact"},{"name":"down regulation of ferrichrome synthesis","type":"exact"},{"name":"down-regulation of ferrichrome anabolism","type":"exact"},{"name":"down-regulation of ferrichrome biosynthesis","type":"exact"},{"name":"down-regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"down-regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"down-regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"down-regulation of ferrichrome formation","type":"exact"},{"name":"down-regulation of ferrichrome synthesis","type":"exact"},{"name":"downregulation of ferrichrome anabolism","type":"exact"},{"name":"downregulation of ferrichrome biosynthesis","type":"exact"},{"name":"downregulation of ferrichrome biosynthetic process","type":"exact"},{"name":"downregulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"downregulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"downregulation of ferrichrome formation","type":"exact"},{"name":"downregulation of ferrichrome synthesis","type":"exact"},{"name":"inhibition of ferrichrome anabolism","type":"narrow"},{"name":"inhibition of ferrichrome biosynthesis","type":"narrow"},{"name":"inhibition of ferrichrome biosynthetic process","type":"narrow"},{"name":"inhibition of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"inhibition of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"inhibition of ferrichrome formation","type":"narrow"},{"name":"inhibition of ferrichrome synthesis","type":"narrow"},{"name":"negative regulation of ferrichrome anabolism","type":"exact"},{"name":"negative regulation of ferrichrome biosynthesis","type":"exact"},{"name":"negative regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"negative regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"negative regulation of ferrichrome formation","type":"exact"},{"name":"negative regulation of ferrichrome synthesis","type":"exact"}],"termid":"GO:1905569","terms_by_termid":{"GO:1905569":null}}


id: MONDO:1011202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited disorder affecting the structure, composition, and quantity of tooth enamel in dogs due to a variation in the ENAM gene.","definition_xrefs":["PMID:30877375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta, non-human animal","termid":"MONDO:1012952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, ENAM-related, dog","secondary_identifiers":["OMIA:001805-9615"],"termid":"MONDO:1011202","xrefs":{"Monarch":{"xref_id":"1011202"}}}


id: MONDO:0018186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Aberrant chromosomes with no ends, i.e., circular.","definition_xrefs":["MESH:D012303"],"gene_count":0,"genotype_count":0,"name":"obsolete ring chromosome (obsolete MONDO:0018186)","secondary_identifiers":["Orphanet:363203"],"synonyms":[{"name":"supernumerary circular chromosome","type":"broad"}],"termid":"MONDO:0018186","xrefs":{"Monarch":{"xref_id":"0018186"}}}


id: MONDO:1010588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, cattle","secondary_identifiers":["OMIA:000424-9913"],"termid":"MONDO:1010588","xrefs":{"Monarch":{"xref_id":"1010588"}}}


id: PBO:0052424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIRREL3 antisense RNA 3","termid":"PBO:0052424"}


id: PATO:0002504
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterodorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterodorsal orientation","synonyms":[{"name":"posterodorsally directed","type":"exact"}],"termid":"PATO:0002504"}


id: PBO:0052434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLC1 antisense RNA 1","termid":"PBO:0052434"}


id: MONDO:0012288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iridogoniodysgenesis and skeletal anomalies","secondary_identifiers":["MEDGEN:373009","OMIM:609515","UMLS:C1836074","MESH:C535534"],"synonyms":[{"name":"iridogoniodysgenesis and skeletal anomalies","type":"exact"}],"termid":"MONDO:0012288","xrefs":{"Monarch":{"xref_id":"0012288"}}}


id: PATO:0000061
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000061 relative pattern (obsolete PATO:0000061)","termid":"PATO:0000061"}


id: PBO:0055620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3059","termid":"PBO:0055620"}


id: PBO:0090954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Rsd1","termid":"PBO:0090954"}


id: PBO:0072932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 12","termid":"PBO:0072932"}


id: PBO:0056516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase domain containing 2","termid":"PBO:0056516"}


id: PBO:0002907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family helicase Swr1","termid":"PBO:0002907"}


id: GO:0032434
data:
  {"annotated_genes":["SJAG_02485","SJAG_00642","SJAG_00052","SJAG_00475","SJAG_02723","SJAG_03699","SJAG_03048","SJAG_00071","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114421],"is_not":false,"summary":null,"term":"GO:0032434"},{"annotations":[102156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[77054,106750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[88733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[102178,108690,106457,111506,116867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal protein catabolic process","termid":"GO:0061136"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000058"},{"relation_name":"regulates","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_01210":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032434","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:1905785":null,"GO:1905786":null}}


id: PBO:0078240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 21-1 (pseudogene)","termid":"PBO:0078240"}


id: PBO:0079787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A8","termid":"PBO:0079787"}


id: GO:0075282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of uredinium development, a process that leads to the formation of a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of uredinium development","termid":"GO:0075280"},{"relation_name":"negatively_regulates","term_name":"uredinium development","termid":"GO:0075279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of uredinium development","termid":"GO:0075282"}


id: GO:0000506
data:
  {"annotated_genes":["SJAG_06383","SJAG_03066","SJAG_02804","SJAG_04119","SJAG_02913","SJAG_04881"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58342,70630,77312,92792,92883,108380],"is_not":false,"summary":null,"term":"GO:0000506"}]},"cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the transfer of GlcNAc from UDP-GlcNAc to an acceptor phosphatidylinositol, the first step in the production of GPI anchors for cell surface proteins. The complex contains PIG-A, PIG-C, PIG-H, PIG-Q, PIG-P, and DPM2 in human, and Eri1p, Gpi1p, Gpi2p, Gpi15p, Gpi19p, and Spt14p in budding yeast.","definition_xrefs":["GOC:rb","PMID:15163411","GOC:kp","PMID:10944123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_04119":null,"SJAG_04881":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0032991","GO:0005783","GO:0005789","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GPI-GlcNAc transferase complex","type":"exact"},{"name":"GPI-GnT complex","type":"exact"},{"name":"GPI-N-acetylglucosaminyltransferase complex","type":"exact"}],"termid":"GO:0000506","terms_by_termid":{"GO:0000506":null}}


id: MONDO:0023961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visceral neuropathy, familial","secondary_identifiers":["OMIMPS:243180","UMLS:C0266834","MEDGEN:540202"],"termid":"MONDO:0023961","xrefs":{"Monarch":{"xref_id":"0023961"}}}


id: PBO:0110973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4504 family protein, human C1orf74 ortholog, implicated in transcription or signalling, possibly phosphate starvation response","termid":"PBO:0110973"}


id: MONDO:0011138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any systemic lupus erythematosus in which the cause of the disease is a mutation in the TLR5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 1","secondary_identifiers":["OMIM:601744","UMLS:C1866373","MEDGEN:355700"],"synonyms":[{"name":"SLEB1","type":"exact"},{"name":"TLR5 systemic lupus erythematosus (disease)","type":"exact"},{"name":"susceptibility to systemic lupus erythematosus 1","type":"exact"},{"name":"systemic lupus erythematosus (disease) caused by mutation in TLR5","type":"exact"},{"name":"systemic lupus erythematosus, resistance to","type":"exact"},{"name":"systemic lupus erythematosus, resistance to, 1","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 1","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0011138","xrefs":{"Monarch":{"xref_id":"0011138"}}}


id: MONDO:0015149
data:
  {"annotated_genes":["SJAG_00199","SJAG_04506","SJAG_01848","SJAG_04325","SJAG_05289","SJAG_04292"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011489"},{"annotations":[84981,84982,84980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012256"},{"annotations":[86558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012928"},{"annotations":[85427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014282"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_01848":null,"SJAG_04292":null,"SJAG_04325":null,"SJAG_04506":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"pure hereditary spastic paraplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:230260007","NANDO:1200053","Orphanet:102012","GARD:19822","MEDGEN:581445","UMLS:C0393555"],"synonyms":[{"name":"Pure HSP","type":"exact"},{"name":"Pure SPG","type":"exact"},{"name":"Pure familial spastic paraplegia","type":"exact"},{"name":"uncomplicated HSP","type":"exact"},{"name":"uncomplicated SPG","type":"exact"},{"name":"uncomplicated familial spastic paraplegia","type":"exact"},{"name":"uncomplicated hereditary spastic paraplegia","type":"exact"}],"termid":"MONDO:0015149","terms_by_termid":{"MONDO:0011489":null,"MONDO:0012256":null,"MONDO:0012928":null,"MONDO:0014282":null},"xrefs":{"Monarch":{"xref_id":"0015149"}}}


id: MONDO:0975756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive angioendotheliomatosis","secondary_identifiers":["Orphanet:673574","UMLS:C2930870","MEDGEN:418935"],"termid":"MONDO:0975756","xrefs":{"Monarch":{"xref_id":"0975756"}}}


id: MONDO:1010134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pityriasis rosea that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pityriasis rosea, non-human animal","secondary_identifiers":["OMIA:000801"],"termid":"MONDO:1010134","xrefs":{"Monarch":{"xref_id":"1010134"}}}


id: PBO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic delta subunit","termid":"PBO:0043085"}


id: PBO:0056851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal glutathione S-transferase 3","termid":"PBO:0056851"}


id: MONDO:0019817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral malformation","termid":"MONDO:0016582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital mitral valve insufficiency and/or stenosis","secondary_identifiers":["ICD10CM:Q23","MEDGEN:1842574","Orphanet:95464","UMLS:C5681577","GARD:19266"],"termid":"MONDO:0019817","xrefs":{"Monarch":{"xref_id":"0019817"}}}


id: MONDO:0005692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cat scratch disease is an infectious illness caused by the bacteria bartonella (Bartonella henselae). It is believed to be transmitted by cat scratches, bites, or exposure to cat saliva. This self-limiting infectious diseaseis characterized by a bump or blister at the site of the bite or scratch and swelling and pain in the lymph nodes. Other features may include fatigue, headache, achiness, and fever. Although cat-scratch disease usually subsides without treatment, antibiotic and/or antimicrobial therapy may help speed recovery.","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"},{"relation_name":"is_a","term_name":"bartonellosis","termid":"MONDO:0005664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cat-scratch disease","secondary_identifiers":["SCTID:79974007","UMLS:C0007361","ICD10CM:A28.1","EFO:0007195","DOID:11258","Orphanet:50839","MedDRA:10007729","ICD9:078.3","NCIT:C84620","MEDGEN:2861","MESH:D002372","icd11.foundation:2003001085","GARD:27"],"synonyms":[{"name":"Cat scratch disease","type":"related"},{"name":"Cat-scratch fever","type":"exact"},{"name":"Foshay-Mollaret Cat scratch fever","type":"exact"},{"name":"bartonellosis due to Bartonella henselae infection","type":"exact"},{"name":"benign lymphoreticulosis","type":"exact"},{"name":"cat scratch fever","type":"exact"},{"name":"debre's syndrome","type":"exact"},{"name":"debre-Mollaret syndrome","type":"exact"}],"termid":"MONDO:0005692","xrefs":{"Monarch":{"xref_id":"0005692"}}}


id: PBO:0038764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3 pseudogene 1","termid":"PBO:0038764"}


id: PBO:0048237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 6","termid":"PBO:0048237"}


id: GO:0002575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a basophil in response to an external stimulus.","definition_xrefs":["GOC:add","PMID:11292027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte chemotaxis","termid":"GO:0071621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil chemotaxis","termid":"GO:0002575"}


id: SO:0000634
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that encodes multiple proteins from at least two non-overlapping regions.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"polycistronic","termid":"SO:0000880"},{"relation_name":"is_a","term_name":"polycistronic_transcript","termid":"SO:0000078"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic_mRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Polycistronic_mRNA"],"synonyms":[{"name":"polycistronic mRNA","type":"exact"},{"name":"polycistronic processed transcript","type":"related"}],"termid":"SO:0000634"}


id: GO:1905044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GOC:rph","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:22393241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"}


id: MONDO:0024550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any frontometaphyseal dysplasia in which the cause of the disease is a mutation in the FLNA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontometaphyseal dysplasia","termid":"MONDO:0015942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontometaphyseal dysplasia 1","secondary_identifiers":["OMIM:305620","GARD:15293","UMLS:C4281559","DOID:0111786","MEDGEN:923943"],"synonyms":[{"name":"FLNA frontometaphyseal dysplasia","type":"exact"},{"name":"FMD1","type":"related"},{"name":"FRONTOMETAPHYSEAL dysplasia 1","type":"related"},{"name":"Fmd","type":"related"},{"name":"frontometaphyseal dysplasia 1, X-linked recessive","type":"exact"},{"name":"frontometaphyseal dysplasia caused by mutation in FLNA","type":"exact"}],"termid":"MONDO:0024550","xrefs":{"Monarch":{"xref_id":"0024550"}}}


id: PBO:0068776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 13, pseudogene","termid":"PBO:0068776"}


id: MOD:00969
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAM-Cys vs PAM-Cys","termid":"MOD:00969"}


id: GO:0034186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to apolipoprotein A-I.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apolipoprotein binding","termid":"GO:0034185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"apolipoprotein A-I binding","termid":"GO:0034186"}


id: PBO:0065478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD14 divergent transcript","termid":"PBO:0065478"}


id: GO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving globosides, globotetraosylceramides, ceramides containing a core structure of GalNAc-beta-(1->3)-Gal-alpha-(1->4)-Glc(I). Globosides are the major neutral glycosphingolipid in normal kidneys and erythrocytes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"globoside metabolic process","synonyms":[{"name":"globoside metabolism","type":"exact"}],"termid":"GO:0001575"}


id: PBO:0081685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF606 antisense RNA 1","termid":"PBO:0081685"}


id: PBO:0109976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated heterodimeric guanine nucleotide exchange factor (GEF) subunit Aut12","termid":"PBO:0109976"}


id: MONDO:0005040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant, gonadal or extragonadal neoplasm that originates from germ cells. Representative examples include teratoma, seminoma, embryonal carcinoma, and yolk sac tumor.","definition_xrefs":["NCIT:C3708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell tumor","secondary_identifiers":["DOID:2994","MEDGEN:60030","UMLS:C0205851","EFO:0000514"],"synonyms":[{"name":"germ cell cancer","type":"related"},{"name":"germ cell neoplasm","type":"exact"},{"name":"germ cell tumor","type":"exact"},{"name":"germ cells tumors","type":"related"},{"name":"germ cells tumours","type":"related"},{"name":"malignant tumour of the germ cell","type":"related"},{"name":"neoplasm of germ cell","type":"exact"},{"name":"neoplasm of the germ cell","type":"exact"},{"name":"tumor of germ cell","type":"exact"},{"name":"tumor of the germ cell","type":"exact"},{"name":"tumour of germ cell","type":"exact"},{"name":"tumour of the germ cell","type":"exact"}],"termid":"MONDO:0005040","xrefs":{"Monarch":{"xref_id":"0005040"}}}


id: PBO:0074406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 11","termid":"PBO:0074406"}


id: FYPO:0003611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during one or both meiotic nuclear divisions is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during meiosis","synonyms":[{"name":"increased protein accumulation during meiosis","type":"related"},{"name":"increased protein level during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003611"}


id: PBO:0048882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 1","termid":"PBO:0048882"}


id: PBO:0063657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 2","termid":"PBO:0063657"}


id: GO:0035589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by an extracellular purine nucleotide binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:9755289","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purinergic nucleotide receptor signaling pathway","termid":"GO:0035590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled purinergic nucleotide receptor signaling pathway","synonyms":[{"name":"G-protein coupled purinergic nucleotide receptor signaling pathway","type":"exact"},{"name":"G-protein coupled purinergic nucleotide receptor signalling pathway","type":"exact"},{"name":"P2Y receptor signaling pathway","type":"exact"}],"termid":"GO:0035589"}


id: GO:0048820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a hair follicle to attain its fully functional state.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cycle process","termid":"GO:0022405"},{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"hair follicle development","termid":"GO:0001942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair follicle maturation","termid":"GO:0048820"}


id: PBO:0040340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 3","termid":"PBO:0040340"}


id: MONDO:0019793
data:
  {"annotated_genes":["SJAG_01438","SJAG_02885","SJAG_05332","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84999,84998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[86090,86089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"}]},"cv_name":"mondo","definition":"Autosomal dominant cerebellar ataxia (ACDA) type III is a group of neurodegenerative disorders characterized by mostly pure cerebellar syndromes with occasional non-cerebellar signs (e.g. pyramidal signs, peripheral neuropathy, writer's cramp) and includes spinocerebellar ataxia (SCA) type 5 (SCA5), SCA6, SCA11, SCA26, SCA30, and SCA31.","definition_xrefs":["Orphanet:94148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_01438":null,"SJAG_02885":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"autosomal dominant cerebellar ataxia type III","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842779","UMLS:C5680260","GARD:19253"],"synonyms":[{"name":"ADCA3","type":"exact"},{"name":"ADCAIII","type":"exact"},{"name":"Pure cerebellar syndrome-mild pyramidal signs syndrome","type":"exact"},{"name":"autosomal dominant cerebellar ataxia type 3","type":"exact"},{"name":"autosomal dominant cerebellar ataxia type III","type":"exact"}],"termid":"MONDO:0019793","terms_by_termid":{"MONDO:0012246":null,"MONDO:0014417":null},"xrefs":{"Monarch":{"xref_id":"0019793"}}}


id: GO:0005481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle fusion (obsolete GO:0005481)","synonyms":[{"name":"vesicle fusion","type":"exact"}],"termid":"GO:0005481"}


id: PR:P36597
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nmt1 gene.","definition_xrefs":["UniProtKB:P36597","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.02","synonyms":[{"name":"HMP-P synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nmt1","type":"exact"},{"name":"hydroxymethylpyrimidine phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"no message in thiamine protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thiamine biosynthesis protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thiamine pyrimidine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36597"}


id: MONDO:0700152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from hepatocytes that occurs in dogs.","definition_xrefs":["NCIT:C129298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma, non-human animal","termid":"MONDO:0700099"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"},{"relation_name":"is_a","term_name":"liver disorder, non-human animal","termid":"MONDO:1012967"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine hepatocellular carcinoma","termid":"MONDO:0700152","xrefs":{"Monarch":{"xref_id":"0700152"}}}


id: GO:0070944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a bacterium by a neutrophil.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"},{"relation_name":"part_of","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil-mediated killing of bacterium","synonyms":[{"name":"neutrophil mediated killing of bacterium","type":"exact"}],"termid":"GO:0070944"}


id: MONDO:0032579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"warburg-cinotti syndrome","secondary_identifiers":["UMLS:C5193019","OMIM:618175","MEDGEN:1677486"],"synonyms":[{"name":"WARBURG-CINOTTI SYNDROME","type":"related"},{"name":"WRCN","type":"related"}],"termid":"MONDO:0032579","xrefs":{"Monarch":{"xref_id":"0032579"}}}


id: GO:0021550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the medulla oblongata over time, from its formation to the mature structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GOC:dgh","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata development","synonyms":[{"name":"medulla development","type":"related"},{"name":"myelencephalon development","type":"related"}],"termid":"GO:0021550"}


id: MONDO:0034106
data:
  {"annotated_genes":["SJAG_01507"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85914],"is_not":false,"summary":null,"term":"MONDO:0034106"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01507":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 73","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17988","MEDGEN:1681654","OMIM:618379","UMLS:C5193065","DOID:0112209","Orphanet:544503"],"synonyms":[{"name":"DEE73","type":"exact"},{"name":"developmental and epileptic encephalopathy 73","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 73","type":"exact"},{"name":"rnf13-related severe early-onset epileptic encephalopathy","type":"exact"}],"termid":"MONDO:0034106","terms_by_termid":{"MONDO:0034106":null},"xrefs":{"Monarch":{"xref_id":"0034106"}}}


id: PBO:0075263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 16","termid":"PBO:0075263"}


id: GO:0043095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the activity of the enzyme GTP cyclohydrolase I.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of GTP cyclohydrolase I activity (obsolete GO:0043095)","termid":"GO:0043095"}


id: MONDO:0010884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facioscapulohumeral muscular dystrophy","termid":"MONDO:0001347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, scapulohumeral","secondary_identifiers":["GARD:15317","MESH:C562932","OMIM:600416","SCTID:240074006","UMLS:C0410192","MEDGEN:98373"],"synonyms":[{"name":"muscular dystrophy, scapulohumeral","type":"exact"}],"termid":"MONDO:0010884","xrefs":{"Monarch":{"xref_id":"0010884"}}}


id: GO:0099164
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane component of the postsynaptic specialization of a symmetric synapse. This is the region of the postsynaptic membrane in which the population of neurotransmitter receptors involved in synaptic transmission are concentrated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization membrane","termid":"GO:0099634"},{"relation_name":"part_of","term_name":"postsynaptic specialization of symmetric synapse","termid":"GO:0099629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization membrane of symmetric synapse","termid":"GO:0099164"}


id: PBO:0036171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-symmetric_mitochondrial_aggregation","termid":"PBO:0036171"}


id: GO:0060480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lung goblet cell. A goblet cell is a cell of the epithelial lining that produces and secretes mucins.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung secretory cell differentiation","termid":"GO:0061140"},{"relation_name":"part_of","term_name":"lobar bronchus epithelium development","termid":"GO:0060481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung goblet cell differentiation","synonyms":[{"name":"pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:0060480"}


id: GO:0018501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of a di- or tetrachlorinated dienol to the corresponding catechol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-chlorobenzene dihydrodiol dehydrogenase activity (obsolete GO:0018501)","termid":"GO:0018501"}


id: GO:0001690
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic dynein light chain (obsolete GO:0001690)","synonyms":[{"name":"cytoplasmic dynein light chain","type":"exact"}],"termid":"GO:0001690"}


id: GO:0090427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of meiosis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic nuclear division","termid":"GO:0045836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"activation of meiosis","termid":"GO:0090427"}


id: GO:0061619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannose into pyruvate, occurring through a fructose-6-phosphate intermediate, with the concomitant production of ATP and NADH.","definition_xrefs":["GOC:dph","ISBN:0879010479","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannose catabolic process","termid":"GO:0019309"},{"relation_name":"is_a","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091","GO:0005975","GO:0055086"],"is_obsolete":false,"name":"glycolytic process from mannose through fructose-6-phosphate","termid":"GO:0061619"}


id: PBO:0076085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid sulfatase","termid":"PBO:0076085"}


id: MONDO:0015227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic limb malformation (obsolete MONDO:0015227)","secondary_identifiers":["Orphanet:109011"],"synonyms":[{"name":"isolated limb malformation","type":"related"},{"name":"nonsyndromic limb malformation","type":"exact"}],"termid":"MONDO:0015227","xrefs":{"Monarch":{"xref_id":"0015227"}}}


id: FYPO:0003955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular metabolism phenotype observed in the vegetative growth phase of the life cycle in which triglyceride biosynthesis is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased triglyceride biosynthetic process","synonyms":[{"name":"increased TAG biosynthetic process","type":"exact"},{"name":"increased triacylglycerol biosynthesis","type":"exact"},{"name":"increased triacylglycerol biosynthetic process","type":"exact"},{"name":"increased triglyceride biosynthesis","type":"exact"},{"name":"increased triglyceride biosynthetic process during mitotic cell cycle","type":"related"},{"name":"increased triglyceride biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0003955"}


id: PBO:0049478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.2 linker histone, cluster member","termid":"PBO:0049478"}


id: GO:0033723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fluoroacetaldehyde + NAD+ + H2O = fluoroacetate + NADH + 2 H+.","definition_xrefs":["EC:1.2.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"fluoroacetaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:16677"],"synonyms":[{"name":"fluoroacetaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0033723"}


id: GO:0035148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Creation of the central hole of a tube in an anatomical structure through which gases and/or liquids flow.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"tube morphogenesis","termid":"GO:0035239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tube formation","synonyms":[{"name":"lumen formation in an anatomical structure","type":"related"},{"name":"tube lumen formation","type":"exact"}],"termid":"GO:0035148"}


id: PBO:0089083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 8, hinge protein","termid":"PBO:0089083"}


id: GO:0060378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates brood size. Brood size is the number of progeny that survive embryogenesis and are cared for at one time.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of brood size","termid":"GO:0060378"}


id: GO:2000629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA metabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of miRNA metabolic process","termid":"GO:2000628"},{"relation_name":"negatively_regulates","term_name":"miRNA metabolic process","termid":"GO:0010586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA metabolic process","synonyms":[{"name":"negative regulation of microRNA metabolic process","type":"exact"}],"termid":"GO:2000629"}


id: GO:1900673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving olefin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olefin metabolic process","synonyms":[{"name":"olefin metabolism","type":"exact"}],"termid":"GO:1900673"}


id: PBO:0042648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 23 pseudogene","termid":"PBO:0042648"}


id: SO:0001291
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N4,2'-O-dimethylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4_2_prime_O_dimethylcytidine","secondary_identifiers":["RNAMOD:083"],"synonyms":[{"name":"N4 2 prime O dimethylcytidine","type":"exact"},{"name":"N4,2'-O-dimethylcytidine","type":"exact"},{"name":"m4Cm","type":"exact"}],"termid":"SO:0001291"}


id: GO:0005976
data:
  {"annotated_genes":["SJAG_04659","SJAG_00876","SJAG_00115","SJAG_01171","SJAG_00218","SJAG_01787","SJAG_04963","SJAG_04864","SJAG_00485","SJAG_04771","SJAG_02916","SJAG_01028","SJAG_02192","SJAG_04327","SJAG_01426","SJAG_04666","SJAG_04236","SJAG_02178","SJAG_03295","SJAG_04073","SJAG_02222","SJAG_01089","SJAG_03646","SJAG_00963","SJAG_00667","SJAG_00620","SJAG_03057","SJAG_02649","SJAG_03444","SJAG_02131","SJAG_01255","SJAG_01017","SJAG_00183","SJAG_01835","SJAG_01888","SJAG_03123","SJAG_03705","SJAG_00424","SJAG_03851","SJAG_02076","SJAG_04184","SJAG_02590","SJAG_02278","SJAG_04462","SJAG_01376","SJAG_01453","SJAG_05285","SJAG_04878","SJAG_02446","SJAG_01288","SJAG_03824","SJAG_01963","SJAG_00610","SJAG_01290","SJAG_04509","SJAG_05001","SJAG_04668","SJAG_01561","SJAG_03587","SJAG_04483","SJAG_06309","SJAG_02478","SJAG_01783"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113786],"is_not":false,"summary":null,"term":"GO:0005976"},{"annotations":[63285,74944,76623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[93135,79141,100422,95042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051072"},{"annotations":[94257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[72800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[119376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030995"},{"annotations":[99949,93816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044347"},{"annotations":[70325,73176,73038,71279,78490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[115612,112954,70582,74287,91390,75578,105904,72802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[77977,102438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[107862,94895,101740,101741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[106492,72292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071966"},{"annotations":[76751,73090,70436,70269,74809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009251"},{"annotations":[103097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[79885,72319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005977"},{"annotations":[72848,71880,78569,79602,71617,73267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[78687,76983],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[58642,66894,95901,115418,95900,108192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000272"},{"annotations":[87308,92216],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[87686],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[92200,105146,117830,117705,105717,90563,102639],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[102641,92222,94732,89227],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"macromolecule metabolic 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metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:24699070":null},"secondary_identifiers":["GO:0044263"],"synonyms":[{"name":"glycan metabolic process","type":"narrow"},{"name":"glycan metabolism","type":"narrow"},{"name":"multicellular organismal polysaccharide metabolic process","type":"narrow"},{"name":"polysaccharide metabolism","type":"exact"}],"termid":"GO:0005976","terms_by_termid":{"GO:0000272":null,"GO:0005976":null,"GO:0005977":null,"GO:0005980":null,"GO:0006078":null,"GO:0009251":null,"GO:0030995":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0044347":null,"GO:0045719":null,"GO:0051072":null,"GO:0061723":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071966":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0002332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immature B cells from the bone marrow become mature B cells in the spleen. Transitional stage B cells are subdivided into transitional one (T1) and transitional two (T2) stages and are short-lived and functionally incompetent.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature B cell differentiation","termid":"GO:0002327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transitional stage B cell differentiation","synonyms":[{"name":"transitional stage B cell development","type":"related"},{"name":"transitional stage B lymphocyte differentiation","type":"exact"},{"name":"transitional stage B-cell differentiation","type":"exact"},{"name":"transitional stage B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002332"}


id: PBO:0108777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of Heat Sensitivity","termid":"PBO:0108777"}


id: MONDO:1012345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"comedo syndrome, non-human animal","termid":"MONDO:1011745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"comedo syndrome, dog","secondary_identifiers":["OMIA:001272-9615"],"termid":"MONDO:1012345","xrefs":{"Monarch":{"xref_id":"1012345"}}}


id: PR:Q92374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssb3 gene.","definition_xrefs":["UniProtKB:Q92374","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor A protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC23B6.05c","synonyms":[{"name":"Spom972h-ssb3","type":"exact"},{"name":"single-stranded DNA-binding protein P12 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92374"}


id: MONDO:0024460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Herpesviridae infections (obsolete MONDO:0024460)","termid":"MONDO:0024460","xrefs":{"Monarch":{"xref_id":"0024460"}}}


id: FYPO:0006332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is normal (i.e. the same as in wild-type cells) when the population in which the mating cells are found is in stationary phase.","definition_xrefs":["PomBase:mah","PMID:25204792","PomBase:al","PMID:28160081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mating efficiency","termid":"FYPO:0001147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal mating efficiency during stationary phase","termid":"FYPO:0006332"}


id: PBO:0090089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein, expressed during meiotic cell cycle, possibly related to metazoan RAB11FIP4 family","termid":"PBO:0090089"}


id: GO:0033019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxyvalerate + NAD+ = 5-oxovalerate + NADH.","definition_xrefs":["GOC:mlg","PMID:12406764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"5-hydroxyvalerate dehydrogenase activity","termid":"GO:0033019"}


id: PBO:0110472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX16 pseudogene 1","termid":"PBO:0110472"}


id: MONDO:0015433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 17 syndrome is a rare chromosomal anomaly syndrome, resulting from partial deletion of chromosome 17, characterized by highly variable manifestations, ranging from a severe phenotype which presents with lissencephaly and severe intellectual disability to a milder phenotype that includes short stature, microcephaly, intellectual disability, seizures (that may be pharmacoresistant), café-au-lait spots, retinal flecks and minor facial dysmorphism, depending on the presence or absence of the Miller-Dieker critical region.","definition_xrefs":["Orphanet:1441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 17 disorder","termid":"MONDO:0020583"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 17","secondary_identifiers":["UMLS:C2931714","MESH:C538046","GARD:4724","MEDGEN:419477"],"synonyms":[{"name":"R17","type":"related"},{"name":"Ring 17","type":"related"},{"name":"Ring chromosome 17 syndrome","type":"related"},{"name":"Ring chromosome type 17","type":"exact"},{"name":"chromosome 17 ring","type":"related"}],"termid":"MONDO:0015433","xrefs":{"Monarch":{"xref_id":"0015433"}}}


id: PBO:0044570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 zinc finger B","termid":"PBO:0044570"}


id: PBO:0029530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_beta-glucanase","termid":"PBO:0029530"}


id: PBO:0040951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 22","termid":"PBO:0040951"}


id: MONDO:0020689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurologic condition associated with the ACQUIRED IMMUNODEFICIENCY SYNDROME and characterized by impaired concentration and memory, slowness of hand movements, ATAXIA, incontinence, apathy, and gait difficulties associated with HIV-1 viral infection of the central nervous system. Pathologic examination of the brain reveals white matter rarefaction, perivascular infiltrates of lymphocytes, foamy macrophages, and multinucleated giant cells. (From Adams et al., Principles of Neurology, 6th ed, pp760-1; N Engl J Med, 1995 Apr 6;332(14):934-40)","definition_xrefs":["MESH:D015526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dementia","termid":"MONDO:0001627"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"AIDS dementia complex","secondary_identifiers":["NCIT:C2864","SCTID:421529006","MEDGEN:177","EFO:0002608","ICD9:294.8","UMLS:C0001849","GARD:8250"],"synonyms":[{"name":"ADC","type":"related"},{"name":"ADC - Acquired immune deficiency syndrome dementia complex","type":"related"},{"name":"AIDS - Acquired immune deficiency syndrome dementia complex","type":"related"},{"name":"AIDS Dementia","type":"related"},{"name":"AIDS Dementia Complex","type":"related"},{"name":"AIDS Encephalopathies","type":"related"},{"name":"AIDS Encephalopathy","type":"related"},{"name":"AIDS RELAT DEMENTIA COMPLEX","type":"related"},{"name":"AIDS dementia","type":"exact"},{"name":"AIDS dementia complex","type":"exact"},{"name":"AIDS related Dementia Complex","type":"related"},{"name":"AIDS related cognitive impairment","type":"related"},{"name":"AIDS with dementia (disorder)","type":"related"},{"name":"AIDS-related Dementia Complex","type":"related"},{"name":"Acquired immune deficiency syndrome dementia complex","type":"related"},{"name":"Acquired immune deficiency syndrome-related dementia","type":"related"},{"name":"Acquired-Immune Deficiency Syndrome Dementia Complex","type":"related"},{"name":"Complex, AIDS Dementia","type":"related"},{"name":"Complex, AIDS-related Dementia","type":"related"},{"name":"DEMENTIA COMPLEX ACQUIRED IMMUNE DEFIC SYNDROME","type":"related"},{"name":"DEMENTIA COMPLEX AIDS RELAT","type":"related"},{"name":"Dementia Complex, AIDS","type":"related"},{"name":"Dementia Complex, AIDS related","type":"related"},{"name":"Dementia Complex, AIDS-related","type":"related"},{"name":"Dementia Complex, Acquired Immune Deficiency Syndrome","type":"related"},{"name":"Dementia associated with AIDS","type":"related"},{"name":"Dementia associated with acquired immunodeficiency syndrome","type":"related"},{"name":"Dementia, HIV","type":"related"},{"name":"Dementias, HIV","type":"related"},{"name":"Encephalopathies, AIDS","type":"related"},{"name":"Encephalopathies, HIV","type":"related"},{"name":"Encephalopathy, AIDS","type":"related"},{"name":"Encephalopathy, HIV","type":"related"},{"name":"HIV 1 Associated Cognitive Motor Complex","type":"related"},{"name":"HIV 1 Cognitive and Motor Complex","type":"related"},{"name":"HIV ASSOC COGNITIVE MOTOR COMPLEX","type":"related"},{"name":"HIV Associated Cognitive Motor Complex","type":"related"},{"name":"HIV Dementia","type":"related"},{"name":"HIV Dementias","type":"related"},{"name":"HIV Encephalopathies","type":"related"},{"name":"HIV Encephalopathy","type":"related"},{"name":"HIV associated cognitive and motor complex","type":"related"},{"name":"HIV encephalitis","type":"related"},{"name":"HIV-1 Cognitive and Motor Complex","type":"related"},{"name":"HIV-1-Associated Cognitive Motor Complex","type":"related"},{"name":"HIV-Associated Cognitive Motor Complex","type":"related"},{"name":"HIV-associated dementia","type":"related"},{"name":"acquired immune deficiency syndrome dementia complex","type":"related"},{"name":"acquired immune deficiency syndrome-related dementia","type":"related"}],"termid":"MONDO:0020689","xrefs":{"Monarch":{"xref_id":"0020689"}}}


id: PBO:0051488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 5","termid":"PBO:0051488"}


id: GO:0042355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-fucose (6-deoxy-Lgalactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose catabolic process","termid":"GO:0019317"},{"relation_name":"is_a","term_name":"L-fucose metabolic process","termid":"GO:0042354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-fucose catabolic process","synonyms":[{"name":"L-fucose breakdown","type":"exact"},{"name":"L-fucose catabolism","type":"exact"},{"name":"L-fucose degradation","type":"exact"}],"termid":"GO:0042355"}


id: PBO:0040421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V0D1 divergent transcript","termid":"PBO:0040421"}


id: PBO:0066002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALGAPA1 pseudogene 1","termid":"PBO:0066002"}


id: MONDO:0014133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental and epileptic encephalopathy characterized by seizure onset in the first weeks or months of life, delayed or regression of psychomotor development, and hypotonia that has material basis in homozygous or compound heterozygous mutation in the TBC1D24 gene on chromosome 16p13.","definition_xrefs":["DOID:0080449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant migrating partial seizures of infancy","termid":"MONDO:0017385"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 16","secondary_identifiers":["GARD:15945","UMLS:C3809173","MEDGEN:815503","OMIM:615338"],"synonyms":[{"name":"DEE16","type":"exact"},{"name":"EIEE16","type":"exact"},{"name":"developmental and epileptic encephalopathy 16","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 16","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 16","type":"exact"}],"termid":"MONDO:0014133","xrefs":{"Monarch":{"xref_id":"0014133"}}}


id: PBO:0063535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZRN3 antisense RNA 1","termid":"PBO:0063535"}


id: MONDO:0013308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CBL-related disorder is a genetic condition caused by pathogenic variants in the Cbl ubiquitin ligase gene, (CBL; HGNC:1541). Due to the proposed mechanism indicating the CBL gene's relationship to the RAS-MAPK pathway and the phenotypic presentation similar to that of the RASopathies, CBL-related disorder should be considered a RASopathy disorder. Though there is a wide spectrum of phenotypic variability, broadly, patients with CBL-related disorder have presented with developmental delay, intellectual disability, neurodevelopmental alterations, prenatal lymphatic anomalies, cardiac malformations as well as vascular anomalies particularly affecting the brain (e.g. Moya-moya arteriopathies), craniofacial features indicative of a RASopathy, hypotonia, feeding difficulties, edema of the legs, musculoskeletal and respiratory thorax abnormalities, ectodermal features including cafe-au-lait spots, immunological and hematological disorders and susceptibility to tumors diagnosed as juvenile myelomonocytic leukemia (JMML) that is usually self-remitting. Note tumor risk beyond JMML has not yet been thoroughly assessed. Due to the clinical presentation of a broad spectrum of these and other phenotypes in patients with variants in CBL, these conditions are currently defined by experts in reference to the causal gene, CBL.","definition_xrefs":["PMID:28343148","PMID:25283271","PMID:26911351","PMID:28589114","PMID:25952305","PMID:29259247","PMID:28414188","PMID:24458550","PMID:20619386","PMID:21901340","PMID:25358541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RASopathy","termid":"MONDO:0021060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBL-related disorder","secondary_identifiers":["OMIM:613563","GARD:17577","Orphanet:363972","MEDGEN:462153","UMLS:C3150803"],"synonyms":[{"name":"CBL-related disorder","type":"exact"},{"name":"Cbl mutation-associated syndrome","type":"related"},{"name":"Cbl syndrome","type":"exact"},{"name":"NSLL","type":"related"},{"name":"Noonan syndrome-like disorder with JMML","type":"exact"},{"name":"Noonan syndrome-like disorder with juvenile myelomonocytic leukaemia","type":"exact"},{"name":"Noonan syndrome-like disorder with juvenile myelomonocytic leukemia","type":"exact"},{"name":"Noonan syndrome-like disorder with or without juvenile myelomonocytic leukaemia","type":"related"},{"name":"Noonan syndrome-like disorder with or without juvenile myelomonocytic leukemia","type":"related"},{"name":"Noonan-like syndrome","type":"exact"}],"termid":"MONDO:0013308","xrefs":{"Monarch":{"xref_id":"0013308"}}}


id: GO:0010618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to aerenchyma, parenchyma tissue containing particularly large intercellular spaces of schizogenous or lysigenous origin. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["PMID:18055613","PO:0005702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerenchyma formation","termid":"GO:0010618"}


id: PATO:0001020
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of whether the bearer has been harmed or injured or spoiled.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damage","termid":"PATO:0001020"}


id: PBO:0088315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQC complex ubiquitin-protein ligase E3 Rkr1","termid":"PBO:0088315"}


id: PBO:0050963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 4 pseudogene 1","termid":"PBO:0050963"}


id: MONDO:0010197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Freeman-Sheldon syndrome","termid":"MONDO:0008675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"whistling face syndrome, recessive form","secondary_identifiers":["GARD:10024","MEDGEN:376364","MESH:C536699","UMLS:C1848470","DOID:0111606","OMIM:277720"],"synonyms":[{"name":"whistling face syndrome, recessive form","type":"exact"}],"termid":"MONDO:0010197","xrefs":{"Monarch":{"xref_id":"0010197"}}}


id: GO:1902395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of 1-deoxy-D-xylulose-5-phosphate synthase activity.","definition_xrefs":["PMID:23612965","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity (obsolete GO:1902395)","synonyms":[{"name":"regulation of 1-deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating) activity","type":"exact"},{"name":"regulation of 1-deoxyxylulose-5-phosphate synthase activity","type":"exact"},{"name":"regulation of DOXP synthase activity","type":"exact"},{"name":"regulation of DXP-synthase activity","type":"exact"},{"name":"regulation of pyruvate:D-glyceraldehyde-3-phosphate acetaldehydetransferase (decarboxylating)","type":"exact"}],"termid":"GO:1902395"}


id: MONDO:0010849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma, Bothnian type","secondary_identifiers":["Orphanet:2337","MEDGEN:325011","OMIM:600231","DOID:0111707","GARD:1862","UMLS:C1838359"],"synonyms":[{"name":"PPKB","type":"related"},{"name":"palmoplantar keratoderma, Bothnian type","type":"exact"}],"termid":"MONDO:0010849","xrefs":{"Monarch":{"xref_id":"0010849"}}}


id: PBO:0030251
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level","termid":"PBO:0030251"}


id: PBO:0039727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4","termid":"PBO:0039727"}


id: PBO:0074821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 19","termid":"PBO:0074821"}


id: PBO:0083418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the ribosomal gene RPL7B","termid":"PBO:0083418"}


id: PBO:0079190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 19, pseudogene","termid":"PBO:0079190"}


id: GO:2001313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a UDP-4-deoxy-4-formamido-beta-L-arabinopyranose.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolic process","synonyms":[{"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolism","type":"exact"}],"termid":"GO:2001313"}


id: GO:0017005
data:
  {"annotated_genes":["SJAG_04418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79145],"is_not":false,"summary":null,"term":"GO:0017005"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of 3'-phosphotyrosyl groups formed as covalent intermediates (in DNA backbone breakage) between DNA topoisomerase I and DNA.","definition_xrefs":["PMID:10521354","PMID:16751265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosyl-DNA phosphodiesterase activity","termid":"GO:0070259"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"3'-tyrosyl-DNA phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0017005","terms_by_termid":{"GO:0017005":null}}


id: PBO:0070108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 22 pseudogene","termid":"PBO:0070108"}


id: GO:0072353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular age-dependent response to reactive oxygen species (obsolete GO:0072353)","termid":"GO:0072353"}


id: PBO:0108704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP, GTPase activating protein for Arf6, Ucp3","termid":"PBO:0108704"}


id: GO:0044000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism or its progeny spreads from one location to another within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete movement in host (obsolete GO:0044000)","synonyms":[{"name":"movement in host environment","type":"related"},{"name":"movement of symbiont in host","type":"exact"},{"name":"movement of symbiont within host","type":"exact"},{"name":"movement within host","type":"exact"},{"name":"symbiont movement in host","type":"exact"},{"name":"symbiont movement within host","type":"related"}],"termid":"GO:0044000"}


id: GO:0016465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Multisubunit protein complex with 2x7 (Type I, in most cells) or 2x8 (Type II, in Archaea) ATP-binding sites involved in maintaining an unfolded polypeptide structure before folding or to entry into mitochondria and chloroplasts.","definition_xrefs":["PMID:24816391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"chaperonin ATPase complex","termid":"GO:0016465"}


id: PR:P35551
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA 2'-O-methyltransferase fibrillarin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10335:SF0","OMA:SCHPO03507","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA 2'-O-methyltransferase fibrillarin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.10c","secondary_identifiers":["UniProtKB:P35551"],"synonyms":[{"name":"Spom972h-FBL","type":"exact"},{"name":"histone-glutamine methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P35551"}


id: GO:1903910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of receptor clustering.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:23575248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor clustering","termid":"GO:1903909"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"receptor clustering","termid":"GO:0043113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor clustering","synonyms":[{"name":"down regulation of receptor clustering","type":"exact"},{"name":"down-regulation of receptor clustering","type":"exact"},{"name":"downregulation of receptor clustering","type":"exact"},{"name":"inhibition of receptor clustering","type":"narrow"}],"termid":"GO:1903910"}


id: SO:0000867
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift caused by deleting two bases.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift","termid":"SO:0000865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_2_frameshift","synonyms":[{"name":"minus 2 frameshift","type":"exact"}],"termid":"SO:0000867"}


id: PR:O42843
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23A1.05 gene.","definition_xrefs":["UniProtKB:O42843","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C23A1.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.05","synonyms":[{"name":"Spom972h-SPAC23A1.05","type":"exact"}],"termid":"PR:O42843"}


id: FYPO:0004425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein threonine phosphorylation (obsolete FYPO:0004425)","synonyms":[{"name":"abolished peptidyl-threonine phosphorylation","type":"exact"},{"name":"protein threonine phosphorylation abolished","type":"exact"}],"termid":"FYPO:0004425"}


id: GO:0140251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein at the presynapse.","definition_xrefs":["PMID:27764673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation protein catabolic process at synapse","termid":"GO:0140250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation protein catabolic process at presynapse","termid":"GO:0140251"}


id: MONDO:0016789
data:
  {"annotated_genes":["SJAG_03660","SJAG_00839","SJAG_01924","SJAG_02006","SJAG_04192","SJAG_02107","SJAG_04495","SJAG_02369","SJAG_00461","SJAG_03247","SJAG_00605","SJAG_03064","SJAG_03290","SJAG_03310","SJAG_02009","SJAG_03553","SJAG_02158","SJAG_02796","SJAG_00866","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86860,86861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011534"},{"annotations":[84957,84958,84956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013046"},{"annotations":[87032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010392"},{"annotations":[85642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009865"},{"annotations":[85479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[85983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[86291,86292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[86444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013762"},{"annotations":[87064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[84941,84942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"},{"annotations":[85960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013877"},{"annotations":[86265,86266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[86211,86212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"},{"annotations":[86239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010717"},{"annotations":[85725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013580"},{"annotations":[86573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009502"},{"annotations":[85012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"},{"annotations":[86574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009503"},{"annotations":[86237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012120"},{"annotations":[85400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[86976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007067"},{"annotations":[85592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of pyruvate metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"inborn disorder of energy metabolism","termid":"MONDO:0019243"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_00866":null,"SJAG_01924":null,"SJAG_02006":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02158":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_03064":null,"SJAG_03247":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03553":null,"SJAG_03660":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"pyruvate metabolism disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842590","GARD:20752","Orphanet:254746","UMLS:C0268192"],"synonyms":[{"name":"inborn error of pyruvate metabolic process","type":"exact"},{"name":"inborn pyruvate metabolic process disorder","type":"exact"},{"name":"rare inborn error of pyruvate metabolic process","type":"exact"}],"termid":"MONDO:0016789","terms_by_termid":{"MONDO:0007067":null,"MONDO:0007453":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009502":null,"MONDO:0009503":null,"MONDO:0009529":null,"MONDO:0009865":null,"MONDO:0009950":null,"MONDO:0010392":null,"MONDO:0010717":null,"MONDO:0011236":null,"MONDO:0011534":null,"MONDO:0012120":null,"MONDO:0013046":null,"MONDO:0013275":null,"MONDO:0013580":null,"MONDO:0013762":null,"MONDO:0013877":null,"MONDO:0014221":null,"MONDO:0014674":null,"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0016789"}}}


id: PBO:0017792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation diffusion family zinc transmembrane transporter Cis4","termid":"PBO:0017792"}


id: PBO:0061953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 5","termid":"PBO:0061953"}


id: PBO:0073263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 7","termid":"PBO:0073263"}


id: GO:0070579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylcytosine (5mC) in DNA + 2-oxoglutarate + O2 = 5-hydroxymethylcytosine (5hmC) in DNA + succinate + CO2. This reaction is the first step in the removal of cytosine methylated on position 5 in double-stranded DNA. This activity can iteratively oxidize 5hmC to 5-formylcytosine (5fC) and to 5-carboxylcytosine (5caC).","definition_xrefs":["PMID:21496894","PMID:21778364","PMID:19372391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"5-methylcytosine dioxygenase activity","secondary_identifiers":["WIkipedia:DNA_demethylation","Reactome:R-HSA-5220952","EC:1.14.11.80","Reactome:R-HSA-5221014","Reactome:R-HSA-9817458","Reactome:R-HSA-5220990"],"synonyms":[{"name":"methylcytosine dioxygenase activity","type":"broad"}],"termid":"GO:0070579"}


id: GO:0016647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","secondary_identifiers":["EC:1.5.3.-"],"termid":"GO:0016647"}


id: GO:0032126
data:
  {"annotated_genes":["SJAG_02989","SJAG_02087","SJAG_02338","SJAG_02626","SJAG_02707","SJAG_04227"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98778,103664,117640],"is_not":false,"summary":null,"term":"GO:0032126"},{"annotations":[91695,69559,71216],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036286"}]},"cv_name":"cellular_component","definition":"A cell part that is composed of the eisosome membrane or MCC domain, a furrow-like plasma membrane sub-domain and associated integral transmembrane proteins, and the proteins (eisosome filaments) that form a scaffolding lattice on the cytoplasmic face. Eisosomes broadly affect overall plasma membrane organization.","definition_xrefs":["GOC:vw","PMID:16496001","PMID:22368779","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02087":null,"SJAG_02338":null,"SJAG_02626":null,"SJAG_02707":null,"SJAG_02989":null,"SJAG_04227":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"eisosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Eisosome"],"termid":"GO:0032126","terms_by_termid":{"GO:0032126":null,"GO:0036286":null}}


id: PBO:0052294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 3 like, subcortical maternal complex member","termid":"PBO:0052294"}


id: GO:0008169
data:
  {"annotated_genes":["SJAG_03877","SJAG_02417","SJAG_01043","SJAG_03531","SJAG_01192"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008425"},{"annotations":[95410,78770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009383"},{"annotations":[76116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003838"},{"annotations":[71226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004851"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the carbon atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01043":null,"SJAG_01192":null,"SJAG_02417":null,"SJAG_03531":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"C-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008169","terms_by_termid":{"GO:0003838":null,"GO:0004851":null,"GO:0008425":null,"GO:0009383":null}}


id: PBO:0109018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD13C divergent transcript","termid":"PBO:0109018"}


id: GO:0006201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanosine monophosphate into other compounds, including inosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GMP catabolic process","termid":"GO:0046038"},{"relation_name":"is_a","term_name":"IMP metabolic process","termid":"GO:0046040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GMP catabolic process to IMP","synonyms":[{"name":"GMP breakdown to IMP","type":"exact"},{"name":"GMP degradation to IMP","type":"exact"}],"termid":"GO:0006201"}


id: GO:0072586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of ATP-hydrolyzing DNA topoisomerase. DNA topoisomerase (ATP-hydrolyzing) regulator activity catalyzes a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"},{"relation_name":"is_a","term_name":"ATPase regulator activity","termid":"GO:0060590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) regulator activity","termid":"GO:0072586"}


id: PBO:0068770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 7","termid":"PBO:0068770"}


id: PBO:0048458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC-rich sequence DNA-binding factor 2","termid":"PBO:0048458"}


id: GO:0061514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-34 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:dph","PMID:18467591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-34-mediated signaling pathway","termid":"GO:0061514"}


id: MONDO:0003556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare endometrial carcinoma characterized by the presence of both malignant glandular and malignant squamous cellular components.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"},{"relation_name":"is_a","term_name":"endometrial squamous cell carcinoma","termid":"MONDO:0006198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial adenosquamous carcinoma","secondary_identifiers":["MEDGEN:856563","UMLS:C3896969","EFO:1001952","NCIT:C114656","DOID:5631"],"synonyms":[{"name":"adenosquamous carcinoma of endometrium","type":"exact"},{"name":"adenosquamous carcinoma of the endometrium","type":"related"},{"name":"endometrial adenosquamous cancer","type":"related"},{"name":"endometrial adenosquamous carcinoma","type":"exact"},{"name":"endometrium adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0003556","xrefs":{"Monarch":{"xref_id":"0003556"}}}


id: PBO:0043435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connector enhancer of kinase suppressor of Ras 1","termid":"PBO:0043435"}


id: PBO:0073221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 6B","termid":"PBO:0073221"}


id: GO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus contributing to an immune response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"},{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"cytokine production involved in immune response","secondary_identifiers":["GO:0002374","GO:0002375"],"synonyms":[{"name":"cytokine biosynthetic process involved in immune response","type":"narrow"},{"name":"cytokine production during immune response","type":"related"},{"name":"cytokine secretion during immune response","type":"related"},{"name":"cytokine secretion involved in immune response","type":"related"}],"termid":"GO:0002367"}


id: GO:0045506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-24 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-24 receptor activity","synonyms":[{"name":"IL-24 receptor activity","type":"exact"},{"name":"IL-24R","type":"exact"}],"termid":"GO:0045506"}


id: PBO:0017774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Nnf1","termid":"PBO:0017774"}


id: PBO:0003320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein Mdm35 (predicted)","termid":"PBO:0003320"}


id: PBO:0082972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic RNA-binding protein; contains an RNA recognition motif (RRM); may have a role in mRNA translation, as suggested by genetic interactions with genes encoding proteins involved in translational initiation","termid":"PBO:0082972"}


id: PBO:0047222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 226 member B","termid":"PBO:0047222"}


id: GO:0071347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-1 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-1","termid":"GO:0070555"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-1","synonyms":[{"name":"cellular response to IL-1","type":"exact"}],"termid":"GO:0071347"}


id: GO:0106242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = (+)-kolavenyl diphosphate.","definition_xrefs":["GOC:eab","RHEA:54676","PMID:29315936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"kolavenyl diphosphate synthase activity","secondary_identifiers":["EC:5.5.1.29"],"termid":"GO:0106242"}


id: MONDO:0004359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by the presence of one or more nonbizarre delusions that persist for at least 1 month; the delusion(s) are not due to schizophrenia or a mood disorder, and do not impair psychosocial functioning apart from the ramifications of the delusion(s).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychotic disorder","termid":"MONDO:0005485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"delusional disorder","secondary_identifiers":["MESH:D012563","NCIT:C94379","DOID:778","icd11.foundation:1974996783","SCTID:48500005","ICD9:297.1","ICD10WHO:F22.0","UMLS:C0011251","MEDGEN:8276"],"termid":"MONDO:0004359","xrefs":{"Monarch":{"xref_id":"0004359"}}}


id: GO:0047857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6-dihydrouracil + O2 = H2O2 + uracil.","definition_xrefs":["EC:1.3.3.7","RHEA:12384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dihydrouracil oxidase activity","secondary_identifiers":["MetaCyc:DIHYDROURACIL-OXIDASE-RXN","KEGG_REACTION:R00975"],"synonyms":[{"name":"5,6-dihydrouracil:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047857"}


