# terms

id: PATO:0001013
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001013 absolute intensity value (obsolete PATO:0001013)","termid":"PATO:0001013"}


id: GO:0010960
data:
  {"annotated_genes":["SJAG_04111","SJAG_02578","SJAG_03516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57554],"is_not":false,"summary":null,"term":"GO:0010960"},{"annotations":[74268,69981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of magnesium ions within an organism or cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02578":null,"SJAG_03516":null,"SJAG_04111":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"magnesium ion homeostasis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0010960","terms_by_termid":{"GO:0010960":null,"GO:0010961":null}}


id: GO:0005902
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-based cell projection","termid":"GO:0098858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microvillus","secondary_identifiers":["Wikipedia:Microvillus","NIF_Subcellular:sao671419673"],"synonyms":[{"name":"microvilli","type":"related"}],"termid":"GO:0005902"}


id: PBO:0067081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 116, pseudogene","termid":"PBO:0067081"}


id: PBO:0000177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR97","termid":"PBO:0000177"}


id: PBO:0049392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 6 (putative)","termid":"PBO:0049392"}


id: GO:0050340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thymidylate + H2O = thymidine + phosphate.","definition_xrefs":["MetaCyc:THYMIDYLATE-5-PHOSPHATASE-RXN","EC:3.1.3.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-nucleotidase activity","termid":"GO:0008253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thymidylate 5'-phosphatase activity","secondary_identifiers":["RHEA:11080"],"synonyms":[{"name":"dTMPase activity","type":"related"},{"name":"deoxythymidylate 5'-nucleotidase activity","type":"related"},{"name":"deoxythymidylate phosphohydrolase activity","type":"related"},{"name":"deoxythymidylic 5'-nucleotidase activity","type":"related"},{"name":"thymidylate 5' phosphatase activity","type":"exact"},{"name":"thymidylate 5'-nucleotidase activity","type":"related"},{"name":"thymidylate 5'-phosphohydrolase activity","type":"related"},{"name":"thymidylate nucleotidase activity","type":"related"}],"termid":"GO:0050340"}


id: MONDO:0013526
data:
  {"annotated_genes":["SJAG_04513"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85831],"is_not":false,"summary":null,"term":"MONDO:0013526"}]},"cv_name":"mondo","definition":"Any progressive myoclonic epilepsy in which the cause of the disease is a mutation in the GOSR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04513":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"progressive myoclonic epilepsy type 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:3872","Orphanet:280620","DOID:0111449","MEDGEN:1681379","icd11.foundation:878291417","OMIM:614018","UMLS:C5190805"],"synonyms":[{"name":"EPM6","type":"exact"},{"name":"GOSR2 progressive myoclonic epilepsy","type":"exact"},{"name":"GOSR2-related progressive myoclonus ataxia","type":"exact"},{"name":"North Sea progressive myoclonus epilepsy","type":"exact"},{"name":"PME type 6","type":"exact"},{"name":"epilepsy, progressive myoclonic 6","type":"exact"},{"name":"epilepsy, progressive myoclonic, 6","type":"related"},{"name":"epilepsy, progressive myoclonic, type 6","type":"exact"},{"name":"progressive myoclonic epilepsy caused by mutation in GOSR2","type":"exact"},{"name":"progressive myoclonus epilepsy type 6","type":"exact"}],"termid":"MONDO:0013526","terms_by_termid":{"MONDO:0013526":null},"xrefs":{"Monarch":{"xref_id":"0013526"}}}


id: GO:0006171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"cyclic nucleotide biosynthetic process","termid":"GO:0009190"},{"relation_name":"is_a","term_name":"cAMP metabolic process","termid":"GO:0046058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"cAMP biosynthetic process","synonyms":[{"name":"3',5' cAMP biosynthesis","type":"exact"},{"name":"3',5' cAMP biosynthetic process","type":"exact"},{"name":"3',5'-cAMP biosynthesis","type":"exact"},{"name":"3',5'-cAMP biosynthetic process","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate biosynthesis","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate biosynthetic process","type":"exact"},{"name":"cAMP anabolism","type":"exact"},{"name":"cAMP biosynthesis","type":"exact"},{"name":"cAMP formation","type":"exact"},{"name":"cAMP synthesis","type":"exact"},{"name":"cyclic AMP biosynthesis","type":"exact"},{"name":"cyclic AMP biosynthetic process","type":"exact"}],"termid":"GO:0006171"}


id: MONDO:1012618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lysosomal storage disorder that occurs in cats due to a mutation in the IDUA gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis I, domestic cat","secondary_identifiers":["OMIA:000664-9685"],"synonyms":[{"name":"Hurler syndrome, domestic cat","type":"related"},{"name":"MPS I","type":"exact"}],"termid":"MONDO:1012618","xrefs":{"Monarch":{"xref_id":"1012618"}}}


id: GO:0018000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal tyrosine of proteins to form the derivative N-acetyl-L-tyrosine.","definition_xrefs":["RESID:AA0053"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-tyrosine acetylation (obsolete GO:0018000)","termid":"GO:0018000"}


id: MONDO:0009372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encephalopathy due to hydroxykynureninuria is characterized by psychomotor retardation and nonprogressive encephalopathy associated with urinary excretion of large amounts of kynurenine, 3-hydroxykynurenine, and xanthurenic acid. It has been described in less than 30 patients. Other manifestations may include muscular hypertonia, headaches and stereotyped gestures. This disorder is transmitted as an autosomal recessive trait. It is caused by a defect in kynureninase, an enzyme of the tryptophane catabolic pathway.","definition_xrefs":["Orphanet:79155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of tryptophan metabolism","termid":"MONDO:0017350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"encephalopathy due to hydroxykynureninuria","secondary_identifiers":["ICD9:270.2","MEDGEN:78681","OMIM:236800","UMLS:C0268474","GARD:10039","MESH:C536081","icd11.foundation:1145853843","SCTID:72945002","DOID:0112257"],"synonyms":[{"name":"Xanthurenic aciduria","type":"exact"},{"name":"hydroxykynureninuria","type":"related"},{"name":"kynureninase deficiency","type":"exact"},{"name":"kynureninase deficiency, partial","type":"related"}],"termid":"MONDO:0009372","xrefs":{"Monarch":{"xref_id":"0009372"}}}


id: PBO:0034682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_centromere_during_meiotic_cell_cycle","termid":"PBO:0034682"}


id: PBO:0008392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP12 peptidyl-prolyl cis-trans isomerase Fkh1","termid":"PBO:0008392"}


id: PBO:0064836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 11 pseudogene 2","termid":"PBO:0064836"}


id: GO:1990926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which synaptic transmission, induced by the arrival of a spike (action potential) at a synapse, acts to increase the amount of neurotransmitter released in response to the arrival of subsequent spikes. This effect is seen when a train of closely space spikes arrives at a synapse with a low initial release probability. It occurs in a timeframe of tens to hundreds of milliseconds.","definition_xrefs":["PMID:11826273","GOC:sp","PMID:26738595","GOC:dos","ISBN:9780071120005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"short-term synaptic potentiation","synonyms":[{"name":"synaptic facilitation","type":"exact"}],"termid":"GO:1990926"}


id: GO:1901324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trichodermin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trichodermin","termid":"GO:1901324"}


id: GO:1990658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transferase complex which is capable of transferring nitrogenous groups from one component to another.","definition_xrefs":["GOC:bhm","PMID:25417112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"transnitrosylase complex","synonyms":[{"name":"transferase complex, transferring nitrogenous groups","type":"exact"}],"termid":"GO:1990658"}


id: PBO:0082211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,6-mannosyltransferase localized to the ER; responsible for addition of alpha-1,6 mannose to dolichol-linked Man7GlcNAc2; acts in the dolichol pathway for N-glycosylation; human homolog ALG12 complements yeast null mutant","termid":"PBO:0082211"}


id: GO:0008586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the veins on an imaginal disc-derived wing are generated and organized.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing vein morphogenesis","synonyms":[{"name":"wing vein morphogenesis","type":"exact"}],"termid":"GO:0008586"}


id: GO:0042117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a monocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte activation","termid":"GO:0042117"}


id: GO:2000953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xyloglucan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of xyloglucan metabolic process","termid":"GO:2000950"},{"relation_name":"is_a","term_name":"regulation of xyloglucan catabolic process","termid":"GO:2000951"},{"relation_name":"is_a","term_name":"positive regulation of hemicellulose catabolic process","termid":"GO:2000990"},{"relation_name":"positively_regulates","term_name":"xyloglucan catabolic process","termid":"GO:2000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of xyloglucan catabolic process","synonyms":[{"name":"positive regulation of xyloglucan catabolism","type":"exact"}],"termid":"GO:2000953"}


id: PBO:0046582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 24","termid":"PBO:0046582"}


id: FYPO:0001784
data:
  {"alleles_by_uniquename":{"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119348,119349,119351,119360,119363],"is_not":false,"summary":null,"term":"FYPO:0001784"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more endoplasmic reticulum (ER) membrane than normal. Excess ER membranes may form abnormal structures.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum morphology","termid":"FYPO:0000354"},{"relation_name":"is_a","term_name":"excess intracellular endomembrane system present","termid":"FYPO:0002652"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":5,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"excess endoplasmic reticulum membrane present","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_01906","SJAG_02763","SJAG_03940"],"single_locus_genotype_uniquenames":["nem1delta","nem2delta","ned1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"accumulated ER membrane","type":"exact"},{"name":"accumulated endoplasmic reticulum membrane","type":"exact"},{"name":"endoplasmic reticulum membrane present in greater amount","type":"exact"},{"name":"excess ER membrane present","type":"exact"},{"name":"excess endoplasmic reticulum membrane present during mitotic cell cycle","type":"related"},{"name":"excess endoplasmic reticulum membrane present during vegetative growth","type":"exact"},{"name":"increased endoplasmic reticulum membrane proliferation","type":"related"},{"name":"overdeveloped ER membrane","type":"exact"}],"termid":"FYPO:0001784","terms_by_termid":{"FYPO:0001784":null,"FYPO_EXT:0000001":null}}


id: GO:0004460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate + 2 [Fe(III)cytochrome c] = 2 [Fe(II)cytochrome c] + 2 H+ + pyruvate.","definition_xrefs":["RHEA:19909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate dehydrogenase activity","termid":"GO:0004457"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-lactate dehydrogenase (cytochrome) activity","secondary_identifiers":["MetaCyc:L-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN","EC:1.1.2.3"],"synonyms":[{"name":"(S)-lactate:ferricytochrome-c 2-oxidoreductase activity","type":"related"},{"name":"L(+)-lactate:cytochrome c oxidoreductase activity","type":"related"},{"name":"L-lactate cytochrome c oxidoreductase activity","type":"related"},{"name":"L-lactate cytochrome c reductase activity","type":"related"},{"name":"L-lactate ferricytochrome c oxidoreductase activity","type":"related"},{"name":"cytochrome b2","type":"related"},{"name":"cytochrome b2 (flavin-free derivative of flavocytochrome b2)","type":"related"},{"name":"dehydrogenase, lactate (cytochrome)","type":"related"},{"name":"flavocytochrome b2","type":"related"},{"name":"lactate dehydrogenase (cytochrome)","type":"related"},{"name":"lactic acid dehydrogenase activity","type":"broad"},{"name":"lactic cytochrome c reductase activity","type":"related"}],"termid":"GO:0004460"}


id: PBO:0052863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-6","termid":"PBO:0052863"}


id: FYPO:0000493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial genome maintenance is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial genome maintenance","termid":"FYPO:0000490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased mitochondrial genome maintenance","synonyms":[{"name":"increased mitochondrial genome maintenance during mitotic cell cycle","type":"related"},{"name":"increased mitochondrial genome maintenance during vegetative growth","type":"exact"},{"name":"mitochondrial genome maintenance: increased","type":"related"}],"termid":"FYPO:0000493"}


id: PBO:0003961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II and III subunit Rpb8","termid":"PBO:0003961"}


id: PBO:0082660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT transcriptional complex; evolutionarily conserved; involved in controlling mRNA initiation, elongation, and degradation; binds Cdc39p","termid":"PBO:0082660"}


id: PBO:0042900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 4","termid":"PBO:0042900"}


id: GO:0062134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts, increases the frequency, rate or extent of L-glutamine biosynthesis.","definition_xrefs":["GOC:ha","PMID:19755423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of L-glutamine biosynthetic process","termid":"GO:0062132"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"L-glutamine biosynthetic process","termid":"GO:1901704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-glutamine biosynthetic process","termid":"GO:0062134"}


id: GO:1905132
data:
  {"annotated_genes":["SJAG_01330","SJAG_01082","SJAG_01837","SJAG_04126","SJAG_01515","SJAG_03327","SJAG_04259","SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106116,114288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[116460,75086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[98494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[113575],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[94951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[101137],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic chromosome separation.","definition_xrefs":["GOC:vw","PMID:15620645","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome separation","termid":"GO:1905818"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of meiotic chromosome separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromosome separation during meiosis","type":"exact"},{"name":"regulation of meiotic chromosome resolution","type":"exact"}],"termid":"GO:1905132","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0099181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a presynapse.","definition_xrefs":["GOC:dos","PMID:23751498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of synapse","termid":"GO:0098918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of presynapse","termid":"GO:0099181"}


id: FYPO:0005215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is decreased during mitotic M phase","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to kinetochore during vegetative growth","termid":"FYPO:0002902"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during mitotic M phase","termid":"FYPO:0008164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to kinetochore during mitotic M phase","synonyms":[{"name":"decreased protein localisation to kinetochore during mitosis","type":"exact"},{"name":"decreased protein localization to kinetochore during mitotic M phase","type":"related"},{"name":"decreased protein localization to kinetochore during mitotic nuclear division","type":"exact"},{"name":"reduced protein localization to kinetochore during mitosis","type":"exact"}],"termid":"FYPO:0005215"}


id: PATO:0000844
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000844 auditory acuity (obsolete PATO:0000844)","termid":"PATO:0000844"}


id: GO:0030298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a receptor signaling protein tyrosine kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine kinase activator activity","termid":"GO:0030296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0140677","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"receptor signaling protein tyrosine kinase activator activity","synonyms":[{"name":"receptor signalling protein tyrosine kinase activator activity","type":"exact"}],"termid":"GO:0030298"}


id: PBO:0058770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6894","termid":"PBO:0058770"}


id: MONDO:0018107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete idiopathic recurrent and disabling cutaneous herpes (obsolete MONDO:0018107)","secondary_identifiers":["Orphanet:35061"],"termid":"MONDO:0018107","xrefs":{"Monarch":{"xref_id":"0018107"}}}


id: PR:Q10409
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tsr3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein tsr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.04c","synonyms":[{"name":"Spom972h-tsr3","type":"exact"}],"termid":"PR:Q10409"}


id: PBO:0061190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin U","termid":"PBO:0061190"}


id: PBO:0013780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type Mca1 (predicted)","termid":"PBO:0013780"}


id: PBO:0061739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 2 pseudogene 1","termid":"PBO:0061739"}


id: GO:0005208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete amyloid protein (obsolete GO:0005208)","synonyms":[{"name":"amyloid protein","type":"exact"}],"termid":"GO:0005208"}


id: PBO:0086984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of type 1 protein phosphatase Glc7p; involved in negative regulation of glucose-repressible genes; involved in regulation of the nucleocytoplasmic shuttling of Hxk2p; REG1 has a paralog, REG2, that arose from the whole genome duplication","termid":"PBO:0086984"}


id: MONDO:0010850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculomaxillofacial dysostosis","termid":"MONDO:0015824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Tessier number 4 facial cleft","secondary_identifiers":["OMIM:600251","GARD:16974","icd11.foundation:1796306367","MEDGEN:1642051","Orphanet:141258","UMLS:C4703420","DOID:0111706"],"synonyms":[{"name":"OBLFC1","type":"related"},{"name":"facial clefting, oblique, 1","type":"related"},{"name":"facial clefting, oblique, type 1","type":"exact"},{"name":"oculomaxillofacial dysplasia with oblique Facial clefts","type":"related"}],"termid":"MONDO:0010850","xrefs":{"Monarch":{"xref_id":"0010850"}}}


id: PBO:0045652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 10","termid":"PBO:0045652"}


id: GO:0010889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of sequestering of triglyceride. Triglyceride sequestration is the process of binding or confining any triester of glycerol such that it is separated from other components of a biological system.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid storage","termid":"GO:0010883"},{"relation_name":"regulates","term_name":"triglyceride storage","termid":"GO:0030730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of triglyceride storage","synonyms":[{"name":"regulation of sequestering of triacylglycerol","type":"exact"},{"name":"regulation of sequestering of triglyceride","type":"exact"},{"name":"regulation of triacylglycerol sequestration","type":"exact"}],"termid":"GO:0010889"}


id: PBO:0064107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pejvakin","termid":"PBO:0064107"}


id: MONDO:0019171
data:
  {"annotated_genes":["SJAG_03764","SJAG_04781","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85219,85220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014548"},{"annotations":[85218,85217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014550"},{"annotations":[86504,86505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032915"},{"annotations":[87155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013367"}]},"cv_name":"mondo","definition":"A hereditary cardiac disease characterized by a prolongation of the QT interval at basal ECG and by a high risk of life-threatening arrhythmias.","definition_xrefs":["Orphanet:768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03764":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial long QT syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:101016","GARD:16547","OMIMPS:192500","SCTID:442917000","MedDRA:10057926","UMLS:C1141890","MEDGEN:685787","NANDO:2200228","NORD:1675","icd11.foundation:1208831985"],"synonyms":[{"name":"LQTS","type":"exact"},{"name":"Long QT Syndrome","type":"exact"},{"name":"Romano-Ward long QT syndrome","type":"exact"},{"name":"Romano-Ward syndrome","type":"exact"},{"name":"Ward-Romano syndrome","type":"exact"},{"name":"congenital long QT syndrome","type":"exact"},{"name":"familial long QT syndrome","type":"exact"},{"name":"hereditary long QT syndrome","type":"exact"}],"termid":"MONDO:0019171","terms_by_termid":{"MONDO:0013367":null,"MONDO:0014548":null,"MONDO:0014550":null,"MONDO:0032915":null},"xrefs":{"Monarch":{"xref_id":"0019171"}}}


id: GO:0072287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric distal tubule are generated and organized. The metanephric distal tubule is a metanephric nephron tubule that begins at the macula densa and extends to the metanephric connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal tubule morphogenesis","termid":"GO:0072156"},{"relation_name":"is_a","term_name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"},{"relation_name":"part_of","term_name":"metanephric distal tubule development","termid":"GO:0072235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric distal tubule morphogenesis","termid":"GO:0072287"}


id: MONDO:0015471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare epilepsy typically characterized by isolated focal motor and somatosensory seizures. Less frequently other focal seizure types, with or without secondary generalization, have been described. The seizures usually happen when the patient is awake and take a benign course. The condition is transitory, interictal examinations are normal, and there is usually no family history of epilepsy.","definition_xrefs":["Orphanet:1544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adolescent-onset epilepsy syndrome","termid":"MONDO:0020073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign focal seizures of adolescence","secondary_identifiers":["MEDGEN:896830","SCTID:715425000","UMLS:C4275141","icd11.foundation:1800285392","GARD:18728"],"synonyms":[{"name":"adolescent benign focal crisis","type":"exact"}],"termid":"MONDO:0015471","xrefs":{"Monarch":{"xref_id":"0015471"}}}


id: GO:0061482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an irinotecan stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to irinotecan","termid":"GO:0061482"}


id: MONDO:0043103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition associated with reduced active import of iodide across the basolateral membrane of the follicular cells of the thyroid gland. Inactivating mutations in the SLC5A5 gene encoding the sodium-iodide symporter are responsible for the condition.","definition_xrefs":["NCIT:C121747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism","termid":"MONDO:0018612"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothyroidism due to iodide transport defect","secondary_identifiers":["GARD:2938","MEDGEN:124412","SCTID:22558005","UMLS:C0271826"],"synonyms":[{"name":"hypothyroidism due to iodide concentration defect","type":"related"},{"name":"hypothyroidism due to iodide transport defect","type":"exact"},{"name":"iodide Transport defect","type":"exact"},{"name":"iodide transport defect","type":"exact"},{"name":"iodide transport failure","type":"related"},{"name":"iodine accumulation defect","type":"related"},{"name":"iodine transport defect","type":"related"}],"termid":"MONDO:0043103","xrefs":{"Monarch":{"xref_id":"0043103"}}}


id: GO:0006591
data:
  {"annotated_genes":["SJAG_01019","SJAG_00635","SJAG_00636","SJAG_04577","SJAG_00412","SJAG_01461","SJAG_01592","SJAG_04546","SJAG_00695","SJAG_00392","SJAG_03398"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110966],"is_not":false,"summary":null,"term":"GO:0006591"},{"annotations":[118181,69991,78280,97957,110258,111697,106316,102418,110869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[70254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[71830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_03398":null,"SJAG_04546":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"ornithine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ornithine metabolism","type":"exact"}],"termid":"GO:0006591","terms_by_termid":{"GO:0006591":null,"GO:0006592":null,"GO:0019547":null,"GO:0042450":null}}


id: PBO:0047365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 19","termid":"PBO:0047365"}


id: MONDO:0044879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-invasive or invasive cystic epithelial neoplasm that affects almost exclusively females. It is characterized by the presence of columnar mucin-producing epithelial cells and ovarian-type stroma formation.","definition_xrefs":["NCIT:C41247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous neoplasm","termid":"MONDO:0024338"},{"relation_name":"is_a","term_name":"cystic tumor of the pancreas","termid":"MONDO:0044880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic mucinous-cystic neoplasm","secondary_identifiers":["MEDGEN:274120","ONCOTREE:MCN","UMLS:C1518872"],"synonyms":[{"name":"Pancreatic mucinous cystic neoplasm","type":"exact"},{"name":"Pancreatic mucinous-cystic neoplasm","type":"exact"},{"name":"mucinous cystic neoplasm","type":"related"}],"termid":"MONDO:0044879","xrefs":{"Monarch":{"xref_id":"0044879"}}}


id: MONDO:0006158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma that arises from the colon or rectum.","definition_xrefs":["NCIT:C96503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"},{"relation_name":"is_a","term_name":"colorectal lymphoma","termid":"MONDO:0024656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"colorectal diffuse large B-cell lymphoma","secondary_identifiers":["MEDGEN:474460","UMLS:C3272827","EFO:1000191"],"synonyms":[{"name":"colorectal DLBCL","type":"exact"},{"name":"colorectal diffuse large B-cell lymphoma","type":"exact"},{"name":"colorectum diffuse large B-cell lymphoma","type":"exact"},{"name":"diffuse large B-cell lymphoma of colorectum","type":"exact"}],"termid":"MONDO:0006158","xrefs":{"Monarch":{"xref_id":"0006158"}}}


id: FYPO:0001555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the intermediate RNAs formed during tRNA processing differ from wild type in size.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA processing","termid":"FYPO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"formation of abnormal tRNA processing intermediates","synonyms":[{"name":"abnormal tRNA maturation intermediates","type":"exact"},{"name":"formation of abnormal tRNA processing intermediates during mitotic cell cycle","type":"related"},{"name":"formation of abnormal tRNA processing intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0001555"}


id: PBO:0016936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR101","termid":"PBO:0016936"}


id: GO:0038019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the return of a Wnt receptor to an active state at the plasma membrane. An active state is when the receptor is ready to receive a Wnt signal. Internalized Wnt receptors can be recycled to the plasma membrane or sorted to lysosomes for protein degradation.","definition_xrefs":["GOC:signaling","PMID:19643732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor recycling","termid":"GO:0001881"},{"relation_name":"part_of","term_name":"positive regulation of Wnt signaling pathway","termid":"GO:0030177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Wnt receptor recycling","synonyms":[{"name":"Frizzled recycling","type":"narrow"}],"termid":"GO:0038019"}


id: PBO:0027486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_ubiquitinated_protein_in_cell_during_G0","termid":"PBO:0027486"}


id: GO:0120010
data:
  {"annotated_genes":["SJAG_03172","SJAG_03710","SJAG_03416","SJAG_03741","SJAG_01229","SJAG_03338","SJAG_03746","SJAG_01225","SJAG_05268","SJAG_16459","SJAG_00230","SJAG_01305","SJAG_04370","SJAG_03851","SJAG_03721"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89016,90695,97288,97349,98430,100328,101082,103836,105649,106539,107317,107443,108447,109319,116034],"is_not":false,"summary":null,"term":"GO:0120010"}]},"cv_name":"biological_process","definition":"The transport of phospholipids between membranes in which a phospholipid molecule is transported through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane.","definition_xrefs":["PMID:20823909","PMID:25797198","PMID:24220498","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"intermembrane lipid transfer","termid":"GO:0120009"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_05268":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"intermembrane phospholipid transfer","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120010","terms_by_termid":{"GO:0120010":null}}


id: GO:0039633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by a virus that results in the death of a cell in the host organism.","definition_xrefs":["GOC:jl","GOC:bm","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete killing by virus of host cell (obsolete GO:0039633)","synonyms":[{"name":"killing by phage of host cells","type":"narrow"},{"name":"killing by virus of host cells","type":"exact"}],"termid":"GO:0039633"}


id: MONDO:0016271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A adenoid cystic carcinoma that involves the body of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"uterine carcinoma","termid":"MONDO:0005213"},{"relation_name":"is_a","term_name":"uterine corpus cancer","termid":"MONDO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenoid cystic carcinoma of the corpus uteri","secondary_identifiers":["Orphanet:213741","icd11.foundation:350868040"],"synonyms":[{"name":"body of uterus adenoid cystic carcinoma","type":"exact"},{"name":"endometrial adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0016271","xrefs":{"Monarch":{"xref_id":"0016271"}}}


id: GO:0102308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + erythromycin D = S-adenosyl-L-homocysteine + erythromycin B + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete erythromycin D 3''-o-methyltransferase activity (obsolete GO:0102308)","termid":"GO:0102308"}


id: GO:0052351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates systemic acquired resistance in the symbiont organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of systemic acquired resistance in symbiont (obsolete GO:0052351)","synonyms":[{"name":"activation by organism of SAR in symbiont","type":"exact"},{"name":"activation by organism of systemic acquired resistance in symbiont","type":"exact"},{"name":"induction by organism of SAR in symbiont","type":"exact"},{"name":"induction by organism of systemic acquired resistance in symbiont","type":"exact"}],"termid":"GO:0052351"}


id: GO:2000040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in axis elongation.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in axis elongation (obsolete GO:2000040)","termid":"GO:2000040"}


id: GO:0061681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The Entner-Doudoroff pathway that proceeds through a D-gluconate intermediate and yields pyruvate and D-glyceraldehyde-3-phosphate.","definition_xrefs":["GOC:dph","PMID:12921536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"is_a","term_name":"Entner-Doudoroff pathway through gluconate","termid":"GO:0061679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"Entner-Doudoroff pathway through gluconate to D-glyceraldehyde-3-phosphate","secondary_identifiers":["MetaCyc:PWY-2221"],"termid":"GO:0061681"}


id: MONDO:0000655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete heavy chain disease (obsolete MONDO:0000655)","termid":"MONDO:0000655","xrefs":{"Monarch":{"xref_id":"0000655"}}}


id: GO:0033626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of integrin activation by cell surface receptor linked signal transduction. This can occur by increased affinity of an integrin for its extracellular ligands.","definition_xrefs":["PMID:14754902","GOC:add","PMID:12213832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"positive regulation of integrin activation","termid":"GO:0033625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of integrin activation by cell surface receptor linked signal transduction","synonyms":[{"name":"cell surface receptor linked signal transduction leading to integrin activation","type":"exact"},{"name":"cell surface receptor linked signal transduction leading to integrin complex activation","type":"exact"}],"termid":"GO:0033626"}


id: MOD:00636
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to S-ethylcysteine.","definition_xrefs":["Unimod:327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-ethylcysteine (Ser)","synonyms":[{"name":"Delta:H(4)C(2)O(-1)S(1)","type":"related"},{"name":"S-Ethylcystine from Serine","type":"related"}],"termid":"MOD:00636"}


id: PBO:0030660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Man9GlcNAc_level","termid":"PBO:0030660"}


id: MOD:01132
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01165. Remap to MOD:01165.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01132 5'phos Adenosinyl (obsolete MOD:01132)","termid":"MOD:01132"}


id: FYPO:0002345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to oxaliplatin. Cells stop growing (and may die) at a concentration of oxaliplatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to oxaliplatin","synonyms":[{"name":"hypersensitive to oxaliplatin","type":"exact"},{"name":"sensitive to oxaliplatin during mitotic cell cycle","type":"related"},{"name":"sensitive to oxaliplatin during vegetative growth","type":"exact"}],"termid":"FYPO:0002345"}


id: GO:0052257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism activates, maintains or increases the frequency, rate or extent of the innate immune response of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction (obsolete GO:0052257)","synonyms":[{"name":"MAMP dependent induction of innate immunity of other organism","type":"exact"},{"name":"MAMP-dependent induction of innate immunity of other organism","type":"exact"},{"name":"PAMP dependent induction of innate immunity of other organism","type":"exact"},{"name":"PAMP-dependent induction of innate immunity of other organism","type":"exact"},{"name":"general elicitor dependent induction of innate immunity of other organism","type":"exact"},{"name":"general elicitor-dependent induction of innate immunity of other organism","type":"exact"},{"name":"pathogen-associated molecular pattern dependent induction by organism of innate immunity of other organism during symbiotic interaction","type":"related"},{"name":"pathogen-associated molecular pattern dependent induction by organism of innate immunity of other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0052257"}


id: GO:1990225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Narrow, electron-dense part of the rhoptry that extends through the conoid at the apical tip of an apicomplexan parasite. The rhoptry neck serves as a duct through which the contents of the rhoptry are secreted after attachment to the host has been completed and at the commencement of invasion.","definition_xrefs":["PMID:24002067","GOC:giardia","PMID:23499754","GOC:pr","PMID:24070999","PMID:23937520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"rhoptry","termid":"GO:0020008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rhoptry neck","termid":"GO:1990225"}


id: GO:0034485
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108100],"is_not":false,"summary":null,"term":"GO:0034485"}]},"cv_name":"molecular_function","definition":"1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-3,4,5-trisphosphate) + H2O = 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-3,4-bisphosphate) + phosphate.","definition_xrefs":["EC:3.1.3.86","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol trisphosphate phosphatase activity","termid":"GO:0034594"},{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 5-phosphatase activity","termid":"GO:0034595"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:25528","MetaCyc:RXN-10036","Reactome:R-HSA-1675949"],"termid":"GO:0034485","terms_by_termid":{"GO:0034485":null}}


id: PBO:0067528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 672, pseudogene","termid":"PBO:0067528"}


id: SO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A peptide region which hydrogen bonded to another region of peptide running in the oposite direction (one running N-terminal to C-terminal and one running C-terminal to N-terminal). Hydrogen bonding occurs between every other C=O from one strand to every other N-H on the adjacent strand. In this case, if two atoms C-alpha (i) and C-alpha (j) are adjacent in two hydrogen-bonded beta strands, then they form two mutual backbone hydrogen bonds to each other's flanking peptide groups; this is known as a close pair of hydrogen bonds. The peptide backbone dihedral angles (phi, psi) are about (-140 degrees, 135 degrees) in antiparallel sheets.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_strand","termid":"SO:0001111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"antiparallel_beta_strand","secondary_identifiers":["BS:0000341"],"synonyms":[{"name":"antiparallel beta strand","type":"exact"}],"termid":"SO:0001112"}


id: PBO:0039608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANTXR cell adhesion molecule 1","termid":"PBO:0039608"}


id: PBO:0081873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 815, pseudogene","termid":"PBO:0081873"}


id: GO:0044716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 8-oxo-GDP + H2O = 8-oxo-GMP + phosphate.","definition_xrefs":["PMID:22556419","GOC:pde","RHEA:62356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"8-oxo-GDP phosphatase activity","secondary_identifiers":["Reactome:R-HSA-2395873"],"termid":"GO:0044716"}


id: PBO:0070971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 9","termid":"PBO:0070971"}


id: MONDO:0100480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diminished production of adrenocortical hormones due to autoimmune destruction of the adrenal glands.","definition_xrefs":["NCIT:C113814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune primary adrenal insufficiency","secondary_identifiers":["UMLS:C0271737","GARD:5740","icd11.foundation:1920929898","MEDGEN:543526","Orphanet:85138"],"synonyms":[{"name":"autoimmune Addison's disease","type":"exact"},{"name":"autoimmune adrenalitis","type":"related"}],"termid":"MONDO:0100480","xrefs":{"Monarch":{"xref_id":"0100480"}}}


id: PBO:0070488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 23","termid":"PBO:0070488"}


id: MONDO:0015979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary immunodeficiency due to a genetic defect in innate immunity (obsolete MONDO:0015135)","termid":"MONDO:0015135"}],"gene_count":0,"genotype_count":0,"name":"obsolete hereditary predisposition to infections (obsolete MONDO:0015979)","secondary_identifiers":["Orphanet:183710"],"synonyms":[{"name":"genetic susceptibility to infections due to particular pathogens","type":"exact"}],"termid":"MONDO:0015979","xrefs":{"Monarch":{"xref_id":"0015979"}}}


id: PBO:0082926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic 60S subunit biogenesis factor; associates with pre-60S particles; similar to Rei1p and shares partially redundant function in cytoplasmic 60S subunit maturation; contains dispersed C2H2 zinc finger domains","termid":"PBO:0082926"}


id: PBO:0048717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLRX5 pseudogene 3","termid":"PBO:0048717"}


id: PATO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000269 relative visual threshold (obsolete PATO:0000269)","termid":"PATO:0000269"}


id: GO:0042134
data:
  {"annotated_genes":["SJAG_04492","SJAG_02723","SJAG_02530","SJAG_03952","SJAG_03252"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59493,69345,73421,106463,113696],"is_not":false,"summary":null,"term":"GO:0042134"}]},"cv_name":"molecular_function","definition":"Binding to an unprocessed ribosomal RNA transcript.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02530":null,"SJAG_02723":null,"SJAG_03252":null,"SJAG_03952":null,"SJAG_04492":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"rRNA primary transcript binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pre-rRNA binding","type":"exact"}],"termid":"GO:0042134","terms_by_termid":{"GO:0042134":null}}


id: PBO:0053197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LETM1 domain containing 1","termid":"PBO:0053197"}


id: MONDO:0008902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly-ichthyosis syndrome","secondary_identifiers":["MEDGEN:347130","OMIM:211965","UMLS:C1859355","MESH:C537976"],"synonyms":[{"name":"camptodactyly ichthyosis syndrome","type":"related"},{"name":"camptodactyly-ichthyosis syndrome","type":"exact"}],"termid":"MONDO:0008902","xrefs":{"Monarch":{"xref_id":"0008902"}}}


id: PBO:0043953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta-gamma domain containing 1","termid":"PBO:0043953"}


id: MONDO:0011614
data:
  {"annotated_genes":["SJAG_04499"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85773],"is_not":false,"summary":null,"term":"MONDO:0011614"}]},"cv_name":"mondo","definition":"3-hydroxy-3-methylglutaryl-CoA synthase deficiency (HMG-CoA synthase deficiency) is a rare autosomal recessively inherited disorder of ketone body metabolism, reported in less than 20 patients to date, characterized clinically by episodes of decompensation (often associated with gastroenteritis or fasting) that present with vomiting, lethargy, hepatomegaly, non ketotic hypoglycemia and, in rare cases, coma. Patients are mostly asymptomatic between acute epidodes. HMG-CoA synthase deficiency requires an early diagnosis in order to avoid hypoglycemic crises that can lead to permanent brain damage or death.","definition_xrefs":["Orphanet:35701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04499":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA synthase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:414399","UMLS:C2751532","OMIM:605911","MESH:C567784","SCTID:725286002","GARD:2712","NANDO:2200498","DOID:0081168"],"synonyms":[{"name":"3-hydroxy-3-methylglutaryl-CoA synthase deficiency","type":"exact"},{"name":"3-hydroxy-3-methylglutaryl-CoA synthase-2 deficiency","type":"related"},{"name":"HMG CoA synthetase deficiency","type":"related"},{"name":"HMG-CoA synthase deficiency","type":"exact"},{"name":"HMG-CoA synthase-2 deficiency","type":"exact"},{"name":"HMGCS2D","type":"related"},{"name":"Hmgcs2 deficiency","type":"related"},{"name":"mitochondrial HMG-Coa synthase deficiency","type":"related"}],"termid":"MONDO:0011614","terms_by_termid":{"MONDO:0011614":null},"xrefs":{"Monarch":{"xref_id":"0011614"}}}


id: MONDO:0044781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome, occurring in the pediatric population, characterized by the normalization of proteinuria with the administration of corticosteroids.","definition_xrefs":["NCIT:C122797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid-resistant nephrotic syndrome","termid":"MONDO:0044765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome of childhood - steroid sensitive","secondary_identifiers":["SCTID:236380004","UMLS:C0403396","MEDGEN:588368"],"synonyms":[{"name":"nephrotic syndrome of childhood - steroid sensitive","type":"exact"},{"name":"steroid-responsive nephrotic syndrome","type":"exact"},{"name":"steroid-sensitive nephrotic syndrome","type":"exact"}],"termid":"MONDO:0044781","xrefs":{"Monarch":{"xref_id":"0044781"}}}


id: MONDO:0008387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring dermoid of cornea is characterized by annular limbal dermoids (growths with a skin-like structure) with corneal and conjunctival extension. Less than 30 cases have been described. Transmission is autosomal dominant and mutations in the PITX2 gene have been suggested as a potential cause of the condition.","definition_xrefs":["Orphanet:91481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ring dermoid of cornea","secondary_identifiers":["SCTID:723499000","GARD:9696","UMLS:C1867155","icd11.foundation:271430543","MESH:C535684","MEDGEN:357922","DOID:0111548","OMIM:180550"],"synonyms":[{"name":"RDC","type":"related"},{"name":"RING dermoid of cornea","type":"related"},{"name":"Ring dermoid syndrome","type":"exact"},{"name":"bilateral, annular limbal dermoids with corneal and conjunctival extension","type":"related"},{"name":"ring dermoid of cornea","type":"exact"}],"termid":"MONDO:0008387","xrefs":{"Monarch":{"xref_id":"0008387"}}}


id: MONDO:0020127
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id: PBO:0030701
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030701"}


id: GO:0110136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss, or modification of macromolecules within a protein-RNA complex, resulting in the alteration of an existing complex.","definition_xrefs":["PMID:20542003","PMID:24240281","PMID:19737519","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex remodeling","termid":"GO:0034367"},{"relation_name":"is_a","term_name":"protein-RNA complex organization","termid":"GO:0071826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-RNA complex remodeling","synonyms":[{"name":"protein-RNA complex remodelling","type":"exact"}],"termid":"GO:0110136"}


id: GO:0001532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-21 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-21 receptor activity","synonyms":[{"name":"IL-21 receptor activity","type":"exact"},{"name":"IL-21R","type":"exact"}],"termid":"GO:0001532"}


id: GO:0051470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ectoine across a membrane by means of some agent such as a transporter or a pore. Ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid) is a tetrahydropyrimidine commonly synthesized by halophilic bacteria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"ectoine transmembrane transport","synonyms":[{"name":"ectoine transport","type":"related"}],"termid":"GO:0051470"}


id: GO:0003038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of oxygen are received and are converted to a molecular signal by chemoreceptors in an aortic body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of reduced oxygen by chemoreceptor signaling","termid":"GO:0003020"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","termid":"GO:0003033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of reduced oxygen by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of reduced oxygen by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003038"}


id: MONDO:0002694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation or presence of a blood clot (thrombus) in the cavernous sinus of the brain. Infections of the paranasal sinuses and adjacent structures, craniocerebral trauma, and thrombophilia are associated conditions. Clinical manifestations include dysfunction of cranial nerves iii, iv, V, and vi, marked periorbital swelling, chemosis, fever, and visual loss. (From Adams et al., Principles of Neurology, 6th ed, p711)","definition_xrefs":["MESH:D020226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial sinus thrombosis","termid":"MONDO:0002692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cavernous sinus thrombosis","secondary_identifiers":["DOID:3575","SCTID:89980009","MEDGEN:65970","UMLS:C0238454"],"synonyms":[{"name":"thrombosis of cavernous venous sinus","type":"exact"}],"termid":"MONDO:0002694","xrefs":{"Monarch":{"xref_id":"0002694"}}}


id: MONDO:0013641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Warburg micro syndrome in which the cause of the disease is a mutation in the RAB3GAP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Warburg micro syndrome","termid":"MONDO:0016649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320","MONDO:0006025"],"is_obsolete":false,"name":"Warburg micro syndrome 2","secondary_identifiers":["UMLS:C3280214","DOID:0110717","GARD:15780","OMIM:614225","MEDGEN:481844"],"synonyms":[{"name":"RAB3GAP2 Warburg micro syndrome","type":"exact"},{"name":"WARBM2","type":"exact"},{"name":"WARBURG micro syndrome 2","type":"related"},{"name":"Warburg micro syndrome 2","type":"exact"},{"name":"Warburg micro syndrome caused by mutation in RAB3GAP2","type":"exact"},{"name":"Warburg micro syndrome type 2","type":"exact"},{"name":"micro syndrome 2","type":"exact"}],"termid":"MONDO:0013641","xrefs":{"Monarch":{"xref_id":"0013641"}}}


id: PBO:0079384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 1 class VI pseudogene 2","termid":"PBO:0079384"}


id: GO:0036418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mycolate outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:md","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of mycolate outer membrane (obsolete GO:0036418)","synonyms":[{"name":"intrinsic to MOM","type":"exact"},{"name":"intrinsic to mycolate outer membrane","type":"narrow"},{"name":"intrinsic to mycomembrane","type":"exact"}],"termid":"GO:0036418"}


id: GO:0047015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 2-methyl-3-hydroxybutyryl-CoA = NADH + H+ + 2-methylaceto-acetyl-CoA.","definition_xrefs":["EC:1.1.1.178","MetaCyc:1.1.1.178-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity","secondary_identifiers":["RHEA:13281"],"synonyms":[{"name":"(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA:NAD+ oxidoreductase activity","type":"related"},{"name":"2-methyl-3-hydroxy-butyryl CoA dehydrogenase activity","type":"related"},{"name":"2-methyl-3-hydroxybutyryl coenzyme A dehydrogenase activity","type":"related"},{"name":"2-methyl-3-hydroxybutyryl-CoA dehydrogenase activity","type":"related"}],"termid":"GO:0047015"}


id: MOD:00735
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a hexosuronic acid group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"hexosuronylated","synonyms":[{"name":"HexA","type":"exact"}],"termid":"MOD:00735"}


id: PBO:0055851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 1B","termid":"PBO:0055851"}


id: PBO:0083682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal Rab family GTPase; required for vacuolar protein sorting, endocytosis and multivesicular body (MVB) biogenesis and sorting; required for localization of the CORVET complex to endosomes; involved in autophagy and ionic stress tolerance; similar to Vps21p and Ypt53p; mammalian Rab5 homolog; protein abundance increases in response to DNA replication stress","termid":"PBO:0083682"}


id: MONDO:0009388
data:
  {"annotated_genes":["SJAG_02388","SJAG_01061"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85245,85246],"is_not":false,"summary":null,"term":"MONDO:0009388"}]},"cv_name":"mondo","definition":"Hyperlysinaemia is a lysine metabolism disorder characterized by elevated levels of lysine in the cerebrospinal fluid and blood. Variable degrees of saccharopinuria are also present.","definition_xrefs":["Orphanet:2203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of lysine and hydroxylysine metabolism","termid":"MONDO:0017351"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01061":null,"SJAG_02388":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hyperlysinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:58558003","GARD:2828","OMIM:238700","UMLS:C0268553","DOID:9274","HP:0002161","ICD9:270.7","MEDGEN:82816","NCIT:C123433"],"synonyms":[{"name":"Alpha-aminoadipic semialdehyde synthase deficiency","type":"related"},{"name":"L-lysine NAD-oxido-reductase deficiency","type":"related"},{"name":"L-lysine:NAD-oxido-reductase deficiency","type":"related"},{"name":"hyperlysinemia","type":"exact"},{"name":"hyperlysinemia (disease)","type":"exact"},{"name":"hyperlysinemia type I","type":"exact"},{"name":"hyperlysinemia, type 1","type":"related"},{"name":"hyperlysinemia, type I","type":"related"},{"name":"lysine alpha-ketoglutarate reductase deficiency","type":"exact"},{"name":"lysine intolerance","type":"related"},{"name":"lysine:Alpha-ketoglutarate reductase deficiency","type":"related"}],"termid":"MONDO:0009388","terms_by_termid":{"MONDO:0009388":null},"xrefs":{"Monarch":{"xref_id":"0009388"}}}


id: PBO:0068498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 83, pseudogene","termid":"PBO:0068498"}


id: GO:0052743
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990649"},{"annotations":[108094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052659"},{"annotations":[108096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol tetrakisphosphate + H2O = myo-inositol trisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"inositol tetrakisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052743","terms_by_termid":{"GO:0052659":null,"GO:1990649":null,"GO:1990650":null}}


id: FYPO:0006948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell that is subject to glucose starvation is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during glucose starvation","synonyms":[{"name":"normal cellular protein level during glucose starvation","type":"exact"},{"name":"normal protein accumulation during glucose starvation","type":"related"},{"name":"normal protein level during glucose depletion","type":"exact"},{"name":"normal protein level during glucose deprivation","type":"exact"}],"termid":"FYPO:0006948"}


id: GO:1900842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of helvolic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of helvolic acid biosynthetic process","termid":"GO:1900840"},{"relation_name":"positively_regulates","term_name":"helvolic acid biosynthetic process","termid":"GO:1900812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of helvolic acid biosynthetic process","synonyms":[{"name":"up regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"up-regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"upregulation of helvolic acid biosynthetic process","type":"exact"}],"termid":"GO:1900842"}


id: MONDO:0859226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniotubular dysplasia, Ikegawa type","secondary_identifiers":["DOID:0112340","OMIM:619727","UMLS:C5575335","MEDGEN:1806238"],"termid":"MONDO:0859226","xrefs":{"Monarch":{"xref_id":"0859226"}}}


id: PBO:0076647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 3","termid":"PBO:0076647"}


id: MONDO:0005387
data:
  {"annotated_genes":["SJAG_04738","SJAG_02954","SJAG_04114","SJAG_04703","SJAG_02690","SJAG_04950","SJAG_00103","SJAG_03051","SJAG_03418","SJAG_04148","SJAG_02339","SJAG_00377","SJAG_02294","SJAG_03698","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[85762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[86751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[86997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[85807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[85423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[86214,86213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[85508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[85910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[86805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[86399,86398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"Absent or premature cessation of ovarian function due to a pathologic process originating within the ovaries.","definition_xrefs":["NCIT:C113352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian dysfunction","termid":"MONDO:0001889"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00377":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02690":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"primary ovarian failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:5426","SCTID:370999003","SCTID:65846009","UMLS:C0085215","MESH:D016649","MEDGEN:38820","Orphanet:619","EFO:0004266","ICD10CM:E28.3","ICD9:253.4","ICD9:256.39","NANDO:2100139"],"synonyms":[{"name":"female hypergonadotropic hypogonadism","type":"related"},{"name":"hypergonadotrophic ovarian failure","type":"related"},{"name":"hypergonadotropic hypogonadism","type":"related"},{"name":"hypergonadotropic hypogonadism (female)","type":"related"},{"name":"premature menopause","type":"related"},{"name":"premature ovarian failure","type":"related"},{"name":"premature ovarian insufficiency","type":"related"},{"name":"primary female hypogonadism","type":"related"},{"name":"primary ovarian failure","type":"exact"},{"name":"primary ovarian insufficiency","type":"exact"}],"termid":"MONDO:0005387","terms_by_termid":{"MONDO:0008840":null,"MONDO:0009258":null,"MONDO:0010350":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0005387"}}}


id: PBO:0064783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1D","termid":"PBO:0064783"}


id: PBO:0028647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sister_chromatid_separation_during_meiosis_I","termid":"PBO:0028647"}


id: PBO:0001195
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates srk1","termid":"PBO:0001195"}


id: PBO:0051083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant gamma 1 (G1m marker)","termid":"PBO:0051083"}


id: PBO:0003688
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.4","termid":"PBO:0003688"}


id: PBO:0062090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 40 pseudogene","termid":"PBO:0062090"}


id: PBO:0001707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S13 (predicted)","termid":"PBO:0001707"}


id: PBO:0072537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 67","termid":"PBO:0072537"}


id: PBO:0110872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone, AAA family ATPase Rvb2","termid":"PBO:0110872"}


id: PBO:0049034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 21","termid":"PBO:0049034"}


id: GO:0072582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 17-beta-hydroxysteroid + NADP+ = a 17-oxosteroid + NADPH + H+.","definition_xrefs":["GOC:kad","PMID:17074428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"17-beta-hydroxysteroid dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:69284"],"termid":"GO:0072582"}


id: PBO:0035713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_actin_filament-based_movement","termid":"PBO:0035713"}


id: PBO:0016957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine-rich Schizosaccharomyces specific protein","termid":"PBO:0016957"}


id: PBO:0060044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 32","termid":"PBO:0060044"}


id: GO:0018479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzaldehyde + NAD+ + H2O = benzoate + NADH + H+.","definition_xrefs":["EC:1.2.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN","RHEA:11840","UM-BBD_reactionID:r0269"],"synonyms":[{"name":"benzaldehyde (NAD) dehydrogenase activity","type":"related"},{"name":"benzaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018479"}


id: GO:0050664
data:
  {"annotated_genes":["SJAG_05033","SJAG_03098"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78917,79001],"is_not":false,"summary":null,"term":"GO:0050664"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule.","definition_xrefs":["EC:1.6.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03098":null,"SJAG_05033":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor","type":"related"}],"termid":"GO:0050664","terms_by_termid":{"GO:0050664":null}}


id: GO:0023043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which information is sent from one location to another, within a living organism or between living organisms, via a lipid mediator.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signaling via lipid mediator (obsolete GO:0023043)","synonyms":[{"name":"signaling via lipid mediator","type":"exact"},{"name":"signalling via lipid mediator","type":"exact"}],"termid":"GO:0023043"}


id: PBO:0030057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_minichromosome_loss_during_vegetative_growth","termid":"PBO:0030057"}


id: MONDO:0009801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial osteodysplasia, Anderson type is a rare, genetic dysostosis disorder characterized by craniofacial bone abnormalities (i.e. midface hypoplasia, broad, flat nasal bridge, narrow, thin prognathic mandible with pointed chin, malocclusion, partial dental agenesis) associated with additional osseous anomalies, including scoliosis, calvarial thinning, pointed spinous processes, clinodactyly and abnormal phalanges. Elevated erythrocyte sedimentation rate, hyperuricemia and hypertension have also been reported. There have been no further descriptions in the literature since 1982.","definition_xrefs":["Orphanet:2769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial osteodysplasia, Anderson type","secondary_identifiers":["GARD:4136","MEDGEN:337990","OMIM:259250","UMLS:C1850186","icd11.foundation:107132680","MESH:C564923"],"synonyms":[{"name":"osteodysplasia familial Anderson type","type":"related"},{"name":"osteodysplasia, familial, Anderson type","type":"related"}],"termid":"MONDO:0009801","xrefs":{"Monarch":{"xref_id":"0009801"}}}


id: PBO:0047133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 171 member A2","termid":"PBO:0047133"}


id: PR:P78937
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sua1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate adenylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.08c","synonyms":[{"name":"ATP-sulfurylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sua1","type":"exact"},{"name":"sulfate adenylate transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78937"}


id: GO:0044387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stopping, prevention, or reduction in frequency, rate or extent of protein kinase activity as a result of regulating the phosphorylation status of that protein kinase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein kinase activity by regulation of protein phosphorylation","termid":"GO:0044387"}


id: PBO:0047961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAT regulator of WNT signaling pathway 1","termid":"PBO:0047961"}


id: PBO:0042672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 6","termid":"PBO:0042672"}


id: FYPO:0001228
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in vegetative growth phase of the life cycle, in which the amount of protein measured in the cell nucleus is higher than normal during a cellular response to hydrogen peroxide. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nuclear protein level during vegetative growth","termid":"FYPO:0000255"},{"relation_name":"is_a","term_name":"increased protein level during cellular response to hydrogen peroxide","termid":"FYPO:0001102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0002403"],"is_obsolete":false,"name":"increased nuclear protein level during cellular response to hydrogen peroxide","synonyms":[{"name":"increased nuclear protein level during cellular response to H2O2","type":"exact"},{"name":"increased nuclear protein level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased nuclear protein level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"increased protein level in nucleus during cellular response to hydrogen peroxide","type":"related"},{"name":"nuclear accumulation of protein during cellular response to hydrogen peroxide","type":"exact"},{"name":"nuclear protein accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"nuclear protein accumulation during cellular response to hydrogen peroxide during vegetative growth","type":"related"},{"name":"nuclear protein accumulation in response to hydrogen peroxide","type":"related"}],"termid":"FYPO:0001228"}


id: PBO:0063997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 31","termid":"PBO:0063997"}


id: PR:P87124
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3A12.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3A12.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.08","synonyms":[{"name":"Spom972h-SPAC3A12.08","type":"exact"}],"termid":"PR:P87124"}


id: GO:0009280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. In Gram-negative bacteria the membrane that separates the cytoplasm from the murein sacculus.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall inner membrane (obsolete GO:0009280)","synonyms":[{"name":"cell wall inner membrane","type":"exact"},{"name":"cytoplasmic membrane","type":"broad"}],"termid":"GO:0009280"}


id: PBO:0002713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-ribose methyltransferase (predicted)","termid":"PBO:0002713"}


id: PBO:0034489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_reverse_centromeric_outer_repeat_transcript_level","termid":"PBO:0034489"}


id: PBO:0088078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease that cleaves Ub-protein fusions; UBP13 has a paralog, UBP9, that arose from the whole genome duplication","termid":"PBO:0088078"}


id: PBO:0029948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029948"}


id: MONDO:0002144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperuricemia (obsolete MONDO:0002144)","secondary_identifiers":["ICD9:790.6","MESH:D033461","DOID:1920","SCTID:35885006"],"synonyms":[{"name":"blood urate raized","type":"exact"},{"name":"hyperuricemia","type":"exact"},{"name":"obsolete hyperuricemia (disease)","type":"exact"},{"name":"uricacidemia","type":"exact"}],"termid":"MONDO:0002144","xrefs":{"Monarch":{"xref_id":"0002144"}}}


id: PBO:0061340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPL4 homolog, ubiquitin recognition factor","termid":"PBO:0061340"}


id: MONDO:0008797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anodontia is an extreme developmental dental anomaly characterized by the complete absence of all teeth.","definition_xrefs":["Orphanet:99797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anodontia","secondary_identifiers":["OMIM:206780","SCTID:16958000","MedDRA:10002583","UMLS:C0399352","MEDGEN:98313","GARD:5818","DOID:13714","ICD10CM:K00.0","icd11.foundation:413433873","ICD9:520.0","MESH:D000848"],"synonyms":[{"name":"absence of permanent teeth","type":"related"},{"name":"anodontia of permanent dentition","type":"related"},{"name":"complete absence of teeth","type":"exact"},{"name":"developmental absence of tooth","type":"exact"},{"name":"teeth, permanent, absence of","type":"related"},{"name":"total anodontia of permanent and deciduous teeth","type":"exact"}],"termid":"MONDO:0008797","xrefs":{"Monarch":{"xref_id":"0008797"}}}


id: PBO:0110354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 pseudogene 1","termid":"PBO:0110354"}


id: FYPO:0005660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of crossover associated with a gene conversion event during meiotic recombination is decreased.","definition_xrefs":["PomBase:mah","PMID:25414342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal frequency of meiotic crossover associated with gene conversion","termid":"FYPO:0005658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased frequency of meiotic crossover associated with gene conversion","synonyms":[{"name":"decreased levels of meiotic crossover associated with a gene conversion event","type":"exact"},{"name":"reduced frequency of meiotic crossover associated with gene conversion","type":"exact"}],"termid":"FYPO:0005660"}


id: _global:regulates_o_transports_or_maintains_localization_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_transports_or_maintains_localization_of","secondary_identifiers":["GOREL:0000038"],"termid":"_global:regulates_o_transports_or_maintains_localization_of"}


id: PBO:0027175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_septated_vegetative_cell","termid":"PBO:0027175"}


id: GO:0019797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-3-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["RHEA:22872","EC:1.14.11.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"procollagen-proline dioxygenase activity","termid":"GO:0019798"},{"relation_name":"is_a","term_name":"peptidyl-proline 3-dioxygenase activity","termid":"GO:0031544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"procollagen-proline 3-dioxygenase activity","secondary_identifiers":["MetaCyc:PROCOLLAGEN-PROLINE-3-DIOXYGENASE-RXN","KEGG_REACTION:R03218","Reactome:R-HSA-1980233"],"synonyms":[{"name":"procollagen-L-proline,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"},{"name":"procollagen-proline,2-oxoglutarate 3-dioxygenase activity","type":"related"},{"name":"proline,2-oxoglutarate 3-dioxygenase activity","type":"related"},{"name":"prolyl 3-hydroxylase activity","type":"broad"},{"name":"prolyl-4-hydroxyprolyl-glycyl-peptide, 2-oxoglutarate: oxygen oxidoreductase, 3-hydroxylating activity","type":"related"},{"name":"protocollagen proline 3-hydroxylase activity","type":"related"}],"termid":"GO:0019797"}


id: GO:0047482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine.","definition_xrefs":["EC:6.3.2.7","RHEA:17969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase activity","secondary_identifiers":["MetaCyc:6.3.2.7-RXN","KEGG_REACTION:R02786"],"synonyms":[{"name":"L-lysine-adding enzyme activity","type":"related"},{"name":"MurE synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:L-lysine gamma-ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine synthetase activity","type":"related"},{"name":"UPD-MurNAc-L-Ala-D-Glu:L-Lys ligase activity","type":"related"},{"name":"uridine diphospho-N-acetylmuramoylalanyl-D-glutamyllysine synthetase activity","type":"related"}],"termid":"GO:0047482"}


id: MONDO:0700170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplasm that occurs in a horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horse disease","termid":"MONDO:0024950"},{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equine neoplasm","termid":"MONDO:0700170","xrefs":{"Monarch":{"xref_id":"0700170"}}}


id: PR:000050526
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the hhf1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4, hhf1 gene translation product (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.03c","termid":"PR:000050526"}


id: GO:0018549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methanethiol + O2 + H2O = formaldehyde + hydrogen sulfide + hydrogen peroxide.","definition_xrefs":["EC:1.8.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"methanethiol oxidase activity","secondary_identifiers":["RHEA:11812","UM-BBD_reactionID:r0209","MetaCyc:METHANETHIOL-OXIDASE-RXN"],"synonyms":[{"name":"(MM)-oxidase activity","type":"related"},{"name":"MT-oxidase activity","type":"related"},{"name":"methanethiol:oxygen oxidoreductase activity","type":"related"},{"name":"methyl mercaptan oxidase activity","type":"related"},{"name":"methylmercaptan oxidase activity","type":"related"}],"termid":"GO:0018549"}


id: PBO:0067126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 172, pseudogene","termid":"PBO:0067126"}


id: MONDO:0010854
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86937],"is_not":false,"summary":null,"term":"MONDO:0010854"}]},"cv_name":"mondo","definition":"Oculo-ectodermal syndrome (OES) is characterized by the association of epibulbar dermoids and aplasia cutis congenital.","definition_xrefs":["Orphanet:3339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Toriello-Lacassie-Droste syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:723554006","UMLS:C1838329","DOID:0111705","GARD:10366","icd11.foundation:1983176633","OMIM:600268","MESH:C563969","MEDGEN:333068"],"synonyms":[{"name":"Toriello Lacassie Droste syndrome","type":"related"},{"name":"aplasia cutis congenita with epibulbar dermoids","type":"related"},{"name":"aplasia cutis congenita-epibulbar dermoids syndrome","type":"exact"},{"name":"oculo-ectodermal syndrome","type":"related"},{"name":"oculoectodermal syndrome","type":"exact"},{"name":"oculoectodermal syndrome, somatic","type":"exact"},{"name":"oes","type":"related"}],"termid":"MONDO:0010854","terms_by_termid":{"MONDO:0010854":null},"xrefs":{"Monarch":{"xref_id":"0010854"}}}


id: GO:0022406
data:
  {"annotated_genes":["SJAG_00053","SJAG_01324","SJAG_01772","SJAG_01598","SJAG_04413","SJAG_01168","SJAG_01116","SJAG_03005","SJAG_02626","SJAG_01437","SJAG_01305","SJAG_01564","SJAG_01633","SJAG_00029","SJAG_00280","SJAG_03552","SJAG_00380","SJAG_04221","SJAG_03536","SJAG_03848","SJAG_01929","SJAG_03170","SJAG_00171","SJAG_04966","SJAG_05184","SJAG_03247","SJAG_04417","SJAG_02699","SJAG_01697","SJAG_04023","SJAG_03710","SJAG_04978","SJAG_03347","SJAG_04370","SJAG_02587","SJAG_03499","SJAG_02320","SJAG_03416"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016240"},{"annotations":[91277,97254,61935,61433,117955,60231,90200,71663,111456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061817"},{"annotations":[70204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048211"},{"annotations":[79924,116405,69660,74466,69745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990456"},{"annotations":[80184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071562"},{"annotations":[106827,114996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"},{"annotations":[94116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140057"},{"annotations":[109603,100924,77548,112478,117350,75971,100116,71827,109448,99319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048278"},{"annotations":[60168,79910,92128,90370,118011,69530,79606,74756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006904"}]},"cv_name":"biological_process","definition":"The initial attachment of a membrane or protein to a target membrane. Docking requires only that the proteins come close enough to interact and adhere.","definition_xrefs":["GOC:isa_complete","PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00053":null,"SJAG_00171":null,"SJAG_00280":null,"SJAG_00380":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01305":null,"SJAG_01324":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_01598":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_01929":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_02626":null,"SJAG_02699":null,"SJAG_03005":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_03347":null,"SJAG_03416":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03710":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04221":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04966":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane docking","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0022406","terms_by_termid":{"GO:0006904":null,"GO:0016240":null,"GO:0048211":null,"GO:0048278":null,"GO:0061817":null,"GO:0071562":null,"GO:0140057":null,"GO:1990456":null,"GO:1990854":null}}


id: PBO:0043121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine induced apoptosis inhibitor 1 pseudogene","termid":"PBO:0043121"}


id: MONDO:0017675
data:
  {"annotated_genes":["SJAG_05011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"}]},"cv_name":"mondo","definition":"A palmoplantar keratosis characterized by keratoses with a \\\"raindrop\\\" pattern on the palmoplantar surface, skin lesions which may involve the whole of the palmoplantar surface, or may be more restricted in their distribution.","definition_xrefs":["DOID:0060361","Wikipedia:Palmoplantar_keratoderma#Punctate"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary palmoplantar keratoderma","termid":"MONDO:0019272"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"punctate palmoplantar keratoderma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:402773000","GARD:21297","MEDGEN:870406","Orphanet:307967","UMLS:C4024851","icd11.foundation:1212361548"],"synonyms":[{"name":"punctate PPK","type":"exact"},{"name":"punctate keratosis palmoplantaris","type":"exact"},{"name":"punctate palmoplantar hyperkeratosis","type":"exact"}],"termid":"MONDO:0017675","terms_by_termid":{"MONDO:0007858":null},"xrefs":{"Monarch":{"xref_id":"0017675"}}}


id: PBO:0066227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM33 divergent transcript","termid":"PBO:0066227"}


id: PBO:0034457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_at_MCB_promoters","termid":"PBO:0034457"}


id: GO:0039010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the pronephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of pronephric tubule identity","termid":"GO:0039005"},{"relation_name":"is_a","term_name":"specification of distal tubule identity","termid":"GO:0072084"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in pronephric nephron development","termid":"GO:0072196"},{"relation_name":"part_of","term_name":"pronephric distal tubule morphogenesis","termid":"GO:0039013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of pronephric distal tubule identity","termid":"GO:0039010"}


id: MONDO:0015540
data:
  {"annotated_genes":["SJAG_02572","SJAG_01697","SJAG_03536","SJAG_02453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012146"},{"annotations":[85475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011336"},{"annotations":[86422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013135"},{"annotations":[85780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"}]},"cv_name":"mondo","definition":"Hemophagocytic syndrome (HPS) is a rare immune disease and a potentially life-threatening disorder characterized by cytokine storm and overwhelming inflammation causing fever, hepatosplenomegaly, cytopenia, hypertriglyceridemia, hyperferritinemia, and hemophagocytosis in bone marrow, liver, spleen or lymph nodes. It can be either primary due to a genetic defect (primary hemophagocytic lymphohistiocytosis), or secondary to malignancies, to infections, most commonly with viruses such as Epstein-Barr virus or cytomegalovirus, human immunodeficiency virus, or to autoimmune disorders such as systemic lupus erythematosus or adult-onset Still disease (secondary hemophagocytic lymphohistiocytosis).","definition_xrefs":["Orphanet:158032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01697":null,"SJAG_02453":null,"SJAG_02572":null,"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hemophagocytic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C35439","GARD:20024","NORD:1938","UMLS:C3887558","DOID:0050120","NANDO:2200032","SCTID:234437005","ICD9:288.8","MEDGEN:854411","MedDRA:10058125","NCIT:C34792"],"synonyms":[{"name":"FHL","type":"related"},{"name":"HLH","type":"exact"},{"name":"Hemophagocytic Lymphohistiocytosis","type":"exact"},{"name":"familial erythrophagocytic lymphohistiocytosis","type":"related"},{"name":"familial hemophagocytic lymphohistiocytosis","type":"related"},{"name":"familial histiocytic reticulosis","type":"related"},{"name":"haemophagocytic syndrome","type":"related"},{"name":"hemophagocytic disorder","type":"related"},{"name":"hemophagocytic lymphohistiocytosis","type":"exact"},{"name":"hemophagocytic syndrome","type":"exact"}],"termid":"MONDO:0015540","terms_by_termid":{"MONDO:0011336":null,"MONDO:0011997":null,"MONDO:0012146":null,"MONDO:0013135":null},"xrefs":{"Monarch":{"xref_id":"0015540"}}}


id: PBO:0000869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase Ggt2","termid":"PBO:0000869"}


id: MONDO:0006944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of inherited kidney disorders characterized by the abnormally elevated levels of amino acids in urine. Genetic mutations of transport proteins result in the defective reabsorption of free amino acids at the proximal renal tubules. Renal aminoaciduria are classified by the specific amino acid or acids involved.","definition_xrefs":["MESH:D000608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal aminoaciduria","secondary_identifiers":["MedDRA:10001939","SCTID:35912001","UMLS:C0002534","MEDGEN:254"],"termid":"MONDO:0006944","xrefs":{"Monarch":{"xref_id":"0006944"}}}


id: MONDO:0019380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute arboviral infection caused by an alphavirus of the Togaviridae family transmitted by an infected mosquito, that more frequently affects children and that is characterized by the presence of mild flulike symptoms (fever, chills, headache, nausea, vomiting, and anorexia) but that can progress to weakness, altered mental status, photophobia, mental confusion, seizures, somnolence, coma and/or even death. The disease can leave neurological sequelae, mainly in infants and children, such as seizures, spasticity or behavioral disorders.","definition_xrefs":["Orphanet:83593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alphavirus infectious disease","termid":"MONDO:0005643"},{"relation_name":"is_a","term_name":"mosquito-borne viral encephalitis","termid":"MONDO:0020601"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"western equine encephalitis","secondary_identifiers":["icd11.foundation:1543765035","ICD10CM:A83.1","MEDGEN:57778","MESH:D020241","SCTID:47523006","UMLS:C0153064","NCIT:C85227","DOID:10843","ICD9:062.1","MedDRA:10014614","GARD:7888","EFO:0007546"],"synonyms":[{"name":"WEE","type":"related"},{"name":"Western equine encephalitis virus caused infectious encephalitis","type":"exact"},{"name":"Western equine encephalitis virus infectious encephalitis","type":"exact"},{"name":"Western equine encephalomyelitis","type":"exact"}],"termid":"MONDO:0019380","xrefs":{"Monarch":{"xref_id":"0019380"}}}


id: PBO:0051145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-23","termid":"PBO:0051145"}


id: GO:0046251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of limonene (4-isopropenyl-1-methyl-cyclohexene), a monocyclic monoterpene.","definition_xrefs":["PMID:10224006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limonene metabolic process","termid":"GO:0018923"},{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"limonene catabolic process","synonyms":[{"name":"limonene breakdown","type":"exact"},{"name":"limonene catabolism","type":"exact"},{"name":"limonene degradation","type":"exact"}],"termid":"GO:0046251"}


id: PBO:0027417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth","termid":"PBO:0027417"}


id: PBO:0026935
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_horsetail_movement","termid":"PBO:0026935"}


id: PATO:0001411
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having distinct structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structured","termid":"PATO:0001411"}


id: PBO:0056212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B6B","termid":"PBO:0056212"}


id: GO:1902364
data:
  {"annotated_genes":["SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:21131906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to spindle pole body","termid":"GO:1902363"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation to spindle pole body","type":"exact"},{"name":"down regulation of protein localization to spindle pole body","type":"exact"},{"name":"down-regulation of protein localisation to spindle pole body","type":"exact"},{"name":"down-regulation of protein localization to spindle pole body","type":"exact"},{"name":"downregulation of protein localisation to spindle pole body","type":"exact"},{"name":"downregulation of protein localization to spindle pole body","type":"exact"},{"name":"inhibition of protein localisation to spindle pole body","type":"narrow"},{"name":"inhibition of protein localization to spindle pole body","type":"narrow"},{"name":"negative regulation of protein localisation to spindle pole body","type":"exact"}],"termid":"GO:1902364","terms_by_termid":{"GO:1902543":null}}


id: PBO:0091726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, expressed in late meiosis and quiescence","termid":"PBO:0091726"}


id: GO:0097533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in cellular homeostasis caused by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["GOC:rl","PMID:19170886","GOC:go_curators","Wikipedia:Acid","PMID:10615049","GOC:BHF","GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stress response to acid chemical","termid":"GO:0097532"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"part_of","term_name":"cellular response to acid chemical","termid":"GO:0071229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular stress response to acid chemical","synonyms":[{"name":"cellular response to acid stress","type":"broad"},{"name":"cellular stress response to acid","type":"broad"}],"termid":"GO:0097533"}


id: GO:0052836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol pentakisphosphate = ADP + 5-triphospho-1D-myo-inositol pentakisphosphate.","definition_xrefs":["PMID:18355727","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"inositol 5-diphosphate pentakisphosphate 5-kinase activity","secondary_identifiers":["Reactome:R-HSA-1855224","Reactome:R-HSA-1855158"],"termid":"GO:0052836"}


id: PBO:0072297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 15","termid":"PBO:0072297"}


id: PBO:0039507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 27","termid":"PBO:0039507"}


id: PBO:0112988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase required for sister chromatid cohesion; elicits cohesin dimerization during S phase; acetylates Mps3p to regulate nuclear organization; modifies Smc3p at replication forks and Mcd1p in response to dsDNA breaks; phosphorylated by Cdc28p, Cdc7p, Mck1p to generate pair of phosphates spaced precisely for recognition by ubiquitin ligase SCF-Cdc4; relative distribution to nucleus increases upon DNA replication stress; mutations in human homolog ESCO2 cause Roberts syndrome","termid":"PBO:0112988"}


id: PBO:0079326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 14","termid":"PBO:0079326"}


id: SO:0000266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a methionine anticodon, and a 3' methionine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"methionine_tRNA_primary_transcript","termid":"SO:0000223"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl_tRNA","synonyms":[{"name":"methionyl tRNA","type":"exact"},{"name":"methionyl-transfer RNA","type":"exact"},{"name":"methionyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000266"}


id: GO:0008554
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73250],"is_not":false,"summary":null,"term":"GO:0008554"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out); by a phosphorylative mechanism.","definition_xrefs":["PMID:9224683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"P-type sodium transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:7.2.2.3"],"synonyms":[{"name":"Na(+)-exporting ATPase activity","type":"broad"},{"name":"Na(+)-transporting ATPase activity","type":"broad"},{"name":"Na+-exporting ATPase activity","type":"broad"},{"name":"Na+-transporting ATPase activity","type":"broad"},{"name":"sodium exporting ATPase activity, phosphorylative mechanism","type":"exact"},{"name":"sodium transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"sodium transport ATPase activity","type":"broad"},{"name":"sodium-exporting ATPase activity","type":"broad"},{"name":"sodium-exporting ATPase activity, phosphorylative mechanism","type":"exact"},{"name":"sodium-translocating P-type ATPase activity","type":"exact"}],"termid":"GO:0008554","terms_by_termid":{"GO:0008554":null}}


id: PBO:0029408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_conjugation_with_h-_cells","termid":"PBO:0029408"}


id: MONDO:0012927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"1q41q42 microdeletion syndrome is a chromosomal anomaly characterized by a severe developmental delay and/or intellectual disability, typical facial dysmorphic features, brain anomalies, seizures, cleft palate, clubfeet, nail hypoplasia and congenital heart disease.","definition_xrefs":["Orphanet:250999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"},{"relation_name":"is_a","term_name":"chromosome 1q deletion","termid":"MONDO:0022756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"chromosome 1q41-q42 deletion syndrome","secondary_identifiers":["MEDGEN:382704","GARD:3738","SCTID:716515000","OMIM:612530","DOID:0060412","UMLS:C2675857"],"synonyms":[{"name":"1q41-q42 deletion syndrome","type":"related"},{"name":"1q41-q42 microdeletion syndrome","type":"exact"},{"name":"1q41q42 microdeletion syndrome","type":"exact"},{"name":"Del(1)(q41q42)","type":"exact"},{"name":"chromosome 1q41-q42 deletion syndrome","type":"exact"},{"name":"chromosome 1q41-q42 deletion syndrome, isolated cases","type":"exact"},{"name":"deletion 1q41-q42","type":"related"},{"name":"holoprosencephaly 10","type":"related"},{"name":"monosomy 1q41-q42","type":"exact"},{"name":"monosomy 1q41q42","type":"exact"}],"termid":"MONDO:0012927","xrefs":{"Monarch":{"xref_id":"0012927"}}}


id: PBO:0077809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 regulated apoptosis inducing protein 1","termid":"PBO:0077809"}


id: GO:0035053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of dorsal vessel cardioblast cells to a heart proper cell fate and their capacity to differentiate into heart cells. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu","PMID:12397110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"embryonic heart tube anterior/posterior pattern specification","termid":"GO:0035054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal vessel heart proper cell fate commitment","termid":"GO:0035053"}


id: PBO:0028653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_snRNA_3'-end_processing","termid":"PBO:0028653"}


id: GO:0072278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the metanephric comma-shaped body is generated and organized. The metanephric comma-shaped body is the precursor structure to the metanephric S-shaped body that contributes to the morphogenesis of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"comma-shaped body morphogenesis","termid":"GO:0072049"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric comma-shaped body morphogenesis","termid":"GO:0072278"}


id: FYPO:0003411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere inner repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin silencing at centromere","termid":"FYPO:0002834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere inner repeat","synonyms":[{"name":"decreased chromatin silencing at centromere imr","type":"exact"},{"name":"decreased chromatin silencing at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at centromeric inner repeat region","type":"exact"},{"name":"decreased heterochromatin silencing at centromere inner repeat","type":"exact"},{"name":"reduced chromatin silencing at centromere inner repeat","type":"exact"}],"termid":"FYPO:0003411"}


id: SO:0000564
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one DJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_DJ_J_C_cluster","synonyms":[{"name":"V DJ J C cluster","type":"exact"},{"name":"V-(DJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000564"}


id: GO:0050312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-sulfoacetaldehyde + H2O = acetate + sulfite.","definition_xrefs":["EC:4.4.1.12","MetaCyc:SULFOACETALDEHYDE-LYASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfoacetaldehyde lyase activity (obsolete GO:0050312)","synonyms":[{"name":"sulphoacetaldehyde lyase activity","type":"exact"}],"termid":"GO:0050312"}


id: GO:0010907
data:
  {"annotated_genes":["SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of glucose metabolism. Glucose metabolic processes are the chemical reactions and pathways involving glucose, the aldohexose gluco-hexose.","definition_xrefs":["GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"glucose metabolic process","termid":"GO:0006006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of glucose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of glucose metabolism","type":"exact"}],"termid":"GO:0010907","terms_by_termid":{"GO:2001172":null}}


id: SO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR_region","synonyms":[{"name":"UTR region","type":"exact"}],"termid":"SO:0000837"}


id: FYPO:0003207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal during a cellular response to hydrogen peroxide. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein-protein interaction during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein binding during cellular response to hydrogen peroxide","type":"exact"},{"name":"decreased protein-protein interaction during cellular response to H2O2","type":"exact"},{"name":"decreased protein-protein interaction in response to hydrogen peroxide","type":"related"},{"name":"reduced protein-protein interaction during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0003207"}


id: MONDO:1010599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoparathyroidism that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoparathyroidism, non-human animal","termid":"MONDO:1010056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoparathyroidism, domestic cat","secondary_identifiers":["OMIA:000528-9685"],"termid":"MONDO:1010599","xrefs":{"Monarch":{"xref_id":"1010599"}}}


id: GO:1900596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-kotanin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"(+)-kotanin metabolic process","termid":"GO:1900594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(+)-kotanin biosynthetic process","synonyms":[{"name":"(+)-kotanin anabolism","type":"exact"},{"name":"(+)-kotanin biosynthesis","type":"exact"},{"name":"(+)-kotanin formation","type":"exact"},{"name":"(+)-kotanin synthesis","type":"exact"}],"termid":"GO:1900596"}


id: PBO:0005812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metacaspase Pca1","termid":"PBO:0005812"}


id: MONDO:0005460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute viral respiratory infection caused by a strain of influenza virus which is endemic in swine (pigs). Rarely reported in humans prior to 2009, the disease is caused by a mutated strain of swine influenza A (H1N1) virus. It is highly contagious and spreads mainly through coughing and sneezing. Signs and symptoms include fever, chills, coughing, sore throat headache, muscle ache, and generalized weakness. Antiviral medications are most effective in the first two days of the illness.","definition_xrefs":["NCIT:C80444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"influenza","termid":"MONDO:0005812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swine influenza","secondary_identifiers":["SCTID:442696006","DOID:0050211","MEDGEN:1385137","UMLS:C0276357","EFO:0005226"],"synonyms":[{"name":"H1N1 Influenza","type":"exact"},{"name":"H1N1 Virus infection","type":"exact"},{"name":"H1N1 flu","type":"exact"},{"name":"Influenza A (H1N1)","type":"exact"},{"name":"Influenza A (H1N1) Virus infection","type":"exact"},{"name":"Swine influenza virus caused influenza","type":"exact"},{"name":"Swine influenza virus influenza","type":"exact"},{"name":"swine flu","type":"exact"}],"termid":"MONDO:0005460","xrefs":{"Monarch":{"xref_id":"0005460"}}}


id: PBO:0057277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 499b","termid":"PBO:0057277"}


id: PBO:0111298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Prp40","termid":"PBO:0111298"}


id: SO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type VIa beta turn with the following phi and psi sngles on amino acid residues 2 and 3: phi-2 = -120 degrees, psi-2 = 120 degrees, phi-3 = -60 degrees, psi-3 = 0 degrees.","definition_xrefs":["PMID:27428516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn_type_six_a","termid":"SO:0001151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_six_a_two","synonyms":[{"name":"beta turn type six a two","type":"exact"},{"name":"type VIa2 beta turn","type":"exact"},{"name":"type VIa2 turn","type":"exact"}],"termid":"SO:0001153"}


id: PBO:0113117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enolase II, a phosphopyruvate hydratase; catalyzes conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; mRNA is asymmetrically distributed to daughter cells in a Sir2p-dependent manner, and asymmetry is lost during replicative aging; expression induced in response to glucose; ENO2 has a paralog, ENO1, that arose from the whole genome duplication","termid":"PBO:0113117"}


id: GO:0005471
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58920],"is_not":false,"summary":null,"term":"GO:0005471"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP(out) + ADP(in) = ATP(in) + ADP(out).","definition_xrefs":["TC:2.A.29.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP transmembrane transporter activity","termid":"GO:0005347"},{"relation_name":"is_a","term_name":"ADP transmembrane transporter activity","termid":"GO:0015217"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATP:ADP antiporter activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["GO:0005349","RHEA:34999"],"synonyms":[{"name":"ADP/ATP carrier protein","type":"exact"},{"name":"ADP/ATP translocase","type":"exact"},{"name":"ATP/ADP exchange","type":"exact"},{"name":"ATP/ADP exchanger","type":"exact"},{"name":"adenine nucleotide translocase","type":"exact"}],"termid":"GO:0005471","terms_by_termid":{"GO:0005471":null}}


id: PBO:0056495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3","termid":"PBO:0056495"}


id: FYPO:0000098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to calcium. Cells stop growing (and may die) at a concentration of calcium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to calcium","synonyms":[{"name":"hypersensitive to calcium","type":"exact"},{"name":"sensitive to calcium chloride","type":"narrow"},{"name":"sensitive to calcium during mitotic cell cycle","type":"related"},{"name":"sensitive to calcium during vegetative growth","type":"exact"},{"name":"sensitive to calcium ions","type":"exact"}],"termid":"FYPO:0000098"}


id: PBO:0058893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 11400","termid":"PBO:0058893"}


id: PBO:0047838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD dependent oxidoreductase domain containing 1","termid":"PBO:0047838"}


id: GO:0050070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-sn-glycero-3-phosphocholine = 2-acyl-sn-glycero-3-phosphocholine.","definition_xrefs":["RHEA:24356","EC:5.4.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular acyltransferase activity","termid":"GO:0016867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lysolecithin acylmutase activity","secondary_identifiers":["KEGG_REACTION:R03334","MetaCyc:LYSOLECITHIN-ACYLMUTASE-RXN"],"synonyms":[{"name":"lysolecithin 2,3-acylmutase activity","type":"related"},{"name":"lysolecithin migratase activity","type":"related"}],"termid":"GO:0050070"}


id: FYPO:0003828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the ribosomal small subunit protein S6 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:24463365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal ribosomal S6 protein phosphorylation during vegetative growth","synonyms":[{"name":"normal ribosomal S6 protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"normal ribosome S6 phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003828"}


id: PBO:0028132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0028132"}


id: PBO:0068571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 22, pseudogene","termid":"PBO:0068571"}


id: PBO:0065859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB17, member RAS oncogene family","termid":"PBO:0065859"}


id: PBO:0012008
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae vht1","termid":"PBO:0012008"}


id: PR:Q9UTL9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC144.05 gene.","definition_xrefs":["UniProtKB:Q9UTL9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C144.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.05","synonyms":[{"name":"Spom972h-SPAC144.05","type":"exact"}],"termid":"PR:Q9UTL9"}


id: PBO:0059851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 4","termid":"PBO:0059851"}


id: GO:0016074
data:
  {"annotated_genes":["SJAG_00943","SJAG_01191","SJAG_00854","SJAG_03112","SJAG_03745","SJAG_03179","SJAG_01521","SJAG_04754","SJAG_02350","SJAG_01369","SJAG_04153","SJAG_04942","SJAG_02553","SJAG_04527","SJAG_03234","SJAG_04768","SJAG_03984","SJAG_04321","SJAG_02382","SJAG_00752","SJAG_06613","SJAG_01176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117466],"is_not":false,"summary":null,"term":"GO:0016074"},{"annotations":[109993,73147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000494"},{"annotations":[101965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"},{"annotations":[79996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"},{"annotations":[90881,104572,113279,115100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034965"},{"annotations":[70020,70470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071036"},{"annotations":[74889,77338,115239,70476,75979,72998,74243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071051"},{"annotations":[92625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031126"},{"annotations":[88166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016077"},{"annotations":[87288,90590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043144"},{"annotations":[75375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034247"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving snoRNA, small nucleolar RNA, any of a class of small RNAs that are associated with the eukaryotic nucleus as components of small nucleolar ribonucleoproteins. They participate in the processing or modifications of many RNAs, mostly ribosomal RNAs (rRNAs) though snoRNAs are also known to target other classes of RNA, including spliceosomal RNAs, tRNAs, and mRNAs via a stretch of sequence that is complementary to a sequence in the targeted RNA.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00752":null,"SJAG_00854":null,"SJAG_00943":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01369":null,"SJAG_01521":null,"SJAG_02350":null,"SJAG_02382":null,"SJAG_02553":null,"SJAG_03112":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04754":null,"SJAG_04768":null,"SJAG_04942":null,"SJAG_06613":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sno(s)RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"box C/D sRNA metabolic process","type":"narrow"},{"name":"snoRNA metabolism","type":"narrow"}],"termid":"GO:0016074","terms_by_termid":{"GO:0000494":null,"GO:0000495":null,"GO:0016074":null,"GO:0016077":null,"GO:0031126":null,"GO:0034247":null,"GO:0034965":null,"GO:0043144":null,"GO:0071036":null,"GO:0071051":null,"GO:0106410":null}}


id: GO:0047865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethylglycine + electron-transfer flavoprotein + H2O = sarcosine + formaldehyde + reduced electron-transfer flavoprotein.","definition_xrefs":["EC:1.5.8.4","RHEA:52856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dimethylglycine dehydrogenase activity","secondary_identifiers":["MetaCyc:DIMETHYLGLYCINE-DEHYDROGENASE-RXN","KEGG_REACTION:R01565","Reactome:R-HSA-6797653"],"synonyms":[{"name":"N,N-dimethylglycine oxidase activity","type":"related"},{"name":"N,N-dimethylglycine:(acceptor) oxidoreductase (demethylating)","type":"related"},{"name":"N,N-dimethylglycine:acceptor oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0047865"}


id: MONDO:0054764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0005066"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation 8","secondary_identifiers":["UMLS:C4693587","MEDGEN:1645224","OMIM:617917"],"synonyms":[{"name":"NBIA8","type":"related"},{"name":"neurodegeneration with brain iron accumulation 8","type":"exact"}],"termid":"MONDO:0054764","xrefs":{"Monarch":{"xref_id":"0054764"}}}


id: PBO:0050568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H4","termid":"PBO:0050568"}


id: GO:0042837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-glucarate, the D-enantiomer of glucarate.","definition_xrefs":["GOC:jsg","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"},{"relation_name":"is_a","term_name":"glucarate biosynthetic process","termid":"GO:0019393"},{"relation_name":"is_a","term_name":"D-glucarate metabolic process","termid":"GO:0042836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-glucarate biosynthetic process","synonyms":[{"name":"D-glucarate anabolism","type":"exact"},{"name":"D-glucarate biosynthesis","type":"exact"},{"name":"D-glucarate formation","type":"exact"},{"name":"D-glucarate synthesis","type":"exact"},{"name":"saccharate biosynthesis","type":"exact"},{"name":"saccharate biosynthetic process","type":"exact"}],"termid":"GO:0042837"}


id: PBO:0044563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia 4","termid":"PBO:0044563"}


id: GO:0048053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the R1 and R6 pair of photoreceptors in the eye over time, from their formation to the mature structures. R1 and R6 are paired photoreceptors that contribute to the outer rhabdomeres. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor development","termid":"GO:0042051"},{"relation_name":"part_of","term_name":"R1/R6 cell differentiation","termid":"GO:0048052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R1/R6 development","termid":"GO:0048053"}


id: MONDO:0018560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anterior urethral valve (obsolete MONDO:0018560)","secondary_identifiers":["Orphanet:435372","SCTID:253907008"],"termid":"MONDO:0018560","xrefs":{"Monarch":{"xref_id":"0018560"}}}


id: PR:000050483
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rng2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"Ring assembly protein 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"SPAC4F8.13c","type":"related"},{"name":"Spom-rng2","type":"exact"},{"name":"rng2","type":"related"}],"termid":"PR:000050483"}


id: MONDO:1010560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida, non-human animal","termid":"MONDO:1010047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida, rabbit","secondary_identifiers":["OMIA:000933-9986"],"termid":"MONDO:1010560","xrefs":{"Monarch":{"xref_id":"1010560"}}}


id: PBO:0084623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine-S-sulfoxide reductase; involved in the response to oxidative stress; protects iron-sulfur clusters from oxidative inactivation along with MXR2; involved in the regulation of lifespan; reduced activity of human homolog implicated in Alzheimer disease","termid":"PBO:0084623"}


id: PBO:0068592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 43, pseudogene","termid":"PBO:0068592"}


id: FYPO:0007259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic spindle pole body duplication is increased.","definition_xrefs":["PMID:22438582","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle pole body duplication","termid":"FYPO:0007258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"increased meiotic spindle pole body duplication","synonyms":[{"name":"increased meiotic SPB duplication","type":"exact"},{"name":"increased spindle pole body duplication during meiotic cell cycle","type":"related"},{"name":"meiotic SPB overamplification","type":"exact"}],"termid":"FYPO:0007259"}


id: PR:O74842
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fft2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase fft2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.05c","synonyms":[{"name":"Fun thirty-related protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fft2","type":"exact"}],"termid":"PR:O74842"}


id: GO:0000738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of DNA, involving the hydrolysis of terminal 3',5'-phosphodiester bonds in one or two strands of deoxyribonucleotides.","definition_xrefs":["GOC:elh","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA catabolic process, exonucleolytic (obsolete GO:0000738)","synonyms":[{"name":"DNA breakdown, exonucleolytic","type":"exact"},{"name":"DNA degradation, exonucleolytic","type":"exact"},{"name":"exonucleolytic degradation of DNA","type":"exact"}],"termid":"GO:0000738"}


id: PBO:0061548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5C1B-RDH14 readthrough","termid":"PBO:0061548"}


id: GO:1901866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of capsorubin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00807","MetaCyc:PWY-5174","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"capsorubin metabolic process","termid":"GO:1901864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"capsorubin biosynthetic process","synonyms":[{"name":"capsorubin anabolism","type":"exact"},{"name":"capsorubin biosynthesis","type":"exact"},{"name":"capsorubin formation","type":"exact"},{"name":"capsorubin synthesis","type":"exact"}],"termid":"GO:1901866"}


id: FYPO:0007549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the two DNA masses separated by mitotic anaphase remain linked by the nuclear bridge, and then merge back into a single nucleus.","definition_xrefs":["PMID:32502403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"part_of","term_name":"abnormal mitosis","termid":"FYPO:0000337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000337","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"coalescence of partially separated nuclei","synonyms":[{"name":"coalescence of partially separated nuclei during mitotic cell cycle","type":"related"},{"name":"coalescence of partially separated nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0007549"}


id: FYPO:0005929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at the centromere outer repeat region is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased chromatin binding at centromere outer repeat","synonyms":[{"name":"decreased chromatin binding at centromere otr","type":"exact"},{"name":"decreased chromatin binding at centromere outer repeat region","type":"exact"},{"name":"decreased chromatin binding at centromeric outer repeat region","type":"exact"},{"name":"decreased chromatin binding at pericentric region","type":"related"},{"name":"decreased chromatin binding at pericentromeric region","type":"related"},{"name":"reduced chromatin binding at centromere outer repeat","type":"exact"}],"termid":"FYPO:0005929"}


id: MONDO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dengue disease","termid":"MONDO:0005502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asymptomatic dengue","secondary_identifiers":["DOID:0050143"],"termid":"MONDO:0000259","xrefs":{"Monarch":{"xref_id":"0000259"}}}


id: PBO:0071723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 21","termid":"PBO:0071723"}


id: PBO:0058212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4504","termid":"PBO:0058212"}


id: GO:0061427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter and stops, prevents or reduces the frequency, rate or extent of a ceramide biosynthetic process.","definition_xrefs":["PMID:15302821","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter (obsolete GO:0061427)","termid":"GO:0061427"}


id: PBO:0068560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 11, pseudogene","termid":"PBO:0068560"}


id: PR:O42968
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1E8.03c gene.","definition_xrefs":["UniProtKB:O42968","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1E8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1E8.03c","synonyms":[{"name":"Spom972h-SPBC1E8.03c","type":"exact"}],"termid":"PR:O42968"}


id: PR:P30316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc6 gene.","definition_xrefs":["UniProtKB:P30316","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.04","synonyms":[{"name":"DNA polymerase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cdc6","type":"exact"}],"termid":"PR:P30316"}


id: GO:0060438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a trachea over time, from its formation to the mature structure. The trachea is the portion of the airway that attaches to the bronchi as it branches.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea development","termid":"GO:0060438"}


id: GO:0052436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the symbiont calcium-dependent protein kinase signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont calcium-dependent protein kinase pathway (obsolete GO:0052436)","synonyms":[{"name":"modulation by organism of defense-related symbiont CDPK pathway","type":"exact"},{"name":"modulation by organism of defense-related symbiont calcium-dependent protein kinase pathway","type":"exact"}],"termid":"GO:0052436"}


id: PATO:0002453
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer bring gradually worn away.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eroding","termid":"PATO:0002453"}


id: GO:1901552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell development.","definition_xrefs":["PMID:19470579","GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of endothelial cell development","termid":"GO:1901550"},{"relation_name":"positively_regulates","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell development","synonyms":[{"name":"activation of endothelial cell development","type":"narrow"},{"name":"up regulation of endothelial cell development","type":"exact"},{"name":"up-regulation of endothelial cell development","type":"exact"},{"name":"upregulation of endothelial cell development","type":"exact"}],"termid":"GO:1901552"}


id: MONDO:0056822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotonia congenita","secondary_identifiers":["MEDGEN:8042","UMLS:C0002735","OMIM:205000"],"synonyms":[{"name":"Oppenheim disease","type":"related"},{"name":"amyotonia congenita","type":"exact"}],"termid":"MONDO:0056822","xrefs":{"Monarch":{"xref_id":"0056822"}}}


id: MONDO:1010098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital heart disease caused by pathogenic variation(s) in the TFAP2B gene, which encodes the transcription factor AP-2β. This disorder is characterized by patent ductus arteriosus, facial dysmorphism and hand anomalies. Additional features include sensorineural hearing loss, scoliosis, dental anomalies, and central diabetes insipidus. Given the spectrum of symptoms associated with this condition, patients may exhibit a combination of these features. The underlying mechanism of the spectrum disorder is both dominant negative and loss-of-function. Pathogenic missense variants reported in Char syndrome patients appear to be dominant negative while loss-of-function alleles in PDA patients are likely to act through haploinsufficiency.","definition_xrefs":["Orphanet:46627","PMID:31012281","Orphanet:466729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"TFAP2B-related congenital heart disease spectrum disorder","synonyms":[{"name":"TFAP2B-related PDA and Char syndrome spectrum disorder","type":"exact"}],"termid":"MONDO:1010098","xrefs":{"Monarch":{"xref_id":"1010098"}}}


id: PBO:0061949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OR2A1 antisense RNA 1","termid":"PBO:0061949"}


id: MONDO:0044651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"},{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"},{"relation_name":"is_a","term_name":"autosomal recessive degenerative and progressive cerebellar ataxia","termid":"MONDO:0020046"},{"relation_name":"is_a","term_name":"cerebellar degeneration","termid":"MONDO:0022687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0005244","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"early-onset progressive encephalopathy-spastic ataxia-distal spinal muscular atrophy syndrome","secondary_identifiers":["UMLS:C5567451","MEDGEN:1798874","Orphanet:496756","GARD:17914"],"termid":"MONDO:0044651","xrefs":{"Monarch":{"xref_id":"0044651"}}}


id: MONDO:0009852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital intrinsic factor deficiency (IFD) is a rare disorder of vitamin B12 (cobalamin) absorption that is characterized by megaloblastic anemia and neurological abnormalities.","definition_xrefs":["Orphanet:332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited deficiency anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005066","MONDO:0002280"],"is_obsolete":false,"name":"hereditary intrinsic factor deficiency","secondary_identifiers":["UMLS:C1394891","MEDGEN:235598","ICD9:281.3","MedDRA:10070440","DOID:0050734","MESH:C563242","GARD:3024","OMIM:261000","SCTID:60504009","SCTID:34925000"],"synonyms":[{"name":"IFD","type":"exact"},{"name":"congenital intrinsic factor deficiency","type":"exact"},{"name":"congenital pernicious anaemia","type":"exact"},{"name":"congenital pernicious anaemia due to defect of intrinsic factor","type":"related"},{"name":"congenital pernicious anemia","type":"exact"},{"name":"congenital pernicious anemia due to defect of intrinsic factor","type":"related"},{"name":"gastric intrinsic factor deficiency","type":"exact"},{"name":"hereditary juvenile megaloblastic anaemia due to intrinsic factor deficiency","type":"exact"},{"name":"hereditary juvenile megaloblastic anemia due to intrinsic factor deficiency","type":"exact"},{"name":"intrinsic factor deficiency","type":"broad"},{"name":"intrinsic factor, congenital deficiency of","type":"related"},{"name":"pernicious Anemia, congenital, due to defect of intrinsic Factor","type":"related"}],"termid":"MONDO:0009852","xrefs":{"Monarch":{"xref_id":"0009852"}}}


id: MONDO:0020073
data:
  {"annotated_genes":["SJAG_00824","SJAG_02765","SJAG_01184"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024556"},{"annotations":[86936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014924"},{"annotations":[86935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014925"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy syndrome","termid":"MONDO:0015650"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00824":null,"SJAG_01184":null,"SJAG_02765":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"adolescent-onset epilepsy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19438","MEDGEN:1842874","Orphanet:98260","UMLS:C5681525"],"termid":"MONDO:0020073","terms_by_termid":{"MONDO:0014924":null,"MONDO:0014925":null,"MONDO:0024556":null},"xrefs":{"Monarch":{"xref_id":"0020073"}}}


id: PBO:0090425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate acyltransferase","termid":"PBO:0090425"}


id: GO:0042947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glucosides from one side of a membrane to the other. Glucosides are glycosides in which the sugar group is a glucose residue.","definition_xrefs":["GOC:jl","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}


id: PBO:0078825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-8","termid":"PBO:0078825"}


id: GO:0072530
data:
  {"annotated_genes":["SJAG_04328","SJAG_03452","SJAG_02050","SJAG_04325","SJAG_00760","SJAG_00612","SJAG_03334","SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[112337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"},{"annotations":[112338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[63670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[101157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[101158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[58923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[102649,58922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[70279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[114942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140140"},{"annotations":[92701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The process in which a purine-containing compound is transported across a membrane. A purine-containing compound is any compound that contains purine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03777":null,"SJAG_04325":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"purine-containing compound transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-2161517"],"synonyms":[{"name":"purine-containing compound membrane transport","type":"exact"}],"termid":"GO:0072530","terms_by_termid":{"GO:0035348":null,"GO:0098702":null,"GO:0098710":null,"GO:0140021":null,"GO:0140140":null,"GO:1903790":null,"GO:1990544":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null}}


id: PBO:0031823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_modification","termid":"PBO:0031823"}


id: MONDO:0044283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete body mass index quantitative trait locus 18 (obsolete MONDO:0044283)","secondary_identifiers":["OMIM:615457"],"synonyms":[{"name":"BMIQ18","type":"related"},{"name":"body MASS index quantitative trait locus 18","type":"related"},{"name":"obesity, susceptibility to","type":"related"},{"name":"obesity, susceptibility to, BMIQ18","type":"exact"}],"termid":"MONDO:0044283","xrefs":{"Monarch":{"xref_id":"0044283"}}}


id: PBO:0072131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 8","termid":"PBO:0072131"}


id: MONDO:0007634
data:
  {"annotated_genes":["SJAG_00982","SJAG_03731"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84837,84838],"is_not":false,"summary":null,"term":"MONDO:0007634"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00982":null,"SJAG_03731":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, FRA12A type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:369613","OMIM:136630","UMLS:C1969893","MESH:C566980"],"synonyms":[{"name":"intellectual disability, FRA12A type","type":"exact"},{"name":"mental retardation, FRA12A type","type":"related"}],"termid":"MONDO:0007634","terms_by_termid":{"MONDO:0007634":null},"xrefs":{"Monarch":{"xref_id":"0007634"}}}


id: GO:0032628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-24 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-24 production","secondary_identifiers":["GO:0072622","GO:0045524"],"synonyms":[{"name":"IL-24 production","type":"exact"},{"name":"MDA7 production","type":"narrow"},{"name":"ST16 production","type":"narrow"},{"name":"interleukin-24 biosynthetic process","type":"narrow"},{"name":"interleukin-24 secretion","type":"narrow"}],"termid":"GO:0032628"}


id: GO:0017040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acylsphing-4-enine + H2O = a fatty acid + sphing-4-enine.","definition_xrefs":["RHEA:20856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acylsphingosine amidohydrolase activity","secondary_identifiers":["Reactome:R-HSA-428231","EC:3.5.1.23","Reactome:R-HSA-1606583","Reactome:R-HSA-428205","Reactome:R-HSA-1606602","MetaCyc:CERAMIDASE-RXN"],"synonyms":[{"name":"acylsphingosine deacylase activity","type":"related"},{"name":"ceramidase activity","type":"narrow"},{"name":"glycosphingolipid ceramide deacylase","type":"broad"}],"termid":"GO:0017040"}


id: PBO:0031839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_shmoo_morphology","termid":"PBO:0031839"}


id: GO:0071176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch2 (ICN2), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN2 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch2 complex","type":"exact"}],"termid":"GO:0071176"}


id: PBO:0028560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoskeleton_during_vegetative_growth","termid":"PBO:0028560"}


id: MONDO:0007762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe type of hyperlipidemia, sometimes familial, that is characterized by the elevation of both plasma chylomicrons and triglycerides contained in very-low-density lipoproteins. Type V hyperlipoproteinemia is often associated with diabetes mellitus and is not caused by reduced lipoprotein lipase activity as in hyperlipoproteinemia type I.","definition_xrefs":["MESH:D006954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperlipidemia","termid":"MONDO:0001336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"hyperlipoproteinemia type V","secondary_identifiers":["GARD:6704","MedDRA:10060755","OMIM:144650","Orphanet:70470","SCTID:34349009","UMLS:C0020481","DOID:1171","MEDGEN:5693","Orphanet:530849","DOID:0111421"],"synonyms":[{"name":"Fredrickson type V lipaemia","type":"exact"},{"name":"HLP type 5","type":"exact"},{"name":"familial APOA5 deficiency","type":"exact"},{"name":"familial apolipoprotein A-V deficiency","type":"exact"},{"name":"familial apolipoprotein a5 deficiency","type":"exact"},{"name":"familial hyperlipoproteinemia type V","type":"exact"},{"name":"familial type 5 hyperlipoproteinemia","type":"exact"},{"name":"hyperchylomicronemia late onset","type":"related"},{"name":"hyperchylomicronemia with Hyperprebetalipoproteinemia, familial","type":"related"},{"name":"hyperchylomicronemia, late-onset","type":"related"},{"name":"hyperlipemia combined fat and carbohydrate-induced","type":"related"},{"name":"hyperlipemia mixed","type":"related"},{"name":"hyperlipemia, combined fat and carbohydrate-induced","type":"related"},{"name":"hyperlipemia, mixed","type":"related"},{"name":"hyperlipidemia type V","type":"related"},{"name":"hyperlipidemia, type 5","type":"related"},{"name":"hyperlipoproteinemia type 5","type":"related"},{"name":"hyperlipoproteinemia, type 5","type":"related"},{"name":"hyperlipoproteinemia, type V","type":"related"},{"name":"major hyperlipidemia","type":"exact"},{"name":"mixed hyperlipemia","type":"related"},{"name":"type V hyperlipoproteinemia","type":"related"}],"termid":"MONDO:0007762","xrefs":{"Monarch":{"xref_id":"0007762"}}}


id: PBO:0034747
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-translationally cleaved tandem fusion","termid":"PBO:0034747"}


id: PBO:0046361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha pseudogene 3","termid":"PBO:0046361"}


id: PR:O59699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36.02c gene.","definition_xrefs":["UniProtKB:O59699","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C36.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.02c","synonyms":[{"name":"Spom972h-SPBC36.02c","type":"exact"}],"termid":"PR:O59699"}


id: MONDO:0033946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Forms of hereditary angioedema that occur due to mutations in the gene for complement C1 inhibitor protein. Type I hereditary angioedema is associated with reduced serum levels of complement C1 inhibitor protein. Type II hereditary angioedema is associated with the production of a non-functional complement C1 inhibitor protein.","definition_xrefs":["MESH:D056829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"},{"relation_name":"is_a","term_name":"serpinopathy","termid":"MONDO:0027749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary angioedema with C1Inh deficiency","secondary_identifiers":["GARD:22194","MEDGEN:1812520","OMIM:106100","Orphanet:528623","UMLS:C4552294","DOID:0080939"],"synonyms":[{"name":"C1 esterase inhibitor, deficiency of","type":"related"},{"name":"HAE1","type":"related"},{"name":"angioedema, hereditary, 1 and 2","type":"exact"},{"name":"angioedema, hereditary, type 1","type":"related"},{"name":"angioedema, hereditary, type 1/2","type":"exact"},{"name":"angioedema, hereditary, type 2","type":"related"},{"name":"angioedema, hereditary, type I","type":"related"},{"name":"angioneurotic edema, hereditary","type":"related"}],"termid":"MONDO:0033946","xrefs":{"Monarch":{"xref_id":"0033946"}}}


id: GO:1903425
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78879],"is_not":false,"summary":null,"term":"GO:1903425"}]},"cv_name":"molecular_function","definition":"Enables the transfer of fluoride from one side of a membrane to the other.","definition_xrefs":["PMID:24173035","GOC:TermGenie","GO_REF:0000070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"fluoride transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1903425","terms_by_termid":{"GO:1903425":null}}


id: SO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified phenylalanine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_phenylalanine","secondary_identifiers":["MOD:00914"],"synonyms":[{"name":"ModPhe","type":"exact"},{"name":"modified L phenylalanine","type":"exact"},{"name":"modified L-phenylalanine","type":"exact"}],"termid":"SO:0001397"}


id: PBO:0070482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 17","termid":"PBO:0070482"}


id: GO:0140495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell migration-dependent mechanism for releasing cellular contents.","definition_xrefs":["PMID:25342562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"export from cell","termid":"GO:0140352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"migracytosis","termid":"GO:0140495"}


id: PBO:0004113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv41 (predicted)","termid":"PBO:0004113"}


id: PBO:0091773
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae CDC6","termid":"PBO:0091773"}


id: GO:0007619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism for the purpose of attracting sexual partners.","definition_xrefs":["GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating behavior","termid":"GO:0007617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"courtship behavior","synonyms":[{"name":"courtship behaviour","type":"exact"}],"termid":"GO:0007619"}


id: PBO:0048554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine--fructose-6-phosphate transaminase 1","termid":"PBO:0048554"}


id: MONDO:0000090
data:
  {"annotated_genes":["SJAG_02658","SJAG_06022","SJAG_04816","SJAG_04665","SJAG_04183","SJAG_02050","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[86331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[84963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[85333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"},{"annotations":[86146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"},{"annotations":[84925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[86217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020845"},{"annotations":[85859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957993"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia","termid":"MONDO:0005181"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02050":null,"SJAG_02658":null,"SJAG_04183":null,"SJAG_04665":null,"SJAG_04816":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:157640"],"synonyms":[{"name":"progressive external ophthalmoplegia with mtDNA deletions","type":"exact"}],"termid":"MONDO:0000090","terms_by_termid":{"MONDO:0009783":null,"MONDO:0012238":null,"MONDO:0013117":null,"MONDO:0014062":null,"MONDO:0014656":null,"MONDO:0020845":null,"MONDO:0024528":null,"MONDO:0957993":null},"xrefs":{"Monarch":{"xref_id":"0000090"}}}


id: GO:0031285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sorocarp stalk cell differentiation. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:mtg_sensu","GOC:kp","PMID:4338436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"sorocarp stalk cell differentiation","termid":"GO:0031149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sorocarp stalk cell differentiation","synonyms":[{"name":"regulation of stalk cell differentiation","type":"exact"}],"termid":"GO:0031285"}


id: GO:0036192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxyindolin-2-one + O2 + reduced [NADPH--hemoprotein reductase] = 2-hydroxy-2H-1,4-benzoxazin-3(4H)-one + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxyindolin-2-one monooxygenase activity","secondary_identifiers":["EC:1.14.14.109","KEGG_REACTION:R07422"],"synonyms":[{"name":"3-hydroxyindolin-2-one,NAD(P)H:oxygen oxidoreductase (2-hydroxy-2H-1,4-benzoxazin-3(4H)-one-forming)","type":"related"}],"termid":"GO:0036192"}


id: GO:0044311
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense granule-like organelle of the apical complex of merozoites, released into the parasitophorous vacuole, mediating protease-dependent rupture and parasite exit from the infected erythrocyte.","definition_xrefs":["GOC:jl","PMID:18083092","PMID:18083098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"exoneme","termid":"GO:0044311"}


id: MOD:00361
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an S-adenosylmethionine and a four-iron four-sulfur cluster to tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0356","PubMed:14704425","PubMed:11222759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S-S-AdoMet)","type":"exact"},{"name":"tetra-mu3-sulfido(S-adenosylmethion-N,O-diyliron)tris(S-cysteinyliron)","type":"exact"},{"name":"tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00361"}


id: SO:0001713
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 20th residue (a lysine), from the start of the H4histone protein is mono-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K20_monomethylation_site","synonyms":[{"name":"H4K20 mono-methylation site","type":"exact"},{"name":"H4K20Me1","type":"related"}],"termid":"SO:0001713"}


id: PBO:0055524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2958","termid":"PBO:0055524"}


id: GO:0140211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: folic acid(out) + H+(out) = folic acid(in) + H+(in). The main folic acid symporter is the Proton-Coupled Folate Transporter (PCFT/SLC46A1), which has similar affinity for transport of reduced folates (5-methyl THF, 5-formyl THF) and folic acid.","definition_xrefs":["PMID:24745983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid transmembrane transporter activity","termid":"GO:0008517"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"folic acid:proton symporter activity","secondary_identifiers":["TC:2.A.1.50.1"],"termid":"GO:0140211"}


id: GO:0031999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of fatty acid beta-oxidation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid beta-oxidation","termid":"GO:0031998"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid oxidation","termid":"GO:0046322"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"negatively_regulates","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"negative regulation of fatty acid beta-oxidation","synonyms":[{"name":"down regulation of fatty acid beta-oxidation","type":"exact"},{"name":"down-regulation of fatty acid beta-oxidation","type":"exact"},{"name":"downregulation of fatty acid beta-oxidation","type":"exact"},{"name":"inhibition of fatty acid beta-oxidation","type":"narrow"}],"termid":"GO:0031999"}


id: FYPO:0005917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA derived from subtelomeric heterochromatin regions is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:25798942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"increased subtelomeric heterochromatin RNA level","synonyms":[{"name":"accumulation of subtelomere-derived RNA transcripts","type":"related"},{"name":"increased transcription at subtelomere","type":"narrow"},{"name":"increased transcription at subtelomeric heterochromatin during vegetative growth","type":"narrow"}],"termid":"FYPO:0005917"}


id: GO:0005335
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: serotonin(out) + Na+(out) + Cl-(out) = serotonin(in) + Na+(in)+ Cl-(in).","definition_xrefs":["PMID:22519513","PMID:21752877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoamine transmembrane transporter activity","termid":"GO:0008504"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"serotonin:sodium:chloride symporter activity","secondary_identifiers":["GO:0015222","GO:0005336","TC:2.A.22.1.1","Reactome:R-HSA-444008","RHEA:51196"],"synonyms":[{"name":"serotonin transmembrane transporter activity","type":"exact"},{"name":"serotonin:sodium symporter activity","type":"related"},{"name":"sodium/serotonin symporter activity","type":"exact"}],"termid":"GO:0005335"}


id: GO:0004198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0008233","GO:0003674","GO:0003824","GO:0140096","GO:0016787"],"is_obsolete":false,"name":"calcium-dependent cysteine-type endopeptidase activity","secondary_identifiers":["Reactome:R-HSA-9855106","Reactome:R-HSA-8848658","Reactome:R-HSA-9861485","Reactome:R-HSA-8863012"],"synonyms":[{"name":"calpain activity","type":"narrow"}],"termid":"GO:0004198"}


id: PBO:0088754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate decarboxylase","termid":"PBO:0088754"}


id: PR:P87147
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nascent polypeptide-associated complex subunit alpha-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03638","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.05","secondary_identifiers":["UniProtKB:P87147"],"synonyms":[{"name":"NAC-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NACA2","type":"exact"},{"name":"alpha-NAC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87147"}


id: PR:Q9P6L8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6L8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.08","synonyms":[{"name":"Spom972h-srb8","type":"exact"},{"name":"mediator complex subunit 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B srb8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6L8"}


id: GO:0075271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fruiting body called zygosporangium is formed. A zygosporangium is a thick-walled structure in which spores are produced, and is characteristic of the Zygomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygosporangium development","termid":"GO:0075271"}


id: PBO:0043200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemokine like factor","termid":"PBO:0043200"}


id: PBO:0058010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3936 host gene","termid":"PBO:0058010"}


id: SO:0002380
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for pseudouridylation_guide_snoRNA. A snoRNA that specifies the site of pseudouridylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H_ACA_box_snoRNA_gene","termid":"SO:0002376"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridylation_guide_snoRNA_gene","synonyms":[{"name":"pseudouridylation guide snoRNA gene","type":"exact"}],"termid":"SO:0002380"}


id: GO:0102884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = zingiberene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"alpha-zingiberene synthase activity","secondary_identifiers":["MetaCyc:RXN-8425","RHEA:28643"],"termid":"GO:0102884"}


id: MONDO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm characterized by a papillary growth pattern and a proliferation of neoplastic squamous cells without morphologic evidence of malignancy. Most frequently it arises in the oral cavity, nasopharynx, larynx, esophagus, vagina, and vulva.","definition_xrefs":["NCIT:C3712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squamous papilloma","secondary_identifiers":["EFO:1001970","UMLS:C0205874","DOID:139","MEDGEN:61470","ICDO:8052/0"],"synonyms":[{"name":"epidermoid cell papilloma","type":"exact"},{"name":"epidermoid papilloma","type":"exact"},{"name":"keratotic papilloma","type":"exact"},{"name":"papilloma, squamous cell, benign","type":"exact"},{"name":"squamous cell papilloma","type":"exact"},{"name":"squamous cell papilloma (morphologic abnormality)","type":"exact"},{"name":"squamous papilloma","type":"exact"}],"termid":"MONDO:0001825","xrefs":{"Monarch":{"xref_id":"0001825"}}}


id: MONDO:1010802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly, non-human animal","termid":"MONDO:1010156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, pig","secondary_identifiers":["OMIA:000146-9823"],"termid":"MONDO:1010802","xrefs":{"Monarch":{"xref_id":"1010802"}}}


id: PBO:0080779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related X-linked","termid":"PBO:0080779"}


id: PBO:0088738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex subunit Hip3","termid":"PBO:0088738"}


id: GO:0016920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the release of the N-terminal pyroglutamyl group from a peptide or protein.","definition_xrefs":["GOC:mah","PMID:9920379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0008233","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"pyroglutamyl-peptidase activity","termid":"GO:0016920"}


id: PBO:0079977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 15","termid":"PBO:0079977"}


id: GO:0004833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + O2 = N-formyl-L-kynurenine.","definition_xrefs":["EC:1.13.11.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tryptophan 2,3-dioxygenase activity","secondary_identifiers":["RHEA:24536","GO:0004426","MetaCyc:TRYPTOPHAN-23-DIOXYGENASE-RXN","Reactome:R-HSA-71188","Reactome:R-HSA-888614","Reactome:R-HSA-198563"],"synonyms":[{"name":"L-tryptophan 2,3-dioxygenase activity","type":"related"},{"name":"L-tryptophan pyrrolase activity","type":"related"},{"name":"L-tryptophan:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"TDO","type":"related"},{"name":"indolamine 2,3-dioxygenase activity","type":"broad"},{"name":"indoleamine-pyrrole 2,3-dioxygenase activity","type":"exact"},{"name":"tryptamin 2,3-dioxygenase activity","type":"related"},{"name":"tryptamine 2,3-dioxygenase activity","type":"related"},{"name":"tryptophan oxygenase activity","type":"broad"},{"name":"tryptophan peroxidase activity","type":"broad"},{"name":"tryptophan pyrrolase activity","type":"broad"}],"termid":"GO:0004833"}


id: PBO:0060779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B9 pseudogene 1","termid":"PBO:0060779"}


id: GO:0102459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-dADP + H2O = 8-oxo-dAMP + hydrogenphosphate + H+.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"8-oxo-dADP diphosphate phosphatase activity","secondary_identifiers":["MetaCyc:RXN-14005"],"synonyms":[{"name":"8-oxo-deoxyadenine diphosphate phosphatase activity","type":"exact"}],"termid":"GO:0102459"}


id: PBO:0058192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4485","termid":"PBO:0058192"}


id: PBO:0088899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fen1 family nuclease, XP-G family","termid":"PBO:0088899"}


id: PBO:0048675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLCCI1 divergent transcript","termid":"PBO:0048675"}


id: MONDO:0001612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A narrowing of the carotid artery lumen. It is usually caused by the formation of an atherosclerotic plaque. Symptoms are usually present when there is severe narrowing or obstruction of the arterial lumen and manifest as ischemic cerebrovascular accidents.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotid artery disorder","termid":"MONDO:0005269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carotid stenosis","secondary_identifiers":["MEDGEN:785","NCIT:C95804","MESH:D016893","ICD9:433.10","SCTID:64586002","UMLS:C0007282","DOID:13001","HP:0100546"],"synonyms":[{"name":"carotid artery stenosis","type":"exact"},{"name":"stenosis, carotid artery","type":"exact"}],"termid":"MONDO:0001612","xrefs":{"Monarch":{"xref_id":"0001612"}}}


id: GO:1904845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-glutamine stimulus.","definition_xrefs":["PMID:23185570","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to L-glutamine","termid":"GO:1904844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-glutamine","termid":"GO:1904845"}


id: PBO:0051282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-17","termid":"PBO:0051282"}


id: PR:P40383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5'-3' exoribonuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12341:SF7","OMA:SCHPO00728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.14","secondary_identifiers":["UniProtKB:P40383"],"synonyms":[{"name":"Exo II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-XRN1","type":"exact"},{"name":"exonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"exonuclease II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p140 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:P40383"}


id: PBO:0003089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic inhibitor kinase Mik1","termid":"PBO:0003089"}


id: PBO:0075931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST14 transmembrane serine protease matriptase","termid":"PBO:0075931"}


id: MONDO:0001652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma (disease) that involves the scrotum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scrotum neoplasm","termid":"MONDO:0003319"},{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scrotum melanoma","secondary_identifiers":["UMLS:C1331544","NCIT:C7361","DOID:13160","MEDGEN:233100"],"synonyms":[{"name":"melanoma (disease) of scrotum","type":"exact"},{"name":"melanoma of scrotum","type":"exact"},{"name":"melanoma of the scrotum","type":"exact"},{"name":"scrotal melanoma","type":"exact"},{"name":"scrotum melanoma (disease)","type":"exact"}],"termid":"MONDO:0001652","xrefs":{"Monarch":{"xref_id":"0001652"}}}


id: MONDO:0007087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any alternating hemiplegia of childhood in which the cause of the disease is a mutation in the ATP1A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alternating hemiplegia of childhood","termid":"MONDO:0016241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"alternating hemiplegia of childhood 1","secondary_identifiers":["MEDGEN:762361","GARD:15036","UMLS:C3549447","OMIM:104290"],"synonyms":[{"name":"AHC1","type":"related"},{"name":"ATP1A2 alternating hemiplegia of childhood","type":"exact"},{"name":"alternating hemiplegia of childhood 1","type":"exact"},{"name":"alternating hemiplegia of childhood caused by mutation in ATP1A2","type":"exact"},{"name":"alternating hemiplegia of childhood type 1","type":"exact"}],"termid":"MONDO:0007087","xrefs":{"Monarch":{"xref_id":"0007087"}}}


id: PBO:0109189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine beta-lyase","termid":"PBO:0109189"}


id: PBO:0047348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBRSL1 pseudogene 1","termid":"PBO:0047348"}


id: PBO:0091898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane hexose:proton symporter, unknown specificity Ght8","termid":"PBO:0091898"}


id: MONDO:0017166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of salivary glands (obsolete MONDO:0017166)","secondary_identifiers":["Orphanet:276142"],"termid":"MONDO:0017166","xrefs":{"Monarch":{"xref_id":"0017166"}}}


id: GO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of dehydroepiandrosterone (3beta-hydroxyandrost-5-en-17-one) into the circulatory system.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"dehydroepiandrosterone secretion","synonyms":[{"name":"3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"DHEA secretion","type":"exact"},{"name":"dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:0035942"}


id: PBO:0017957
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson disease","termid":"PBO:0017957"}


id: GO:0034456
data:
  {"annotated_genes":["SJAG_01799","SJAG_03931","SJAG_03617","SJAG_00142","SJAG_03156"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74401,75743,77928,78362,93534],"is_not":false,"summary":null,"term":"GO:0034456"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a subcomplex of the 90S preribosome. In S. cerevisiae, it is composed of Rrp7p, Utp22p, Ckb1p, Cka1p, Ckb2p and Cka2p.","definition_xrefs":["PMID:17515605","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01799":null,"SJAG_03156":null,"SJAG_03617":null,"SJAG_03931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0030684","GO:0005575","GO:0005730"],"is_obsolete":false,"name":"UTP-C complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Rrp7p-containing subcomplex of 90S preribosome","type":"exact"}],"termid":"GO:0034456","terms_by_termid":{"GO:0034456":null}}


id: PBO:0075733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 1","termid":"PBO:0075733"}


id: PBO:0075816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor cysteine rich family member with 5 domains","termid":"PBO:0075816"}


id: GO:0043279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkaloid stimulus. Alkaloids are a large group of nitrogenous substances found in naturally in plants, many of which have extracts that are pharmacologically active.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alkaloid","termid":"GO:0043279"}


id: GO:1904726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of replicative senescence.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:23496142","GOC:rph","GOC:BHF_miRNA","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of replicative senescence","termid":"GO:1904726"}


id: PATO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000213 neurobehavioral function (obsolete PATO:0000213)","termid":"PATO:0000213"}


id: GO:0019771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with high affinity with an immunoglobulin of an IgG isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgG receptor activity","termid":"GO:0019770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"high-affinity IgG receptor activity","synonyms":[{"name":"high affinity Fc receptor activity","type":"related"},{"name":"high affinity IgG receptor activity","type":"exact"}],"termid":"GO:0019771"}


id: MONDO:0060457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammation with arthritis and dyskeratosis","secondary_identifiers":["MEDGEN:1380109","OMIM:617388","UMLS:C4479278"],"synonyms":[{"name":"AIADK","type":"related"},{"name":"AUTOINFLAMMATION with arthritis and dyskeratosis","type":"related"}],"termid":"MONDO:0060457","xrefs":{"Monarch":{"xref_id":"0060457"}}}


id: PBO:0034494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2B-K119_ubiquitination_at_double-strand_break_site","termid":"PBO:0034494"}


id: PBO:0081044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3HC-type containing 1","termid":"PBO:0081044"}


id: PBO:0014296
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by N. tabacum Ran-AI","termid":"PBO:0014296"}


id: PBO:0005806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIB complex subunit Bdp1 (predicted)","termid":"PBO:0005806"}


id: MONDO:0010872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parotid salivary glands, polycystic dysgenetic disease of","secondary_identifiers":["UMLS:C3551133","MEDGEN:764047","OMIM:600343"],"synonyms":[{"name":"PDDP","type":"exact"},{"name":"parotid salivary glands, polycystic dysgenetic disease OF","type":"related"}],"termid":"MONDO:0010872","xrefs":{"Monarch":{"xref_id":"0010872"}}}


id: GO:0045093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to alpha subunit of interleukin-18. IL-18a is a component of IL-18 that is essential for IL-18 binding on the surface of T-helper 1 cells.","definition_xrefs":["PMID:10653850"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-18 alpha subunit binding (obsolete GO:0045093)","synonyms":[{"name":"IL-18Ra binding","type":"exact"}],"termid":"GO:0045093"}


id: GO:0006271
data:
  {"annotated_genes":["SJAG_05232","SJAG_02667","SJAG_04879","SJAG_00272","SJAG_02182","SJAG_00884","SJAG_04190","SJAG_00618","SJAG_02294","SJAG_02199","SJAG_04183","SJAG_01762","SJAG_05197","SJAG_01010","SJAG_00729","SJAG_03780","SJAG_00198","SJAG_01823","SJAG_05239","SJAG_00814","SJAG_04877","SJAG_03495","SJAG_00863","SJAG_02908","SJAG_04210","SJAG_02690","SJAG_00874","SJAG_02818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70708,73077,77204],"is_not":false,"summary":null,"term":"GO:0006271"},{"annotations":[109737,70097,112308,115199,113357,112067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[74691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006273"},{"annotations":[70104,74690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006272"},{"annotations":[95029,104020,108903,102621,104735,117981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[104736,93759,104021,95030,89362,106784,95061,107147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"},{"annotations":[101301,103946,100448,100414,94849,72146,92450],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"The process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand, complementary to an existing template, as part of DNA replication.","definition_xrefs":["GOC:mah","ISBN:0815316194","ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation","termid":"GO:0022616"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00272":null,"SJAG_00618":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02667":null,"SJAG_02690":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"DNA strand elongation involved in DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-69190"],"synonyms":[{"name":"DNA replication elongation","type":"exact"},{"name":"DNA strand elongation during DNA replication","type":"related"}],"termid":"GO:0006271","terms_by_termid":{"GO:0006271":null,"GO:0006272":null,"GO:0006273":null,"GO:1902983":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null}}


id: GO:0048682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in sprouting of an injured axon.","definition_xrefs":["GOC:jid","GOC:dph","GOC:lm","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sprouting of injured axon","termid":"GO:0048682"}


id: PBO:0053664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 841","termid":"PBO:0053664"}


id: MONDO:0018956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic bronchiectasis (IB) is a progressive lung disease characterized by chronic dilation of the bronchi and destruction of the bronchial walls in the absence of any underlying cause (such as post infectious disease, aspiration, immunodeficiency, congenital abnormalities and ciliary anomalies).","definition_xrefs":["Orphanet:60033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiectasis","termid":"MONDO:0004822"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic bronchiectasis","secondary_identifiers":["GARD:16664","MEDGEN:573462","SCTID:233629001","UMLS:C0339985"],"termid":"MONDO:0018956","xrefs":{"Monarch":{"xref_id":"0018956"}}}


id: GO:0034814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene-cis-7,8-dihydrodiol + O2 = cis-4-(7-hydroxypyren-8-yl)-2-oxobut-3-enoate.","definition_xrefs":["UM-BBD_reactionID:r1138"],"gene_count":0,"genotype_count":0,"name":"obsolete 7,8-dihydroxy benzo(a)pyrene dioxygenase activity (obsolete GO:0034814)","termid":"GO:0034814"}


id: PBO:0001691
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.1.-","termid":"PBO:0001691"}


id: PBO:0003594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 h3.2","termid":"PBO:0003594"}


id: FYPO:0000843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1,4-dithiothreitol (DTT). Cells stop growing (and may die) at a concentration of dithiothreitol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to dithiothreitol","synonyms":[{"name":"hypersensitive to dithiothreitol","type":"exact"},{"name":"sensitive to 1,4-dithiothreitol","type":"exact"},{"name":"sensitive to DTT","type":"exact"},{"name":"sensitive to dithiothreitol during mitotic cell cycle","type":"related"},{"name":"sensitive to dithiothreitol during vegetative growth","type":"exact"}],"termid":"FYPO:0000843"}


id: PBO:0058017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3943","termid":"PBO:0058017"}


id: PBO:0050470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA cluster antisense RNA 2","termid":"PBO:0050470"}


id: PBO:0082234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucosidase; weak, but broad substrate specificity for alpha-1,4- and alpha-1,6-glucosides; member of IMA isomaltase family; not required for isomaltose utilization, but Ima4p overexpression allows the ima1 null mutant to grow on isomaltose; identical to IMA3","termid":"PBO:0082234"}


id: PATO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Shape quality inhering in a bearer by virtue of the bearer's being shaped like a wing.","direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aliform","synonyms":[{"name":"wing-shaped","type":"exact"}],"termid":"PATO:0002236"}


id: GO:0099004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any signal transduction pathway involving calmodulin dependent kinase activity.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete calmodulin dependent kinase signaling pathway (obsolete GO:0099004)","synonyms":[{"name":"CAMK signaling pathway","type":"exact"}],"termid":"GO:0099004"}


id: GO:0106063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with folate and transmitting the signal from one side of the membrane to the other by activating an associated G-protein, initiating a change in cell activity.","definition_xrefs":["PMID:26906738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled folate receptor activity","synonyms":[{"name":"G-protein coupled folate receptor activity","type":"exact"},{"name":"G-protein coupled folic acid receptor activity","type":"exact"}],"termid":"GO:0106063"}


id: RO:0002340
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and c when p is a transportation or localization process and the outcome of this process is to move c to a destination that is part of some s, where the start location of c is part of the region that surrounds s.","direct_ancestors":[{"relation_name":"is_a","term_name":"transports","termid":"RO:0002020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imports","termid":"RO:0002340"}


id: PR:O74556
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC970.02 gene.","definition_xrefs":["UniProtKB:O74556","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase C970.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.02","synonyms":[{"name":"Spom972h-SPCC970.02","type":"exact"},{"name":"endo-alpha-1->6-D-mannanase C970.02 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74556"}


id: PBO:0068424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein with serine rich domain 1","termid":"PBO:0068424"}


id: MONDO:0005722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute upper respiratory airways infection that results in the swelling of the larynx. It is usually caused by parainfluenza viruses. Signs include a characteristic barking cough and stridor.","definition_xrefs":["NCIT:C26735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheitis","termid":"MONDO:0000263"},{"relation_name":"is_a","term_name":"bronchitis","termid":"MONDO:0003781"},{"relation_name":"is_a","term_name":"acute laryngitis","termid":"MONDO:0004777"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"croup","secondary_identifiers":["MEDGEN:3668","MESH:D003440","SCTID:71186008","DOID:9395","ICD9:464.4","UMLS:C0010380","EFO:0007227"],"synonyms":[{"name":"acute laryngotracheitis","type":"related"},{"name":"acute laryngotracheobronchitis","type":"exact"},{"name":"acute obstructive laryngitis","type":"exact"},{"name":"croup syndrome","type":"exact"}],"termid":"MONDO:0005722","xrefs":{"Monarch":{"xref_id":"0005722"}}}


id: GO:0042999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transport of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Golgi to plasma membrane CFTR protein transport (obsolete GO:0042999)","termid":"GO:0042999"}


id: PR:Q7LL04
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1494.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7LL04"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0676 protein C1494.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.01","synonyms":[{"name":"Spom972h-SPCC1494.01","type":"exact"}],"termid":"PR:Q7LL04"}


id: GO:0080056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vascular tissue pattern formation as it occurs in the petal of vascular plants.","definition_xrefs":["PMID:17369435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem and phloem pattern formation","termid":"GO:0010051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal vascular tissue pattern formation","termid":"GO:0080056"}


id: GO:0034216
data:
  {"annotated_genes":["SJAG_04673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100480],"is_not":false,"summary":null,"term":"GO:0034216"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: thiamine(out) + H+(out) = thiamine(in) + H+(in). In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine:proton symporter activity","termid":"GO:0034215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity thiamine:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high affinity thiamin:hydrogen symporter activity","type":"exact"},{"name":"high-affinity thiamin:hydrogen symporter activity","type":"exact"},{"name":"high-affinity thiamin:proton symporter activity","type":"exact"},{"name":"high-affinity thiamine:hydrogen symporter activity","type":"exact"}],"termid":"GO:0034216","terms_by_termid":{"GO:0034216":null}}


id: PBO:0046159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E74 like ETS transcription factor 1","termid":"PBO:0046159"}


id: MONDO:0022567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"bhaskar jagannathan syndrome","secondary_identifiers":["MESH:C535437","UMLS:C2930901","MEDGEN:419280"],"termid":"MONDO:0022567","xrefs":{"Monarch":{"xref_id":"0022567"}}}


id: PBO:0003579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm10/Mdm12/Mmm1 complex subunit Mmm1 (predicted)","termid":"PBO:0003579"}


id: GO:1905871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell leading edge.","definition_xrefs":["GOC:TermGenie","PMID:26324884","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cell leading edge","termid":"GO:1902463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell leading edge","synonyms":[{"name":"regulation of protein localisation in cell leading edge","type":"exact"},{"name":"regulation of protein localisation to cell leading edge","type":"exact"},{"name":"regulation of protein localization in cell leading edge","type":"exact"}],"termid":"GO:1905871"}


id: SO:0001487
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The status of a whole genome sequence, where overall coverage represents at least 90 percent of the genome.","definition_xrefs":["DOI:10.1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"whole_genome_sequence_status","termid":"SO:0001499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high_quality_draft","synonyms":[{"name":"high quality draft","type":"exact"}],"termid":"SO:0001487"}


id: GO:0106398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of R7 cell fate commitment.","definition_xrefs":["PMID:22878552","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"regulation of R7 cell fate commitment","termid":"GO:0106396"},{"relation_name":"negatively_regulates","term_name":"R7 cell fate commitment","termid":"GO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R7 cell fate commitment","termid":"GO:0106398"}


id: GO:1903923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein processing in phagocytic vesicle.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:23325791","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein processing","termid":"GO:0010954"},{"relation_name":"is_a","term_name":"regulation of protein processing in phagocytic vesicle","termid":"GO:1903921"},{"relation_name":"positively_regulates","term_name":"protein processing in phagocytic vesicle","termid":"GO:1900756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein processing in phagocytic vesicle","synonyms":[{"name":"activation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"activation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"activation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"narrow"},{"name":"activation of protein maturation by peptide bond cleavage in phagosome","type":"narrow"},{"name":"activation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"narrow"},{"name":"activation of protein maturation by peptide bond hydrolysis in phagosome","type":"narrow"},{"name":"activation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"activation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"activation of protein processing in phagocytic vesicle","type":"narrow"},{"name":"activation of protein processing in phagosome","type":"narrow"},{"name":"positive regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"positive regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"positive regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"positive regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"positive regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"positive regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"positive regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"positive regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"positive regulation of protein processing in phagosome","type":"exact"},{"name":"up regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"up regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"up regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"up regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"up regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"up regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"up regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"up regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"up regulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"up regulation of protein processing in phagosome","type":"exact"},{"name":"up-regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"up-regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"up-regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"up-regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"up-regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"up-regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"up-regulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein processing in phagosome","type":"exact"},{"name":"upregulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"upregulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"upregulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"upregulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"upregulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"upregulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"upregulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"upregulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"upregulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"upregulation of protein processing in phagosome","type":"exact"}],"termid":"GO:1903923"}


id: GO:0060016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a granulosa cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a granulosa cell fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"granulosa cell differentiation","termid":"GO:0060014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell development","termid":"GO:0060016"}


id: FYPO:0001236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cycloheximide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on cycloheximide","synonyms":[{"name":"normal cell population growth in presence of cycloheximide","type":"exact"},{"name":"normal cell population growth on cycloheximide","type":"exact"},{"name":"normal cellular response to cycloheximide","type":"related"},{"name":"normal vegetative cell population growth on cycloheximide","type":"exact"}],"termid":"FYPO:0001236"}


id: GO:0016897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of ester linkages within ribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 3' phosphomonoesters.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA exonuclease activity, producing 3'-phosphomonoesters (obsolete GO:0016897)","synonyms":[{"name":"exoribonuclease activity, producing 3'-phosphomonoesters","type":"exact"}],"termid":"GO:0016897"}


id: SO:0002149
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 15th residue (a lysine), from the start of the H2AZ histone protein is acetylated.","definition_xrefs":["PMID:24316985","PMID:19385636","PMID:27087541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2AZ_acetylation_site","termid":"SO:0002144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AZK15_acetylation_site","synonyms":[{"name":"H2A.ZK15ac","type":"exact"},{"name":"H2AZK15 acetylation site","type":"exact"},{"name":"H2AZK15ac","type":"exact"}],"termid":"SO:0002149"}


id: PBO:0013833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein A3","termid":"PBO:0013833"}


id: MONDO:0012146
data:
  {"annotated_genes":["SJAG_02572"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86101],"is_not":false,"summary":null,"term":"MONDO:0012146"}]},"cv_name":"mondo","definition":"Any genetic hemophagocytic lymphohistiocytosis in which the cause of the disease is a mutation in the UNC13D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial hemophagocytic lymphohistiocytosis 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537251","MEDGEN:332383","OMIM:608898","GARD:9928","DOID:0110923","UMLS:C1837174","NANDO:2200729"],"synonyms":[{"name":"FHL3","type":"exact"},{"name":"HLH3","type":"exact"},{"name":"HPLH3","type":"exact"},{"name":"Hlh3","type":"related"},{"name":"Hplh3","type":"related"},{"name":"UNC13D genetic hemophagocytic lymphohistiocytosis","type":"exact"},{"name":"familial hemophagocytic lymphohistiocytosis type 3","type":"exact"},{"name":"genetic hemophagocytic lymphohistiocytosis caused by mutation in UNC13D","type":"exact"},{"name":"hemophagocytic lymphohistiocytosis, familial, 3","type":"related"},{"name":"hemophagocytic lymphohistiocytosis, familial, type 3","type":"exact"}],"termid":"MONDO:0012146","terms_by_termid":{"MONDO:0012146":null},"xrefs":{"Monarch":{"xref_id":"0012146"}}}


id: GO:0098980
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense specialization of the presynaptic active zone cytoskeleton.","definition_xrefs":["GOC:dos","PMID:26780543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton of presynaptic active zone","termid":"GO:0048788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"presynaptic density","termid":"GO:0098980"}


id: FYPO:0006281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is decreased in centromeric regions.","definition_xrefs":["PMID:28977643","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic recombination","termid":"FYPO:0000482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic recombination at centromere","termid":"FYPO:0006281"}


id: PBO:0034561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_actomyosin_contractile_ring_contraction","termid":"PBO:0034561"}


id: CHEBI:69136
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latrunculin A","termid":"CHEBI:69136"}


id: PATO:0002270
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An increased number of physical objects that are accumulated within another physical object usually as a result of a failure to break down or remove objects in a timely manner.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"accumulation","termid":"PATO:0002269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased accumulation","synonyms":[{"name":"accumulated","type":"exact"}],"termid":"PATO:0002270"}


id: GO:0042251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of an established polarized larval imaginal disc epithelium.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of larval imaginal disc epithelium","termid":"GO:0016336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"maintenance of polarity of larval imaginal disc epithelium","termid":"GO:0042251"}


id: PBO:0056716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesenchyme homeobox 1","termid":"PBO:0056716"}


id: FYPO:0007551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased during a cellular response to hydroxyurea.","definition_xrefs":["PMID:19158664","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin during cellular response to hydroxyurea","synonyms":[{"name":"increased protein localisation to chromatin during cellular response to hydroxyurea","type":"exact"},{"name":"increased protein localization to chromatin during cellular response to HU","type":"exact"},{"name":"increased protein localization to chromatin during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0007551"}


id: MONDO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign breast neoplasm characterized by the proliferation of multiple papillomas.","definition_xrefs":["NCIT:C6977"],"gene_count":0,"genotype_count":0,"name":"obsolete breast papillomatosis (obsolete MONDO:0002063)","secondary_identifiers":["DOID:1634"],"synonyms":[{"name":"breast papillomatosis","type":"exact"},{"name":"papillomatosis of breast","type":"exact"},{"name":"papillomatosis of the breast","type":"exact"}],"termid":"MONDO:0002063","xrefs":{"Monarch":{"xref_id":"0002063"}}}


id: MONDO:0957572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 9","secondary_identifiers":["OMIM:620478","MEDGEN:1844414","UMLS:C5882678"],"termid":"MONDO:0957572","xrefs":{"Monarch":{"xref_id":"0957572"}}}


id: FYPO:0002770
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to spindle pole body","termid":"FYPO:0002769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to spindle pole body","synonyms":[{"name":"decreased protein localisation to spindle pole body","type":"exact"},{"name":"decreased protein localization to SPB","type":"exact"},{"name":"reduced protein localization to spindle pole body","type":"exact"}],"termid":"FYPO:0002770"}


id: MONDO:0009145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive ectodermal dysplasia characterized by multiple eyelid apocrine hidrocystomas, palmoplantar keratoderma, hypotrichosis, hypodontia and nail dystrophy.","definition_xrefs":["Orphanet:50944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"ectodermal dysplasia WNT10A related","termid":"MONDO:0100358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"SchC6pf-Schulz-Passarge syndrome","secondary_identifiers":["GARD:16649","ICD9:758.89","OMIM:224750","UMLS:C1857069","MESH:C565607","SCTID:700062000","MEDGEN:347366","DOID:0111647"],"synonyms":[{"name":"SCHOPF-Schulz-Passarge syndrome","type":"related"},{"name":"SChöPF-Schulz-Passarge syndrome","type":"related"},{"name":"SSPS","type":"exact"},{"name":"eccrine tumors with ectodermal dysplasia","type":"related"},{"name":"eccrine tumors-ectodermal dysplasia","type":"exact"},{"name":"eccrine tumours with ectodermal dysplasia","type":"related"},{"name":"keratosis palmoplantaris with cystic eyelids, hypodontia, and hypotrichosis","type":"related"},{"name":"keratosis palmoplantaris-cystic eyelids-hypodontia-hypotrichosis syndrome","type":"exact"},{"name":"palmoplantar hyperkeratosis-cystic eyelids-hypodontia-hypotrichosis syndrome","type":"exact"},{"name":"palmoplantar keratoderma-cystic eyelids-hypodontia-hypotrichosis syndrome","type":"exact"}],"termid":"MONDO:0009145","xrefs":{"Monarch":{"xref_id":"0009145"}}}


id: PBO:0060105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 6","termid":"PBO:0060105"}


id: GO:0036204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: abieta-7,13-dien-18-ol + NADPH + H+ + O2 = abieta-7,13-dien-18-al + NADP+ + 2 H2O. This is a two step reaction. The first step is: abieta-7,13-dien-18-ol + NADPH + H+ + O2 = abieta-7,13-dien-18,18-diol + + NADP+ + H2O. The second step is a spontaneous reaction: abieta-7,13-dien-18,18-diol = abieta-7,13-dien-18-al + H2O.","definition_xrefs":["EC:1.14.14.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"abieta-7,13-dien-18-ol hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R06354","MetaCyc:RXN-12799","RHEA:26221"],"termid":"GO:0036204"}


id: MONDO:0020947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild to severe infections of the eye and its adjacent structures (adnexa) by adult or larval protozoan or metazoan parasites.","definition_xrefs":["MESH:D015822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"},{"relation_name":"is_a","term_name":"eye infectious disorder","termid":"MONDO:0043885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"parasitic eye infection","secondary_identifiers":["MEDGEN:8752","ICD9:136.9","UMLS:C0015406","SCTID:312418006"],"synonyms":[{"name":"EYE INFECT PARASITIC","type":"related"},{"name":"Eye Infection, Parasitic","type":"related"},{"name":"Eye Infections, Parasitic","type":"related"},{"name":"Infection, Parasitic Eye","type":"related"},{"name":"Infection, Parasitic Ocular","type":"related"},{"name":"Infections, Parasitic Eye","type":"related"},{"name":"Infections, Parasitic Ocular","type":"related"},{"name":"OCULAR INFECT PARASITIC","type":"related"},{"name":"Ocular Infection, Parasitic","type":"related"},{"name":"Ocular Infections, Parasitic","type":"related"},{"name":"PARASITIC EYE INFECT","type":"related"},{"name":"Parasitic Eye Infection","type":"related"},{"name":"Parasitic Eye Infections","type":"related"},{"name":"Parasitic Ocular Infection","type":"related"},{"name":"Parasitic Ocular Infections","type":"related"},{"name":"Parasitic eye infection","type":"related"},{"name":"parasitic eye infection","type":"exact"}],"termid":"MONDO:0020947","xrefs":{"Monarch":{"xref_id":"0020947"}}}


id: PR:Q09742
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC12C2.01c gene.","definition_xrefs":["UniProtKB:Q09742","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12C2.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.01c","synonyms":[{"name":"Spom972h-SPBC12C2.01c","type":"exact"}],"termid":"PR:Q09742"}


id: GO:0061466
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the plasma membrane that contributes to the structure of a cell junction.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part of cell junction (obsolete GO:0061466)","termid":"GO:0061466"}


id: MONDO:0005181
data:
  {"annotated_genes":["SJAG_04183","SJAG_04665","SJAG_06022","SJAG_00885","SJAG_04816","SJAG_02658","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[86331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[84963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[85333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"},{"annotations":[86146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"},{"annotations":[84925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[86217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020845"},{"annotations":[85859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957993"}]},"cv_name":"mondo","definition":"A mitochondrial myopathy characterized by slowly progressive paralysis of the levator palpebrae, orbicularis oculi, and extraocular muscles. Ragged-red fibers and atrophy are found on muscle biopsy. Familial and sporadic forms may occur. Disease onset is usually in the first or second decade of life, and the illness slowly progresses until usually all ocular motility is lost. (From Adams et al., Principles of Neurology, 6th ed, p1422)","definition_xrefs":["MESH:D017246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"ophthalmoplegia","termid":"MONDO:0003425"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02050":null,"SJAG_02658":null,"SJAG_04183":null,"SJAG_04665":null,"SJAG_04816":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0002320","MONDO:0004069"],"is_obsolete":false,"name":"progressive external ophthalmoplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0002509","NANDO:1200174","HP:0000590","Orphanet:520820","icd11.foundation:1698427219","SCTID:46252003","ICD9:378.72","DOID:12558","MEDGEN:102439","GARD:4503","UMLS:C0162674","ICD10CM:H49.4"],"synonyms":[{"name":"chronic progressive external ophthalmoplegia","type":"related"},{"name":"chronic progressive external ophthalmoplegia [ambiguous]","type":"exact"},{"name":"progressive external ophthalmoplegia","type":"exact"}],"termid":"MONDO:0005181","terms_by_termid":{"MONDO:0009783":null,"MONDO:0012238":null,"MONDO:0013117":null,"MONDO:0014062":null,"MONDO:0014656":null,"MONDO:0020845":null,"MONDO:0024528":null,"MONDO:0957993":null},"xrefs":{"Monarch":{"xref_id":"0005181"}}}


id: PBO:0057857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3168","termid":"PBO:0057857"}


id: GO:0000123
data:
  {"annotated_genes":["SJAG_00676","SJAG_02066","SJAG_00184","SJAG_05282","SJAG_02990","SJAG_03599","SJAG_03776","SJAG_02927","SJAG_03752","SJAG_03145","SJAG_03668","SJAG_04274","SJAG_02385","SJAG_00087","SJAG_03792","SJAG_03628","SJAG_00783","SJAG_02165","SJAG_04793","SJAG_02629","SJAG_00641","SJAG_00545","SJAG_00411","SJAG_03036","SJAG_01711","SJAG_02458","SJAG_00349","SJAG_01009","SJAG_02541","SJAG_03230","SJAG_01658","SJAG_01475","SJAG_04097","SJAG_01385","SJAG_04613","SJAG_00187","SJAG_03579","SJAG_00584","SJAG_04815","SJAG_04355","SJAG_02773","SJAG_04205"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88214],"is_not":false,"summary":null,"term":"GO:0000123"},{"annotations":[90544,99475,105110,104226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036410"},{"annotations":[105111,106311,93747,107716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033100"},{"annotations":[77649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"},{"annotations":[78836,73485,103827,73549,72709,98759,104514,77272,106674,80010,79858,72605,78012,108854,75902,92166,67972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035267"},{"annotations":[66111,61982,73337,71395,76989,88278,91202,76519,103157,117360,63139,116074,75260,58031,73548,57800,70740,78719,73769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000124"},{"annotations":[58334,63141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046695"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses histone acetyltransferase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetyltransferase complex","termid":"GO:0031248"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00187":null,"SJAG_00349":null,"SJAG_00411":null,"SJAG_00545":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00676":null,"SJAG_00783":null,"SJAG_01009":null,"SJAG_01385":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_02066":null,"SJAG_02165":null,"SJAG_02385":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02629":null,"SJAG_02773":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03628":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_03792":null,"SJAG_04097":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04355":null,"SJAG_04613":null,"SJAG_04793":null,"SJAG_04815":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"histone acetylase complex","type":"exact"}],"termid":"GO:0000123","terms_by_termid":{"GO:0000123":null,"GO:0000124":null,"GO:0033100":null,"GO:0035267":null,"GO:0036410":null,"GO:0046695":null,"GO:1990467":null}}


id: GO:0090066
data:
  {"annotated_genes":["SJAG_00279","SJAG_04668","SJAG_04100","SJAG_02532","SJAG_01894","SJAG_02700","SJAG_00521","SJAG_01805","SJAG_04332","SJAG_01993","SJAG_03401","SJAG_03086","SJAG_02019","SJAG_04479","SJAG_02566","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75456,78956,92121,79854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[113712,95473,73279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006884"},{"annotations":[92199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009992"},{"annotations":[93597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045793"},{"annotations":[77085,79104,76554,67722,66844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[94338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008361"},{"annotations":[98233],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061387"}]},"cv_name":"biological_process","definition":"Any process that modulates the size of an anatomical structure.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_03401":null,"SJAG_03602":null,"SJAG_04100":null,"SJAG_04332":null,"SJAG_04479":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anatomical structure size","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090066","terms_by_termid":{"GO:0006884":null,"GO:0008361":null,"GO:0009992":null,"GO:0030833":null,"GO:0045793":null,"GO:0051016":null,"GO:0061387":null}}


id: MONDO:0958128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiolitis obliterans syndrome","termid":"MONDO:0015265"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-transplant-related bronchiolitis obliterans","secondary_identifiers":["UMLS:C5925142","MEDGEN:1863569","Orphanet:658612"],"termid":"MONDO:0958128","xrefs":{"Monarch":{"xref_id":"0958128"}}}


id: MONDO:0007499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear folding","secondary_identifiers":["OMIM:128500","UMLS:C1851901","MEDGEN:377546"],"synonyms":[{"name":"ear folding","type":"exact"}],"termid":"MONDO:0007499","xrefs":{"Monarch":{"xref_id":"0007499"}}}


id: GO:0031638
data:
  {"annotated_genes":["SJAG_04785","SJAG_02432","SJAG_01868"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87266,91616,97433],"is_not":false,"summary":null,"term":"GO:0031638"}]},"cv_name":"biological_process","definition":"The proteolytic processing of an inactive enzyme to an active form.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01868":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"zymogen activation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"zymogen activation by proteolytic cleavage","type":"exact"}],"termid":"GO:0031638","terms_by_termid":{"GO:0031638":null}}


id: GO:0043062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite.","definition_xrefs":["GOC:jl","GOC:dph","GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extracellular structure organization","synonyms":[{"name":"extracellular structure organisation","type":"exact"},{"name":"extracellular structure organization and biogenesis","type":"exact"}],"termid":"GO:0043062"}


id: PBO:0047982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member J, pseudogene","termid":"PBO:0047982"}


id: GO:0097246
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a catechin, a polyphenolic antioxidant plant metabolite with a flavonoid or flavan-3-ol structure.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavanol binding","termid":"GO:0097245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"catechin binding","termid":"GO:0097246"}


id: SO:0000967
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded, circular RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"double_stranded_RNA_chromosome","termid":"SO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_double_stranded_RNA_chromosome","synonyms":[{"name":"circular double stranded RNA chromosome","type":"exact"}],"termid":"SO:0000967"}


id: PBO:0044214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortactin","termid":"PBO:0044214"}


id: SO:0001074
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region that is localized outside of a lipid bilayer and outside of the cytoplasm.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extramembrane_polypeptide_region","termid":"SO:0001072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"non_cytoplasmic_polypeptide_region","secondary_identifiers":["BS:00144"],"synonyms":[{"name":"non cytoplasmic polypeptide region","type":"exact"},{"name":"non_cytoplasm_location","type":"exact"},{"name":"outside","type":"related"}],"termid":"SO:0001074"}


id: PBO:0058351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4724","termid":"PBO:0058351"}


id: PBO:0082808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of yeast cortical actin cytoskeleton; binds and cross links actin filaments; originally identified by its homology to calponin (contains a calponin-like repeat) but the Scp1p domain structure is more similar to transgelin","termid":"PBO:0082808"}


id: PBO:0003394
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human INT6","termid":"PBO:0003394"}


id: MONDO:0958323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with early-onset parkinsonism and behavioral abnormalities","secondary_identifiers":["OMIM:620747","MEDGEN:1857802","UMLS:C5935590"],"termid":"MONDO:0958323","xrefs":{"Monarch":{"xref_id":"0958323"}}}


id: PBO:0018275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVE domain (PUA-related) protein","termid":"PBO:0018275"}


id: MONDO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete split-hand/foot malformation with long bone deficiency (obsolete MONDO:0000174)","termid":"MONDO:0000174","xrefs":{"Monarch":{"xref_id":"0000174"}}}


id: MONDO:1012037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar Purkinje cell degeneration, non-human animal","termid":"MONDO:1011833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar Purkinje cell degeneration, dog","secondary_identifiers":["OMIA:000174-9615"],"termid":"MONDO:1012037","xrefs":{"Monarch":{"xref_id":"1012037"}}}


id: PBO:0062173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 16 pseudogene","termid":"PBO:0062173"}


id: MONDO:0859238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoalphalipoproteinemia, primary, 2","termid":"MONDO:0032766"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoalphalipoproteinemia, primary, 2, intermediate","secondary_identifiers":["MEDGEN:1801755","OMIM:619836","UMLS:C5677030"],"termid":"MONDO:0859238","xrefs":{"Monarch":{"xref_id":"0859238"}}}


id: FYPO:0006530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is abolished during prophase of the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to centromere during meiotic prophase II","synonyms":[{"name":"abolished protein localisation to centromere during meiotic prophase II","type":"exact"},{"name":"abolished protein localisation to centromere during prophase II","type":"exact"},{"name":"abolished protein localization to chromosome, centric region during meiotic prophase II","type":"exact"},{"name":"abolished protein localization to chromosome, centromeric region during meiotic prophase II","type":"exact"},{"name":"protein localization to centromere abolished during meiotic prophase II","type":"exact"}],"termid":"FYPO:0006530"}


id: PR:O42997
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27B12.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.07","synonyms":[{"name":"Spom972h-SPBC27B12.07","type":"exact"}],"termid":"PR:O42997"}


id: GO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA exon ligation process that rejoins two exons of a pre-tRNA which has had the intron removed.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exon ligation","termid":"GO:0000378"},{"relation_name":"part_of","term_name":"tRNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0006388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA exon ligation","termid":"GO:0000968"}


id: MONDO:0006945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing or occlusion of the renal artery or arteries. It is due usually to atherosclerosis; fibromuscular dysplasia; thrombosis; embolism, or external pressure. The reduced renal perfusion can lead to renovascular hypertension (hypertension, renovascular).","definition_xrefs":["MESH:D012078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal artery disease","termid":"MONDO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal artery obstruction","secondary_identifiers":["UMLS:C0035066","MEDGEN:48406","DOID:2972","EFO:1001150"],"termid":"MONDO:0006945","xrefs":{"Monarch":{"xref_id":"0006945"}}}


id: PBO:0031111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_reactive_oxygen_species_during_G0_phase","termid":"PBO:0031111"}


id: SO:0000532
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one V-gene, one D-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_J_cluster","synonyms":[{"name":"V D J cluster","type":"exact"},{"name":"V-D-J-CLUSTER","type":"exact"}],"termid":"SO:0000532"}


id: PBO:0113442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate adaptor for Cdc48p; ubiquitin regulatory X (UBX) and Ub-associated (UBA) domain-containing protein that acts as a substrate recruiting cofactor; K48-specific Ub chain binding protein involved in ER-associated degradation (ERAD); positively regulates Glc7p protein phosphatase activity to promote growth and mitotic progression in complex with Cdc48p; regulated by nuclear Ub-dependent degradation (INMAD pathway) independent of the Asi and Doa10 complexes; homolog of human p47 (NSFL1C)","termid":"PBO:0113442"}


id: GO:0072475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle, is received and converted into a molecular signal, contributing to a mitotic cell cycle spindle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in mitotic spindle checkpoint (obsolete GO:0072475)","synonyms":[{"name":"detection of stimulus involved in mitotic cell cycle spindle checkpoint","type":"exact"},{"name":"mitotic cell cycle spindle checkpoint sensor mechanism","type":"related"},{"name":"mitotic cell cycle spindle checkpoint sensor process","type":"related"},{"name":"sensing involved in mitotic cell cycle spindle checkpoint","type":"related"}],"termid":"GO:0072475"}


id: PBO:0059613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 25","termid":"PBO:0059613"}


id: PR:Q9UTE9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11038:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.03c","secondary_identifiers":["UniProtKB:Q9UTE9"],"synonyms":[{"name":"SPAC222.03c","type":"related"},{"name":"Spom972h-TIMM10","type":"exact"}],"termid":"PR:Q9UTE9"}


id: MONDO:0015612
data:
  {"annotated_genes":["SJAG_03375"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010359"}]},"cv_name":"mondo","definition":"Dent disease is a rare genetic renal tubular disease characterized by manifestations of proximal tubule dysfunction.","definition_xrefs":["Orphanet:1652"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"rickets","termid":"MONDO:0005520"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Dent disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10069199","DOID:0050699","OMIMPS:300009","NCIT:C123260","MESH:D057973","NORD:1040","SCTID:444645005","GARD:13105","icd11.foundation:1762998355","UMLS:C0878681","MEDGEN:168056"],"synonyms":[{"name":"Dent disease 1","type":"narrow"},{"name":"Dent disease 2","type":"narrow"},{"name":"Dent syndrome","type":"exact"},{"name":"Dent's disease","type":"exact"},{"name":"Dents disease","type":"related"},{"name":"X-linked recessive hypercalciuric hypophosphatemic rickets","type":"exact"},{"name":"X-linked recessive hypophosphatemic rickets","type":"exact"},{"name":"X-linked recessive nephrolithiasis","type":"exact"},{"name":"low-molecular-weight proteinuria with hypercalciuria and nephrocalcinosis","type":"exact"},{"name":"renal Fanconi syndrome with nephrocalcinosis and renal stones","type":"exact"}],"termid":"MONDO:0015612","terms_by_termid":{"MONDO:0010359":null},"xrefs":{"Monarch":{"xref_id":"0015612"}}}


id: PBO:0077805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 3","termid":"PBO:0077805"}


id: GO:0090442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the degradation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose catabolism in response to heat stress (obsolete GO:0090442)","synonyms":[{"name":"trehalose catabolic process in response to heat stress","type":"exact"}],"termid":"GO:0090442"}


id: GO:0015837
data:
  {"annotated_genes":["SJAG_03970","SJAG_02605","SJAG_03591","SJAG_04731","SJAG_05346","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072489"},{"annotations":[87879],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[91537,110333,98679,93131],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[91538,93132,98680],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[93133],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"The directed movement of amines, including polyamines, organic compounds containing one or more amino groups, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04731":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"amine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amine/polyamine transport","type":"related"}],"termid":"GO:0015837","terms_by_termid":{"GO:0072489":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: MONDO:0006847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplasms composed of lymphoid tissue, a lattice work of reticular tissue the interspaces of which contain lymphocytes. The concept does not refer to neoplasms located in lymphatic vessels.","definition_xrefs":["MESH:D018190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid neoplasm","termid":"MONDO:0005157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"malignant lymphatic vessel tumor","termid":"MONDO:0006847","xrefs":{"Monarch":{"xref_id":"0006847"}}}


id: SO:0002358
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a vault RNA.","definition_xrefs":["PMID:22926522","PMID:30773316","PMID:19298825","PMID:9535882","PMID:22058117","PMID:19491402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault_RNA_gene","termid":"SO:0002358"}


id: GO:0006005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-fucose (6-deoxy-L-galactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose biosynthetic process","termid":"GO:0042353"},{"relation_name":"is_a","term_name":"L-fucose metabolic process","termid":"GO:0042354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-fucose biosynthetic process","synonyms":[{"name":"L-fucose anabolism","type":"exact"},{"name":"L-fucose biosynthesis","type":"exact"},{"name":"L-fucose formation","type":"exact"},{"name":"L-fucose synthesis","type":"exact"}],"termid":"GO:0006005"}


id: MONDO:0009938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital pulmonary valve stenosis","termid":"MONDO:0017865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonic stenosis","secondary_identifiers":["OMIM:265500","GARD:10071","UMLS:C1956257","MEDGEN:408291","HP:0001642"],"synonyms":[{"name":"pulmonary stenosis","type":"exact"},{"name":"pulmonic stenosis","type":"exact"},{"name":"pulmonic stenosis (disease)","type":"exact"},{"name":"valvular pulmonic stenosis","type":"related"}],"termid":"MONDO:0009938","xrefs":{"Monarch":{"xref_id":"0009938"}}}


id: MONDO:0009897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult polyglucosan body disease (APBD) is a glycogen storage disease of adults characterized by progressive upper and lower motor neuron dysfunction, progressive neurogenic bladder and cognitive difficulties that can lead to dementia.","definition_xrefs":["Orphanet:206583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to glycogen branching enzyme deficiency","termid":"MONDO:0009292"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0005244"],"is_obsolete":false,"name":"adult polyglucosan body disease","secondary_identifiers":["UMLS:C1849722","OMIM:263570","NORD:1591","GARD:108","MESH:C564878","NANDO:2201163","MEDGEN:342338","SCTID:721099001"],"synonyms":[{"name":"APBD","type":"exact"},{"name":"APBN","type":"related"},{"name":"polyglucosan body disease, adult","type":"related"},{"name":"polyglucosan body disease, adult form","type":"related"},{"name":"polyglucosan body neuropathy, adult form","type":"related"}],"termid":"MONDO:0009897","xrefs":{"Monarch":{"xref_id":"0009897"}}}


id: PBO:0047372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO3 divergent transcript","termid":"PBO:0047372"}


id: GO:0103033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-lactose = beta-(1->6)-galactobiose.","definition_xrefs":["EC:5.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular acyltransferase activity","termid":"GO:0016867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"beta-galactosidase activity (lactose isomerization)","secondary_identifiers":["MetaCyc:RXN0-5363"],"termid":"GO:0103033"}


id: PBO:0047116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 163 member A","termid":"PBO:0047116"}


id: PBO:0049514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 21","termid":"PBO:0049514"}


id: PBO:0068607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 58, pseudogene","termid":"PBO:0068607"}


id: GO:0045851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pH","termid":"GO:0006885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pH reduction","synonyms":[{"name":"acidification","type":"exact"}],"termid":"GO:0045851"}


id: MONDO:0001732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the trigone of the urinary bladder.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigonitis","secondary_identifiers":["ICD9:595.3","UMLS:C1261278","ICD10CM:N30.3","DOID:13507","SCTID:74445007","MEDGEN:687797","icd11.foundation:1938116176","NCIT:C123175"],"synonyms":[{"name":"inflammation of trigone of urinary bladder","type":"exact"},{"name":"trigone of urinary bladder inflammation","type":"exact"}],"termid":"MONDO:0001732","xrefs":{"Monarch":{"xref_id":"0001732"}}}


id: FYPO:0003214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to glucose starvation","synonyms":[{"name":"normal protein phosphorylation during cellular response to glucose depletion","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose deprivation","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose limitation","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0003214"}


id: MONDO:0009869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pierre-Robin syndrome (or Pierre-Robin sequence) is characterized by triad of orofacial morphological anomalies consisting of retrognathism, glossoptosis and a posterior median velopalatal cleft.","definition_xrefs":["Orphanet:718"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated Pierre-Robin syndrome","secondary_identifiers":["UMLS:C0031900","icd11.foundation:136361299","NCIT:C85010","SCTID:4602007","MESH:D010855","NORD:1579","OMIM:261800","MEDGEN:19310","GARD:4347"],"synonyms":[{"name":"PRBNS","type":"related"},{"name":"Pierre Robin Sequence","type":"exact"},{"name":"Pierre Robin sequence","type":"related"},{"name":"Pierre Robin syndrome","type":"related"},{"name":"Pierre Robin syndrome skeletal dysplasia polydactyly","type":"related"},{"name":"Pierre Robin's sequence","type":"related"},{"name":"Pierre Robins sequence","type":"related"},{"name":"Pierre-Robin syndrome","type":"related"},{"name":"Robin sequence","type":"related"},{"name":"Robin syndrome, Pierre","type":"related"},{"name":"glossoptosis, micrognathia, and cleft palate","type":"related"},{"name":"isolated Pierre Robin sequence","type":"exact"},{"name":"isolated Pierre Robin syndrome","type":"related"},{"name":"isolated Pierre-Robin syndrome","type":"exact"},{"name":"sequence, Pierre Robin","type":"related"},{"name":"sequence, Pierre Robin's","type":"related"},{"name":"sequence, Robin","type":"related"},{"name":"syndrome, Pierre Robin","type":"related"},{"name":"syndrome, Pierre-Robin","type":"related"}],"termid":"MONDO:0009869","xrefs":{"Monarch":{"xref_id":"0009869"}}}


id: PBO:0079272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39C pseudogene 1","termid":"PBO:0079272"}


id: PBO:0079018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 1-1","termid":"PBO:0079018"}


id: GO:0051955
data:
  {"annotated_genes":["SJAG_03591","SJAG_03970","SJAG_05346","SJAG_00991","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[91537,98679,93131,110333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[93132,91538,98680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[93133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"regulates","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051955","terms_by_termid":{"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: MONDO:0011529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 13 (SCA13) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by onset in childhood marked by delayed motor and cognitive development followed by mild progression of cerebellar ataxia.","definition_xrefs":["Orphanet:98768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 13","secondary_identifiers":["MESH:C537195","MEDGEN:344297","OMIM:605259","icd11.foundation:1191033828","UMLS:C1854488","DOID:0050963","GARD:9611","SCTID:719209002"],"synonyms":[{"name":"SCA13","type":"exact"},{"name":"autosomal dominant cerebellar ataxia with intellectual disability","type":"related"},{"name":"autosomal dominant cerebellar ataxia with mental retardation","type":"related"},{"name":"cerebellar ataxia, autosomal dominant with intellectual disability","type":"related"},{"name":"cerebellar ataxia, autosomal dominant with mental retardation","type":"related"},{"name":"spinocerebellar ataxia 13","type":"related"},{"name":"spinocerebellar ataxia type 13","type":"exact"}],"termid":"MONDO:0011529","xrefs":{"Monarch":{"xref_id":"0011529"}}}


id: PBO:0027108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_heterochromatin_maintenance_involved_in_chromatin_silencing_at_centromere_outer_repeat","termid":"PBO:0027108"}


id: SO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A C-terminal tetrapeptide motif that mediates retention of a protein in (or retrieval to) the endoplasmic reticulum. In mammals the sequence is KDEL, and in fungi HDEL or DDEL.","definition_xrefs":["doi:10.1093/jxb/50.331.157","PMID:2077689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"ER_retention_signal","synonyms":[{"name":"ER retention signal","type":"exact"},{"name":"endoplasmic reticulum retention signal","type":"exact"}],"termid":"SO:0001806"}


id: PBO:0029052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation","termid":"PBO:0029052"}


id: PBO:0080361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 16 pseudogene","termid":"PBO:0080361"}


id: PBO:0055250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2677","termid":"PBO:0055250"}


id: MONDO:0011316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteosclerotic chondrodysplasia, lethal, with intracellular inclusions","secondary_identifiers":["MESH:C566378","OMIM:603393","MEDGEN:350298","UMLS:C1863920"],"synonyms":[{"name":"osteosclerotic chondrodysplasia, lethal, with intracellular inclusions","type":"exact"}],"termid":"MONDO:0011316","xrefs":{"Monarch":{"xref_id":"0011316"}}}


id: PBO:0081012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 46","termid":"PBO:0081012"}


id: MONDO:0018363
data:
  {"annotated_genes":["SJAG_03249"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013997"}]},"cv_name":"mondo","definition":"Focal facial dermal dysplasias (FFDD) are rare ectodermal dysplasias, characterized by congenital bitemporal (resembling forceps marks) or preauricular scar-like lesions associated with additional facial and or systematic manifestations. 4 types of FFDD are described (FFDD I to IV). FFDD types II and III present with a variable facial dysmorphism including distichiasis (upper lashes) or lacking eyelashes, and upward slanting and thinned lateral eyebrows with a flattened nasal bridge and full upper lip. FFDD types I and IV are infrequently associated with extra-cutaneous anomalies.","definition_xrefs":["Orphanet:398166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"focal facial dermal dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1200544726","MESH:C537068","UMLS:C2936827","MEDGEN:445408","OMIMPS:136500","GARD:8416"],"synonyms":[{"name":"FFDD","type":"exact"}],"termid":"MONDO:0018363","terms_by_termid":{"MONDO:0013997":null},"xrefs":{"Monarch":{"xref_id":"0018363"}}}


id: GO:0038106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to choriogonadotropin hormone, a heterodimer, with an alpha subunit identical to that of luteinizing hormone (LH), follicle-stimulating hormone (FSH) and thyroid-stimulating hormone (TSH), and a unique beta subunit.","definition_xrefs":["Wikipedia:Human_chorionic_gonadotropin","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"choriogonadotropin hormone binding","synonyms":[{"name":"chorionic gonadotrophin binding","type":"exact"},{"name":"chorionic gonadotropin binding","type":"exact"}],"termid":"GO:0038106"}


id: GO:0106094
data:
  {"annotated_genes":["SJAG_04558","SJAG_01538","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034993"},{"annotations":[96510,102609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A nuclear membrane protein complex which connects the nuclear outer and inner membranes together, and links thereby links the nuclear lumen to cytoplasmic microtubules.","definition_xrefs":["GOC:vw","PMID:19225124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane protein complex","termid":"GO:0106083"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nuclear membrane microtubule tethering complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106094","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: PBO:0057650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1244-3","termid":"PBO:0057650"}


id: GO:1902408
data:
  {"annotated_genes":["SJAG_03309","SJAG_00256","SJAG_00845","SJAG_02380","SJAG_01889","SJAG_01215","SJAG_00807","SJAG_01787","SJAG_02838","SJAG_03596","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88061,96114,108651,119094],"is_not":false,"summary":null,"term":"GO:1902408"},{"annotations":[119093],"is_not":true,"summary":null,"term":"GO:1902408"},{"annotations":[90562,103495,110559,119095],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[111170,87641,101188],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"}]},"cv_name":"biological_process","definition":"The process in which a contractile ring is positioned in a specific location during the mitotic cell cycle. This process is critical for both for both symmetric and asymmetric cell divisions.","definition_xrefs":["PMID:28162898","PMID:26553932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinesis, division site positioning","termid":"GO:0007105"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_01143":null,"SJAG_01215":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03309":null,"SJAG_03596":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"mitotic cytokinesis, division site positioning","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"mitotic cytokinesis, site selection","type":"exact"}],"termid":"GO:1902408","terms_by_termid":{"GO:1902408":null,"GO:1902472":null,"GO:1903617":null}}


id: GO:0003425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that sets the alignment of mitotic spindle relative to other cellular structures and contributes to oriented chondrocyte division in the growth plate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of mitotic spindle orientation","termid":"GO:0000132"},{"relation_name":"is_a","term_name":"cytoskeleton polarization involved in growth plate cartilage chondrocyte division","termid":"GO:0003426"},{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization involved in establishment of planar polarity","termid":"GO:0090176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007049","GO:0007163","GO:0007010","GO:0008150","GO:0051179","GO:0000226"],"is_obsolete":false,"name":"establishment of mitotic spindle orientation involved in growth plate cartilage chondrocyte division","termid":"GO:0003425"}


id: GO:0008694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-octaprenyl-4-hydroxy benzoate = 2-octaprenylphenol + CO2.","definition_xrefs":["MetaCyc:3-OCTAPRENYL-4-OHBENZOATE-DECARBOX-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity","secondary_identifiers":["GO:0019167","RHEA:27778","EC:4.1.1.98"],"synonyms":[{"name":"3-octaprenyl-4-hydroxybenzoate decarboxylase activity","type":"exact"},{"name":"3-polyprenyl 4-hydroxybenzoate decarboxylase activity","type":"exact"},{"name":"3-polyprenyl-4-hydroxybenzoate carboxy-lyase activity","type":"exact"},{"name":"PPHB decarboxylase activity","type":"exact"},{"name":"UbiD","type":"related"},{"name":"UbiX","type":"related"},{"name":"polyprenyl p-hydroxybenzoate decarboxylase activity","type":"exact"}],"termid":"GO:0008694"}


id: PBO:0061542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSUN5 pseudogene 2","termid":"PBO:0061542"}


id: GO:0016115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"},{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"terpenoid catabolic process","synonyms":[{"name":"terpenoid breakdown","type":"exact"},{"name":"terpenoid catabolism","type":"exact"},{"name":"terpenoid degradation","type":"exact"}],"termid":"GO:0016115"}


id: PBO:0046642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 23","termid":"PBO:0046642"}


id: PBO:0046998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A1","termid":"PBO:0046998"}


id: PBO:0038796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 2","termid":"PBO:0038796"}


id: MONDO:0850257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pancreatic adenocarcinoma that derives from epithelial cells originating in glandular tissue, which produce mucin.","definition_xrefs":["DOID:0080782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"pancreatic adenocarcinoma","termid":"MONDO:0006047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"mucinous pancreas adenocarcinoma","termid":"MONDO:0850257","xrefs":{"Monarch":{"xref_id":"0850257"}}}


id: GO:0009524
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The phragmoplast is a plant cell specific cytoplasmic structure composed of cytoskeletal polymers, membranes, and associated cytosolic proteins that functions as the focused secretory module for assembling the cell plate.","definition_xrefs":["PMID:28943203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"phragmoplast","secondary_identifiers":["Wikipedia:Phragmoplast"],"termid":"GO:0009524"}


id: PBO:0059222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 4, pseudogene","termid":"PBO:0059222"}


id: GO:0140357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of heme from inside the vacuole across the vacuolar membrane and into the cytosol.","definition_xrefs":["PMID:28193844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"heme transmembrane transport","termid":"GO:0035351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"heme export from vacuole to cytoplasm","termid":"GO:0140357"}


id: GO:0097138
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BAD and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BAD-BCL-2 complex","termid":"GO:0097138"}


id: GO:0018026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-lysine to form peptidyl-N6-methyl-L-lysine.","definition_xrefs":["RESID:AA0076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine methylation","termid":"GO:0018022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine monomethylation","termid":"GO:0018026"}


id: PBO:0076325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYP antisense RNA 1","termid":"PBO:0076325"}


id: GO:0015626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-diaminopimelate from one side of a membrane to the other. L-diaminopimelate is the L-enantiomer anion of 2,6-diaminoheptanedioic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0198506732","GOC:go_curators","GOC:mah","GOC:jsg","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-diaminopimelate transmembrane transporter activity","synonyms":[{"name":"L-diaminopimelate transporter activity","type":"broad"},{"name":"cystine/diaminopimelate porter activity","type":"narrow"}],"termid":"GO:0015626"}


id: PBO:0067457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 582, pseudogene","termid":"PBO:0067457"}


id: FYPO:0007008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase III is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0006386","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"normal transcription termination","termid":"FYPO:0007463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal termination of RNA polymerase III transcription","synonyms":[{"name":"normal RNA polymerase III transcription termination","type":"exact"},{"name":"normal termination of RNA polymerase III transcription during mitotic cell cycle","type":"related"},{"name":"normal termination of RNA polymerase III transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0007008"}


id: GO:1903511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving orotic acid.","definition_xrefs":["GOC:TermGenie","GOC:dph","GO_REF:0000068","PMID:10727948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"orotic acid metabolic process","synonyms":[{"name":"orotic acid metabolism","type":"exact"}],"termid":"GO:1903511"}


id: GO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell of the myocardium from one site to another that will contribute to heart jogging.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"heart jogging","termid":"GO:0003146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart jogging","termid":"GO:0003305"}


id: GO:0018668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybenzoate + H+ + NADPH + O2 = 3,4-dihydroxybenzoate + H2O + NADP+.","definition_xrefs":["EC:1.14.13.23","RHEA:11480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-hydroxybenzoate 4-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0153","MetaCyc:3-HYDROXYBENZOATE-4-MONOOXYGENASE-RXN","KEGG_REACTION:R01628"],"synonyms":[{"name":"3-hydroxybenzoate 4-hydroxylase activity","type":"exact"},{"name":"3-hydroxybenzoate,NADPH:oxygen oxidoreductase (4-hydroxylating)","type":"related"}],"termid":"GO:0018668"}


id: PBO:0078058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 48","termid":"PBO:0078058"}


id: PBO:0111952
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-NF-X1 zinc finger","termid":"PBO:0111952"}


id: GO:0021630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the olfactory nerve to attain its fully functional state. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:jid","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"olfactory nerve development","termid":"GO:0021553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve maturation","synonyms":[{"name":"CN I maturation","type":"exact"}],"termid":"GO:0021630"}


id: GO:0004831
data:
  {"annotated_genes":["SJAG_00243","SJAG_04473"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70488,78544],"is_not":false,"summary":null,"term":"GO:0004831"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + ATP + tRNA(Tyr) = L-tyrosyl-tRNA(Tyr) + AMP + diphosphate + 2 H+.","definition_xrefs":["EC:6.1.1.1","RHEA:10220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00243":null,"SJAG_04473":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"tyrosine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-380170","KEGG_REACTION:R02918","Reactome:R-HSA-379980","MetaCyc:TYROSINE--TRNA-LIGASE-RXN"],"synonyms":[{"name":"L-tyrosine-tRNA(Tyr) ligase (AMP-forming) activity","type":"related"},{"name":"L-tyrosine-tRNATyr ligase (AMP-forming)","type":"related"},{"name":"L-tyrosine:tRNATyr ligase (AMP-forming)","type":"related"},{"name":"tyrosine tRNA synthetase activity","type":"related"},{"name":"tyrosine translase activity","type":"related"},{"name":"tyrosine-transfer RNA ligase activity","type":"related"},{"name":"tyrosine-transfer ribonucleate synthetase activity","type":"related"},{"name":"tyrosyl-tRNA ligase activity","type":"related"},{"name":"tyrosyl-tRNA synthetase activity","type":"exact"},{"name":"tyrosyl-transfer RNA synthetase activity","type":"related"},{"name":"tyrosyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"tyrosyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004831","terms_by_termid":{"GO:0004831":null}}


id: PBO:0074951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-2","termid":"PBO:0074951"}


id: MONDO:0007292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete celiac artery stenosis from compression by median arcuate ligament of diaphragm (obsolete MONDO:0007292)","termid":"MONDO:0007292","xrefs":{"Monarch":{"xref_id":"0007292"}}}


id: PBO:0030007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_middle_meiotic_gene_mRNA_during_late_meiosis","termid":"PBO:0030007"}


id: PBO:0067759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 59","termid":"PBO:0067759"}


id: MONDO:0019044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tumor of hematopoietic and lymphoid tissues (obsolete MONDO:0019044)","secondary_identifiers":["Orphanet:68347"],"termid":"MONDO:0019044","xrefs":{"Monarch":{"xref_id":"0019044"}}}


id: PBO:0067427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 546, pseudogene","termid":"PBO:0067427"}


id: MONDO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor usually arising in the synovium of joints, bursa or tendon sheath. It is characterized by the presence of mononuclear cells, multinucleated osteoclast-like giant cells, hemosiderin-laden macrophages, foam cells, and an inflammatory infiltrate. According to the growth pattern, it is classified as localized or diffuse.","definition_xrefs":["NCIT:C3402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"giant cell tumor","termid":"MONDO:0002171"},{"relation_name":"is_a","term_name":"synovium neoplasm","termid":"MONDO:0002528"},{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"},{"relation_name":"is_a","term_name":"tendon sheath disorder","termid":"MONDO:0024876"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenosynovial giant cell tumor","secondary_identifiers":["MEDGEN:232927","SCTID:310605004","EFO:1000562","ICD9:727.02","DOID:314","ICDO:9252/0","ICD9:727.89","SCTID:95412009","UMLS:C1318543"],"synonyms":[{"name":"fibrous histiocytoma of tendon sheath","type":"exact"},{"name":"giant cell neoplasm of Tenosynovium","type":"exact"},{"name":"giant cell neoplasm of tendon sheath","type":"exact"},{"name":"giant cell neoplasm of the Tenosynovium","type":"exact"},{"name":"giant cell tumor of Tenosynovium","type":"exact"},{"name":"giant cell tumor of tendon sheath","type":"exact"},{"name":"giant cell tumor of the Tenosynovium","type":"exact"},{"name":"giant cell tumour of Tenosynovium","type":"exact"},{"name":"giant cell tumour of tendon sheath","type":"exact"},{"name":"giant cell tumour of the Tenosynovium","type":"exact"},{"name":"tendon sheath giant cell neoplasm","type":"exact"},{"name":"tendon sheath giant cell tumor","type":"exact"},{"name":"tendon sheath giant cell tumour","type":"exact"},{"name":"tenosynovial giant cell neoplasm","type":"exact"},{"name":"tenosynovial giant cell tumor","type":"exact"}],"termid":"MONDO:0002522","xrefs":{"Monarch":{"xref_id":"0002522"}}}


id: PBO:0051507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of nuclear factor kappa B kinase subunit epsilon","termid":"PBO:0051507"}


id: GO:0004953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an icosanoid to initiate a change in cell activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"icosanoid receptor activity","synonyms":[{"name":"eicosanoid receptor activity","type":"exact"}],"termid":"GO:0004953"}


id: PBO:0080476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault RNA 1-2","termid":"PBO:0080476"}


id: PBO:0074855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 43","termid":"PBO:0074855"}


id: PBO:0073233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 6","termid":"PBO:0073233"}


id: GO:0044823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the covalent insertion of double-stranded retroviral DNA into host DNA. Proceeds by an endonucleolytic cleavage at each 3'-OH extremity of the viral genome, named 3'-processing, followed by a strand transfer reaction leading to the insertion of the processed viral DNA into the target DNA by a trans-esterification mechanism.","definition_xrefs":["PMID:19091057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrase activity","termid":"GO:0008907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"retroviral integrase activity","termid":"GO:0044823"}


id: PBO:0084270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p; may interact with ribosomes, based on co-purification experiments; may have a role in intracellular sterol transport","termid":"PBO:0084270"}


id: PBO:0033831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centractin family actin-like protein Arp1","termid":"PBO:0033831"}


id: GO:0097021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lymphocyte within the lymphatic system into lymphoid organs such as lymph nodes, spleen or Peyer's patches, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen.","definition_xrefs":["PMID:18379575","GOC:BHF","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte migration into lymphoid organs","synonyms":[{"name":"lymphocyte homing","type":"narrow"}],"termid":"GO:0097021"}


id: PBO:0055634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3073","termid":"PBO:0055634"}


id: GO:0002134
data:
  {"annotated_genes":["SJAG_03453","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90653,91472],"is_not":false,"summary":null,"term":"GO:0002134"}]},"cv_name":"molecular_function","definition":"Binding to UTP, uridine 5'-triphosphate.","definition_xrefs":["GOC:hjd","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide binding","termid":"GO:0032557"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"UTP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002134","terms_by_termid":{"GO:0002134":null}}


id: GO:0018085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of conversion of a L-amino acid into its enantiomer, the corresponding D-amino acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"},{"relation_name":"is_a","term_name":"chiral amino acid racemization","termid":"GO:0018366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"peptidyl-L-amino acid racemization","termid":"GO:0018085"}


id: GO:2000797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amniotic stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell differentiation","termid":"GO:2000739"},{"relation_name":"regulates","term_name":"amniotic stem cell differentiation","termid":"GO:0097086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amniotic stem cell differentiation","termid":"GO:2000797"}


id: PBO:0090141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit, ribosomal protein L7-like Rpl701","termid":"PBO:0090141"}


