# terms

id: PBO:0058361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4733 host gene","termid":"PBO:0058361"}


id: PBO:0041524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 82","termid":"PBO:0041524"}


id: GO:0043208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid binding","termid":"GO:0046625"},{"relation_name":"is_a","term_name":"glycolipid binding","termid":"GO:0051861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"glycosphingolipid binding","termid":"GO:0043208"}


id: PBO:0081655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 580","termid":"PBO:0081655"}


id: MONDO:0008924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital cataract-ichthyosis syndrome is characterized by congenital cataract associated with ichthyosis. It has been described in less than ten patients from two unrelated families. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:1376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"congenital cataract-ichthyosis syndrome","secondary_identifiers":["OMIM:212400","UMLS:C1859315","GARD:1145","MEDGEN:347122","MESH:C538281"],"synonyms":[{"name":"Syndermotic cataract and congenital ichthyosis","type":"related"},{"name":"cataract and congenital ichthyosis","type":"related"}],"termid":"MONDO:0008924","xrefs":{"Monarch":{"xref_id":"0008924"}}}


id: PATO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to form multiple differentiated cell types.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Multipotent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multipotent","termid":"PATO:0001402"}


id: PBO:0063507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 and DNA damage regulated 1","termid":"PBO:0063507"}


id: GO:0052598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histamine + O2 = H2O2 + imidazole-4-acetaldehyde + NH4+.","definition_xrefs":["RHEA:25625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diamine oxidase activity","termid":"GO:0052597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"histamine oxidase activity","secondary_identifiers":["MetaCyc:RXN-9600","Reactome:R-HSA-5696131","KEGG_REACTION:R02150"],"synonyms":[{"name":"1H-Imidazole-4-ethanamine oxidase activity","type":"exact"},{"name":"1H-Imidazole-4-ethanamine:oxygen oxidoreductase (deaminating) activity","type":"exact"},{"name":"histamine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0052598"}


id: GO:1902328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication initiation that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication initiation","termid":"GO:1902292"},{"relation_name":"part_of","term_name":"bacterial-type DNA replication","termid":"GO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"bacterial-type DNA replication initiation","synonyms":[{"name":"DNA endoreduplication initiation involved in bacterial-type DNA replication","type":"narrow"},{"name":"DNA re-replication initiation involved in bacterial-type DNA replication","type":"narrow"},{"name":"DNA replication initiation involved in bacterial-type DNA replication","type":"exact"},{"name":"DNA-dependent DNA replication initiation involved in bacterial-type DNA replication","type":"exact"}],"termid":"GO:1902328"}


id: MONDO:0020048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Internal carotid artery (ICA) agenesis (uni or bilateral) is a developmental defect that may be asymptomatic or lead to cerebrovascular lesions. It is a rare malformation, with only around hundred cases reported in the literature. When symptoms are present, they are caused by cerebrovascular insufficiency, compression of the brain by vessels that dilate to compensate for the absence of the ICA, or the presence of an aneurysm. Associated intracranial aneurysms occur in 25 to 35% of patients and are often responsible for intracranial hemorrhage, which may present as the initial symptom. The absence of the ICA is the result of either agenesis or aplasia. The term agenesis is used when both the ICA and its bony canal are absent, whereas there is some evidence of carotid canals in cases of aplasia. The absence of the ICA can be detected by angiography or by computerized tomography.","definition_xrefs":["Orphanet:981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal carotid agenesis","secondary_identifiers":["icd11.foundation:368564890","MEDGEN:928576","GARD:3012","SCTID:722004001","UMLS:C4302907"],"synonyms":[{"name":"agenesis of the internal carotid artery","type":"related"},{"name":"internal carotid artery agenesis","type":"related"}],"termid":"MONDO:0020048","xrefs":{"Monarch":{"xref_id":"0020048"}}}


id: PBO:0059739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 13","termid":"PBO:0059739"}


id: GO:0019187
data:
  {"annotated_genes":["SJAG_02102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004578"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannose residue to an oligosaccharide, forming a beta-(1->4) linkage.","definition_xrefs":["PMID:8166646","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"beta-1,4-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"termid":"GO:0019187","terms_by_termid":{"GO:0004578":null}}


id: FYPO:0003197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell differs from normal during a cellular response to copper ion starvation. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to copper ion starvation","termid":"FYPO:0006208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered RNA level during cellular response to copper ion starvation during vegetative growth","synonyms":[{"name":"abnormal RNA level during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during cellular response to copper ion starvation during mitotic cell cycle","type":"related"},{"name":"altered RNA level during cellular response to copper starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during copper starvation during vegetative growth","type":"exact"},{"name":"altered cellular RNA level during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"altered transcript level during cellular response to copper ion starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0003197"}


id: MONDO:0020090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility due to gonadal dysgenesis (obsolete MONDO:0020090)","secondary_identifiers":["Orphanet:98313"],"synonyms":[{"name":"Male infertility due to testicular dysgenesis","type":"exact"}],"termid":"MONDO:0020090","xrefs":{"Monarch":{"xref_id":"0020090"}}}


id: GO:0032265
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75253],"is_not":false,"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"Any process which produces xanthosine monophosphate from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"XMP biosynthetic process","termid":"GO:0097293"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"XMP salvage","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0032265","terms_by_termid":{"GO:0032265":null}}


id: MONDO:0021400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the colon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"},{"relation_name":"is_a","term_name":"polyp of large intestine","termid":"MONDO:0021392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"polyp of colon","secondary_identifiers":["UMLS:C0009376","MEDGEN:3166","MESH:D003111","ICD10CM:K63.5","NCIT:C2954","SCTID:68496003"],"synonyms":[{"name":"colon polyp","type":"exact"},{"name":"colonic polyp","type":"exact"},{"name":"polyp of the colon","type":"exact"}],"termid":"MONDO:0021400","xrefs":{"Monarch":{"xref_id":"0021400"}}}


id: GO:0030177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Wnt signal transduction.","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"positively_regulates","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Wnt signaling pathway","secondary_identifiers":["GO:0045811"],"synonyms":[{"name":"activation of Wnt receptor signaling pathway","type":"narrow"},{"name":"activation of frizzled signaling pathway","type":"narrow"},{"name":"positive regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway","type":"exact"},{"name":"positive regulation of frizzled signaling pathway","type":"exact"},{"name":"positive regulation of frizzled signalling pathway","type":"exact"},{"name":"stimulation of Wnt receptor signaling pathway","type":"narrow"},{"name":"stimulation of frizzled signaling pathway","type":"narrow"},{"name":"up regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"up regulation of frizzled signaling pathway","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"up-regulation of frizzled signaling pathway","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway","type":"exact"},{"name":"upregulation of frizzled signaling pathway","type":"exact"}],"termid":"GO:0030177"}


id: MONDO:1010745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatomyositis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis, non-human animal","termid":"MONDO:1010127"},{"relation_name":"is_a","term_name":"polymyositis, dog","termid":"MONDO:1010931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatomyositis, dog","secondary_identifiers":["OMIA:000270-9615"],"termid":"MONDO:1010745","xrefs":{"Monarch":{"xref_id":"1010745"}}}


id: GO:0046250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of limonene (4-isopropenyl-1-methyl-cyclohexene), a monocyclic monoterpene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limonene metabolic process","termid":"GO:0018923"},{"relation_name":"is_a","term_name":"monoterpene biosynthetic process","termid":"GO:0043693"},{"relation_name":"is_a","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"limonene biosynthetic process","synonyms":[{"name":"limonene anabolism","type":"exact"},{"name":"limonene biosynthesis","type":"exact"},{"name":"limonene formation","type":"exact"},{"name":"limonene synthesis","type":"exact"}],"termid":"GO:0046250"}


id: PBO:0077611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 2","termid":"PBO:0077611"}


id: FYPO:0008246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from cenH measured in a cell is normal. cenH is a region located between mat2-P and mat3-M that is homologous to centromeric repeats, and that produces non-coding RNAs and small interfering RNAs.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cenH-derived RNA level","termid":"FYPO:0008246"}


id: GO:1901171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of naphthalene.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00082","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene biosynthetic process (obsolete GO:1901171)","synonyms":[{"name":"naphthalene anabolism","type":"exact"},{"name":"naphthalene biosynthesis","type":"exact"},{"name":"naphthalene formation","type":"exact"},{"name":"naphthalene synthesis","type":"exact"}],"termid":"GO:1901171"}


id: GO:0052582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pulegone + reduced [NADPH--hemoprotein reductase] + O2 = (R)-menthofuran + 2 H2O + +H+ + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:25658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(+)-menthofuran synthase activity","secondary_identifiers":["EC:1.14.14.143","KEGG_REACTION:R08923","MetaCyc:1.14.13.104-RXN"],"synonyms":[{"name":"(+)-MFS activity","type":"broad"},{"name":"(+)-pulegone 9-hydroxylase activity","type":"related"},{"name":"(+)-pulegone,NADPH:oxygen oxidoreductase (9-hydroxylating) activity","type":"related"},{"name":"cytochrome P450 menthofuran synthase activity","type":"related"},{"name":"menthofuran synthase activity","type":"related"}],"termid":"GO:0052582"}


id: GO:0097213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the lysosomal membrane.","definition_xrefs":["GOC:yaf","PMID:20544854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"},{"relation_name":"is_a","term_name":"lysosomal membrane organization","termid":"GO:0097212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of lysosomal membrane permeability","synonyms":[{"name":"regulation of lysosome membrane permeability","type":"exact"}],"termid":"GO:0097213"}


id: PBO:0054228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1610","termid":"PBO:0054228"}


id: GO:2000948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xyloglucan metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"xyloglucan metabolic process","termid":"GO:0010411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of xyloglucan metabolic process","synonyms":[{"name":"regulation of xyloglucan metabolism","type":"exact"}],"termid":"GO:2000948"}


id: PBO:0004714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-T (predicted)","termid":"PBO:0004714"}


id: PATO:0001054
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex angle that is inside two adjacent sides of a polygon.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex angle to","termid":"PATO:0001053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal angle","termid":"PATO:0001054"}


id: PBO:0088261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TruA family tRNA/ U2 snRNA pseudouridine synthase Lsp1","termid":"PBO:0088261"}


id: MONDO:0015681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pervasive developmental disorder with a disease onset before the age of three and characterized by a dramatic loss of behavioral and developmental functioning after atleast two years of normal development. Manifestations of the disease include loss of speech, incontinence, communication and social interaction problems, stereotypical autistic behaviors and dementia.","definition_xrefs":["Orphanet:168782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pervasive developmental disorder","termid":"MONDO:0000594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"childhood disintegrative disorder","secondary_identifiers":["SCTID:71961003","MedDRA:10008522","UMLS:C0236791","icd11.foundation:1460615954","MEDGEN:472967","NCIT:C97164","ICD9:299.1","SCTID:61831009","DOID:13487","GARD:6040"],"synonyms":[{"name":"childhood disintegrative disease","type":"exact"},{"name":"dementia infantilis","type":"exact"},{"name":"disintegrative psychosis","type":"exact"},{"name":"heller syndrome","type":"exact"},{"name":"heller's syndrome","type":"exact"},{"name":"symbiotic psychosis","type":"exact"}],"termid":"MONDO:0015681","xrefs":{"Monarch":{"xref_id":"0015681"}}}


id: PBO:0003886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S9 (predicted)","termid":"PBO:0003886"}


id: MONDO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian dysgenesis (obsolete MONDO:0000081)","termid":"MONDO:0000081","xrefs":{"Monarch":{"xref_id":"0000081"}}}


id: MONDO:0008146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta type I is a mild type of osteogenesis imperfecta (OI), a genetic disorder characterized by increased bone fragility, low bone mass and susceptibility to bone fractures.","definition_xrefs":["Orphanet:216796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 1","secondary_identifiers":["MEDGEN:9799","OMIM:166200","GARD:8694","icd11.foundation:1897905410","NCIT:C99003","DOID:0110334","UMLS:C0023931","SCTID:385482004"],"synonyms":[{"name":"Adair-Dighton syndrome","type":"exact"},{"name":"OI type 1","type":"exact"},{"name":"OI, type 1","type":"related"},{"name":"OI1","type":"exact"},{"name":"Van der Hoeve syndrome","type":"exact"},{"name":"classic non-deforming OI with blue sclerae","type":"related"},{"name":"mild osteogenesis imperfecta","type":"exact"},{"name":"non-deforming osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta tarda","type":"related"},{"name":"osteogenesis imperfecta type 1","type":"exact"},{"name":"osteogenesis imperfecta type I","type":"exact"},{"name":"osteogenesis imperfecta with blue sclerae","type":"related"},{"name":"osteogenesis imperfecta, type 1","type":"related"},{"name":"osteogenesis imperfecta, type I","type":"related"}],"termid":"MONDO:0008146","xrefs":{"Monarch":{"xref_id":"0008146"}}}


id: GO:0015925
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004557"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of galactosyl compounds, substances containing a group derived from a cyclic form of galactose or a galactose derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"galactosidase activity","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0015925","terms_by_termid":{"GO:0004557":null}}


id: PBO:0043667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10A","termid":"PBO:0043667"}


id: MOD:01923
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-aspartic acid residue and an L-lysine residue by an isopeptide bond to form N6-(L-aspartyl)-L-lysine and the release of water.","definition_xrefs":["PubMed:15044436","RESID:AA0583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(L-aspartyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(2S)-2-amino-3-carboxypropanoyl]amino)hexanoic acid","type":"exact"},{"name":"N(epsilon)-(alpha-aspartyl)lysine","type":"exact"},{"name":"N6-(L-aspartyl)-L-lysine","type":"exact"},{"name":"XLNK-4Asp-N6Lys(Asp)","type":"exact"},{"name":"alpha-(N6-lysyl)aspartyl acid","type":"exact"},{"name":"aspartyl N6-lysine","type":"exact"}],"termid":"MOD:01923"}


id: MONDO:0003941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromophobe renal cell carcinoma","termid":"MONDO:0017885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"classic variant of chromophobe renal cell carcinoma","secondary_identifiers":["NCIT:C27888","UMLS:C1333062","DOID:6605","MEDGEN:232080"],"synonyms":[{"name":"classic variant of chromophobe renal cell carcinoma","type":"exact"}],"termid":"MONDO:0003941","xrefs":{"Monarch":{"xref_id":"0003941"}}}


id: PBO:0027873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_UV","termid":"PBO:0027873"}


id: MOD:01396
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to a 5-hydroxy-3-methyl-L-proline.","definition_xrefs":["PubMed:7592021","PubMed:8557573","RESID:AA0473"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"monohydroxylated proline","termid":"MOD:01024"},{"relation_name":"has_functional_parent","term_name":"monomethylated proline","termid":"MOD:01417"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxy-3-methyl-L-proline (Pro)","synonyms":[{"name":"(2S,3S,5Xi)-5-hydroxy-3-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-hydroxy-3-methyl-L-proline","type":"exact"},{"name":"5-hydroxy-3-methylproline","type":"exact"},{"name":"5Hy3MePro","type":"exact"},{"name":"MOD_RES 5-hydroxy-3-methylproline (Ile)","type":"exact"},{"name":"beta-methyl-delta-hydroxyproline","type":"exact"}],"termid":"MOD:01396"}


id: MONDO:0010341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A class of genetic disorders resulting in intellectual disability that is associated either with mutations of genes located on the X chromosome or aberrations in the structure of the X chromosome (sex chromosome aberrations).","definition_xrefs":["MESH:D038901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, X-linked 2","secondary_identifiers":["OMIM:300495","MEDGEN:336964","UMLS:C1845539"],"synonyms":[{"name":"AUTSX2","type":"exact"},{"name":"autism susceptibility, X-linked 2, isolated cases, X-linked","type":"exact"},{"name":"autism, susceptibility to, X-linked 2","type":"exact"},{"name":"autism, susceptibility to, X-linked type 2","type":"exact"},{"name":"intellectual developmental disorder, X-linked, Isolated cases, X-linked","type":"exact"},{"name":"intellectual disability, X-linked","type":"related"},{"name":"mental retardation, X-linked","type":"related"},{"name":"susceptibility to X-linked autism 2","type":"related"}],"termid":"MONDO:0010341","xrefs":{"Monarch":{"xref_id":"0010341"}}}


id: GO:0050160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + orsellinate depside = 2 o-orsellinate + H+.","definition_xrefs":["EC:3.1.1.40","RHEA:19549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"orsellinate-depside hydrolase activity","secondary_identifiers":["KEGG_REACTION:R00054","MetaCyc:ORSELLINATE-DEPSIDE-HYDROLASE-RXN"],"synonyms":[{"name":"lecanorate hydrolase activity","type":"related"}],"termid":"GO:0050160"}


id: GO:0034149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 5 signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 5 signaling pathway","termid":"GO:0034147"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 5 signaling pathway","termid":"GO:0034146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 5 signaling pathway","synonyms":[{"name":"positive regulation of TLR5 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 5 signalling pathway","type":"exact"}],"termid":"GO:0034149"}


id: PBO:0072643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTEL1-TNFRSF6B readthrough (NMD candidate)","termid":"PBO:0072643"}


id: PBO:0113550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase, poorly characterised, conflicting annotations between species, implicated in ribosome associted, centrosome associated, gene expression","termid":"PBO:0113550"}


id: PBO:0085629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Fe-S cluster transfer to mitochondrial clients; protects [4Fe-4S] clusters from damage due to oxidative stress by acting along with Nfu1p at a late step in the transfer of [4Fe-4S] clusters from the ISA complex to mitochondrial client proteins like lipoate synthase and succinate dehydrogenase; sequence similarity to human BOLA family member, BOLA3, mutations of which are associated with Multiple Mitochondria Dysfunctions Syndrome (MMDS2)","termid":"PBO:0085629"}


id: PBO:0090215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, meiotic, STKc MAK-like Mde3","termid":"PBO:0090215"}


id: GO:0002167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ternary complex consisting of VRK3, VHR (Dusp3), and ERK1 (Mapk3) existing in neuronal cells, and is involved in regulation of the ERK signaling pathway.","definition_xrefs":["PMID:16845380","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"VRK3/VHR/ERK complex","termid":"GO:0002167"}


id: PBO:0039922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF19 antisense RNA 1","termid":"PBO:0039922"}


id: PBO:0109080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3104","termid":"PBO:0109080"}


id: FYPO:0005151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of pneumocandin B0 than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to pneumocandin B0","synonyms":[{"name":"resistance to pneumocandin B0 during mitotic cell cycle","type":"related"},{"name":"resistance to pneumocandin B0 during vegetative growth","type":"exact"},{"name":"resistant to pneumocandin B0","type":"exact"}],"termid":"FYPO:0005151"}


id: PBO:0087290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silenced copy of ALPHA1 at HML; ALPHA1 encodes a transcriptional coactivator involved in the regulation of mating-type alpha-specific gene expression","termid":"PBO:0087290"}


id: FYPO:0007838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide alpha-N-acetyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:34019809","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal peptide alpha-N-acetyltransferase activity","synonyms":[{"name":"normal NAT activity","type":"related"},{"name":"normal protein N-terminal acetyltransferase activity","type":"exact"}],"termid":"FYPO:0007838"}


id: MONDO:1012795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any polyneuropathy that occurs in dogs due to a mutation in the GJA9 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"polyneuropathy, dog","termid":"MONDO:1012354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, GJA9-related, dog","secondary_identifiers":["OMIA:002119-9615"],"synonyms":[{"name":"LPN1","type":"exact"}],"termid":"MONDO:1012795","xrefs":{"Monarch":{"xref_id":"1012795"}}}


id: PBO:0044059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin D","termid":"PBO:0044059"}


id: GO:0008906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + inosine = ADP + IMP.","definition_xrefs":["EC:2.7.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"inosine kinase activity","secondary_identifiers":["MetaCyc:INOSINEKIN-RXN","RHEA:21140"],"synonyms":[{"name":"ATP:inosine 5'-phosphotransferase activity","type":"related"},{"name":"inosine kinase (phosphorylating)","type":"related"},{"name":"inosine-guanosine kinase activity","type":"related"}],"termid":"GO:0008906"}


id: PBO:0062669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily K member 1 pseudogene","termid":"PBO:0062669"}


id: PBO:0091974
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELL-Associated Factor","termid":"PBO:0091974"}


id: GO:0005633
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any particle of coalesced lipids in an ascus or ascospore. May include associated proteins.","definition_xrefs":["PMID:12702293","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid droplet","termid":"GO:0005811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ascus lipid droplet","synonyms":[{"name":"ascus lipid particle","type":"exact"}],"termid":"GO:0005633"}


id: MONDO:0013451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progressive myoclonic epilepsy type 5 (obsolete MONDO:0013451)","termid":"MONDO:0013451","xrefs":{"Monarch":{"xref_id":"0013451"}}}


id: PBO:0065297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 1","termid":"PBO:0065297"}


id: PBO:0001667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Did4","termid":"PBO:0001667"}


id: PBO:0052545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killin, p53 regulated DNA replication inhibitor","termid":"PBO:0052545"}


id: SO:0000672
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence that is conserved, although rearranged relative to the micronucleus, in the macronucleus of a ciliate genome.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_rearrangement_feature","termid":"SO:0000669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macronucleus_destined_segment","synonyms":[{"name":"macronucleus destined segment","type":"exact"}],"termid":"SO:0000672"}


id: PBO:0085807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; ECM18 has a paralog, ICT1, that arose from the whole genome duplication","termid":"PBO:0085807"}


id: MONDO:0044714
data:
  {"annotated_genes":["SJAG_02265"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85062],"is_not":false,"summary":null,"term":"MONDO:0044714"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"mitochondrial myopathy-cerebellar ataxia-pigmentary retinopathy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4540096","MEDGEN:1620960","OMIM:617675","GARD:17934","Orphanet:502423"],"synonyms":[{"name":"MMYAT","type":"related"},{"name":"mitochondrial myopathy-cerebellar atrophy-pigmentary retinopathy syndrome","type":"exact"},{"name":"myopathy, mitochondrial, and ataxia","type":"related"}],"termid":"MONDO:0044714","terms_by_termid":{"MONDO:0044714":null},"xrefs":{"Monarch":{"xref_id":"0044714"}}}


id: PBO:0076425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 1 (pseudogene)","termid":"PBO:0076425"}


id: GO:1901204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901204)","synonyms":[{"name":"regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901204"}


id: MONDO:0017804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive leukoencephalopathy-ischemic stroke-retinitis pigmentosa syndrome is a rare neurologic disease characterized by global developmental delay, intellectual disability, multiple ischemic lesions in brain MRI, behavioral abnormalities, dystonia, choreic movements and pyramidal syndrome, facial dysmorphism (hypertelorism, arched palate, macroglossia), retinitis pigmentosa, scoliosis, seizures.","definition_xrefs":["Orphanet:314572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive leukoencephalopathy-ischemic stroke-retinitis pigmentosa syndrome","secondary_identifiers":["UMLS:C4749919","GARD:21378","MEDGEN:1654941"],"termid":"MONDO:0017804","xrefs":{"Monarch":{"xref_id":"0017804"}}}


id: FYPO:0008165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is decreased during prometaphase of mitosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to kinetochore during mitotic M phase","termid":"FYPO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to kinetochore during mitotic prometaphase","termid":"FYPO:0008165"}


id: PBO:0028939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_growth","termid":"PBO:0028939"}


id: FYPO:0006137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1-stearoylglycerophosphocholine (18:0) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:28667014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular 1-stearoylglycerophosphocholine (18:0) level","synonyms":[{"name":"increased 1-stearoylglycerophosphocholine (18:0) accumulation","type":"related"},{"name":"increased cellular 1-stearoyl-sn-glycero-3-phosphocholine level","type":"exact"},{"name":"increased cellular 1-stearoylglycerophosphocholine (18:0) level during mitotic cell cycle","type":"related"},{"name":"increased cellular 1-stearoylglycerophosphocholine (18:0) level during vegetative growth","type":"exact"}],"termid":"FYPO:0006137"}


id: PBO:0043804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 4","termid":"PBO:0043804"}


id: FYPO:0004287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via nonhomologous end joining (NHEJ) is decreased. NHEJ is the repair of double-strand breaks in DNA in which the two broken ends are rejoined with little or no sequence complementarity.","definition_xrefs":["PomBase:mah","GO:0006303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-strand break repair during vegetative growth","termid":"FYPO:0003660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000298","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased double-strand break repair via nonhomologous end joining","synonyms":[{"name":"decreased NHEJ","type":"exact"},{"name":"decreased double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"decreased double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"decreased nonhomologous end joining","type":"exact"},{"name":"reduced double-strand break repair via nonhomologous end joining","type":"exact"}],"termid":"FYPO:0004287"}


id: GO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the kinin cascade.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinin cascade","termid":"GO:0002256"},{"relation_name":"is_a","term_name":"negative regulation of acute inflammatory response","termid":"GO:0002674"},{"relation_name":"is_a","term_name":"negative regulation of protein activation cascade","termid":"GO:2000258"},{"relation_name":"negatively_regulates","term_name":"kinin cascade","termid":"GO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of kinin cascade","synonyms":[{"name":"down regulation of kinin cascade","type":"exact"},{"name":"down-regulation of kinin cascade","type":"exact"},{"name":"downregulation of kinin cascade","type":"exact"},{"name":"inhibition of kinin cascade","type":"narrow"}],"termid":"GO:0002257"}


id: PBO:0059334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6 pseudogene 4","termid":"PBO:0059334"}


id: FYPO:0005548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to brefeldin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to brefeldin A","synonyms":[{"name":"increased protein phosphorylation during cellular response to brefeldin A during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to brefeldin A during vegetative growth","type":"exact"}],"termid":"FYPO:0005548"}


id: PBO:0062132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily E member 1","termid":"PBO:0062132"}


id: PATO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001214 temparature_unit (obsolete PATO:0001214)","termid":"PATO:0001214"}


id: MONDO:1012291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal hepatitis, non-human animal","termid":"MONDO:1011779"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal hepatitis, dog","secondary_identifiers":["OMIA:001094-9615"],"termid":"MONDO:1012291","xrefs":{"Monarch":{"xref_id":"1012291"}}}


id: GO:0016680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, NAD or NADP as acceptor","secondary_identifiers":["EC:1.10.1.-"],"termid":"GO:0016680"}


id: GO:0018262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a covalent cross-link between or within peptide chains, where either the amino group or the carboxyl group, or both, are not attached to the alpha carbon.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide cross-linking","termid":"GO:0018149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isopeptide cross-linking","termid":"GO:0018262"}


id: PBO:0052369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 17","termid":"PBO:0052369"}


id: PBO:0034338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_1_orthology_relationship_with","termid":"PBO:0034338"}


id: MONDO:0018788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete COL4A1 or COL4A2-related cerebral small vessel disease (obsolete MONDO:0018788)","secondary_identifiers":["Orphanet:477759"],"synonyms":[{"name":"COL4A1 or COL4A2-related cerebral angiopathy","type":"exact"}],"termid":"MONDO:0018788","xrefs":{"Monarch":{"xref_id":"0018788"}}}


id: GO:0052909
data:
  {"annotated_genes":["SJAG_02821"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68219],"is_not":false,"summary":null,"term":"GO:0052909"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 S-adenosyl-L-methionine + adenine(1779)/adenine(1780) in 18S rRNA = 4 S-adenosyl-L-homocysteine + N(6)-dimethyladenine(1779)/N(6)-dimethyladenine(1780) in 18S rRNA.","definition_xrefs":["RHEA:42780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine-N6,N6-)-dimethyltransferase activity","termid":"GO:0000179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-11634","EC:2.1.1.183"],"synonyms":[{"name":"M(6)(2)A dimethylase activity","type":"broad"}],"termid":"GO:0052909","terms_by_termid":{"GO:0052909":null}}


id: GO:0032428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-beta-D-galactosaminides.","definition_xrefs":["EC:3.2.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-N-acetylhexosaminidase activity","termid":"GO:0004563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"beta-N-acetylgalactosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.53-RXN"],"termid":"GO:0032428"}


id: PBO:0059990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 10","termid":"PBO:0059990"}


id: MONDO:0004842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the oral mucosa due to local or systemic factors.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucositis","termid":"MONDO:0020579"},{"relation_name":"is_a","term_name":"mouth mucosa disorder","termid":"MONDO:0044992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatitis","secondary_identifiers":["ICD9:528.00","DOID:9637","NCIT:C26887","MESH:D013280","UMLS:C0038362","SCTID:61170000","ICD9:528.0","EFO:0009688","MEDGEN:52511"],"synonyms":[{"name":"inflammation of mouth mucosa","type":"exact"},{"name":"mouth mucosa inflammation","type":"exact"},{"name":"mucositis oral","type":"exact"},{"name":"oral mucositis","type":"exact"}],"termid":"MONDO:0004842","xrefs":{"Monarch":{"xref_id":"0004842"}}}


id: MONDO:0020506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarioleukodystrophy (obsolete MONDO:0020506)","secondary_identifiers":["Orphanet:99853"],"termid":"MONDO:0020506","xrefs":{"Monarch":{"xref_id":"0020506"}}}


id: PBO:0030970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_inner_repeat","termid":"PBO:0030970"}


id: GO:0000965
data:
  {"annotated_genes":["SJAG_04885","SJAG_02991","SJAG_01704","SJAG_06586","SJAG_00997","SJAG_02288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70509,114222],"is_not":false,"summary":null,"term":"GO:0000965"},{"annotations":[80120,87525,117721,69713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an RNA molecule transcribed from a mitochondrial genome; occurs in the mitochondrion.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA processing","termid":"GO:0000963"},{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02991":null,"SJAG_04885":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467"],"is_obsolete":false,"name":"mitochondrial RNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial RNA 3' end processing","type":"related"}],"termid":"GO:0000965","terms_by_termid":{"GO:0000965":null,"GO:1990180":null}}


id: GO:0061325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the outflow tract.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in outflow tract morphogenesis","termid":"GO:0061325"}


id: PR:O14033
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29B12.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.12","synonyms":[{"name":"Spom972h-SPAC29B12.12","type":"exact"}],"termid":"PR:O14033"}


id: PBO:0108565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair endonuclease non-catalytic (ERCC1) subunit Swi10","termid":"PBO:0108565"}


id: PBO:0040772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 7","termid":"PBO:0040772"}


id: GO:1900943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (Z)-nonadeca-1,14-diene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"positive regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900940"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900941"},{"relation_name":"positively_regulates","term_name":"(Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of (Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"activation of (Z)-nonadeca-1,14-diene anabolism","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene biosynthesis","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene formation","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene synthesis","type":"narrow"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900943"}


id: GO:0102896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (10E,12Z,15Z)-9-hydroperoxyoctadeca-10,12,15-trienoate = colnelenate + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete colnelenate synthase activity (obsolete GO:0102896)","termid":"GO:0102896"}


id: PBO:0036498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA biogenesis protein Bcd1 (predicted)","termid":"PBO:0036498"}


id: PBO:0013749
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tuberous Sclerosis Complex","termid":"PBO:0013749"}


id: PBO:0073866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 2","termid":"PBO:0073866"}


id: PBO:0043430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 2","termid":"PBO:0043430"}


id: PBO:0004994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum membrane protein involved in assembly of the V-ATPase (predicted)","termid":"PBO:0004994"}


id: PBO:0087350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spindle pole body (SPB) component; required for the insertion of the duplication plaque into the nuclear membrane during SPB duplication; essential for bipolar spindle formation; component of the Mps2p-Bbp1p complex; NBP1 has a paralog, YPR174C, that arose from the whole genome duplication","termid":"PBO:0087350"}


id: MONDO:0000743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial hyperplasia of the oral cavity mucosa associated with Epstein-Barr virus and found almost exclusively in persons with HIV infection. The lesion consists of a white patch that is often corrugated or hairy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oral hairy leukoplakia","secondary_identifiers":["UMLS:C0206186","SCTID:414952002","MESH:D017733","MEDGEN:104797","ICD9:528.6","NCIT:C3722","DOID:0060315","ICD10CM:K13.3"],"synonyms":[{"name":"hairy leukoplakia","type":"related"},{"name":"hairy leukoplakia of mouth","type":"exact"},{"name":"hairy leukoplakia of oral mucosa","type":"exact"},{"name":"hairy leukoplakia of the mouth","type":"exact"},{"name":"hairy leukoplakia of the oral mucosa","type":"exact"},{"name":"mouth hairy leukoplakia","type":"exact"},{"name":"oral cavity hairy leukoplakia","type":"exact"},{"name":"oral hairy keratosis","type":"exact"}],"termid":"MONDO:0000743","xrefs":{"Monarch":{"xref_id":"0000743"}}}


id: MONDO:0000554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the endocervix. It is the most common type of endocervical adenocarcinoma. The neoplastic epithelium shows a pseudostratified architecture and the malignant cells have enlarged, elongated, and hyperchromatic nuclei.","definition_xrefs":["NCIT:C127907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocervical carcinoma","termid":"MONDO:0004259"},{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endocervical adenocarcinoma","secondary_identifiers":["SCTID:123842006","DOID:0050940","ONCOTREE:ECAD","UMLS:C1263762","MEDGEN:688039"],"synonyms":[{"name":"endocervical adenocarcinoma, usual type","type":"exact"},{"name":"endocervix adenocarcinoma","type":"exact"}],"termid":"MONDO:0000554","xrefs":{"Monarch":{"xref_id":"0000554"}}}


id: PBO:0082547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein with similarity to glucanases; scw4 scw10 double mutants exhibit defects in mating; SCW4 has a paralog, SCW10, that arose from the whole genome duplication","termid":"PBO:0082547"}


id: MONDO:0004828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A urolithiasis that involves the lower urinary tract.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis","termid":"MONDO:0024647"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower urinary tract calculus","secondary_identifiers":["UMLS:C0156264","ICD10CM:N21","ICD9:594","ICD9:594.8","ICD10CM:N21.9","MEDGEN:510219","SCTID:79509009","DOID:9590","ICD9:594.9"],"synonyms":[{"name":"lower urinary tract urolithiasis","type":"exact"},{"name":"urolithiasis of lower urinary tract","type":"exact"}],"termid":"MONDO:0004828","xrefs":{"Monarch":{"xref_id":"0004828"}}}


id: GO:0032979
data:
  {"annotated_genes":["SJAG_05300","SJAG_05302","SJAG_03633","SJAG_01405","SJAG_01917"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58164,74246,78063,78412,78487],"is_not":false,"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"The process in which a protein is incorporated into the mitochondrial inner membrane from the matrix side. This includes membrane insertion of newly synthesized mitochondrially-encoded proteins, and insertion of nuclear-encoded proteins after their import into the mitochondrial matrix.","definition_xrefs":["GOC:vw","PMID:12880202","PMID:15473843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane organization","termid":"GO:0007007"},{"relation_name":"is_a","term_name":"protein insertion into membrane from inner side","termid":"GO:0032978"},{"relation_name":"is_a","term_name":"protein insertion into mitochondrial membrane","termid":"GO:0051204"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01405":null,"SJAG_01917":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007005","GO:0051179"],"is_obsolete":false,"name":"protein insertion into mitochondrial inner membrane from matrix","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"insertion of proteins into the mitochondrial membrane from the inner side","type":"exact"},{"name":"protein insertion into mitochondrial inner membrane from matrix side","type":"exact"},{"name":"protein insertion into mitochondrial membrane from inner side","type":"exact"}],"termid":"GO:0032979","terms_by_termid":{"GO:0032979":null}}


id: PR:Q10301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0652 protein C22H10.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.08","synonyms":[{"name":"Spom972h-SPAC22H10.08","type":"exact"}],"termid":"PR:Q10301"}


id: FYPO:0001552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of zinc ion measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular zinc level","synonyms":[{"name":"increased cellular zinc ion level","type":"exact"},{"name":"increased cellular zinc level during mitotic cell cycle","type":"related"},{"name":"increased cellular zinc level during vegetative growth","type":"exact"},{"name":"increased zinc accumulation","type":"related"}],"termid":"FYPO:0001552"}


id: MOD:00216
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-formyl-L-lysine.","definition_xrefs":["OMSSA:43","Unimod:122#K","PubMed:15799070","RESID:AA0211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-formyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(formylamino)hexanoic acid","type":"exact"},{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"},{"name":"MOD_RES N6-formyllysine","type":"exact"},{"name":"N(zeta)-formyllysine","type":"exact"},{"name":"N6-formyl-L-lysine","type":"exact"},{"name":"N6-formylated L-lysine","type":"exact"},{"name":"N6FoLys","type":"exact"},{"name":"epsilon-formyllysine","type":"exact"},{"name":"formylk","type":"exact"}],"termid":"MOD:00216"}


id: PBO:0059913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 36","termid":"PBO:0059913"}


id: GO:0052893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N1-acetylspermine + oxygen + H2O = N-(3-acetamidopropyl)-4-aminobutanal + propane-1,3-diamine + hydrogen peroxide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N1-acetylspermine:oxygen oxidoreductase (propane-1,3-diamine-forming) activity (obsolete GO:0052893)","termid":"GO:0052893"}


id: MONDO:0030994
data:
  {"annotated_genes":["SJAG_04335"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85369],"is_not":false,"summary":null,"term":"MONDO:0030994"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04335":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without autism or seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1784023","GARD:18540","UMLS:C5543225","OMIM:619239"],"synonyms":[{"name":"NEDAUS","type":"exact"},{"name":"neurodevelopmental disorder with or without autism or seizures","type":"exact"}],"termid":"MONDO:0030994","terms_by_termid":{"MONDO:0030994":null},"xrefs":{"Monarch":{"xref_id":"0030994"}}}


id: FYPO:0001823
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chlorpromazine. Cells stop growing (and may die) at a concentration of chlorpromazine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to chlorpromazine","synonyms":[{"name":"hypersensitive to chlorpromazine","type":"exact"},{"name":"sensitive to chlorpromazine during mitotic cell cycle","type":"related"},{"name":"sensitive to chlorpromazine during vegetative growth","type":"exact"}],"termid":"FYPO:0001823"}


id: PBO:0064647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPEF1 antisense RNA 1","termid":"PBO:0064647"}


id: MONDO:0000341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poliomyelitis that results in destruction located in motor neurons of central nervous system, has material basis in Human poliovirus 1, has material basis in Human poliovirus 2, or has material basis in Human poliovirus 3, which are transmitted by ingestion of food or water contaminated with feces, or transmitted by direct contact with the oral secretions. The infection has symptom loss of reflexes, has symptom muscle spasms, and has symptom acute flaccid paralysis.","definition_xrefs":["DOID:0050515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poliomyelitis","termid":"MONDO:0017373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"paralytic poliomyelitis","secondary_identifiers":["MEDGEN:1684656","UMLS:C1405301"],"termid":"MONDO:0000341","xrefs":{"Monarch":{"xref_id":"0000341"}}}


id: PBO:0055835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and fibronectin type III domain containing 5","termid":"PBO:0055835"}


id: PBO:0078178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-2P (non-functional)","termid":"PBO:0078178"}


id: GO:0098024
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The fibrous region of the virus tail used to scan, recognize and attach to the host cell.","definition_xrefs":["GOC:bm","VZ:4416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"virus tail","termid":"GO:0098015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail, fiber","synonyms":[{"name":"bacteriophage tail fiber","type":"narrow"}],"termid":"GO:0098024"}


id: PBO:0002628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase (predicted)","termid":"PBO:0002628"}


id: MONDO:0003106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete verrucous keratotic hemangioma (obsolete MONDO:0003106)","termid":"MONDO:0003106","xrefs":{"Monarch":{"xref_id":"0003106"}}}


id: GO:0031870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a thromboxane A2 receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"thromboxane A2 receptor binding","synonyms":[{"name":"prostanoid TP receptor binding","type":"exact"},{"name":"thromboxane A2 receptor ligand","type":"narrow"}],"termid":"GO:0031870"}


id: PBO:0080079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 41","termid":"PBO:0080079"}


id: GO:0035155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from adopting a terminal cell fate in an open tracheal system. Once the terminal and fusion fates have been correctly induced, inhibitory feedback loops prevent the remaining branch cells from assuming similar fates.","definition_xrefs":["GOC:mtg_sensu","PMID:10684581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"terminal cell fate specification, open tracheal system","termid":"GO:0035154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of terminal cell fate specification, open tracheal system","synonyms":[{"name":"down regulation of terminal cell fate specification","type":"exact"},{"name":"down-regulation of terminal cell fate specification","type":"exact"},{"name":"downregulation of terminal cell fate specification","type":"exact"},{"name":"inhibition of terminal cell fate specification","type":"narrow"},{"name":"negative regulation of terminal cell fate specification","type":"exact"}],"termid":"GO:0035155"}


id: MONDO:0002604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant mesenchymal neoplasm arising from the perivascular cells of the connective and soft tissues. It is characterized by the presence of pericytes that grow in a circumferential pattern around vessels.","definition_xrefs":["NCIT:C6528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell neoplasm","termid":"MONDO:0002616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericytic neoplasm","secondary_identifiers":["DOID:3316","MEDGEN:235473","UMLS:C1335392"],"synonyms":[{"name":"Pericytic neoplasm","type":"exact"},{"name":"Pericytic tumor","type":"exact"},{"name":"Pericytic tumour","type":"exact"},{"name":"malignant perivascular cancer","type":"narrow"},{"name":"perivascular neoplasm","type":"exact"},{"name":"perivascular tumor","type":"exact"},{"name":"perivascular tumour","type":"exact"}],"termid":"MONDO:0002604","xrefs":{"Monarch":{"xref_id":"0002604"}}}


id: PBO:0040511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin receptor 1B","termid":"PBO:0040511"}


id: GO:0009309
data:
  {"annotated_genes":["SJAG_02505","SJAG_04546","SJAG_03632","SJAG_01455","SJAG_05007","SJAG_00043","SJAG_04481","SJAG_03167"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77015,79068,73094,74060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[75418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[110968],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010967"},{"annotations":[77493,74672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008295"},{"annotations":[77492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_03632":null,"SJAG_04481":null,"SJAG_04546":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"amine anabolism","type":"exact"},{"name":"amine biosynthesis","type":"exact"},{"name":"amine formation","type":"exact"},{"name":"amine synthesis","type":"exact"}],"termid":"GO:0009309","terms_by_termid":{"GO:0000162":null,"GO:0006597":null,"GO:0008295":null,"GO:0010967":null,"GO:0033387":null}}


id: PBO:0039709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A1","termid":"PBO:0039709"}


id: PBO:0084824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for assembly of cytochrome bc1 complex; forms a complex with Cbp6p that binds to mt ribosomes near the polypeptide tunnel exit and promotes efficient translation of the COB mRNA; Cbp3p-Cbp6p complex also interacts with newly synthesized cytochrome b (Cobp) and Cbp4p to promote assembly of Cobp into the cytochrome bc1 complex; Cbp3p-Cbp6p complex is sequestered if assembly of Complex III is blocked, downregulating COB mRNA translation","termid":"PBO:0084824"}


id: MONDO:0042908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Schaap-Taylor-Baraitser syndrome (obsolete MONDO:0042908)","termid":"MONDO:0042908","xrefs":{"Monarch":{"xref_id":"0042908"}}}


id: PBO:0067235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 306, pseudogene","termid":"PBO:0067235"}


id: PBO:0001581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint protein Bub3","termid":"PBO:0001581"}


id: GO:0008100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any member of the major class of lipid-transporting proteins found in the hemolymph of insects.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete lipophorin (obsolete GO:0008100)","synonyms":[{"name":"lipophorin","type":"exact"}],"termid":"GO:0008100"}


id: PBO:0112880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dihydrolipoamide dehydrogenase (e3 component of oxoglutarate dehydrogenase complex) Dld1","termid":"PBO:0112880"}


id: MONDO:0021574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 3","secondary_identifiers":["UMLS:C4540205","MEDGEN:1617317","OMIM:617712"],"synonyms":[{"name":"OOMD3","type":"exact"},{"name":"oocyte maturation defect 3","type":"exact"}],"termid":"MONDO:0021574","xrefs":{"Monarch":{"xref_id":"0021574"}}}


id: MONDO:0957779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with language delay and variable cognitive abnormalities","secondary_identifiers":["UMLS:C5882689","MEDGEN:1850358","OMIM:620502"],"termid":"MONDO:0957779","xrefs":{"Monarch":{"xref_id":"0957779"}}}


id: MONDO:0100011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The chronic degeneration of a tendon without inflammation.","definition_xrefs":["PMID:27469590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disease of the tendon","termid":"MONDO:0100010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tendinosis","secondary_identifiers":["MEDGEN:293673","SCTID:724152009","UMLS:C1568363"],"termid":"MONDO:0100011","xrefs":{"Monarch":{"xref_id":"0100011"}}}


id: PBO:0060248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCBP associated protein","termid":"PBO:0060248"}


id: MONDO:0008663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Snowflake vitreoretinal degeneration (SVD) is characterized by the presence of small granular-like deposits resembling snowflakes in the retina, fibrillary vitreous degeneration and cataract. The prevalence is unknown but the disorder has been described in several families. Transmission is autosomal dominant and the causative gene has been localized to a small region on chromosome 2q36.","definition_xrefs":["Orphanet:91496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"snowflake vitreoretinal degeneration","secondary_identifiers":["OMIM:193230","DOID:0111570","ICD10CM:H35.5","UMLS:C1860405","MEDGEN:395476","icd11.foundation:282570444","GARD:9706","MESH:C536677"],"synonyms":[{"name":"SVD","type":"related"},{"name":"snowflake degeneration in hereditary vitreoretinal degeneration","type":"related"},{"name":"snowflake vitreoretinal degeneration","type":"exact"},{"name":"vitreoretinal degeneration, snowflake type","type":"related"}],"termid":"MONDO:0008663","xrefs":{"Monarch":{"xref_id":"0008663"}}}


id: FYPO:0008339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the 3' ends of non-polyadenylated RNA molecules is abolished.","definition_xrefs":["PMID:39333464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished 3' end uridylation of non-polyadenylated RNA","termid":"FYPO:0008339"}


id: PBO:0002413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25 (predicted)","termid":"PBO:0002413"}


id: MONDO:0017195
data:
  {"annotated_genes":["SJAG_01005"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009806"}]},"cv_name":"mondo","definition":"Bruck syndrome is characterized by the association of osteogenesis imperfecta and congenital joint contractures.","definition_xrefs":["Orphanet:2771"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01005":null},"genotype_count":0,"is_obsolete":false,"name":"Bruck syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:733.99","DOID:0060231","GARD:1029","SCTID:254113006","MedDRA:10063718","UMLS:C0432253","MEDGEN:609420","icd11.foundation:1783996418","OMIMPS:259450"],"synonyms":[{"name":"osteogenesis imperfecta with congenital joint contractures","type":"exact"},{"name":"osteogenesis imperfecta-congenital joint contractures syndrome","type":"exact"}],"termid":"MONDO:0017195","terms_by_termid":{"MONDO:0009806":null},"xrefs":{"Monarch":{"xref_id":"0017195"}}}


id: MONDO:1010661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thrombocytopenia that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia, non-human animal","termid":"MONDO:1010080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, horse","secondary_identifiers":["OMIA:001001-9796"],"termid":"MONDO:1010661","xrefs":{"Monarch":{"xref_id":"1010661"}}}


id: GO:0003311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and functional features that characterize a pancreatic delta cell. A delta cell is a cell of the pancreas that produces somatostatin.","definition_xrefs":["GOC:dph","PMID:11076772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enteroendocrine cell differentiation","termid":"GO:0035883"},{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"endocrine pancreas development","termid":"GO:0031018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic D cell differentiation","synonyms":[{"name":"pancreatic delta cell differentiation","type":"exact"}],"termid":"GO:0003311"}


id: GO:0072027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the connecting tubule over time, from its formation to the mature structure. The connecting tubule is a tubular segment of the nephron; it connects the distal convoluted tubule to the collecting duct.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connecting tubule development","synonyms":[{"name":"connecting duct development","type":"exact"}],"termid":"GO:0072027"}


id: GO:0000760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"In organisms that undergo conjugation without cellular fusion, the process resulting in desensitization following exposure to pheromone stimulus that act to down-regulate further stimulation or block initial conjugation responses.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pheromone regulating conjugation with mutual genetic exchange","termid":"GO:0000756"},{"relation_name":"is_a","term_name":"negative adaptation of signaling pathway","termid":"GO:0022401"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adaptation to pheromone regulating conjugation with mutual genetic exchange","synonyms":[{"name":"adaptation to pheromone involved conjugation without cellular fusion","type":"related"},{"name":"desensitization to pheromone during conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000760"}


id: PBO:0048123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 4","termid":"PBO:0048123"}


id: PBO:0077640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin related transmembrane protein 4","termid":"PBO:0077640"}


id: FYPO:0001968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glucosyltransferase activity","termid":"FYPO:0001089"},{"relation_name":"is_a","term_name":"abnormal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}


id: PBO:0031143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-chromosome_loss_during_mitotic_chromosome_segregation","termid":"PBO:0031143"}


id: GO:0080166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stomium over time, from its formation to the mature structure. A stomium is a fissure or pore in the anther lobe through which the pollen is released.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"anther development","termid":"GO:0048653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomium development","termid":"GO:0080166"}


id: MONDO:0010910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nocturnal enuresis with at least 3 nightly episodes in children older than 7 years, where the child has always had the disorder.","direct_ancestors":[{"relation_name":"is_a","term_name":"nocturnal enuresis","termid":"MONDO:0000022"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enuresis, nocturnal, 1","secondary_identifiers":["OMIM:600631"],"synonyms":[{"name":"Bedwetting","type":"related"},{"name":"ENUR1","type":"exact"},{"name":"enuresis, nocturnal, 1","type":"exact"}],"termid":"MONDO:0010910","xrefs":{"Monarch":{"xref_id":"0010910"}}}


id: PBO:0058601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6733","termid":"PBO:0058601"}


id: MONDO:0011795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anonychia-microcephaly syndrome is a multiple congenital anomaly disorder characterized by anonychia congenita totalis and microcephaly, and normal intelligence along with some minor anomalies including single transverse palmar creases, fifth-finger clinodactyly and widely-spaced teeth.","definition_xrefs":["Orphanet:1094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anonychia-microcephaly syndrome","secondary_identifiers":["GARD:5123","SCTID:720494009","OMIM:607214","UMLS:C1846617","MEDGEN:339565"],"synonyms":[{"name":"Teebi-Kaurah syndrome","type":"exact"},{"name":"anonychia total with microcephaly","type":"related"},{"name":"anonychia, total, with microcephaly","type":"related"},{"name":"total anonychia congenita and microcephaly","type":"related"},{"name":"total anonychia with microcephaly","type":"related"}],"termid":"MONDO:0011795","xrefs":{"Monarch":{"xref_id":"0011795"}}}


id: MOD:01421
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a serine hydroxyl with the carbonyl of the preceding residue to form an oxazole or oxazoline ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues","termid":"MOD:01419"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"}


id: MONDO:0001189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete esophageal carcinoma (obsolete MONDO:0001189)","termid":"MONDO:0001189","xrefs":{"Monarch":{"xref_id":"0001189"}}}


id: PBO:0058171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4466","termid":"PBO:0058171"}


id: PBO:0082864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm D3; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm D3","termid":"PBO:0082864"}


id: FYPO:0000145
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[119386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[119016,119244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects the regulation of a molecular function, biological process, or biological quality.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype","termid":"FYPO:0000114"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_01330":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":3,"genotypes_by_uniquename":{"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04464","SJAG_00871"],"name":"regulation phenotype","references_by_uniquename":{"PMID:21802294":null,"PMID:28954740":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330","SJAG_04284"],"single_locus_genotype_uniquenames":["mad2delta","nup61delta"],"synonyms":[{"name":"fission yeast regulation phenotype","type":"exact"}],"termid":"FYPO:0000145","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000619":null,"FYPO:0004318":null,"FYPO_EXT:0000001":null}}


id: PBO:0040334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 2","termid":"PBO:0040334"}


id: PBO:0076321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptoporin","termid":"PBO:0076321"}


id: GO:0045550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of phytyl group from the stepwise reduction of a geranylgeranyl group.","definition_xrefs":["PMID:9492312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"geranylgeranyl reductase activity","termid":"GO:0045550"}


id: MONDO:0008629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, uric acid, autosomal dominant","secondary_identifiers":["DOID:0080654","MEDGEN:393068","OMIM:191700","UMLS:C2674049"],"synonyms":[{"name":"nephrolithiasis, uric acid, autosomal dominant","type":"related"},{"name":"urolithiasis, uric acid, autosomal dominant","type":"exact"}],"termid":"MONDO:0008629","xrefs":{"Monarch":{"xref_id":"0008629"}}}


id: MONDO:0020704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, neuromuscular disorder characterized by muscle hyperirritability triggered by stretch, percussion or movement. Patients present wave-like, electrically-silent muscle contractions (rippling), muscle mounding, painful muscle stiffness and muscle hypertrophy, usually with elevated serum creatine kinase.","definition_xrefs":["Orphanet:97238"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"caveolinopathy","termid":"MONDO:0016146"},{"relation_name":"is_a","term_name":"rippling muscle disease","termid":"MONDO:0011634"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"inherited rippling muscle disease","secondary_identifiers":["MedDRA:10069417"],"synonyms":[{"name":"RMD","type":"broad"},{"name":"rippling muscle disease","type":"broad"}],"termid":"MONDO:0020704","xrefs":{"Monarch":{"xref_id":"0020704"}}}


id: MONDO:1011791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial myopathy, non-human animal","secondary_identifiers":["OMIA:000695"],"termid":"MONDO:1011791","xrefs":{"Monarch":{"xref_id":"1011791"}}}


id: GO:0004408
data:
  {"annotated_genes":["SJAG_04008","SJAG_03199"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72528,76965],"is_not":false,"summary":null,"term":"GO:0004408"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: holocytochrome c = apocytochrome c + heme.","definition_xrefs":["EC:4.4.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"holocytochrome-c synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:HOLOCYTOCHROME-C-SYNTHASE-RXN","RHEA:22648","Reactome:R-HSA-9866217"],"synonyms":[{"name":"cytochrome c heme-lyase activity","type":"related"},{"name":"cytochrome c synthase activity","type":"related"},{"name":"holocytochrome c synthetase activity","type":"related"},{"name":"holocytochrome-c apocytochrome-c-lyase (heme-forming)","type":"related"},{"name":"holocytochrome-c apocytochrome-c-lyase activity","type":"related"}],"termid":"GO:0004408","terms_by_termid":{"GO:0004408":null}}


id: PR:Q9P790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 72 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02667","PRO:DNx","PANTHER:PTHR13275:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR complex protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.13c","secondary_identifiers":["UniProtKB:Q9P790"],"synonyms":[{"name":"Spom972h-VPS72","type":"exact"}],"termid":"PR:Q9P790"}


id: PBO:0091600
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cor-C? is nse6","termid":"PBO:0091600"}


id: MONDO:0016100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"acquired rippling muscle disease","termid":"MONDO:0021142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"rippling muscle disease with myasthenia gravis","secondary_identifiers":["MEDGEN:1657345","Orphanet:206575","GARD:20353","UMLS:C4749335","icd11.foundation:327350590"],"synonyms":[{"name":"Rmd-MG","type":"exact"},{"name":"acquired rippling muscle disease","type":"broad"},{"name":"immune-mediated rippling muscle disease","type":"exact"}],"termid":"MONDO:0016100","xrefs":{"Monarch":{"xref_id":"0016100"}}}


id: MONDO:0006937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the dental pulp.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dental pulp disorder","termid":"MONDO:0003394"},{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulpitis","secondary_identifiers":["DOID:11121","icd11.foundation:576344431","UMLS:C0034103","ICD9:522.0","MEDGEN:19580","EFO:1001139","ICD10CM:K04.0","MESH:D011671","MedDRA:10037463","SCTID:32620007"],"synonyms":[{"name":"dental pulp inflammation","type":"exact"},{"name":"inflammation of dental pulp","type":"exact"}],"termid":"MONDO:0006937","xrefs":{"Monarch":{"xref_id":"0006937"}}}


id: MONDO:0020264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar degenerescence and spastic paraparesis with an oculomotor anomaly (obsolete MONDO:0020264)","secondary_identifiers":["Orphanet:98694"],"termid":"MONDO:0020264","xrefs":{"Monarch":{"xref_id":"0020264"}}}


id: PBO:0041558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 48, pseudogene","termid":"PBO:0041558"}


id: PBO:0077776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM40 pseudogene 3","termid":"PBO:0077776"}


id: PBO:0040327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 2","termid":"PBO:0040327"}


id: PBO:0086715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutation results in impaired mitochondrial respiration","termid":"PBO:0086715"}


id: GO:0070409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carbamoyl phosphate, an intermediate in the urea cycle and other nitrogen compound metabolic pathways.","definition_xrefs":["CHEBI:17672","GOC:mah","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbamoyl phosphate metabolic process","termid":"GO:0070408"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbamoyl phosphate biosynthetic process","synonyms":[{"name":"carbamoyl phosphate anabolism","type":"exact"},{"name":"carbamoyl phosphate biosynthesis","type":"exact"},{"name":"carbamoyl phosphate formation","type":"exact"},{"name":"carbamoyl phosphate synthesis","type":"exact"},{"name":"carbamyl phosphate biosynthetic process","type":"exact"}],"termid":"GO:0070409"}


id: PR:Q8TFH5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB17E12.09 gene.","definition_xrefs":["UniProtKB:Q8TFH5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated protein PB17E12.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.09","synonyms":[{"name":"Spom972h-SPAPB17E12.09","type":"exact"}],"termid":"PR:Q8TFH5"}


id: GO:0042363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"vitamin catabolic process","termid":"GO:0009111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fat-soluble vitamin catabolic process","synonyms":[{"name":"fat-soluble vitamin breakdown","type":"exact"},{"name":"fat-soluble vitamin catabolism","type":"exact"},{"name":"fat-soluble vitamin degradation","type":"exact"}],"termid":"GO:0042363"}


id: PBO:0079295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 12","termid":"PBO:0079295"}


id: GO:0102624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + scutellarein 7-methyl ether = H+ + ladanein + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"scutellarein 7-methyl ether 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15529"],"termid":"GO:0102624"}


id: MONDO:0016052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atypical autism is a pervasive developmental disorder that does not fit the diagnosis for the other specific autistic spectrum disorders (autism, Asperger syndrome, Rett syndrome or childhood disintegrative disorder) and is characterized by usually milder developmental and social delay and less stereotypical autistic behavior. '","definition_xrefs":["Orphanet:199627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pervasive developmental disorder","termid":"MONDO:0000594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"atypical autism","secondary_identifiers":["SCTID:231536004","DOID:0060042","GARD:20336","ICD9:299.80","icd11.foundation:2136163538","UMLS:C0338986","MedDRA:10003747","MEDGEN:572882"],"termid":"MONDO:0016052","xrefs":{"Monarch":{"xref_id":"0016052"}}}


id: GO:0051585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of dopamine into a presynaptic neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine uptake involved in synaptic transmission","termid":"GO:0051584"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine uptake involved in synaptic transmission","termid":"GO:0051945"},{"relation_name":"negatively_regulates","term_name":"dopamine uptake involved in synaptic transmission","termid":"GO:0051583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dopamine uptake involved in synaptic transmission","synonyms":[{"name":"down regulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"down-regulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"downregulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"negative regulation of dopamine import involved in synaptic transmission","type":"exact"}],"termid":"GO:0051585"}


id: PBO:0052544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein pseudogene 1","termid":"PBO:0052544"}


id: PBO:0041512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 180","termid":"PBO:0041512"}


id: MONDO:0017322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with defective bone mineralization (obsolete MONDO:0019705)","termid":"MONDO:0019705"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorders of vitamin D metabolism","secondary_identifiers":["UMLS:C5681017","Orphanet:289098","MEDGEN:1842308","GARD:21132"],"termid":"MONDO:0017322","xrefs":{"Monarch":{"xref_id":"0017322"}}}


id: FYPO:0001030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing dithiothreitol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on dithiothreitol","synonyms":[{"name":"normal cell population growth in presence of dithiothreitol","type":"exact"},{"name":"normal cell population growth on 1,4-dithiothreitol","type":"exact"},{"name":"normal cell population growth on DTT","type":"exact"},{"name":"normal cell population growth on dithiothreitol","type":"exact"},{"name":"normal cellular response to dithiothreitol","type":"related"},{"name":"normal vegetative cell population growth on dithiothreitol","type":"exact"}],"termid":"FYPO:0001030"}


id: GO:2000527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myeloid dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"},{"relation_name":"regulates","term_name":"myeloid dendritic cell chemotaxis","termid":"GO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell chemotaxis","termid":"GO:2000527"}


id: PBO:0083337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized gene YGL108C","termid":"PBO:0083337"}


id: PBO:0052536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 9","termid":"PBO:0052536"}


id: MONDO:0035411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital hypoglossia/aglossia","termid":"MONDO:0013003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"isolated congenital hypoglossia","secondary_identifiers":["Orphanet:563954","ICD10CM:Q38.3","GARD:22264"],"termid":"MONDO:0035411","xrefs":{"Monarch":{"xref_id":"0035411"}}}


id: PBO:0089526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyamine N-acetyltransferase","termid":"PBO:0089526"}


id: PBO:0071245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 86","termid":"PBO:0071245"}


id: MONDO:0011049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by psychomotor delay, brachycephaly with flat face, small nose, microstomia, cleft palate, cataract, hearing loss, hypoplastic scrotum and digital anomalies.","definition_xrefs":["Orphanet:1272"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fine-Lubinsky syndrome","secondary_identifiers":["GARD:958","MESH:C537933","UMLS:C0795941","MEDGEN:163198","SCTID:720955004","OMIM:601353"],"synonyms":[{"name":"brachycephaly, deafness, cataract and intellectual disability","type":"related"},{"name":"brachycephaly, deafness, cataract and mental retardation","type":"related"},{"name":"brachycephaly, deafness, cataract, microstomia, and intellectual disability","type":"related"},{"name":"brachycephaly, deafness, cataract, microstomia, and mental retardation","type":"related"},{"name":"brachycephaly-deafness-cataract-intellectual disability syndrome","type":"exact"},{"name":"fine-Lubinsky syndrome","type":"exact"}],"termid":"MONDO:0011049","xrefs":{"Monarch":{"xref_id":"0011049"}}}


id: GO:0051778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ent-7-alpha-hydroxykaurenoate + NADPH + H+ + O2 = gibberellin 12-aldehyde + NADP+ + 2 H2O. This is the second of three successive reactions resulting in the oxidation of ent-kaurenoate (ent-kaurenoic acid) to gibberellin 12 (GA12).","definition_xrefs":["MetaCyc:RXN1F-160","EC:1.14.13.79"],"gene_count":0,"genotype_count":0,"name":"obsolete ent-7-alpha-hydroxykaurenoate oxidase activity (obsolete GO:0051778)","termid":"GO:0051778"}


id: PBO:0080377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS9 domain containing 1","termid":"PBO:0080377"}


id: GO:0071733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation and maintenance of DNA loops that juxtapose the promoter and enhancer regions of RNA polymerase II-transcribed genes and activate transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:15060134","PMID:19923429","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional activation by promoter-enhancer looping (obsolete GO:0071733)","synonyms":[{"name":"long-range enhancer-promoter communication","type":"related"}],"termid":"GO:0071733"}


id: SO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TCS element is a (yeast) transcription factor binding site, bound by the TEA DNA binding domain (DBD) of transcription factors. The consensus site is CATTCC or CATTCT.","definition_xrefs":["PMID:20118212","PMID:1489142","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCS_element","synonyms":[{"name":"TCS element","type":"exact"},{"name":"TEA Consensus Sequence ","type":"exact"}],"termid":"SO:0002044"}


id: MONDO:0019484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare cerebral malformation with epilepsy syndrome characterized by early-onset gelastic (i.e. ictal laughter) or dacrystic (i.e., ictal crying) seizures due to non-neoplastic developmental malformation - hypothalamic hamartomas. In many patients, seizures progress to other seizure types including focal and generalized seizures, with concomitant cognitive decline and behavioral disorders. Some patients also present a precocious puberty.","definition_xrefs":["Orphanet:86906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothalamic hamartomas with gelastic seizures","secondary_identifiers":["UMLS:C4707883","GARD:19084","MEDGEN:1642420"],"termid":"MONDO:0019484","xrefs":{"Monarch":{"xref_id":"0019484"}}}


id: PR:Q9Y816
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1105.13c gene.","definition_xrefs":["UniProtKB:Q9Y816","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1105.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.13c","synonyms":[{"name":"Spom972h-SPBC1105.13c","type":"exact"}],"termid":"PR:Q9Y816"}


id: PBO:0068643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 24, pseudogene","termid":"PBO:0068643"}


id: PBO:0041407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 136","termid":"PBO:0041407"}


id: GO:0002053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell proliferation","synonyms":[{"name":"activation of mesenchymal cell proliferation","type":"narrow"},{"name":"stimulation of mesenchymal cell proliferation","type":"narrow"},{"name":"up regulation of mesenchymal cell proliferation","type":"exact"},{"name":"up-regulation of mesenchymal cell proliferation","type":"exact"},{"name":"upregulation of mesenchymal cell proliferation","type":"exact"}],"termid":"GO:0002053"}


id: PBO:0017617
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Marie-Tooth disease","termid":"PBO:0017617"}


id: FYPO:0002814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is abnormal. The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to cell surface","synonyms":[{"name":"abnormal protein localisation to cell surface","type":"exact"},{"name":"abnormal protein localization to cell surface during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cell surface during vegetative growth","type":"exact"}],"termid":"FYPO:0002814"}


id: MONDO:0045015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of carbohydrate transport.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolism disease","termid":"MONDO:0037792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"carbohydrate transport disease","secondary_identifiers":["SCTID:54905006","UMLS:C0268173","MEDGEN:541226"],"synonyms":[{"name":"carbohydrate transport disease","type":"exact"},{"name":"disorder of carbohydrate transport","type":"exact"}],"termid":"MONDO:0045015","xrefs":{"Monarch":{"xref_id":"0045015"}}}


id: PBO:0072302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 21","termid":"PBO:0072302"}


id: GO:0102147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3'-O-methyltricetin = H+ + S-adenosyl-L-homocysteine + 3',5'-di-O-methyltricetin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3'-O-methyltricetin O methyl transferase activity (obsolete GO:0102147)","termid":"GO:0102147"}


id: GO:2000583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of platelet-derived growth factor receptor-alpha signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010640"},{"relation_name":"regulates","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"regulation of PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"regulation of PDGFR-alpha signaling pathway","type":"related"},{"name":"regulation of alphaPDGF receptor signaling pathway","type":"exact"},{"name":"regulation of platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:2000583"}


id: PBO:0076544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine aminotransferase","termid":"PBO:0076544"}


id: GO:0010722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ferrochelatase activity; catalysis of the reaction: protoporphyrin + Fe2+ = protoheme + 2 H+.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ferrochelatase activity","termid":"GO:0010722"}


id: MONDO:0022804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colobomata unilobar lung heart defect","termid":"MONDO:0022804","xrefs":{"Monarch":{"xref_id":"0022804"}}}


id: GO:0090062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trehalose metabolism, the chemical reactions and pathways involving trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"trehalose metabolic process","termid":"GO:0005991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of trehalose metabolic process","termid":"GO:0090062"}


id: PBO:0058339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4713","termid":"PBO:0058339"}


id: PBO:0041527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 89","termid":"PBO:0041527"}


id: _global:assayed_transcript
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and a transcript, such as a gene product or transcript type in SO, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_transcript","termid":"_global:assayed_transcript"}


id: PBO:0066964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 266","termid":"PBO:0066964"}


id: PBO:0078446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining P1","termid":"PBO:0078446"}


id: GO:0008344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Locomotory behavior in a fully developed and mature organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult locomotory behavior","synonyms":[{"name":"adult locomotory behaviour","type":"exact"}],"termid":"GO:0008344"}


id: PBO:0078201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-3","termid":"PBO:0078201"}


id: MONDO:0010907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial hypertryptophanemia is characterized by intellectual deficit associated with behavioral problems: periodic mood swings, exaggerated affective responses and abnormal sexual behavior. Twelve cases have been reported so far. Congenital abnormalities in tryptophan metabolism appear to be responsible for the tryptophanemia and tryptophanuria.","definition_xrefs":["Orphanet:2224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of tryptophan metabolism","termid":"MONDO:0017350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"familial hypertryptophanemia","secondary_identifiers":["GARD:2871","MESH:C538393","MEDGEN:419177","DOID:0111703","OMIM:600627","SCTID:721838005","UMLS:C2931837"],"synonyms":[{"name":"HYPTRP","type":"related"},{"name":"familial hypertryptophanemia","type":"exact"},{"name":"hypertryptophanemia","type":"broad"},{"name":"hypertryptophanemia, familial","type":"related"}],"termid":"MONDO:0010907","xrefs":{"Monarch":{"xref_id":"0010907"}}}


id: FYPO:0002662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is lower than normal when the cell is subject to heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular trehalose level","termid":"FYPO:0001447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular trehalose level during heat shock","synonyms":[{"name":"decreased cellular trehalose level during heat shock during mitotic cell cycle","type":"related"},{"name":"decreased cellular trehalose level during vegetative growth and during heat shock","type":"exact"},{"name":"decreased trehalose accumulation during heat shock","type":"related"},{"name":"reduced cellular trehalose level during heat shock","type":"exact"}],"termid":"FYPO:0002662"}


id: PBO:0083509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CRN1","termid":"PBO:0083509"}


id: PBO:0028365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_septum_in_stationary_phase","termid":"PBO:0028365"}


id: PBO:0091155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4","termid":"PBO:0091155"}


id: MONDO:0021227
data:
  {"annotated_genes":["SJAG_03920","SJAG_02398","SJAG_01671","SJAG_01895","SJAG_00260","SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[85644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[86819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[86729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[85432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[85641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the adrenal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03429":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"adrenal gland neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C2859","ONCOTREE:ADRENALGLAND","EFO:0003850","GARD:19765","MEDGEN:1352","Orphanet:100091","UMLS:C0001624"],"synonyms":[{"name":"ADRENALGLAND","type":"related"},{"name":"adrenal gland neoplasm (disease)","type":"exact"},{"name":"adrenal gland tumor","type":"exact"},{"name":"adrenal gland tumour","type":"exact"},{"name":"adrenal neoplasm","type":"exact"},{"name":"adrenal neoplasms","type":"exact"},{"name":"adrenal tumor","type":"exact"},{"name":"adrenal tumour","type":"exact"},{"name":"adrenal/paraganglial tumor","type":"related"},{"name":"adrenal/paraganglial tumour","type":"related"},{"name":"neoplasm of adrenal gland","type":"exact"},{"name":"neoplasm of the adrenal gland","type":"exact"},{"name":"tumor of adrenal gland","type":"exact"},{"name":"tumor of the adrenal gland","type":"exact"},{"name":"tumour of adrenal gland","type":"exact"},{"name":"tumour of the adrenal gland","type":"exact"}],"termid":"MONDO:0021227","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0009050":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null},"xrefs":{"Monarch":{"xref_id":"0021227"}}}


id: MONDO:1010847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in cattle. There is a buildup of GM1 gangliosides in tissues due to a lack of the enzyme beta-galactosidase. It is characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:000402-9913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, cattle","termid":"MONDO:1010843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM1 gangliosidosis, cattle","synonyms":[{"name":"gangliosidosis GM1, cattle","type":"related"}],"termid":"MONDO:1010847","xrefs":{"Monarch":{"xref_id":"1010847"}}}


id: GO:0060902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor that modulates the rate, frequency or extent of the hair cycle.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hair cycle by BMP signaling pathway (obsolete GO:0060902)","synonyms":[{"name":"regulation of hair cycle by BMP signalling pathway","type":"exact"}],"termid":"GO:0060902"}


id: PBO:0076648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBX3 antisense RNA 1","termid":"PBO:0076648"}


id: MONDO:0013362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THOC6-related developmental delay-microcephaly-facial dysmorphism syndrome","secondary_identifiers":["GARD:17558","MEDGEN:462289","OMIM:613680","UMLS:C3150939","Orphanet:363444"],"synonyms":[{"name":"BBIS","type":"exact"},{"name":"BEAULIEU-BOYCOTT-Innes syndrome","type":"related"},{"name":"Beaulieu-Boycott-Innes syndrome","type":"exact"},{"name":"microcephaly, intellectual disability, and distinctive facies, with Cardiac and genitourinary malformations","type":"related"},{"name":"microcephaly, mental retardation, and distinctive facies, with Cardiac and genitourinary malformations","type":"related"}],"termid":"MONDO:0013362","xrefs":{"Monarch":{"xref_id":"0013362"}}}


id: MONDO:0009959
data:
  {"annotated_genes":["SJAG_03324"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86102],"is_not":false,"summary":null,"term":"MONDO:0009959"}]},"cv_name":"mondo","definition":"A genetic disorder characterized by abnormalities in the breakdown of phytanic acid. It results in accumulation of phytanic acid in the blood, brain and other tissues. Signs and symptoms include retinitis pigmentosa which may lead to blindness, hearing problems and deafness, hypotonia, ataxia, nystagmus, facial deformities, and mental and growth retardation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX12 defect","termid":"MONDO:0100266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03324":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053","MONDO:0005559","MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"peroxisome biogenesis disorder type 3B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:763607","UMLS:C3550693","OMIM:266510","DOID:0081241","GARD:15226"],"synonyms":[{"name":"PBD3B","type":"related"},{"name":"infantile phytanic acid storage disease","type":"exact"},{"name":"peroxisome biogenesis disorder 3B","type":"exact"},{"name":"peroxisome biogenesis disorder type 3B","type":"exact"}],"termid":"MONDO:0009959","terms_by_termid":{"MONDO:0009959":null},"xrefs":{"Monarch":{"xref_id":"0009959"}}}


id: PBO:0055020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2435","termid":"PBO:0055020"}


id: PBO:0052136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 3","termid":"PBO:0052136"}


id: PBO:0062536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 1","termid":"PBO:0062536"}


id: PR:P38937
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P38937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tethering factor for nuclear proteasome cut8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.13c","synonyms":[{"name":"Spom972h-cut8","type":"exact"},{"name":"cell untimely torn protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P38937"}


id: PBO:0077395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 132C","termid":"PBO:0077395"}


id: SO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet consisting of two H-bonds in which: the main-chain NH of residue(i) is H-bonded to the main-chain CO of residue(i+4), the main-chain CO of residue i is H-bonded to the main-chain NH of residue(i+3), these loops have an RL nest at residues i+2 and i+3.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_bulge_loop","termid":"SO:0001108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge_loop_five","secondary_identifiers":["BS:00210"],"synonyms":[{"name":"beta bulge loop five","type":"exact"}],"termid":"SO:0001109"}


id: GO:1904669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ATP out of a cell or organelle.","definition_xrefs":["PMID:24286344","GO_REF:0000074","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP transport","termid":"GO:0015867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"ATP export","synonyms":[{"name":"ATP efflux","type":"related"}],"termid":"GO:1904669"}


id: PBO:0031556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_catalytic_activity","termid":"PBO:0031556"}


id: PBO:0015675
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FiZzy Related","termid":"PBO:0015675"}


id: PBO:0049874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic and glial cell adhesion molecule","termid":"PBO:0049874"}


id: PBO:0082445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bud tip localized protein of unknown function; mRNA is targeted to the bud by a She2p dependent transport system; mRNA is cell cycle regulated via Fkh2p, peaking in G2/M phase; null mutant displays increased levels of spontaneous Rad52p foc","termid":"PBO:0082445"}


id: SO:1001187
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is alternatively spliced.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"alternatively_spliced","termid":"SO:0000877"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternatively_spliced_transcript","synonyms":[{"name":"alternatively spliced transcript","type":"exact"}],"termid":"SO:1001187"}


id: PBO:0078565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 49D2","termid":"PBO:0078565"}


id: PBO:0028245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0028245"}


id: PBO:0017859
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of soluble starch to glucose is 8.9 (uM min-1 ml-2)","termid":"PBO:0017859"}


id: PBO:0028343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_post-anaphase_array","termid":"PBO:0028343"}


id: GO:0043705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanophycin, a non-protein, non-ribosomally produced amino acid polymer composed of an aspartic acid backbone and arginine side groups.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanophycin metabolic process","synonyms":[{"name":"cyanophycin metabolism","type":"exact"},{"name":"multi-L-arginyl-poly(L-aspartic acid) metabolism","type":"exact"}],"termid":"GO:0043705"}


id: FYPO:0006396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which interphase microtubule organizing center (iMTOC) assembly is abnormal. iMTOC assembly is the aggregation, arrangement and bonding together of a set of components to form an interphase microtubule organizing center.","definition_xrefs":["GO:0031024","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"abnormal iMTOC assembly","synonyms":[{"name":"abnormal iMTOC assembly during mitotic cell cycle","type":"related"},{"name":"abnormal iMTOC assembly during vegetative growth","type":"exact"},{"name":"abnormal iMTOC formation","type":"exact"},{"name":"abnormal interphase microtubule organizing center assembly","type":"exact"},{"name":"abnormal interphase microtubule organizing center formation","type":"exact"}],"termid":"FYPO:0006396"}


id: PBO:0065932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 6","termid":"PBO:0065932"}


id: GO:2001081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (1->4)-beta-D-galactan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"(1->4)-beta-D-galactan binding","synonyms":[{"name":"(1,4)-beta-D-galactan binding","type":"exact"}],"termid":"GO:2001081"}


id: GO:0002550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the plasma kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of kinin cascade","termid":"GO:0002258"},{"relation_name":"is_a","term_name":"regulation of plasma kallikrein-kinin cascade","termid":"GO:0002529"},{"relation_name":"positively_regulates","term_name":"plasma kallikrein-kinin cascade","termid":"GO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of plasma kallikrein-kinin cascade","synonyms":[{"name":"activation of plasma kallikrein-kinin cascade","type":"narrow"},{"name":"stimulation of plasma kallikrein-kinin cascade","type":"narrow"},{"name":"up regulation of plasma kallikrein-kinin cascade","type":"exact"},{"name":"up-regulation of plasma kallikrein-kinin cascade","type":"exact"},{"name":"upregulation of plasma kallikrein-kinin cascade","type":"exact"}],"termid":"GO:0002550"}


id: PBO:0057610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 943","termid":"PBO:0057610"}


id: PBO:0113491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; regulates multidrug resistance and the oxidative stress response; forms a heterodimer with Pdr1p; contains a Zn(II)2Cys6 zinc finger domain that interacts with a pleiotropic drug resistance element in vitro; negative regulator of autophagy, modulating the transcription of genes involved in NADPH production and the pentose phosphate pathway; Stb5p expression is reduced during nitrogen starvation and autophagy induction, while STB5 mRNA levels are significantly increased","termid":"PBO:0113491"}


id: PBO:0004891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA export factor, nucleoporin Rae1","termid":"PBO:0004891"}


id: PBO:0005723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup186","termid":"PBO:0005723"}


id: PBO:0080711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 11","termid":"PBO:0080711"}


id: GO:0004862
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70841],"is_not":false,"summary":null,"term":"GO:0004862"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a cAMP-dependent protein kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cAMP-dependent protein kinase regulator activity","termid":"GO:0008603"},{"relation_name":"is_a","term_name":"protein serine/threonine kinase inhibitor activity","termid":"GO:0030291"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0030234","GO:0098772","GO:0004857"],"is_obsolete":false,"name":"cAMP-dependent protein kinase inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-180073"],"termid":"GO:0004862","terms_by_termid":{"GO:0004862":null}}


id: FYPO:0009039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of potassium chloride than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to potassium chloride","synonyms":[{"name":"resistance to potassium chloride during mitotic cell cycle","type":"related"},{"name":"resistance to potassium chloride during vegetative growth","type":"exact"},{"name":"resistant to potassium chloride","type":"exact"}],"termid":"FYPO:0009039"}


id: PR:O13963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphosphomevalonate decarboxylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01270","PANTHER:PTHR10977:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.03","secondary_identifiers":["UniProtKB:O13963"],"synonyms":[{"name":"MDDase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MVD","type":"exact"},{"name":"mevalonate pyrophosphate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mevalonate-5-diphosphate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13963"}


id: PBO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head transcription factor Fhl1","termid":"PBO:0002155"}


id: GO:1902297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA unwinding that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle DNA replication DNA unwinding (obsolete GO:1902297)","synonyms":[{"name":"DNA unwinding during replication involved in cell cycle DNA replication","type":"related"},{"name":"DNA unwinding factor involved in cell cycle DNA replication","type":"related"},{"name":"DNA unwinding involved in cell cycle DNA replication","type":"exact"}],"termid":"GO:1902297"}


id: PBO:0063674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 3","termid":"PBO:0063674"}


id: PBO:0046660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"espin","termid":"PBO:0046660"}


id: MONDO:0018884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Roch-Leri mesosomatous lipomatosis is a rare benign autosomal dominant disorder of fat tissue proliferation characterized by the presence of multiple small lipomas of 2 to 5 cm in diameter in the middle third of the body (i.e. the forearms, trunk, and upper thighs), and which are generally painless and can be easily removed by local anesthesia, provided that they are not too numerous or confluent. There have been no further descriptions in the literature since 1984.","definition_xrefs":["Orphanet:529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Roch-Leri mesosomatous lipomatosis","secondary_identifiers":["GARD:4733","SCTID:716772007","UMLS:C4274284","MEDGEN:896565"],"synonyms":[{"name":"Roch-Leri syndrome","type":"related"}],"termid":"MONDO:0018884","xrefs":{"Monarch":{"xref_id":"0018884"}}}


id: GO:0140209
data:
  {"annotated_genes":["SJAG_01803","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93567,93568],"is_not":false,"summary":null,"term":"GO:0140209"}]},"cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across the endoplasmic reticulum membrane, into the endoplasmic reticulum.","definition_xrefs":["PMID:29529046","PMID:11886869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"},{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"zinc ion import into endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"zinc ion import across endoplasmic reticulum","type":"exact"},{"name":"zinc ion import into ER","type":"exact"},{"name":"zinc(2+) import across endoplasmic reticulum","type":"exact"},{"name":"zinc(2+) import into endoplasmic reticulum","type":"exact"}],"termid":"GO:0140209","terms_by_termid":{"GO:0140209":null}}


id: PBO:0072075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 5","termid":"PBO:0072075"}


id: PATO:0000646
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's being distorted during formation.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deformed","termid":"PATO:0001617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malformed","synonyms":[{"name":"malformation","type":"narrow"}],"termid":"PATO:0000646"}


id: MONDO:0014174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any renal-hepatic-pancreatic dysplasia in which the cause of the disease is a mutation in the NEK8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal-hepatic-pancreatic dysplasia","termid":"MONDO:0017417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal-hepatic-pancreatic dysplasia 2","secondary_identifiers":["GARD:18432","OMIM:615415","UMLS:C3809434","MEDGEN:815764"],"synonyms":[{"name":"NEK8 renal-hepatic-pancreatic dysplasia","type":"exact"},{"name":"RHPD2","type":"related"},{"name":"renal-hepatic-pancreatic dysplasia 2","type":"exact"},{"name":"renal-hepatic-pancreatic dysplasia caused by mutation in NEK8","type":"exact"},{"name":"renal-hepatic-pancreatic dysplasia type 2","type":"exact"}],"termid":"MONDO:0014174","xrefs":{"Monarch":{"xref_id":"0014174"}}}


id: PBO:0089977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 catalytic subunit Dis2","termid":"PBO:0089977"}


id: FYPO:0007651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is abolished during mitosis.","definition_xrefs":["PomBase:mah","PMID:14730319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to pericentric heterochromatin","termid":"FYPO:0007648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to pericentric heterochromatin during mitosis","synonyms":[{"name":"abolished protein localization to centromeric heterochromatin during mitosis","type":"exact"},{"name":"abolished protein localization to nuclear centromeric heterochromatin during mitosis","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic M phase","type":"related"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007651"}


id: PBO:0028817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_single-stranded_DNA_5'-3'_exodeoxyribonuclease_activity","termid":"PBO:0028817"}


id: FYPO:0000467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of invasive growth is increased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased invasive growth (obsolete FYPO:0000467)","synonyms":[{"name":"invasive growth: increased","type":"related"}],"termid":"FYPO:0000467"}


id: PBO:0113080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine aminopeptidase with homocysteine-thiolactonase activity; protects cells against homocysteine toxicity; cytosolic protein, selectively transported to vacuole during nitrogen starvation; targeted to vacuole via CVT pathway; has bleomycin hydrolase activity in vitro; transcription is regulated by galactose via Gal4p; orthologous to human BLMH","termid":"PBO:0113080"}


id: GO:1903567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to ciliary membrane.","definition_xrefs":["GOC:cilia","PMID:22072986","GO_REF:0000058","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cilium","termid":"GO:1903564"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"protein localization to ciliary membrane","termid":"GO:1903441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to ciliary membrane","synonyms":[{"name":"regulation of protein localisation in ciliary membrane","type":"exact"},{"name":"regulation of protein localisation to ciliary membrane","type":"exact"},{"name":"regulation of protein localization in ciliary membrane","type":"exact"}],"termid":"GO:1903567"}


id: GO:0034037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a purine ribonucleoside bisphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate catabolic process","termid":"GO:0034031"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate catabolic process","termid":"GO:0034034"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleoside bisphosphate catabolic process","synonyms":[{"name":"purine ribonucleoside bisphosphate breakdown","type":"exact"},{"name":"purine ribonucleoside bisphosphate catabolism","type":"exact"},{"name":"purine ribonucleoside bisphosphate degradation","type":"exact"}],"termid":"GO:0034037"}


id: PBO:0044475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP17A1 antisense RNA 1","termid":"PBO:0044475"}


id: PBO:0069880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1168, pseudogene","termid":"PBO:0069880"}


id: GO:0102586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-malonylglucoside + 1-O-sinapoyl-beta-D-glucose = cyanidin 3-O-[2''-O-(2''-O-(sinapoyl) xylosyl) 6'-O-(p-coumaroyl) glucoside] 5-O-[6''-O-(malonyl) glucoside + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-[2''-O-(2''-O-(sinapoyl) xylosyl) 6''-O-(p-coumaroyl) glucoside] 5-O-[6''-O-(malonyl) glucoside] sinapoyltransferase activity (obsolete GO:0102586)","termid":"GO:0102586"}


id: PR:Q10238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpf1 gene.","definition_xrefs":["UniProtKB:Q10238","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic PUF family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.05","synonyms":[{"name":"Spom972h-mpf1","type":"exact"}],"termid":"PR:Q10238"}


id: GO:0170038
data:
  {"annotated_genes":["SJAG_06635","SJAG_03243","SJAG_02832","SJAG_01061","SJAG_00309","SJAG_01346","SJAG_04652","SJAG_04425","SJAG_01955","SJAG_03167","SJAG_00636","SJAG_03152","SJAG_02450","SJAG_03306","SJAG_03914","SJAG_03457","SJAG_00592","SJAG_04688","SJAG_04098","SJAG_01592","SJAG_04577","SJAG_02505","SJAG_04549","SJAG_03881","SJAG_04953","SJAG_00518","SJAG_00359","SJAG_00396","SJAG_04054","SJAG_04747","SJAG_03985","SJAG_03562","SJAG_01404","SJAG_01461","SJAG_00881","SJAG_04145","SJAG_00495","SJAG_00695","SJAG_01630","SJAG_00365","SJAG_00714","SJAG_00869","SJAG_00502","SJAG_01466","SJAG_03055","SJAG_02313","SJAG_02388","SJAG_00120","SJAG_05007","SJAG_04449","SJAG_03312","SJAG_02400","SJAG_00234","SJAG_02290","SJAG_00412","SJAG_00432","SJAG_00660","SJAG_01574","SJAG_04459","SJAG_01766","SJAG_00248","SJAG_03671","SJAG_00392","SJAG_02689","SJAG_02841","SJAG_03124","SJAG_00395","SJAG_01019","SJAG_01137","SJAG_02972","SJAG_00419","SJAG_03141","SJAG_03775","SJAG_02293","SJAG_01455","SJAG_00830","SJAG_03712","SJAG_04042","SJAG_03614","SJAG_04149","SJAG_00635","SJAG_00107","SJAG_03266","SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110882,65215,68270,105792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[57630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006529"},{"annotations":[111604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[111605,77415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[71154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"},{"annotations":[71801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[71774,73189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[71829,70189,71007,57464,70140,71124,67278,62351,65129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006526"},{"annotations":[101959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[59567,117532,111028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[78248,76396,64152,57836,70906,60026,75514,79968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"},{"annotations":[110888,108112,103088,113044,90478,103570,110228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901705"},{"annotations":[74483,90479,103089,113045,76917,79762,59224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"},{"annotations":[99805,95356,106404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[58695,76765,80115,79065,77626,78167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[98145,63037,77711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[90677,64336,67064,77630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"},{"annotations":[60889,116704,79389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"},{"annotations":[77015,73094,74060,79068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[63848,58595,75911,76627,79763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009099"},{"annotations":[64118,69835,75862,76385,77296,64732,74938,96150,113240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[70588,71651,78867,115577,64051,74335,76080,111762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[105794,110462,76929,115578,111763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"},{"annotations":[78450,63036,76387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any amino acid that is incorporated into protein naturally by ribosomal translation of mRNA, and that has a specific codon for translation from mRNA to protein.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic 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id: GO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum is received and converted into a molecular signal.","definition_xrefs":["PMID:10390516","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER overload response","termid":"GO:0006983"},{"relation_name":"is_a","term_name":"detection of biotic stimulus","termid":"GO:0009595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"detection of endoplasmic reticulum overloading","synonyms":[{"name":"detection of ER overloading","type":"exact"}],"termid":"GO:0002234"}


id: FYPO:0007142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after exposure to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability following cellular response to ionizing radiation","synonyms":[{"name":"decreased viability following cellular response to ionizing radiation","type":"exact"},{"name":"loss of cell population viability following cellular response to ionizing radiation","type":"exact"},{"name":"loss of viability following cellular response to IR","type":"exact"},{"name":"loss of viability following cellular response to gamma radiation","type":"narrow"},{"name":"loss of viability following ionizing radiation exposure","type":"exact"},{"name":"reduced viability following cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0007142"}


id: PBO:0038884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 10","termid":"PBO:0038884"}


id: GO:1903051
data:
  {"annotated_genes":["SJAG_01528","SJAG_00475","SJAG_03048","SJAG_02244","SJAG_00052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[77372,77869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[77054,106750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proteolysis involved in protein catabolic process.","definition_xrefs":["GOC:rl","GOC:TermGenie","GO_REF:0000058","GOC:BHF","PMID:18307834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proteolysis","termid":"GO:0045861"},{"relation_name":"is_a","term_name":"regulation of proteolysis involved in protein catabolic process","termid":"GO:1903050"},{"relation_name":"negatively_regulates","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_01528":null,"SJAG_02244":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteolysis involved in protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"down regulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"down regulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"down regulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"down regulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"down regulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"down regulation of proteolysis involved in cellular protein catabolic process","type":"exact"},{"name":"down-regulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"down-regulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"down-regulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"down-regulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"down-regulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"down-regulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"down-regulation of proteolysis involved in cellular protein catabolic process","type":"exact"},{"name":"downregulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"downregulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"downregulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"downregulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"downregulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"downregulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"downregulation of proteolysis involved in cellular protein catabolic process","type":"exact"},{"name":"inhibition of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"inhibition of peptidolysis during cellular protein catabolism","type":"related"},{"name":"inhibition of peptidolysis involved in cellular protein catabolic process","type":"narrow"},{"name":"inhibition of peptidolysis involved in cellular protein catabolism","type":"narrow"},{"name":"inhibition of proteolysis during cellular protein catabolic process","type":"related"},{"name":"inhibition of proteolysis during cellular protein catabolism","type":"related"},{"name":"inhibition of proteolysis involved in cellular protein catabolic process","type":"narrow"},{"name":"negative regulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"negative regulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"negative regulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"negative regulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"negative regulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"negative regulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"negative regulation of proteolysis involved in cellular protein catabolic process","type":"exact"}],"termid":"GO:1903051","terms_by_termid":{"GO:0032435":null,"GO:1904293":null,"GO:1905785":null}}


id: FYPO:0007943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal during the meiotic cell cycle. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000641","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal chromatin organization during meiotic cell cycle","termid":"FYPO:0007943"}


id: PBO:0063834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phytanoyl-CoA dioxygenase domain containing 1","termid":"PBO:0063834"}


id: MONDO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inborn vitamin B12 deficiency (obsolete MONDO:0000424)","termid":"MONDO:0000424","xrefs":{"Monarch":{"xref_id":"0000424"}}}


id: PR:Q9UTI3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-alpha-acetyltransferase 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01557","PANTHER:PTHR23091:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal acetyltransferase A complex catalytic subunit ard1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.08","secondary_identifiers":["UniProtKB:Q9UTI3"],"synonyms":[{"name":"NatA complex subunit ARD1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NAA10","type":"exact"}],"termid":"PR:Q9UTI3"}


id: FYPO:0004776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular threonine level","termid":"FYPO:0001565"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased vacuolar threonine level","synonyms":[{"name":"increased level of threonine in vacuole","type":"exact"},{"name":"increased vacuolar L-threonine level","type":"exact"},{"name":"increased vacuolar threonine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar threonine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004776"}


id: PBO:0042205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin H pseudogene 1","termid":"PBO:0042205"}


id: GO:0036102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene B4, a leukotriene composed of (6Z,8E,10E,14Z)-eicosatetraenoic acid having (5S)- and (12R)-hydroxy substituents.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"leukotriene B4 metabolic process","synonyms":[{"name":"LTB4 metabolism","type":"exact"}],"termid":"GO:0036102"}


id: GO:0047502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-cis-sabinol + NAD+ = (1S,5S)-sabinone + H+ + NADH.","definition_xrefs":["EC:1.1.1.228","RHEA:18329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(+)-sabinol dehydrogenase activity","secondary_identifiers":["MetaCyc:+-SABINOL-DEHYDROGENASE-RXN","KEGG_REACTION:R03745"],"synonyms":[{"name":"(+)-cis-sabinol dehydrogenase activity","type":"related"},{"name":"(+)-cis-sabinol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047502"}


id: PATO:0000495
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000495 persistence value (obsolete PATO:0000495)","termid":"PATO:0000495"}


id: PBO:0063050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein associated with LIN7 1, MAGUK p55 family member","termid":"PBO:0063050"}


id: GO:0010422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of brassinosteroids.","definition_xrefs":["PMID:16857903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"},{"relation_name":"regulates","term_name":"brassinosteroid biosynthetic process","termid":"GO:0016132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of brassinosteroid biosynthetic process","termid":"GO:0010422"}


id: MONDO:0014428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the EPS8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 102","secondary_identifiers":["MEDGEN:856149","GARD:22652","UMLS:C3892050","DOID:0110463","OMIM:615974"],"synonyms":[{"name":"DFNB102","type":"narrow"},{"name":"EPS8 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 102","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 102","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in EPS8","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 102","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 102","type":"exact"},{"name":"deafness, autosomal recessive 102","type":"narrow"},{"name":"deafness, autosomal recessive type 102","type":"narrow"}],"termid":"MONDO:0014428","xrefs":{"Monarch":{"xref_id":"0014428"}}}


id: FYPO:0005785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs for a shorter time than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PMID:26882497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"decreased duration of protein-protein interaction","synonyms":[{"name":"decreased duration of protein binding","type":"exact"},{"name":"reduced duration of protein-protein interaction","type":"exact"}],"termid":"FYPO:0005785"}


id: MONDO:0003703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uterine corpus leiomyomatosis (obsolete MONDO:0003703)","termid":"MONDO:0003703","xrefs":{"Monarch":{"xref_id":"0003703"}}}


id: GO:0032641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the cytokine lymphotoxin A.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"lymphotoxin A production","secondary_identifiers":["GO:0042109"],"synonyms":[{"name":"LTA production","type":"exact"},{"name":"TNF-B production","type":"exact"},{"name":"TNF-beta production","type":"exact"},{"name":"lymphotoxin A biosynthetic process","type":"narrow"},{"name":"lymphotoxin A formation","type":"related"},{"name":"lymphotoxin A synthesis","type":"narrow"},{"name":"lymphotoxin-alpha production","type":"exact"},{"name":"tumor necrosis factor-beta production","type":"exact"}],"termid":"GO:0032641"}


id: GO:0043224
data:
  {"annotated_genes":["SJAG_02591","SJAG_02651","SJAG_02822","SJAG_02162","SJAG_03219","SJAG_00341"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90394,94142,97567,104664,108870,110113],"is_not":false,"summary":null,"term":"GO:0043224"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex, located in the nucleus, in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ubiquitin ligase complex","termid":"GO:0000152"},{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_02162":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear SCF ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear SCF complex","type":"exact"},{"name":"nuclear Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"nuclear cullin complex","type":"exact"}],"termid":"GO:0043224","terms_by_termid":{"GO:0043224":null}}


id: PBO:0036347
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEUcine requiring","termid":"PBO:0036347"}


id: MONDO:0003111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation that arises from the stomach. It includes well differentiated neuroendocrine tumors (low and intermediate grade) and poorly differentiated neuroendocrine carcinomas (high grade).","definition_xrefs":["NCIT:C5696"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete gastrointestinal neuroendocrine benign tumor (obsolete MONDO:0002891)","termid":"MONDO:0002891"},{"relation_name":"is_a","term_name":"gastric neoplasm","termid":"MONDO:0021085"},{"relation_name":"is_a","term_name":"digestive system neuroendocrine neoplasm","termid":"MONDO:0024503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric neuroendocrine neoplasm","secondary_identifiers":["GARD:19750","SCTID:721194008","DOID:4715","MEDGEN:232548","Orphanet:100075","UMLS:C1333783"],"synonyms":[{"name":"NET of stomach","type":"exact"},{"name":"gastric neuroendocrine neoplasm","type":"exact"},{"name":"neuroendocrine neoplasm of stomach","type":"exact"},{"name":"neuroendocrine neoplasm of the stomach","type":"exact"},{"name":"neuroendocrine tumor of stomach","type":"related"},{"name":"neuroendocrine tumor of the stomach","type":"exact"},{"name":"neuroendocrine tumour of stomach","type":"related"},{"name":"neuroendocrine tumour of the stomach","type":"exact"},{"name":"stomach NET","type":"exact"},{"name":"stomach neuroendocrine neoplasm","type":"exact"},{"name":"stomach neuroendocrine tumor","type":"exact"},{"name":"stomach neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"stomach neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0003111","xrefs":{"Monarch":{"xref_id":"0003111"}}}


id: MONDO:0006818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete keratoconjunctivitis sicca (obsolete MONDO:0006818)","termid":"MONDO:0006818","xrefs":{"Monarch":{"xref_id":"0006818"}}}


id: PBO:0028092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_unequal_chromosome_segregation","termid":"PBO:0028092"}


id: PBO:0005030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mde7","termid":"PBO:0005030"}


id: PBO:0059633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule crosslinking factor 1","termid":"PBO:0059633"}


id: PATO:0001827
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of one sex and external sexual characteristics of the other sex.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudohermaphrodite","termid":"PATO:0001827"}


id: MONDO:0023129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Fara Chlupackova syndrome (obsolete MONDO:0023129)","termid":"MONDO:0023129","xrefs":{"Monarch":{"xref_id":"0023129"}}}


id: PBO:0076933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trefoil factor 1","termid":"PBO:0076933"}


id: PBO:0089498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF Spo7","termid":"PBO:0089498"}


id: PBO:0116815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group E member 5","termid":"PBO:0116815"}


id: PBO:0085322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 4-kinase; catalyzes the first step in the biosynthesis of phosphatidylinositol-4,5-biphosphate; may control cytokinesis through the actin cytoskeleton; required for autophagosome formation during autophagy and for lipophagy in both stationary phase cells and during nitrogen starvation; may control nonselective autophagy and mitophagy through trafficking of Atg9p; localizes to the nucleus and to the trans-Golgi network","termid":"PBO:0085322"}


id: PBO:0110385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3122","termid":"PBO:0110385"}


id: GO:0071614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts linoleic acid to a cis-epoxyoctadecenoic acid.","definition_xrefs":["PMID:11042099","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"linoleic acid epoxygenase activity","synonyms":[{"name":"linoleic acid monooxygenase activity","type":"exact"}],"termid":"GO:0071614"}


id: PBO:0083846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hMtr3p (EXOSC6)","termid":"PBO:0083846"}


id: GO:0008692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxybutanoyl-CoA = (R)-3-hydroxybutanoyl-CoA.","definition_xrefs":["EC:5.1.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"3-hydroxybutyryl-CoA epimerase activity","secondary_identifiers":["MetaCyc:OHBUTYRYL-COA-EPIM-RXN","RHEA:21760"],"synonyms":[{"name":"3-hydroxyacyl-CoA epimerase activity","type":"related"},{"name":"3-hydroxybutanoyl-CoA 3-epimerase activity","type":"related"},{"name":"3-hydroxybutyryl coenzyme A epimerase activity","type":"related"}],"termid":"GO:0008692"}


id: PBO:0059331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6","termid":"PBO:0059331"}


id: PBO:0075067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-30","termid":"PBO:0075067"}


id: PBO:0051969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involucrin","termid":"PBO:0051969"}


id: PBO:0113477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-like domain protein; binds Holliday junctions and replication fork structures; stimulates the Mms4-Mus81 endonuclease in the resolution of sister chromatid junctions; role in recombination-mediated DNA damage tolerance by recruiting Rad51p; facilitate Elg1p binding to stalled replication forks; prevents toxic intermediate accumulation during replication-associated recombinational repair; role in silencing, chromatid cohesion and the intra-S-phase DNA damage checkpoint; RENi family member","termid":"PBO:0113477"}


id: MOD:01043
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a p-nitrobenzyl group for the hydrogen atom of a carboxyl group.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p-nitrobenzyl ester modified residue","synonyms":[{"name":"ONb","type":"exact"}],"termid":"MOD:01043"}


id: PBO:0067195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 259, pseudogene","termid":"PBO:0067195"}


id: GO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of new blood vessels as a result of the insertion and extension of lumenal tissue pillars.","definition_xrefs":["PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intussusceptive angiogenesis","termid":"GO:0002041"}


id: GO:0017029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete lysosomal protein stabilization (obsolete GO:0017029)","synonyms":[{"name":"lysosomal protein stabilization","type":"exact"}],"termid":"GO:0017029"}


id: GO:0075239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a diploid cell undergoes meiosis, and the meiotic products acquire specialized features of asexual motile mononucleate flagellated spores called zoospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zoospore formation","termid":"GO:0075239"}


id: PBO:0055959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 73","termid":"PBO:0055959"}


id: MONDO:0016823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycetomas are subcutaneous inflammatory pseudotumors containing fungal or actinomycetic (bacteria with branched filaments) granules or grains.","definition_xrefs":["Orphanet:2583"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"excluded_subClassOf","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycetoma","secondary_identifiers":["MedDRA:10028427","GARD:3862","SCTID:410039003","MEDGEN:44241","MESH:D008271","ICD10CM:B47","UMLS:C0024449","NCIT:C85505"],"synonyms":[{"name":"Madura foot","type":"exact"}],"termid":"MONDO:0016823","xrefs":{"Monarch":{"xref_id":"0016823"}}}


id: PBO:0039246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member L1","termid":"PBO:0039246"}


id: PBO:0078767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (ATT) 1-2","termid":"PBO:0078767"}


id: MONDO:0035451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete left sided atrial isomerism (obsolete MONDO:0035451)","secondary_identifiers":["Orphanet:566862"],"termid":"MONDO:0035451","xrefs":{"Monarch":{"xref_id":"0035451"}}}


id: GO:0003032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an oxygen stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to oxygen levels","termid":"GO:0070482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of oxygen","termid":"GO:0003032"}


id: PR:Q9UT19
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00595","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.09","secondary_identifiers":["UniProtKB:Q9UT19"],"synonyms":[{"name":"Spom972h-metE","type":"exact"},{"name":"cobalamin-independent methionine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"methionine synthase, vitamin-B12 independent isozyme (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT19"}


id: GO:0046213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methyl ethyl ketone, a clear, colorless liquid with a fragrant, mint-like odor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyl ethyl ketone metabolic process","termid":"GO:0018928"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methyl ethyl ketone catabolic process","synonyms":[{"name":"methyl ethyl ketone breakdown","type":"exact"},{"name":"methyl ethyl ketone catabolism","type":"exact"},{"name":"methyl ethyl ketone degradation","type":"exact"}],"termid":"GO:0046213"}


id: PATO:0001065
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001065 relative stiffness (obsolete PATO:0001065)","termid":"PATO:0001065"}


id: MONDO:1010358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leber hereditary optic neuropathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dilated cardiomyopathy, non-human animal","termid":"MONDO:1010011"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"mitochondrial disease, non-human animal","termid":"MONDO:1011332"},{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leber hereditary optic neuropathy, non-human animal","secondary_identifiers":["OMIA:002557"],"termid":"MONDO:1010358","xrefs":{"Monarch":{"xref_id":"1010358"}}}


id: PBO:0054505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1905","termid":"PBO:0054505"}


id: MONDO:0035153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"male infertility","termid":"MONDO:0005372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"male infertility due to acephalic spermatozoa","secondary_identifiers":["Orphanet:529970","DOID:0112311","ICD10CM:N46","GARD:17971"],"synonyms":[{"name":"Acephalic spermatozoa syndrome","type":"exact"}],"termid":"MONDO:0035153","xrefs":{"Monarch":{"xref_id":"0035153"}}}


id: GO:0031481
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a dimer of class XI myosin heavy chains and associated light chains. Myosin XI heavy chain sizes are similar in molecular structure to the class V myosins with 5 to 6 IQ motifs and tail regions with predicted coiled coil domains (forming dimeric molecules) and large C-terminal regions.","definition_xrefs":["PMID:22973289","PMID:29307817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015629","GO:0032991"],"is_obsolete":false,"name":"myosin XI complex","termid":"GO:0031481"}


id: PBO:0110984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Paqosome core subunit, TPR repeat protein, human RPAP3 ortholog","termid":"PBO:0110984"}


id: PBO:0064112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1 like 2 (gene/pseudogene)","termid":"PBO:0064112"}


id: GO:0140246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein at a synapse.","definition_xrefs":["PMID:17062563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"protein catabolic process at synapse","termid":"GO:0140246"}


id: SO:0000183
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the gene which is not transcribed.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_component_region","termid":"SO:0000842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_transcribed_region","synonyms":[{"name":"non transcribed region","type":"exact"},{"name":"non-transcribed sequence","type":"exact"},{"name":"nontranscribed region","type":"exact"},{"name":"nontranscribed sequence","type":"exact"}],"termid":"SO:0000183"}


id: GO:0016994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: precorrin-6B + NADP+ = precorrin-6A + NADPH + H+.","definition_xrefs":["EC:1.3.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"precorrin-6A reductase activity","secondary_identifiers":["MetaCyc:1.3.1.54-RXN","RHEA:23408"],"synonyms":[{"name":"precorrin-6B:NADP+ oxidoreductase activity","type":"related"},{"name":"precorrin-6X reductase activity","type":"exact"},{"name":"precorrin-6Y:NADP(+) oxidoreductase activity","type":"related"},{"name":"precorrin-6Y:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0016994"}


id: PBO:0053668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 847","termid":"PBO:0053668"}


id: GO:0005684
data:
  {"annotated_genes":["SJAG_03112","SJAG_00363","SJAG_04898","SJAG_00076","SJAG_02078","SJAG_05025","SJAG_00859","SJAG_00911","SJAG_01870","SJAG_02304","SJAG_00414","SJAG_05349","SJAG_02227","SJAG_00504","SJAG_05240","SJAG_01152","SJAG_00498","SJAG_01214","SJAG_02455","SJAG_00322","SJAG_04318","SJAG_01654","SJAG_01810","SJAG_03995","SJAG_00225","SJAG_00474","SJAG_00577","SJAG_01008","SJAG_05009","SJAG_02722","SJAG_03427","SJAG_00147","SJAG_00597","SJAG_03430","SJAG_03469","SJAG_03966","SJAG_04783","SJAG_04117","SJAG_03301","SJAG_04163","SJAG_02560","SJAG_16453","SJAG_02279","SJAG_04214","SJAG_03547","SJAG_00094","SJAG_00602","SJAG_01315","SJAG_02558","SJAG_00206","SJAG_02185","SJAG_04911","SJAG_02844","SJAG_01301","SJAG_01504","SJAG_00809","SJAG_00058","SJAG_03983","SJAG_03993","SJAG_01452","SJAG_03210","SJAG_00249"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70923,75376,75747,77496,78088,79627,87565,95589,95959,97472,102811,104280,104311,104649,106966,111077,113649,117770,118689],"is_not":false,"summary":null,"term":"GO:0005684"},{"annotations":[79171,72114,113063,118508,91355,101042,79348,76811,97628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000243"},{"annotations":[70541,73106,77693,77175,105578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071006"},{"annotations":[77718,79039,77694,71936,77176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071007"},{"annotations":[78346,108663,57335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071008"},{"annotations":[77134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071021"},{"annotations":[105430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071005"},{"annotations":[96126,73680,79350,88305,108562,113067,113638,76513,106204,112447,78702,71940,94970,106742,72115,101537,93175,109296,109851,75581,118512,73866,102340,110435,105316,95392,70237,112159,101045,69840,72919,105676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071004"}]},"cv_name":"cellular_component","definition":"Any spliceosomal complex that forms during the splicing of a messenger RNA primary transcript to excise an intron that has canonical consensus sequences near the 5' and 3' ends.","definition_xrefs":["PMID:11343900","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00076":null,"SJAG_00094":null,"SJAG_00147":null,"SJAG_00206":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00322":null,"SJAG_00363":null,"SJAG_00414":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00577":null,"SJAG_00597":null,"SJAG_00602":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01152":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01315":null,"SJAG_01452":null,"SJAG_01504":null,"SJAG_01654":null,"SJAG_01810":null,"SJAG_01870":null,"SJAG_02078":null,"SJAG_02185":null,"SJAG_02227":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02558":null,"SJAG_02560":null,"SJAG_02722":null,"SJAG_02844":null,"SJAG_03112":null,"SJAG_03210":null,"SJAG_03301":null,"SJAG_03427":null,"SJAG_03430":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03966":null,"SJAG_03983":null,"SJAG_03993":null,"SJAG_03995":null,"SJAG_04117":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04318":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05025":null,"SJAG_05240":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"U2-type spliceosomal complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG spliceosome","type":"narrow"},{"name":"major (U2-type) spliceosomal complex","type":"exact"},{"name":"major spliceosomal complex","type":"exact"}],"termid":"GO:0005684","terms_by_termid":{"GO:0000243":null,"GO:0005684":null,"GO:0071004":null,"GO:0071005":null,"GO:0071006":null,"GO:0071007":null,"GO:0071008":null,"GO:0071021":null}}


id: MONDO:0010925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Velo-facial-skeletal syndrome is a very rare multiple congenital anomalies syndrome characterized by short stature, facial dysmorphism (elongated face, hypertelorism, broad and high nasal bridge, mild epicanthus, posteriorly angulated ears, narrow and high-arched palate), skeletal anomalies (mesomelic brachymelia, short broad hands, prominent finger pads, short stubby thumbs, hyperextensibility of small joints, small feet), hypernasality and normal intelligence. Delayed bone age has also been reported.","definition_xrefs":["Orphanet:3424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"velo-facial-skeletal syndrome","secondary_identifiers":["OMIM:600736","MESH:C536536","GARD:5469","MEDGEN:322177","UMLS:C1833380","SCTID:763616002"],"synonyms":[{"name":"VELOFACIOSKELETAL syndrome","type":"related"}],"termid":"MONDO:0010925","xrefs":{"Monarch":{"xref_id":"0010925"}}}


id: GO:0043930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle) as part of the primary follicle stage of oogenesis.","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ovarian follicle growth","termid":"GO:0001545"},{"relation_name":"part_of","term_name":"primary follicle stage","termid":"GO:0048160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth involved in primary follicle stage","synonyms":[{"name":"primary ovarian follicle growth during primary follicle stage","type":"related"}],"termid":"GO:0043930"}


id: PBO:0017535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lgl family protein Sro7 (predicted)","termid":"PBO:0017535"}


id: GO:0097744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of urate salt or uric acid from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine.","definition_xrefs":["GOC:jl","PMID:25287933","PMID:3906799","Wikipedia:Renal_physiology#Secretion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular secretion","termid":"GO:0097254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal urate salt excretion","synonyms":[{"name":"urate excretion","type":"broad"},{"name":"urate salt excretion","type":"broad"}],"termid":"GO:0097744"}


id: FYPO:0006982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, and structure of the cell wall are normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell wall morphology during vegetative growth","synonyms":[{"name":"normal cell wall morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006982"}


id: GO:0018388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The condensation of pyruvate through the 2-oxo group with the N-terminal valine of proteins to form the derivative N-pyruvic acid 2-iminyl-L-valine.","definition_xrefs":["RESID:AA0275"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-valine condensation with pyruvate to form N-pyruvic acid 2-iminyl-L-valine (obsolete GO:0018388)","termid":"GO:0018388"}


id: PBO:0070676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 47","termid":"PBO:0070676"}


id: MONDO:0001182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal edema","termid":"MONDO:0006712"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"idiopathic corneal edema","secondary_identifiers":["MEDGEN:509794","SCTID:1794009","UMLS:C0155109","DOID:11033","ICD9:371.21"],"termid":"MONDO:0001182","xrefs":{"Monarch":{"xref_id":"0001182"}}}


id: MOD:01665
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an N-terminal L-valine residue and a strand of DNA at the C-1 of a ribose, freeing the nucleotide base and forming N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-valine.","definition_xrefs":["PubMed:20185759","RESID:AA0521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-valine","synonyms":[{"name":"(2S)-2-[(3R,4R)-3,4-dihydroxy-5-(phosphonooxy)pentylidene]amino-3-methylbutanoic acid","type":"exact"},{"name":"ACT_SITE Schiff-base intermediate with DNA; via amino nitrogen","type":"exact"},{"name":"DNA glycosylase valine Schiff base intermediate","type":"exact"},{"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-valine","type":"exact"}],"termid":"MOD:01665"}


id: GO:0016008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The larger of the two mitochondrial derivatives that arise by the unfolding of the Nebenkern during flagellum elongation; the major mitochondrial derivative is ovoid and darker than the minor derivative.","definition_xrefs":["PMID:24211517","PMID:30802236","GOC:mah","PMID:17123504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial derivative","termid":"GO:0016007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"major mitochondrial derivative","termid":"GO:0016008"}


id: PBO:0058506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5696","termid":"PBO:0058506"}


id: MOD:00153
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 3'-(8alpha-FAD)-L-histidine.","definition_xrefs":["Unimod:50#H","RESID:AA0144","PubMed:8076","PubMed:241294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(8alpha-FAD)-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(3-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]imidazol-4-yl)propanoic acid","type":"exact"},{"name":"3'-(8alpha-FAD)-L-histidine","type":"exact"},{"name":"8alpha-(N(delta)-histidyl)FAD","type":"exact"},{"name":"8alpha-(N3'-histidyl)FAD","type":"exact"},{"name":"8alpha-N1-histidyl FAD","type":"related"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES Pros-8alpha-FAD histidine","type":"exact"},{"name":"N(pi)-(8alpha-FAD)-histidine","type":"exact"},{"name":"Np8aFADHis","type":"exact"},{"name":"pros-(8alpha-FAD)-histidine","type":"exact"}],"termid":"MOD:00153"}


id: PBO:0047551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 9","termid":"PBO:0047551"}


id: PBO:0051491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 9","termid":"PBO:0051491"}


id: GO:0033593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex formed of BRCA2 and MAGE-D1; may mediate the synergistic activities of the two proteins in regulating cell growth.","definition_xrefs":["PMID:15930293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BRCA2-MAGE-D1 complex","termid":"GO:0033593"}


id: MONDO:0004444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of bladder carcinoma characterized by the presence of malignant glandular epithelial cells and clear cells forming a tubulo-cystic pattern.","definition_xrefs":["NCIT:C39847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder clear cell adenocarcinoma","termid":"MONDO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder tubulo-cystic clear cell adenocarcinoma","secondary_identifiers":["MEDGEN:267060","DOID:8050","UMLS:C1511203"],"synonyms":[{"name":"bladder tubulo-cystic clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0004444","xrefs":{"Monarch":{"xref_id":"0004444"}}}


id: PBO:0057910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3613","termid":"PBO:0057910"}


id: PBO:0057648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1244-1","termid":"PBO:0057648"}


id: FYPO:0001890
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118957,118955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[118958,118956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[118943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level","termid":"FYPO:0000824"},{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"increased RNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation: increased","type":"related"},{"name":"increased RNA accumulation","type":"related"},{"name":"increased cellular RNA level","type":"exact"},{"name":"increased cellular mRNA level","type":"narrow"},{"name":"increased transcript level","type":"exact"}],"termid":"FYPO:0001890","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null,"FYPO:0004982":null}}


id: PBO:0051247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-78-1 (pseudogene)","termid":"PBO:0051247"}


id: GO:0090439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: 7-hydroxylauroyl-CoA + 3 malonyl-CoA + 2 H+ = 2-(8-hydroxy-2-oxotridecyl)-6-oxopyran-4-olate + 3 CO2 + 4 coenzyme A.","definition_xrefs":["PMID:21193570","MetaCyc:RXN-16407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"tetraketide alpha-pyrone synthase activity","termid":"GO:0090439"}


id: GO:0046013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of resting T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"T cell homeostatic proliferation","termid":"GO:0001777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell homeostatic proliferation","synonyms":[{"name":"regulation of T lymphocyte homeostatic proliferation","type":"exact"},{"name":"regulation of T-cell homeostatic proliferation","type":"exact"},{"name":"regulation of T-lymphocyte homeostatic proliferation","type":"exact"},{"name":"regulation of resting T cell proliferation","type":"exact"}],"termid":"GO:0046013"}


id: PBO:0084050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein for Gpa1p; regulates desensitization to alpha factor pheromone; also required to prevent receptor-independent signaling of the mating pathway; member of the RGS (regulator of G-protein signaling) family","termid":"PBO:0084050"}


id: GO:0032826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell differentiation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation","termid":"GO:0032823"},{"relation_name":"regulates","term_name":"natural killer cell differentiation involved in immune response","termid":"GO:0002325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell differentiation involved in immune response","synonyms":[{"name":"regulation of NK cell differentiation during immune response","type":"related"},{"name":"regulation of natural killer cell development involved in immune response","type":"related"},{"name":"regulation of natural killer cell differentiation during immune response","type":"related"}],"termid":"GO:0032826"}


id: MONDO:1012692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive hereditary neurodegenerative disorder that occurs in dogs and is characterized by neuronal degeneration and loss in the cerebellum, olivary nuclei, substantia nigra, and caudate nuclei due to a mutation in the SERAC1 gene.","definition_xrefs":["PMID:38003185","PMID:34490804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine multiple system degeneration, SERAC1-related, dog","secondary_identifiers":["OMIA:001468-9615"],"synonyms":[{"name":"CMSD","type":"exact"},{"name":"canine multiple system degeneration, dog","type":"related"}],"termid":"MONDO:1012692","xrefs":{"Monarch":{"xref_id":"1012692"}}}


id: MONDO:0006176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma characterized by the presence of a cribriform architectural pattern. Representative examples include the intraductal cribriform breast carcinoma and invasive cribriform breast carcinoma.","definition_xrefs":["NCIT:C3680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cribriform carcinoma","secondary_identifiers":["ICDO:8201/3","UMLS:C0205643","MEDGEN:104694","EFO:1000210"],"synonyms":[{"name":"cribriform carcinoma","type":"exact"}],"termid":"MONDO:0006176","xrefs":{"Monarch":{"xref_id":"0006176"}}}


id: PBO:0085927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole; identical to Pau21p; encodes two proteins that are translated from two different start codons","termid":"PBO:0085927"}


id: PBO:0027513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_carbendazim","termid":"PBO:0027513"}


id: FYPO:0005398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of occurrence of double-strand break repair via homologous recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:12628934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal double-strand break repair","termid":"FYPO:0001033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"normal frequency of double-strand break repair via homologous recombination","synonyms":[{"name":"normal frequency of double-strand break repair via homologous recombination during mitotic cell cycle","type":"related"},{"name":"normal frequency of double-strand break repair via homologous recombination during vegetative growth","type":"exact"},{"name":"normal occurrence of double-strand break repair via homologous recombination","type":"exact"}],"termid":"FYPO:0005398"}


id: GO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an opsonin, such as a complement component or antibody, deposited on the surface of a bacteria, virus, immune complex, or other particulate material.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"opsonin binding","termid":"GO:0001846"}


id: GO:0097389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 21 (CCL21) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 21 production","synonyms":[{"name":"CCL21 production","type":"exact"}],"termid":"GO:0097389"}


id: PBO:0086938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase; Myo2p-binding protein implicated in mother-to-bud transport of cortical endoplasmic reticulum (ER), late Golgi, and mitochondria during cell division; function is regulated at multiple levels; abundance of active Ypt11p forms is controlled by phosphorylation status and degradation; normally a low-abundance protein whose ER localization is only detected when protein is highly over expressed","termid":"PBO:0086938"}


id: PBO:0036345
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"URAcil requiring","termid":"PBO:0036345"}


id: SO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of six or seven consecutive residues that contains two H-bonds.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"schellmann_loop","secondary_identifiers":["BS:00226"],"synonyms":[{"name":"paperclip","type":"related"},{"name":"paperclip loop","type":"related"},{"name":"schellmann loop","type":"exact"}],"termid":"SO:0001123"}


id: PBO:0072326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 12","termid":"PBO:0072326"}


id: MONDO:0700276
data:
  {"annotated_genes":["SJAG_00637","SJAG_04934"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85977,85978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011897"},{"annotations":[85963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009910"}]},"cv_name":"mondo","definition":"Disorder in which the cause of disease is a variation in the POLR3A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_04934":null},"genotype_count":0,"is_obsolete":false,"name":"POLR3A-related disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700276","terms_by_termid":{"MONDO:0009910":null,"MONDO:0011897":null},"xrefs":{"Monarch":{"xref_id":"0700276"}}}


id: MONDO:0002901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"blood group incompatibility","secondary_identifiers":["CSP:0440-3703","UMLS:C0005806","MEDGEN:609","DOID:4176"],"termid":"MONDO:0002901","xrefs":{"Monarch":{"xref_id":"0002901"}}}


id: GO:0001002
data:
  {"annotated_genes":["SJAG_03354"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69576],"is_not":false,"summary":null,"term":"GO:0001002"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of DNA that is a part of a type 1 promoter that controls transcription by RNA polymerase III. Type 1 promoters are found in 5S rRNA genes, downstream of the transcription start site within the sequence of the mature RNA, and require TFIIIA for recognition.","definition_xrefs":["GOC:txnOH","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III cis-regulatory region sequence-specific DNA binding","termid":"GO:0000992"},{"relation_name":"is_a","term_name":"5S rDNA binding","termid":"GO:0080084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0000976","GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"RNA polymerase III type 1 promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0001030"],"synonyms":[{"name":"RNA polymerase III type 1 promoter DNA binding","type":"related"}],"termid":"GO:0001002","terms_by_termid":{"GO:0001002":null}}


id: PBO:0000255
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone","termid":"PBO:0000255"}


id: MONDO:0004800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of dacryoadenitis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dacryoadenitis","termid":"MONDO:0004804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic dacryoadenitis","secondary_identifiers":["DOID:949","MEDGEN:509857","UMLS:C0155224","SCTID:4760008","ICD9:375.02"],"synonyms":[{"name":"dacryoadenitis, chronic","type":"exact"}],"termid":"MONDO:0004800","xrefs":{"Monarch":{"xref_id":"0004800"}}}


id: GO:0060390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of SMAD protein signal transduction.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"SMAD protein signal transduction","termid":"GO:0060395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of SMAD protein signal transduction","secondary_identifiers":["GO:0007184"],"synonyms":[{"name":"SMAD protein import into nucleus","type":"narrow"},{"name":"regulation of SMAD protein nuclear translocation","type":"narrow"}],"termid":"GO:0060390"}


id: GO:2001284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of BMP secretion.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"BMP secretion","termid":"GO:0038055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of BMP secretion","synonyms":[{"name":"regulation of BMP protein secretion","type":"exact"},{"name":"regulation of bone morphogenetic protein secretion","type":"exact"}],"termid":"GO:2001284"}


id: PBO:0028171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_pyrophosphohydrolase_activity","termid":"PBO:0028171"}


id: PBO:0080700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNT5A antisense RNA 1","termid":"PBO:0080700"}


id: GO:0034301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell gives rise to an endospore, a dormant, highly resistant spore with a thick wall that forms within the mother cell. Endospores are produced by some low G+C Gram-positive bacteria in response to harsh conditions.","definition_xrefs":["GOC:ds","ISBN:0470090278","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endospore formation","termid":"GO:0034301"}


id: FYPO:0001412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfide (S2-, also called acid labile sulfide) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered cellular sulfide level","termid":"FYPO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular sulfide level","synonyms":[{"name":"decreased cellular acid labile sulfide level","type":"exact"},{"name":"decreased cellular sulfide accumulation","type":"related"},{"name":"decreased cellular sulfide ion level","type":"exact"},{"name":"decreased cellular sulfide level during mitotic cell cycle","type":"related"},{"name":"decreased cellular sulfide level during vegetative growth","type":"exact"},{"name":"decreased cellular sulphide level","type":"exact"},{"name":"reduced cellular sulfide level","type":"exact"}],"termid":"FYPO:0001412"}


id: PBO:0064380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 2","termid":"PBO:0064380"}


id: PBO:0003342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1242 family protein, secretory pathway component Ksh1 (predicted)","termid":"PBO:0003342"}


id: GO:0102380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: steviolbioside + UDP-alpha-D-glucose = H+ + rebaudioside B + UDP.","definition_xrefs":["RHEA:61752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"steviolbioside glucosyltransferase activity (rebaudioside B forming)","secondary_identifiers":["MetaCyc:RXN-13516"],"termid":"GO:0102380"}


id: PBO:0042169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCM2 like scaffold protein","termid":"PBO:0042169"}


id: PBO:0070434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPGR interacting protein 1","termid":"PBO:0070434"}


id: GO:0010402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pectic arabinan, a polymer with an alpha-(1->5)-linked L-arabinofuranose (Araf) backbone that can be substituted with Araf-alpha-(1->2)-, Araf-alpha-(1->3)-, and/or Araf-alpha-(1->3)-Araf-alpha-(1->3)-side chains. Arabinan can be found as a side chain of the pectin rhamnogalacturonan I.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan I side chain metabolic process","termid":"GO:0010400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"pectic arabinan metabolic process","synonyms":[{"name":"pectic arabinan metabolism","type":"exact"}],"termid":"GO:0010402"}


id: GO:0031031
data:
  {"annotated_genes":["SJAG_03936","SJAG_01805","SJAG_00082","SJAG_03048","SJAG_04776"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87326,89791,93604,102181,110318],"is_not":false,"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of septation initiation signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of division septum assembly","termid":"GO:0010973"},{"relation_name":"is_a","term_name":"regulation of septation initiation signaling","termid":"GO:0031029"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"septation initiation signaling","termid":"GO:0031028"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03936":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"positive regulation of septation initiation signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of septation initiation signaling","type":"narrow"},{"name":"positive regulation of septation initiation network","type":"exact"},{"name":"positive regulation of septation initiation signaling cascade","type":"related"},{"name":"positive regulation of septation initiation signalling","type":"exact"},{"name":"stimulation of septation initiation signaling","type":"narrow"},{"name":"up regulation of septation initiation signaling","type":"exact"},{"name":"up-regulation of septation initiation signaling","type":"exact"},{"name":"upregulation of septation initiation signaling","type":"exact"}],"termid":"GO:0031031","terms_by_termid":{"GO:0031031":null}}


id: MONDO:1011516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma, non-human animal","termid":"MONDO:1011457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, rabbit","secondary_identifiers":["OMIA:000411-9986"],"termid":"MONDO:1011516","xrefs":{"Monarch":{"xref_id":"1011516"}}}


id: PBO:0074297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLU7 homolog, splicing factor","termid":"PBO:0074297"}


id: GO:0003431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a growth plate cartilage chondrocyte over time from after its fate commitment to the mature cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocyte development involved in endochondral bone morphogenesis","termid":"GO:0003433"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte differentiation","termid":"GO:0003418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte development","termid":"GO:0003431"}


id: PBO:0111796
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG repeat","termid":"PBO:0111796"}


id: PBO:0081427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 281","termid":"PBO:0081427"}


id: PR:O36033
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tetratricopeptide repeat protein 27 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat-containing protein C19B12.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.01","secondary_identifiers":["UniProtKB:O36033"],"synonyms":[{"name":"Spom972h-TTC27","type":"exact"}],"termid":"PR:O36033"}


