# terms

id: PBO:0077719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 3","termid":"PBO:0077719"}


id: GO:0034539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,3',5,5'-tetrabromobisphenol A + 2 H+ + 2 e- = 3,3',5-tribromobisphenol A + HBr.","definition_xrefs":["UM-BBD_reactionID:r0821"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,3',5,5'-tetrabromobisphenol A reductive dehalogenase activity (obsolete GO:0034539)","termid":"GO:0034539"}


id: GO:0080022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary root over time, from its formation to the mature structure. The primary root develops directly from the embryonic radicle.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary root development","termid":"GO:0080022"}


id: FYPO:0004979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one septum, is longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"monoseptate","termid":"FYPO:0001225"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"elongated monoseptate vegetative cell","synonyms":[{"name":"elongated monoseptate cell during mitotic cell cycle","type":"related"},{"name":"elongated monoseptate cell during vegetative growth","type":"exact"},{"name":"long monoseptate cell","type":"exact"}],"termid":"FYPO:0004979"}


id: PBO:0047200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 217 member A","termid":"PBO:0047200"}


id: FYPO:0004118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that has one or more septa with normal size, shape, or structure, and that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PMID:15116432","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal septum morphology","termid":"FYPO:0006213"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"},{"relation_name":"is_a","term_name":"normal septum morphology","termid":"FYPO:0006213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, normal septum morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, normal septum morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, normal septum morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, normal septum morphology","type":"exact"}],"termid":"FYPO:0004118"}


id: MONDO:0044617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"excluded_subClassOf","term_name":"obsolete dysostosis of genetic origin (obsolete MONDO:0018454)","termid":"MONDO:0018454"},{"relation_name":"excluded_subClassOf","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"excluded_subClassOf","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked keloid scarring-reduced joint mobility-increased optic cup-to-disc ratio syndrome","secondary_identifiers":["Orphanet:482606","GARD:21990","MEDGEN:1798943","UMLS:C5567520"],"termid":"MONDO:0044617","xrefs":{"Monarch":{"xref_id":"0044617"}}}


id: PBO:0075376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 13","termid":"PBO:0075376"}


id: PBO:0030065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphoglycerate_mutase_activity","termid":"PBO:0030065"}


id: GO:0003218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a left cardiac ventricle from unspecified parts.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac ventricle formation","termid":"GO:0003211"},{"relation_name":"part_of","term_name":"cardiac left ventricle morphogenesis","termid":"GO:0003214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac left ventricle formation","termid":"GO:0003218"}


id: GO:0005834
data:
  {"annotated_genes":["SJAG_02233","SJAG_03081","SJAG_02444","SJAG_04026"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74110,75123,80133,106292],"is_not":false,"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G protein-coupled receptors to an effector protein.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"},{"relation_name":"part_of","term_name":"extrinsic component of cytoplasmic side of plasma membrane","termid":"GO:0031234"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02233":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"heterotrimeric G-protein complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"heterotrimeric G-protein GTPase activity","type":"related"},{"name":"heterotrimeric G-protein GTPase, alpha-subunit","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, beta-subunit","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, gamma-subunit","type":"narrow"}],"termid":"GO:0005834","terms_by_termid":{"GO:0005834":null}}


id: PBO:0068818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 56, pseudogene","termid":"PBO:0068818"}


id: MONDO:0002492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sudden and sustained deterioration of the kidney function characterized by decreased glomerular filtration rate, increased serum creatinine or oliguria.","definition_xrefs":["NCIT:C26808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney failure","termid":"MONDO:0001106"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"acute kidney failure","secondary_identifiers":["MEDGEN:388570","UMLS:C2609414","MESH:D058186","ICD10CM:N17","DOID:3021","icd11.foundation:476391827"],"synonyms":[{"name":"AKI","type":"exact"},{"name":"ARF","type":"exact"},{"name":"acute kidney injury","type":"exact"},{"name":"acute renal failure","type":"exact"},{"name":"kidney failure, acute","type":"exact"}],"termid":"MONDO:0002492","xrefs":{"Monarch":{"xref_id":"0002492"}}}


id: MONDO:0018938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease belonging to the group of mucopolysaccharidoses, and characterized by spondylo-epiphyso-metaphyseal dysplasia. It exists in two forms, A and B.","definition_xrefs":["Orphanet:582"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"mucopolysaccharidosis","termid":"MONDO:0019249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"mucopolysaccharidosis type 4","secondary_identifiers":["NANDO:2200550","NORD:1455","MedDRA:10028095","UMLS:C0026707","icd11.foundation:2078241550","DOID:12804","MEDGEN:44513","SCTID:378007","GARD:12562","NCIT:C61263","NANDO:1200105"],"synonyms":[{"name":"MPS IV - Morquio syndrome A","type":"narrow"},{"name":"MPS IV - Morquio syndrome B","type":"narrow"},{"name":"MPS4","type":"exact"},{"name":"MPSIV","type":"exact"},{"name":"Morquio A disease","type":"narrow"},{"name":"Morquio disease","type":"exact"},{"name":"Morquio syndrome","type":"exact"},{"name":"Morquio syndrome A","type":"narrow"},{"name":"Mucopolysaccharidosis IV","type":"exact"},{"name":"chondroosteodystrophy","type":"narrow"},{"name":"deficiency of N-acetylgalactosamine-6-sulphatase","type":"narrow"},{"name":"deficiency of chondroitinsulphatase","type":"exact"},{"name":"eccentro-osteochondrodysplasia","type":"exact"},{"name":"eccentrochondrodysplasia","type":"exact"},{"name":"eccentroosteochondrodysplasia","type":"exact"},{"name":"galactosamine-6-sulfatase deficiency","type":"narrow"},{"name":"mucopolysaccharidosis IV","type":"exact"},{"name":"mucopolysaccharidosis type 4","type":"exact"},{"name":"mucopolysaccharidosis type IV","type":"exact"},{"name":"mucopolysaccharidosis type IVA","type":"narrow"},{"name":"mucopolysaccharidosis type IVB","type":"narrow"},{"name":"mucopolysaccharidosis, MPS-IV","type":"exact"},{"name":"mucopolysaccharidosis, MPS-IV-A","type":"narrow"},{"name":"osteochondrodystrophy","type":"narrow"}],"termid":"MONDO:0018938","xrefs":{"Monarch":{"xref_id":"0018938"}}}


id: PBO:0050939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 10","termid":"PBO:0050939"}


id: GO:0031702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 angiotensin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiotensin receptor binding","termid":"GO:0031701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 1 angiotensin receptor binding","synonyms":[{"name":"AT1 receptor binding","type":"exact"},{"name":"type 1 angiotensin receptor ligand","type":"narrow"}],"termid":"GO:0031702"}


id: MONDO:0004838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"orthostatic proteinuria","secondary_identifiers":["ICD9:593.6","DOID:9617","icd11.foundation:2144070055","MEDGEN:534880","UMLS:C0232867"],"synonyms":[{"name":"postural albuminuria","type":"exact"}],"termid":"MONDO:0004838","xrefs":{"Monarch":{"xref_id":"0004838"}}}


id: GO:0031522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex involved in the translocation of proteins across the cytoplasmic membrane. In Gram-negative bacteria, Sec-translocated proteins are subsequently secreted via the type II, IV, or V secretion systems. Sec complex components include SecA, D, E, F, G, Y and YajC.","definition_xrefs":["GOC:mtg_sensu","PMID:15223057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cell envelope Sec protein transport complex","synonyms":[{"name":"Sec complex","type":"broad"},{"name":"Sec secretion complex","type":"narrow"},{"name":"Sec translocation complex","type":"narrow"},{"name":"plasma membrane Sec complex","type":"related"}],"termid":"GO:0031522"}


id: PBO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial heat shock protein Hsp60/Mcp60","termid":"PBO:0000300"}


id: GO:0060566
data:
  {"annotated_genes":["SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of DNA-templated transcription termination, the process in which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA.","definition_xrefs":["GOC:txnOH","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of termination of DNA-templated transcription","termid":"GO:0031554"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex disassembly","termid":"GO:0043243"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"positively_regulates","term_name":"DNA-templated transcription termination","termid":"GO:0006353"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"positive regulation of termination of DNA-templated transcription","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of DNA-dependent transcription, termination","type":"exact"},{"name":"positive regulation of DNA-templated transcription, termination","type":"exact"},{"name":"positive regulation of termination of DNA-dependent transcription","type":"exact"},{"name":"positive regulation of transcription termination, DNA-dependent","type":"exact"}],"termid":"GO:0060566","terms_by_termid":{"GO:1904595":null}}


id: PBO:0085524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S25, no bacterial homolog; RPS25B has a paralog, RPS25A, that arose from the whole genome duplication","termid":"PBO:0085524"}


id: PBO:0041543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 107","termid":"PBO:0041543"}


id: PBO:0056855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIA-RAB4B readthrough (NMD candidate)","termid":"PBO:0056855"}


id: PBO:0043046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHORDC1 pseudogene 3","termid":"PBO:0043046"}


id: GO:0003308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell, resulting a change in cell state that contributes to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway involved in heart development","termid":"GO:0003307"},{"relation_name":"is_a","term_name":"negative regulation of Wnt signaling pathway","termid":"GO:0030178"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"Wnt signaling pathway involved in heart development","termid":"GO:0003306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Wnt signaling pathway involved in heart development","synonyms":[{"name":"negative regulation of Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway involved in heart development","type":"exact"}],"termid":"GO:0003308"}


id: GO:1903864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a P granule into its constituent components.","definition_xrefs":["PMID:25535836","GOC:TermGenie","GOC:kmv","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P granule organization","termid":"GO:0030719"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"P granule disassembly","synonyms":[{"name":"germline granule disassembly","type":"exact"},{"name":"polar granule disassembly","type":"exact"}],"termid":"GO:1903864"}


id: GO:0045197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell.","definition_xrefs":["GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of apical/basal cell polarity","termid":"GO:0035088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of epithelial cell apical/basal polarity","termid":"GO:0045197"}


id: PBO:0017981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-4-deoxychorismate lyase Abz2 (predicted)","termid":"PBO:0017981"}


id: SO:0001610
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An elongation of a polypeptide sequence at the C terminus deriving from a sequence variant extending the CDS.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"CDS_three_prime_extension","termid":"SO:0002229"},{"relation_name":"is_a","term_name":"elongated_polypeptide","termid":"SO:0001609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_polypeptide_C_terminal","synonyms":[{"name":"elongated polypeptide C terminal","type":"exact"}],"termid":"SO:0001610"}


id: PBO:0086176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the normal accumulation of 25S and 5.8S rRNAs; nucleolar protein; associated with the 27SA2 pre-ribosomal particle; proposed to be involved in the biogenesis of the 60S ribosomal subunit","termid":"PBO:0086176"}


id: PBO:0079471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin actin binding protein 2","termid":"PBO:0079471"}


id: GO:1901493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a decalin stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to decalin","termid":"GO:1901493"}


id: MONDO:0019788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-functioning paraganglioma is a rare neuroendocrine tumor arising from neural crest-derived paraganglion cells (most often in the para-aortic region at the level of renal hilia, organ of Zuckerkandl, thoracic paraspinal region, bladder, and carotid body) not associated with catecholamine secretion. These tumors are usually clinically silent and symptoms, if present, are nonspecific and depend on the location of the tumor. Association with certain hereditary cancer-predisposing syndromes, such as multiple endocrine neoplasia, neurofibromatosis type 1 or von Hippel Lindau syndrome, may be observed.","definition_xrefs":["Orphanet:94080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-secreting paraganglioma","secondary_identifiers":["MEDGEN:1634671","GARD:19248","SCTID:764999002","UMLS:C4707263"],"synonyms":[{"name":"non-functioning paraganglioma","type":"related"}],"termid":"MONDO:0019788","xrefs":{"Monarch":{"xref_id":"0019788"}}}


id: PBO:0067532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 676, pseudogene","termid":"PBO:0067532"}


id: PBO:0089688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase alpha subunit","termid":"PBO:0089688"}


id: MONDO:0013614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertelorism-preauricular sinus-punctual pits-deafness syndrome","secondary_identifiers":["GARD:17351","OMIM:614187","Orphanet:293958","UMLS:C4751125","MEDGEN:1659106"],"synonyms":[{"name":"HPPD","type":"exact"},{"name":"hypertelorism, preauricular sinus, punctal pits, and deafness","type":"related"},{"name":"hypertelorism-preauricular sinus-punctual pits-hearing loss syndrome","type":"exact"}],"termid":"MONDO:0013614","xrefs":{"Monarch":{"xref_id":"0013614"}}}


id: PBO:0077524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 238 like","termid":"PBO:0077524"}


id: PBO:0063791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 20","termid":"PBO:0063791"}


id: GO:0005506
data:
  {"annotated_genes":["SJAG_04297","SJAG_03018","SJAG_04016","SJAG_03862","SJAG_03509","SJAG_00309","SJAG_04743","SJAG_05311","SJAG_01418","SJAG_00532","SJAG_03222","SJAG_00827","SJAG_03658","SJAG_00792","SJAG_03249","SJAG_00642","SJAG_03225","SJAG_03943","SJAG_04054","SJAG_00221","SJAG_04913","SJAG_03750","SJAG_00717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57069,57132,58690,59017,59559,59900,60044,61736,63447,67409,67954,73516,74958,77352,79642,93860,112589,117157],"is_not":false,"summary":null,"term":"GO:0005506"},{"annotations":[71325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008199"},{"annotations":[71324,100378,77799,101023,66739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008198"}]},"cv_name":"molecular_function","definition":"Binding to an iron (Fe) ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00309":null,"SJAG_00532":null,"SJAG_00642":null,"SJAG_00717":null,"SJAG_00792":null,"SJAG_00827":null,"SJAG_01418":null,"SJAG_03018":null,"SJAG_03222":null,"SJAG_03225":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03658":null,"SJAG_03750":null,"SJAG_03862":null,"SJAG_03943":null,"SJAG_04016":null,"SJAG_04054":null,"SJAG_04297":null,"SJAG_04743":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0046872","GO:0003674"],"is_obsolete":false,"name":"iron ion binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"iron binding","type":"exact"}],"termid":"GO:0005506","terms_by_termid":{"GO:0005506":null,"GO:0008198":null,"GO:0008199":null}}


id: MONDO:0006666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tissue degeneration and diminished size of the thyroid gland.","definition_xrefs":["NCIT:C26942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrophy of thyroid","secondary_identifiers":["MedDRA:10043693","EFO:1000827","ICD9:246.8","SCTID:190309006","UMLS:C2981141","MEDGEN:453383","icd11.foundation:1827568994"],"synonyms":[{"name":"thyroid atrophy","type":"exact"},{"name":"thyroid gland atrophy","type":"exact"}],"termid":"MONDO:0006666","xrefs":{"Monarch":{"xref_id":"0006666"}}}


id: MONDO:0033864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile hypotonia-oculomotor anomalies-hyperkinetic movements-developmental delay syndrome","secondary_identifiers":["GARD:17962","MEDGEN:1648431","UMLS:C4748715","OMIM:618218","Orphanet:522077"],"synonyms":[{"name":"Baker-Gordon syndrome","type":"exact"}],"termid":"MONDO:0033864","xrefs":{"Monarch":{"xref_id":"0033864"}}}


id: MONDO:1040052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by autosomal recessive variants in the PROM1 gene.","definition_xrefs":["PMID:38072963","PMID:10587575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"PROM1-related retinopathy","termid":"MONDO:1040056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"PROM1-related recessive retinopathy","synonyms":[{"name":"PROM1-related recessive retinopathy","type":"exact"}],"termid":"MONDO:1040052","xrefs":{"Monarch":{"xref_id":"1040052"}}}


id: FYPO:0001820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing lithium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on lithium","synonyms":[{"name":"normal cell population growth in presence of lithium ions","type":"exact"},{"name":"normal cell population growth on lithium","type":"exact"},{"name":"normal cell population growth on lithium ion","type":"exact"},{"name":"normal cellular response to lithium ion","type":"related"},{"name":"normal growth on lithium ion","type":"exact"},{"name":"normal vegetative cell population growth on lithium ion","type":"exact"}],"termid":"FYPO:0001820"}


id: GO:0047041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-carnitine + NAD+ = 3-dehydrocarnitine + H+ + NADH.","definition_xrefs":["RHEA:11556","EC:1.1.1.254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(S)-carnitine 3-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.254-RXN","KEGG_REACTION:R01921"],"synonyms":[{"name":"(S)-carnitine:NAD+ oxidoreductase activity","type":"related"},{"name":"D-carnitine dehydrogenase activity","type":"related"}],"termid":"GO:0047041"}


id: GO:0048137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The meiotic divisions undergone by the primary and secondary spermatocytes to produce haploid spermatids.","definition_xrefs":["GOC:jid","GOC:pr","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatocyte division","synonyms":[{"name":"spermatocyte cell division","type":"exact"}],"termid":"GO:0048137"}


id: PBO:0075161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 17","termid":"PBO:0075161"}


id: MONDO:0030716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 66","secondary_identifiers":["DOID:0070565","UMLS:C5676945","MEDGEN:1806298","OMIM:619799"],"synonyms":[{"name":"SPGF66","type":"exact"},{"name":"spermatogenic failure 66","type":"exact"}],"termid":"MONDO:0030716","xrefs":{"Monarch":{"xref_id":"0030716"}}}


id: MONDO:0000499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior ischemic optic neuropathy","termid":"MONDO:0006649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-arteritic anterior ischemic optic neuropathy","secondary_identifiers":["icd11.foundation:8640162","UMLS:C1852242","DOID:0050864","MEDGEN:338887","Orphanet:415300"],"synonyms":[{"name":"NAION","type":"exact"},{"name":"non-arteritic aion","type":"exact"},{"name":"nonarteritic anterior ischaemic optic neuropathy","type":"exact"},{"name":"nonarteritic anterior ischemic optic neuropathy","type":"exact"}],"termid":"MONDO:0000499","xrefs":{"Monarch":{"xref_id":"0000499"}}}


id: GO:0050666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving homocysteine, the amino acid alpha-amino-gamma-mercaptobutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of sulfur amino acid metabolic process","termid":"GO:0031335"},{"relation_name":"regulates","term_name":"homocysteine metabolic process","termid":"GO:0050667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"regulation of homocysteine metabolic process","synonyms":[{"name":"regulation of Hcy metabolic process","type":"exact"},{"name":"regulation of Hcy metabolism","type":"exact"},{"name":"regulation of homocysteine metabolism","type":"exact"}],"termid":"GO:0050666"}


id: PBO:0054876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2290","termid":"PBO:0054876"}


id: PBO:0080312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 76 pseudogene","termid":"PBO:0080312"}


id: MONDO:0003657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete methotrexate-associated lymphoproliferation (obsolete MONDO:0003657)","termid":"MONDO:0003657","xrefs":{"Monarch":{"xref_id":"0003657"}}}


id: GO:0021887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a hypothalamus neuron that releases gonadotrophin-releasing hormone.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:jid","PMID:12626695","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"hypothalamus gonadotrophin-releasing hormone neuron differentiation","termid":"GO:0021886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus gonadotrophin-releasing hormone neuron fate commitment","synonyms":[{"name":"hypothalamus gonadotropin-releasing hormone neuron fate commitment","type":"related"}],"termid":"GO:0021887"}


id: GO:0015216
data:
  {"annotated_genes":["SJAG_03334","SJAG_02050","SJAG_04328","SJAG_00612","SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[101160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[58920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[102650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[75343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001409"},{"annotations":[75450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051724"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a purine nucleotide, any compound consisting of a purine nucleoside esterified with (ortho)phosphate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"purine nucleotide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015216","terms_by_termid":{"GO:0001409":null,"GO:0005471":null,"GO:0046964":null,"GO:0051724":null,"GO:0140987":null,"GO:1902557":null}}


id: SO:0000065
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variation whereby an arm exists as an individual chromosome element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free_chromosome_arm","synonyms":[{"name":"free chromosome arm","type":"exact"}],"termid":"SO:0000065"}


id: FYECO:0000125
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown to exponential phase.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to exponential phase","termid":"FYECO:0000125"}


id: PBO:0078999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 6-1","termid":"PBO:0078999"}


id: GO:0008569
data:
  {"annotated_genes":["SJAG_04745","SJAG_02286","SJAG_01546","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66088,94572,96575,99042],"is_not":false,"summary":null,"term":"GO:0008569"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microtubule toward the minus end, driven by ATP hydrolysis.","definition_xrefs":["PMID:32842864","PMID:15659646","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule motor activity","termid":"GO:0003777"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_02286":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003774","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"minus-end-directed microtubule motor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent microtubule motor activity, minus-end-directed","type":"exact"},{"name":"ATP-dependent minus-end-directed microtubule motor activity","type":"exact"},{"name":"dynein ATPase","type":"narrow"},{"name":"kinesin ATP phosphohydrolase (minus-end-directed)","type":"narrow"},{"name":"microtubule motor activity, minus-end-directed","type":"exact"},{"name":"minus-end-directed ATP-dependent microtubule motor activity","type":"exact"},{"name":"minus-end-directed kinesin ATPase activity","type":"narrow"}],"termid":"GO:0008569","terms_by_termid":{"GO:0008569":null}}


id: MONDO:0013195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the TNNC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 13","secondary_identifiers":["UMLS:C2750472","MEDGEN:442487","DOID:0110319","MESH:C567686","OMIM:613243"],"synonyms":[{"name":"CMH13","type":"exact"},{"name":"TNNC1 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 13","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 13","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 13","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 13","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in TNNC1","type":"exact"},{"name":"hypertrophic cardiomyopathy type 13","type":"exact"}],"termid":"MONDO:0013195","xrefs":{"Monarch":{"xref_id":"0013195"}}}


id: FYPO:0001164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing glucose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on glucose carbon source","synonyms":[{"name":"normal cell population growth on glucose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on dextrose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on glucose carbon source","type":"exact"}],"termid":"FYPO:0001164"}


id: PBO:0109400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 27, pseudogene","termid":"PBO:0109400"}


id: PBO:0017618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin-associated protein Pds5","termid":"PBO:0017618"}


id: PBO:0055324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2752","termid":"PBO:0055324"}


id: MONDO:0014906
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85939],"is_not":false,"summary":null,"term":"MONDO:0014906"}]},"cv_name":"mondo","definition":"An autosomal recessive sub-type of Charcot-Marie-Tooth disease caused by compound heterozygous or homozygous mutation(s) in the MFN2 gene, encoding mitofusin-2. This condition is more severe and has an earlier onset as compared to Charcot-Marie-Tooth disease type 2A2A.","definition_xrefs":["NCIT:C150647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2a2b;","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934692","OMIM:617087","DOID:0111557","UMLS:C4310725"],"synonyms":[{"name":"CMT2A2B","type":"related"},{"name":"Charcot-Marie-Tooth disease type 2A2B","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2A2B","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2A2B","type":"exact"}],"termid":"MONDO:0014906","terms_by_termid":{"MONDO:0014906":null},"xrefs":{"Monarch":{"xref_id":"0014906"}}}


id: PBO:0066812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 111","termid":"PBO:0066812"}


id: PBO:0116968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein, translation activator for Cox1 Ppr4","termid":"PBO:0116968"}


id: PBO:0063835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phytanoyl-CoA 2-hydroxylase interacting protein","termid":"PBO:0063835"}


id: PBO:0005099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP215/Dis1 family","termid":"PBO:0005099"}


id: PBO:0027038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_at_centromere_central_core","termid":"PBO:0027038"}


id: PBO:0038577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRAXAS1 pseudogene 2","termid":"PBO:0038577"}


id: MONDO:0002350
data:
  {"annotated_genes":["SJAG_03361","SJAG_04000","SJAG_01185","SJAG_00093","SJAG_01374","SJAG_04148","SJAG_03182","SJAG_04017","SJAG_00864","SJAG_04013","SJAG_00933","SJAG_04621","SJAG_00471","SJAG_03986"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[84896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[85702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014752"},{"annotations":[85626,85627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014817"},{"annotations":[85625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014818"},{"annotations":[86186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032580"},{"annotations":[86188,86187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032581"},{"annotations":[86184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032582"},{"annotations":[85712,85711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026726"},{"annotations":[84813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014099"},{"annotations":[85631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014257"}]},"cv_name":"mondo","definition":"An instance of nephrotic syndrome that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrotic syndrome","termid":"MONDO:0005377"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00471":null,"SJAG_00864":null,"SJAG_00933":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_03182":null,"SJAG_03361":null,"SJAG_03986":null,"SJAG_04000":null,"SJAG_04013":null,"SJAG_04017":null,"SJAG_04148":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"familial nephrotic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:48796009","icd11.foundation:1524476844","UMLS:C3501848","NCIT:C35337","DOID:2590","MEDGEN:502251","OMIMPS:256300"],"synonyms":[{"name":"congenital nephrotic syndrome","type":"exact"},{"name":"hereditary nephrotic syndrome","type":"exact"}],"termid":"MONDO:0002350","terms_by_termid":{"MONDO:0011303":null,"MONDO:0013836":null,"MONDO:0014099":null,"MONDO:0014257":null,"MONDO:0014752":null,"MONDO:0014817":null,"MONDO:0014818":null,"MONDO:0026726":null,"MONDO:0032580":null,"MONDO:0032581":null,"MONDO:0032582":null},"xrefs":{"Monarch":{"xref_id":"0002350"}}}


id: PATO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000368 towards1 (obsolete PATO:0000368)","termid":"PATO:0000368"}


id: FYPO:0004174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation does not occur in cells of the h+ mating type.","definition_xrefs":["PMID:9003326","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterile","termid":"FYPO:0000280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"h+ specific sterility","synonyms":[{"name":"h+-specific sterility","type":"exact"},{"name":"h-plus-specific mating defect","type":"related"},{"name":"h-plus-specific sterility","type":"exact"}],"termid":"FYPO:0004174"}


id: FYPO:0009025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing isoleucine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth on isoleucine nitrogen source","synonyms":[{"name":"increased growth on isoleucine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on isoleucine nitrogen source","type":"exact"}],"termid":"FYPO:0009025"}


id: PBO:0041711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin like 3","termid":"PBO:0041711"}


id: PBO:0047692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fms related receptor tyrosine kinase 4","termid":"PBO:0047692"}


id: MONDO:0013854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the CCDC103 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 17","secondary_identifiers":["MEDGEN:762261","OMIM:614679","GARD:15835","UMLS:C3542550","DOID:0110621"],"synonyms":[{"name":"CCDC103 primary ciliary dyskinesia","type":"exact"},{"name":"CILD17","type":"exact"},{"name":"ciliary dyskinesia, primary, 17","type":"related"},{"name":"ciliary dyskinesia, primary, 17, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 17","type":"exact"},{"name":"primary ciliary dyskinesia 17","type":"exact"},{"name":"primary ciliary dyskinesia 17 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in CCDC103","type":"exact"},{"name":"primary ciliary dyskinesia type 17","type":"exact"}],"termid":"MONDO:0013854","xrefs":{"Monarch":{"xref_id":"0013854"}}}


id: SO:0002069
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of a LINE1 mobile element with respect to a reference.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L1_LINE_retrotransposon","termid":"SO:0002272"},{"relation_name":"is_a","term_name":"mobile_element_deletion","termid":"SO:0002066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINE1_deletion","synonyms":[{"name":"LINE1 deletion","type":"related"}],"termid":"SO:0002069"}


id: PBO:0034419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_regulation_by_(obsolete_requires_regulation_by)","termid":"PBO:0034419"}


id: PBO:0071820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 15","termid":"PBO:0071820"}


id: PBO:0082349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; has strong preference for dsRNA; remodels RNA-protein complex (RNP) to facilitate efficient transcription termination ; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may be involved in suppression of transcription from cryptic initiation sites","termid":"PBO:0082349"}


id: MONDO:0000674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to acknowledge objects in the neglected field that are visible when a mirror reflects the object visible in the non-neglected field.","definition_xrefs":["DOID:0060144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mirror agnosia","termid":"MONDO:0000674","xrefs":{"Monarch":{"xref_id":"0000674"}}}


id: PBO:0111776
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 family","termid":"PBO:0111776"}


id: PBO:0077155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLCD4-RWDD3 readthrough","termid":"PBO:0077155"}


id: GO:0035712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a T helper 2 cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:BHF","CL:0000546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 2 cell activation","synonyms":[{"name":"Th2 cell activation","type":"exact"}],"termid":"GO:0035712"}


id: PBO:0077036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THOC3 antisense RNA 1","termid":"PBO:0077036"}


id: PATO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000378 absolute frequency value (obsolete PATO:0000378)","termid":"PATO:0000378"}


id: MOD:00037
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine  residue to one of the diastereomeric 5-hydroxy-L-lysine  residues.","definition_xrefs":["ChEBI:60175","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated lysine","termid":"MOD:01047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxy-L-lysine","synonyms":[{"name":"5-hydroxylated L-lysine","type":"exact"},{"name":"5HyLys","type":"exact"}],"termid":"MOD:00037"}


id: PBO:0090789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII vesicle coat component Erp5/Erp6/Erp1","termid":"PBO:0090789"}


id: GO:0045179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region that lies just beneath the plasma membrane on the apical edge of a cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"apical cortex","termid":"GO:0045179"}


id: GO:1901329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of odontoblast differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"odontoblast differentiation","termid":"GO:0071895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of odontoblast differentiation","termid":"GO:1901329"}


id: GO:0008078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of mesodermal cells from one site to another.","definition_xrefs":["GOC:dph","GOC:sat","GOC:mah","GOC:tb","PMID:25119047","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal cell migration","synonyms":[{"name":"mesoderm cell migration","type":"exact"}],"termid":"GO:0008078"}


id: GO:0051680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 6-alpha-maltosylglucose, also known as isopanose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide biosynthetic process","termid":"GO:0009312"},{"relation_name":"is_a","term_name":"6-alpha-maltosylglucose metabolic process","termid":"GO:0051679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"6-alpha-maltosylglucose biosynthetic process","synonyms":[{"name":"isopanose biosynthesis","type":"exact"},{"name":"isopanose biosynthetic process","type":"exact"}],"termid":"GO:0051680"}


id: GO:0003943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 4-sulfate groups of the N-acetyl-D-galactosamine 4-sulfate units of chondroitin sulfate and dermatan sulfate.","definition_xrefs":["EC:3.1.6.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"N-acetylgalactosamine-4-sulfatase activity","secondary_identifiers":["Reactome:R-HSA-1793207","Reactome:R-HSA-2282889","Reactome:R-HSA-9036065","Reactome:R-HSA-1606789","Wikipedia:Arylsulfatase_B","MetaCyc:3.1.6.12-RXN"],"synonyms":[{"name":"N-acetyl-D-galactosamine-4-sulfate 4-sulfohydrolase activity","type":"related"},{"name":"N-acetylgalactosamine 4-sulfate sulfohydrolase activity","type":"related"},{"name":"N-acetylgalactosamine-4-sulphatase activity","type":"exact"},{"name":"acetylgalactosamine 4-sulfatase activity","type":"related"},{"name":"arylsulfatase B","type":"exact"},{"name":"chondroitinsulfatase","type":"broad"}],"termid":"GO:0003943"}


id: GO:0033591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an L-ascorbic acid (vitamin C) stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-ascorbic acid","synonyms":[{"name":"response to L-ascorbate","type":"exact"},{"name":"response to ascorbic acid","type":"broad"},{"name":"response to vitamin C","type":"exact"}],"termid":"GO:0033591"}


id: PBO:0082842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constitutively expressed DL-glycerol-3-phosphate phosphatase; also known as glycerol-1-phosphatase; involved in glycerol biosynthesis, induced in response to both anaerobic and osmotic stress; GPP1 has a paralog, GPP2, that arose from the whole genome duplication","termid":"PBO:0082842"}


id: PBO:0060246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCBP2 antisense RNA 1","termid":"PBO:0060246"}


id: PBO:0059734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 8","termid":"PBO:0059734"}


id: PBO:0062178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OR4M2 overlapping transcript 1","termid":"PBO:0062178"}


id: GO:0052231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of phagocytosis in other organism involved in symbiotic interaction (obsolete GO:0052231)","synonyms":[{"name":"modulation of phagocytosis in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052231"}


id: GO:0033931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-alpha-D-galactosaminidic linkages in poly(D-galactosamine).","definition_xrefs":["EC:3.2.1.109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"endogalactosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.109-RXN"],"synonyms":[{"name":"galactosaminoglycan glycanohydrolase activity","type":"related"}],"termid":"GO:0033931"}


id: PBO:0044544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein","termid":"PBO:0044544"}


id: MONDO:0002868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucinous cystic neoplasm that arises from the intrahepatic or extrahepatic bile ducts and it is associated with an invasive carcinomatous component.","definition_xrefs":["NCIT:C4130"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bile duct adenocarcinoma","termid":"MONDO:0003193"},{"relation_name":"excluded_subClassOf","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"},{"relation_name":"is_a","term_name":"bile duct cystadenoma","termid":"MONDO:0003420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"bile duct mucinous cystic neoplasm with an associated invasive carcinoma","secondary_identifiers":["ICDO:8161/3","DOID:4075","MEDGEN:137737","UMLS:C0334286"],"synonyms":[{"name":"bile duct cystadenocarcinoma","type":"exact"},{"name":"bile duct cystadenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"bile duct mucinous cystic neoplasm with an associated invasive carcinoma","type":"exact"},{"name":"biliary cystadenocarcinoma","type":"broad"},{"name":"cystadenocarcinoma of bile duct","type":"exact"},{"name":"cystadenocarcinoma of the bile duct","type":"exact"}],"termid":"MONDO:0002868","xrefs":{"Monarch":{"xref_id":"0002868"}}}


id: MONDO:0017514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"split foot","termid":"MONDO:0017450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split foot, bilateral","secondary_identifiers":["icd11.foundation:1227623929","Orphanet:295126","ICD10CM:Q72.73","MEDGEN:1757565","UMLS:C2910315"],"termid":"MONDO:0017514","xrefs":{"Monarch":{"xref_id":"0017514"}}}


id: PBO:0011495
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.106","termid":"PBO:0011495"}


id: MONDO:0008533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extra tooth, erupted or unerupted, resembling or unlike the other teeth in the group to which it belongs. Its presence may cause malposition of adjacent teeth or prevent their eruption.","definition_xrefs":["MESH:D014096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teeth, supernumerary","secondary_identifiers":["MEDGEN:21210","ICD10CM:K00.1","SCTID:8666004","OMIM:187100","UMLS:C0040457"],"synonyms":[{"name":"teeth, supernumerary","type":"exact"}],"termid":"MONDO:0008533","xrefs":{"Monarch":{"xref_id":"0008533"}}}


id: GO:0007210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a serotonin receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to dopamine","termid":"GO:1903351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"serotonin receptor signaling pathway","synonyms":[{"name":"serotonin receptor signalling pathway","type":"exact"}],"termid":"GO:0007210"}


id: MONDO:0700167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sebaceous epithelioma occurring in a dog.","definition_xrefs":["NCIT:C176701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine sebaceous gland epithelioma","termid":"MONDO:0700167","xrefs":{"Monarch":{"xref_id":"0700167"}}}


id: GO:0014826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the vein. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The vein is a vessel carrying blood away from the capillary beds.","definition_xrefs":["GOC:mtg_muscle","MA:0000715","MSH:D014680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phasic smooth muscle contraction","termid":"GO:0014821"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vein smooth muscle contraction","termid":"GO:0014826"}


id: PBO:0054181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1555","termid":"PBO:0054181"}


id: GO:0102481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3D-3,5/4-trihydroxycyclohexane-1,2-dione + H2O = 5-deoxy-D-glucuronate + H+.","definition_xrefs":["RHEA:25836","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase activity","secondary_identifiers":["MetaCyc:RXN-14149","EC:3.7.1.22"],"termid":"GO:0102481"}


id: PBO:0036381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human CXorf56 and C15orf40 ortholog","termid":"PBO:0036381"}


id: GO:0120133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly of actin cortical patches.","definition_xrefs":["PMID:19962315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"negatively_regulates","term_name":"actin cortical patch assembly","termid":"GO:0000147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin cortical patch assembly","synonyms":[{"name":"down regulation of actin cortical patch assembly","type":"exact"},{"name":"down-regulation of actin cortical patch assembly","type":"exact"},{"name":"downregulation of actin cortical patch assembly","type":"exact"},{"name":"inhibition of actin cortical patch assembly","type":"narrow"}],"termid":"GO:0120133"}


id: PBO:0027238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_lovastatin","termid":"PBO:0027238"}


id: GO:1905117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ribonucleoside-diphosphate reductase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:24733891","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ribonucleoside-diphosphate reductase activity (obsolete GO:1905117)","synonyms":[{"name":"regulation of RNR","type":"related"},{"name":"regulation of adenosylcobalamin-dependent ribonucleotide reductase activity","type":"related"},{"name":"regulation of aerobic non-heme iron-dependent ribonucleotide reductase activity","type":"related"},{"name":"regulation of anaerobic iron-sulfur-dependent ribonucleotide reductase activity","type":"related"},{"name":"regulation of class I ribonucleotide reductase activity","type":"related"},{"name":"regulation of class II ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"regulation of class II ribonucleotide reductase activity","type":"related"},{"name":"regulation of class III ribonucleotide reductase activity","type":"related"},{"name":"regulation of nucleoside diphosphate reductase activity","type":"related"},{"name":"regulation of purine/pyrimidine nucleoside diphosphate reduction","type":"related"},{"name":"regulation of ribonucleoside 5'-diphosphate reductase activity","type":"related"},{"name":"regulation of ribonucleotide diphosphate reductase activity","type":"exact"},{"name":"regulation of ribonucleotide reductase activity","type":"broad"}],"termid":"GO:1905117"}


id: MONDO:0011924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial panic disorder","termid":"MONDO:0031240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panic disorder 2","secondary_identifiers":["UMLS:C1842922","MEDGEN:375048","OMIM:607853"],"synonyms":[{"name":"Pand2","type":"related"},{"name":"panic disorder 2","type":"exact"},{"name":"panic disorder susceptibility locus, chromosome 9Q-related","type":"related"},{"name":"panic disorder type 2","type":"exact"}],"termid":"MONDO:0011924","xrefs":{"Monarch":{"xref_id":"0011924"}}}


id: PBO:0086640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YDR476C is not an essential gene","termid":"PBO:0086640"}


id: MONDO:0013071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant Emery-Dreifuss muscular dystrophy in which the cause of the disease is a mutation in the SYNE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Emery-Dreifuss muscular dystrophy","termid":"MONDO:0020336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426","MONDO:0005267"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy 4, autosomal dominant","secondary_identifiers":["UMLS:C2751807","DOID:0070249","GARD:18206","MEDGEN:414476","OMIM:612998","MESH:C567831"],"synonyms":[{"name":"EDMD4","type":"related"},{"name":"EMERY-Dreifuss muscular dystrophy 4, autosomal dominant","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 4 with variable features","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 4, autosomal dominant","type":"exact"},{"name":"SYNE1 autosomal dominant Emery-Dreifuss muscular dystrophy","type":"exact"},{"name":"autosomal dominant Emery-Dreifuss muscular dystrophy caused by mutation in SYNE1","type":"exact"}],"termid":"MONDO:0013071","xrefs":{"Monarch":{"xref_id":"0013071"}}}


id: MONDO:0031060
data:
  {"annotated_genes":["SJAG_03891"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85544],"is_not":false,"summary":null,"term":"MONDO:0031060"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03891":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 29, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823993","UMLS:C5774220","OMIM:620047"],"synonyms":[{"name":"MCPH29","type":"exact"},{"name":"microcephaly 29, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0031060","terms_by_termid":{"MONDO:0031060":null},"xrefs":{"Monarch":{"xref_id":"0031060"}}}


id: PR:O43046
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase subunit F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13861:SF0","OMA:SCHPO03956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit F (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.18c","secondary_identifiers":["UniProtKB:O43046"],"synonyms":[{"name":"Spom972h-ATP6V1F","type":"exact"},{"name":"V-ATPase subunit F (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit F (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43046"}


id: GO:1900764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving emericellin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"xanthone-containing compound metabolic process","termid":"GO:2001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"emericellin metabolic process","synonyms":[{"name":"Variecoxanthone B metabolic process","type":"related"},{"name":"Variecoxanthone B metabolism","type":"related"},{"name":"emericellin metabolism","type":"exact"}],"termid":"GO:1900764"}


id: PBO:0067371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 472, pseudogene","termid":"PBO:0067371"}


id: MONDO:0013936
data:
  {"annotated_genes":["SJAG_01165"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87022],"is_not":false,"summary":null,"term":"MONDO:0013936"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX10 defect","termid":"MONDO:0100264"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01165":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0005244","MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 6A (Zellweger)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:766861","DOID:0080481","MESH:C566422","OMIM:614870","UMLS:C3553947","GARD:15864","NCIT:C155758"],"synonyms":[{"name":"PBD6A","type":"related"},{"name":"peroxisome biogenesis disorder 6A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 7","type":"related"},{"name":"peroxisome biogenesis disorder, complementation group B","type":"related"}],"termid":"MONDO:0013936","terms_by_termid":{"MONDO:0013936":null},"xrefs":{"Monarch":{"xref_id":"0013936"}}}


id: PBO:0068864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 104, pseudogene","termid":"PBO:0068864"}


id: PBO:0080092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 54","termid":"PBO:0080092"}


id: GO:0023066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the vascular system.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via vascular system (obsolete GO:0023066)","synonyms":[{"name":"signal transmission via vascular system","type":"exact"}],"termid":"GO:0023066"}


id: GO:0070636
data:
  {"annotated_genes":["SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90450],"is_not":false,"summary":null,"term":"GO:0070636"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinic acid riboside + H2O = nicotinic acid + D-ribose.","definition_xrefs":["GOC:mah","PMID:19001417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"nicotinic acid riboside hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-ribosylnicotinate hydrolase activity","type":"exact"},{"name":"D-ribosylnicotinic acid hydrolase activity","type":"exact"},{"name":"nicotinate ribonucleoside hydrolase activity","type":"exact"},{"name":"nicotinate riboside hydrolase activity","type":"exact"},{"name":"nicotinic acid ribonucleoside hydrolase activity","type":"exact"}],"termid":"GO:0070636","terms_by_termid":{"GO:0070636":null}}


id: GO:0045754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of acetate catabolic process","termid":"GO:0045734"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"acetate catabolic process","termid":"GO:0045733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"positive regulation of acetate catabolic process","synonyms":[{"name":"activation of acetate catabolic process","type":"narrow"},{"name":"positive regulation of acetate breakdown","type":"exact"},{"name":"positive regulation of acetate catabolism","type":"exact"},{"name":"positive regulation of acetate degradation","type":"exact"},{"name":"stimulation of acetate catabolic process","type":"narrow"},{"name":"up regulation of acetate catabolic process","type":"exact"},{"name":"up-regulation of acetate catabolic process","type":"exact"},{"name":"upregulation of acetate catabolic process","type":"exact"}],"termid":"GO:0045754"}


id: _global:paralogous_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"homologous_to","termid":"_global:homologous_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralogous_to","termid":"_global:paralogous_to"}


id: GO:1904125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any convergent extension that is involved in rhombomere morphogenesis.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:24892953","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"},{"relation_name":"is_a","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"},{"relation_name":"part_of","term_name":"rhombomere morphogenesis","termid":"GO:0021593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in rhombomere morphogenesis","termid":"GO:1904125"}


id: PBO:0070772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 2","termid":"PBO:0070772"}


id: GO:0016828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid sulfur-sulfur bond.","definition_xrefs":["EC:3.12.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on acid sulfur-sulfur bonds","synonyms":[{"name":"hydrolase activity, acting on acid sulphur-sulphur bonds","type":"exact"}],"termid":"GO:0016828"}


id: MONDO:0002585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Breast fibrocystic change characterized by the presence of epithelial cell hyperplasia. Epithelial atypia may be present or absent.","definition_xrefs":["NCIT:C6940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast fibrocystic disease","termid":"MONDO:0005219"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast fibrocystic change, proliferative type","secondary_identifiers":["UMLS:C1332629","DOID:3274","MEDGEN:231967"],"synonyms":[{"name":"benign proliferative breast disease","type":"exact"},{"name":"breast fibrocystic change, proliferative type","type":"exact"},{"name":"fibrocystic change, proliferative type with atypia","type":"exact"},{"name":"fibrocystic disease, proliferative type with atypia","type":"exact"},{"name":"proliferating lesion of breast without atypia","type":"exact"},{"name":"proliferating lesion of the breast without atypia","type":"exact"},{"name":"proliferative breast disease","type":"exact"},{"name":"proliferative breast lesion","type":"exact"},{"name":"proliferative fibrocystic change","type":"broad"},{"name":"proliferative type fibrocystic change of breast","type":"exact"},{"name":"proliferative type fibrocystic change of the breast","type":"exact"}],"termid":"MONDO:0002585","xrefs":{"Monarch":{"xref_id":"0002585"}}}


id: MONDO:0044269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Human personality traits that can be reliably measured by rating scales show a considerable heritable component. One such instrument is the tridimensional personality questionnaire (TPQ), which was designed by {6:Cloninger et al. (1993)} to measure 4 distinct domains of temperament--novelty seeking, harm avoidance, reward dependence, and persistence--that are hypothesized to be based on distinct neurochemical and genetic substrates.nnRisk-taking is a characteristic of behaviors that occur under conditions of uncertainty and involves a tradeoff between beneficial versus detrimental outcomes, perceived or real. Risk-taking may or may not involve conscious evaluation of the probability and magnitude of possible outcomes ({1:Anokhin et al., 2009}).nnSee also harm avoidance (OMIM:607834) and pathologic gambling (OMIM:606349), which may be related.","definition_xrefs":["OMIM:601696"],"gene_count":0,"genotype_count":0,"name":"obsolete novelty seeking personality trait (obsolete MONDO:0044269)","synonyms":[{"name":"novelty seeking personality trait","type":"related"},{"name":"risk-taking behavior","type":"related"}],"termid":"MONDO:0044269","xrefs":{"Monarch":{"xref_id":"0044269"}}}


id: PBO:0086446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mannosidase; GPI-anchored membrane protein required for cell wall biosynthesis in bud formation;homologous to Dfg5p","termid":"PBO:0086446"}


id: GO:1990852
data:
  {"annotated_genes":["SJAG_05266","SJAG_01775","SJAG_01546","SJAG_03437","SJAG_05220","SJAG_00918","SJAG_01224","SJAG_05319","SJAG_01371","SJAG_02731","SJAG_01211"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113887,90775,100324,88930,108682,109686,89534,96571,98426,107301,116711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"The directed movement of a protein along a microtubule to the spindle pole body, mediated by motor proteins.","definition_xrefs":["PMID:25987607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to spindle pole body","termid":"GO:0071989"},{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_02731":null,"SJAG_03437":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"protein transport along microtubule to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990852","terms_by_termid":{"GO:1990976":null}}


id: PBO:0000599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD protein-1 Cph1","termid":"PBO:0000599"}


id: GO:1901872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ecgonone methyl ester.","definition_xrefs":["GOC:TermGenie","PMID:22665766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"ecgonone methyl ester metabolic process","termid":"GO:1901870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"ecgonone methyl ester biosynthetic process","synonyms":[{"name":"ecgonone methyl ester anabolism","type":"exact"},{"name":"ecgonone methyl ester biosynthesis","type":"exact"},{"name":"ecgonone methyl ester formation","type":"exact"},{"name":"ecgonone methyl ester synthesis","type":"exact"}],"termid":"GO:1901872"}


id: PBO:0001761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase (predicted)","termid":"PBO:0001761"}


id: MONDO:1011443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychiatric disorder, non-human animal","termid":"MONDO:1011351"},{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, non-human animal","secondary_identifiers":["OMIA:000033"],"termid":"MONDO:1011443","xrefs":{"Monarch":{"xref_id":"1011443"}}}


id: GO:0061400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to a calcium ion stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to calcium ion (obsolete GO:0061400)","termid":"GO:0061400"}


id: SO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An EST read from the 5' end of a transcript that usually codes for a protein. These regions tend to be conserved across species and do not change much within a gene family.","direct_ancestors":[{"relation_name":"is_a","term_name":"EST","termid":"SO:0000345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_EST","synonyms":[{"name":"5' EST","type":"exact"},{"name":"five prime EST","type":"exact"}],"termid":"SO:0001208"}


id: PBO:0034715
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage-hair hypoplasia","termid":"PBO:0034715"}


id: PBO:0057623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1193","termid":"PBO:0057623"}


id: MONDO:0019641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pauci-immune glomerulonephritis (GN) is one of the most frequent causes of rapidly progressive GN (RPGN). It is characterized clinically by renal manifestations of RPGN (hematuria, hypertension) leading to renal failure within days or weeks, and may be associated with manifestations of systemic vasculitis (arthralgia, fever, seizures, mono neuritis and lung involvement). Pauci-immune GN is histologically characterized by focal necrotizing and crescentic GN, with mild or absent glomerular staining for immunoglobulin and complement by fluorescence microscopy, which may manifest either as part of a systemic small vessel vasculitis (including microscopic polyangiitis, granulomatosis with polyangiitis and eosinophilic granulomatosis with polyangiitis), or rarely as part of renal-limited vasculitis (RLV, idiopathic crescentic GN). Immunologic classification is based on the presence or absence of circulating anti-neutrophil cytoplasmic antibodies (ANCAs), namely pauci-immune-GN with ANCA and pauci-immune GN without ANCA.","definition_xrefs":["Orphanet:93126"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Pauci-immune glomerulonephritis","secondary_identifiers":["GARD:19175","MEDGEN:575439","icd11.foundation:1359757645","UMLS:C0343196"],"termid":"MONDO:0019641","xrefs":{"Monarch":{"xref_id":"0019641"}}}


id: PBO:0048090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 11","termid":"PBO:0048090"}


id: GO:0050225
data:
  {"annotated_genes":["SJAG_03213"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105300],"is_not":false,"summary":null,"term":"GO:0050225"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pseudouridine = ADP + 2 H+ + pseudouridine 5'-phosphate.","definition_xrefs":["RHEA:22448","EC:2.7.1.83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"pseudouridine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PSEUDOURIDINE-KINASE-RXN","KEGG_REACTION:R03315"],"synonyms":[{"name":"ATP:pseudouridine 5'-phosphotransferase activity","type":"related"},{"name":"pseudouridine kinase (phosphorylating)","type":"related"}],"termid":"GO:0050225","terms_by_termid":{"GO:0050225":null}}


id: PBO:0027895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methyltransferase_activity_(H3-K4_specific)","termid":"PBO:0027895"}


id: GO:0010231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that maintains a seed in a dormant state.","definition_xrefs":["PMID:9580097","ISBN:9781405139830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seed dormancy process","termid":"GO:0010162"},{"relation_name":"is_a","term_name":"maintenance of dormancy","termid":"GO:0097437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of seed dormancy","termid":"GO:0010231"}


id: PBO:0028912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_abnormal_septum","termid":"PBO:0028912"}


id: PBO:0054948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2362","termid":"PBO:0054948"}


id: PBO:0005886
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein in cob intron","termid":"PBO:0005886"}


id: FYPO:0000840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level","synonyms":[{"name":"RNA accumulation: normal","type":"related"},{"name":"normal cellular RNA level","type":"exact"},{"name":"normal mRNA level","type":"narrow"},{"name":"normal transcript level","type":"exact"}],"termid":"FYPO:0000840"}


id: PBO:0055268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2695","termid":"PBO:0055268"}


id: PBO:0058762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6886","termid":"PBO:0058762"}


id: PBO:0061734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoredoxin like 1","termid":"PBO:0061734"}


id: PBO:0026890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_UV","termid":"PBO:0026890"}


id: PBO:0074484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 3","termid":"PBO:0074484"}


id: MONDO:0004701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign protruding lesion arising either from the endometrial cavity (endometrial polyp) or the endocervix (endocervical polyp). It may occasionally recur following complete resection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine polyp","secondary_identifiers":["DOID:9042","EFO:0009484","ICD10CM:N84.0","UMLS:C0156369","ICD9:621.0","MEDGEN:57628","NCIT:C3662","SCTID:11314008"],"synonyms":[{"name":"endometrial/uterine polyp","type":"exact"},{"name":"polyp of corpus uteri","type":"exact"},{"name":"polyp of endometrium","type":"narrow"},{"name":"polyp of the uterus","type":"exact"},{"name":"polyp of uterus","type":"exact"},{"name":"polyp, uterus","type":"exact"},{"name":"uterine polyp","type":"exact"},{"name":"uterus polyp","type":"exact"}],"termid":"MONDO:0004701","xrefs":{"Monarch":{"xref_id":"0004701"}}}


id: PBO:0085304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho85p cyclin of the Pho80p subfamily; forms the major Glc8p kinase together with Pcl7p and Pho85p; involved in the control of glycogen storage by Pho85p; stabilized by Elongin C binding; PCL6 has a paralog, PCL7, that arose from the whole genome duplication","termid":"PBO:0085304"}


id: PBO:0004407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Pmh1","termid":"PBO:0004407"}


id: GO:0008308
data:
  {"annotated_genes":["SJAG_00048"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71494],"is_not":false,"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:vw","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated monoatomic ion channel activity","termid":"GO:0005244"},{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated monoatomic anion channel activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0022844","Reactome:R-HSA-9012374"],"synonyms":[{"name":"voltage-dependent ion-selective channel activity","type":"related"},{"name":"voltage-gated anion channel activity","type":"broad"},{"name":"voltage-gated ion-selective channel activity","type":"related"}],"termid":"GO:0008308","terms_by_termid":{"GO:0008308":null}}


id: MONDO:0002705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast adenocarcinoma characterized by the presence of tall columnar neoplastic cells that contain intracytoplasmic mucin. Grossly, cystic changes are identified.","definition_xrefs":["NCIT:C40354"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"breast mucinous carcinoma","termid":"MONDO:0002707"},{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"mucinous cystadenocarcinoma","termid":"MONDO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast mucinous cystadenocarcinoma","secondary_identifiers":["DOID:3609","MEDGEN:267769","UMLS:C1511318"],"synonyms":[{"name":"breast mucinous cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0002705","xrefs":{"Monarch":{"xref_id":"0002705"}}}


id: GO:0006620
data:
  {"annotated_genes":["SJAG_00064","SJAG_00175","SJAG_01496","SJAG_02354","SJAG_00959","SJAG_02330","SJAG_03955","SJAG_02208","SJAG_02588","SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69693,79207,95527],"is_not":false,"summary":null,"term":"GO:0006620"},{"annotations":[73016,108105,80169,97131,72973,97848,73328],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"}]},"cv_name":"biological_process","definition":"The targeting of proteins to a membrane that occurs after their translation. Some secretory proteins exhibit posttranslational transport into the endoplasmic reticulum (ER) lumen: they are synthesized in their entirety on free cytosolic ribosomes and then released into the cytosol, where they are bound by chaperones which keep them in an unfolded state, and subsequently are translocated across the ER membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to membrane","termid":"GO:0006612"},{"relation_name":"is_a","term_name":"protein targeting to ER","termid":"GO:0045047"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00959":null,"SJAG_01496":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03396":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006605","GO:0051179"],"is_obsolete":false,"name":"post-translational protein targeting to endoplasmic reticulum membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SRP-independent endoplasmic reticulum protein-membrane targeting","type":"exact"},{"name":"posttranslational endoplasmic reticulum membrane targeting","type":"exact"},{"name":"posttranslational endoplasmic reticulum protein-membrane targeting","type":"exact"},{"name":"posttranslational protein endoplasmic reticulum membrane targeting","type":"exact"},{"name":"posttranslational protein targeting to ER membrane","type":"exact"},{"name":"posttranslational protein targeting to endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0006620","terms_by_termid":{"GO:0006620":null,"GO:0031204":null}}


id: FYPO:0008130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translational readthough of a stop codon increases during cytoplasmic translation.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoplasmic translation","termid":"FYPO:0003124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased stop codon readthrough","termid":"FYPO:0008130"}


id: PBO:0005084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartate-tRNA ligase (predicted)","termid":"PBO:0005084"}


id: FYPO:0006597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell wall organization RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Cell wall organization RNAs are transcribed from genes whose products are involved in assembly, alteration, or disassembly of the cell wall.","definition_xrefs":["PomBase:mah","PMID:29878109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased level of cell wall organization gene mRNA during vegetative growth","synonyms":[{"name":"increased cell wall organization gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of cell wall organization gene RNA during vegetative growth","type":"exact"},{"name":"increased level of cell wall organization gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of cell wall organization gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of cell wall remodeling gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0006597"}


id: FYPO:0001155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the changes that take place in growth medium, due to metabolism, secretion, etc. by a cell or population of cells, differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"altered effect on growth medium","synonyms":[{"name":"abnormal effect on growth medium","type":"exact"}],"termid":"FYPO:0001155"}


id: PBO:0073672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein beta 1","termid":"PBO:0073672"}


id: PBO:0053171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"left-right determination factor 2","termid":"PBO:0053171"}


id: MONDO:0018503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma of stomach, salivary gland type","secondary_identifiers":["Orphanet:423781"],"synonyms":[{"name":"gastric carcinoma, salivary gland type","type":"exact"}],"termid":"MONDO:0018503","xrefs":{"Monarch":{"xref_id":"0018503"}}}


id: PBO:0027296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tetranucleate_vegetative_cell","termid":"PBO:0027296"}


id: GO:0044774
data:
  {"annotated_genes":["SJAG_00640","SJAG_02771","SJAG_03529","SJAG_04287","SJAG_02074","SJAG_02563","SJAG_01010","SJAG_03720","SJAG_03695","SJAG_02026","SJAG_01429","SJAG_03026","SJAG_01873","SJAG_00327","SJAG_04140","SJAG_02266","SJAG_04332","SJAG_01677","SJAG_05373","SJAG_00486","SJAG_03898","SJAG_00429","SJAG_01708","SJAG_02576","SJAG_01076","SJAG_01084","SJAG_00623","SJAG_03927","SJAG_04671","SJAG_01044","SJAG_04280","SJAG_01605","SJAG_01146","SJAG_02098","SJAG_00364","SJAG_03160","SJAG_01855","SJAG_01205","SJAG_03048","SJAG_00169","SJAG_01680","SJAG_03942"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77796,110992,79819,114259,115798,116024,93364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[100340,99161,111827,109110,79225,74582,70879,115853,91225,116898,72022,98994,106417,78651,93758,116597,117071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[91102,109463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[72020,91226,100341,106418,99163,100851,75031,88908,116812,117508,109111,79088,111522,90002,91589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[88909,79093,90238,102155,111523,94334,88954,73676,99164,111828,115855,95803,78979,91227,74141,78650,106419,107462,100660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signaling process that controls cell cycle progression in response to changes in DNA structure by monitoring the integrity of the DNA during mitosis. The DNA integrity checkpoint begins with detection of DNA damage, defects in DNA structure or DNA replication, and ends with signal transduction.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"DNA integrity checkpoint signaling","termid":"GO:0031570"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03529":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"mitotic DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0070683","GO:1902403"],"synonyms":[{"name":"intracellular signal transduction involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"intracellular signal transduction involved in topo II checkpoint","type":"exact"},{"name":"intracellular signal transduction pathway involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signal transduction pathway involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"narrow"},{"name":"intracellular signal transduction pathway involved in topo II checkpoint","type":"narrow"},{"name":"intracellular signal transduction pathway involved in topoisomerase II checkpoint","type":"narrow"},{"name":"intracellular signaling cascade involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signaling cascade involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"intracellular signaling cascade involved in topo II checkpoint","type":"exact"},{"name":"intracellular signaling chain involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signaling chain involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"related"},{"name":"intracellular signaling pathway involved in topo II checkpoint","type":"narrow"},{"name":"intracellular signaling pathway involved in topoisomerase II checkpoint","type":"related"},{"name":"mitotic DNA integrity checkpoint","type":"exact"},{"name":"mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"signal transduction via intracellular signaling cascade involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in topo II checkpoint","type":"related"}],"termid":"GO:0044774","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0044773":null}}


id: PR:O13672
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L7a that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03104","PANTHER:PTHR23105:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.04","secondary_identifiers":["UniProtKB:O13672"],"synonyms":[{"name":"L4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"L7A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RPL7A","type":"exact"}],"termid":"PR:O13672"}


id: GO:0018864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetylene, formula CH2CH2, the simplest of the alkynes.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"alkyne metabolic process","termid":"GO:0043452"},{"relation_name":"is_a","term_name":"terminal acetylenic compound metabolic process","termid":"GO:0120244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:atl"],"synonyms":[{"name":"acetylene metabolism","type":"exact"},{"name":"ethyne metabolic process","type":"exact"},{"name":"ethyne metabolism","type":"exact"}],"termid":"GO:0018864"}


id: PBO:0080465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle trafficking 1 pseudogene 1","termid":"PBO:0080465"}


id: PBO:0072430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 4","termid":"PBO:0072430"}


id: MONDO:0014326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nemaline myopathy in which the cause of the disease is a mutation in the KLHL41 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital nemaline myopathy","termid":"MONDO:0015735"},{"relation_name":"is_a","term_name":"intermediate nemaline myopathy","termid":"MONDO:0015736"},{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"},{"relation_name":"is_a","term_name":"childhood-onset nemaline myopathy","termid":"MONDO:0015738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"nemaline myopathy 9","secondary_identifiers":["MEDGEN:816714","GARD:16007","DOID:0110929","OMIM:615731","UMLS:C3810384"],"synonyms":[{"name":"KLHL41 nemaline myopathy","type":"exact"},{"name":"NEM9","type":"exact"},{"name":"nemaline myopathy 9","type":"exact"},{"name":"nemaline myopathy caused by mutation in KLHL41","type":"exact"},{"name":"nemaline myopathy type 9","type":"exact"}],"termid":"MONDO:0014326","xrefs":{"Monarch":{"xref_id":"0014326"}}}


id: GO:0005206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete heparin sulfate proteoglycan (obsolete GO:0005206)","synonyms":[{"name":"heparin sulfate proteoglycan","type":"exact"},{"name":"heparin sulphate proteoglycan","type":"exact"}],"termid":"GO:0005206"}


id: PBO:0062001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily G member 6","termid":"PBO:0062001"}


id: _global:formed_as_result_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"output_of","termid":"_global:output_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formed_as_result_of","secondary_identifiers":["RO:0002354"],"termid":"_global:formed_as_result_of"}


id: GO:0015487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: melibiose(out) + monovalent cation(out) = melibiose(in) + monovalent cation(in).","definition_xrefs":["TC:2.A.2.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"melibiose transmembrane transporter activity","termid":"GO:0015156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"melibiose:monoatomic cation symporter activity","synonyms":[{"name":"melibiose permease activity","type":"related"},{"name":"melibiose:cation symporter activity","type":"broad"},{"name":"melibiose:monovalent cation symporter activity","type":"exact"}],"termid":"GO:0015487"}


id: PBO:0113026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; promotes nutrient responsive growth via the Ras-cAMP signaling pathway; phosphorylates and inhibits histone demethylase Jhd2p in response to glucose, promoting H3K4 trimethylation and maintaining H3K14 acetylation by preventing chromatin binding of Rpd3p; required for Sfl1p-mediated pseudohyphal growth; partially redundant with Tpk1p and Tpk3p; localizes to P-bodies during stationary phase; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0113026"}


id: GO:0009593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a chemical stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus","synonyms":[{"name":"chemoperception","type":"exact"},{"name":"chemoreception","type":"related"},{"name":"detection of chemical substance","type":"exact"},{"name":"perception of chemical stimulus","type":"related"},{"name":"perception of chemical substance","type":"related"}],"termid":"GO:0009593"}


id: PBO:0003005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIPSY domain","termid":"PBO:0003005"}


id: PBO:0051227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-20-1 (pseudogene)","termid":"PBO:0051227"}


id: MONDO:1011137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in dogs in which the cause of the disease is a mutation in the CCDC39 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia, dog","termid":"MONDO:1012138"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia CCDC39-related, dog","secondary_identifiers":["OMIA:001540-9615"],"termid":"MONDO:1011137","xrefs":{"Monarch":{"xref_id":"1011137"}}}


id: PBO:0042670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 4","termid":"PBO:0042670"}


id: GO:0110102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ribulose bisphosphate carboxylase complex.","definition_xrefs":["GOC:krc","PMID:29589905","GOC:tb","PMID:29396988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"ribulose bisphosphate carboxylase complex assembly","synonyms":[{"name":"RuBisCO assembly","type":"exact"}],"termid":"GO:0110102"}


id: GO:0030367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-17 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-17 receptor binding","synonyms":[{"name":"IL-17","type":"narrow"},{"name":"interleukin-17 receptor ligand","type":"narrow"}],"termid":"GO:0030367"}


id: GO:0018788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: atrazine + H2O = chloride + H+ + hydroxyatrazine.","definition_xrefs":["RHEA:11312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"atrazine chlorohydrolase activity","secondary_identifiers":["MetaCyc:3.8.1.8-RXN","UM-BBD_reactionID:r0113","EC:3.8.1.8","KEGG_REACTION:R05558"],"synonyms":[{"name":"AtzA","type":"related"}],"termid":"GO:0018788"}


id: GO:0036081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when extracellular ammonia (NH3) has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:19135896","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"extracellular ammonia-gated monoatomic ion channel activity","synonyms":[{"name":"extracellular ammonia-gated ion channel activity","type":"broad"},{"name":"ionotropic ammonia receptor activity","type":"related"}],"termid":"GO:0036081"}


id: GO:0019826
data:
  {"annotated_genes":["SJAG_06622","SJAG_03903","SJAG_00642","SJAG_02135","SJAG_03828","SJAG_06621","SJAG_02945","SJAG_00027"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108762,108763,108764,108765,108766,108767,108768,111509],"is_not":false,"summary":null,"term":"GO:0019826"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of oxygen (O2).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00642":null,"SJAG_02135":null,"SJAG_02945":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140299","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"oxygen sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019826","terms_by_termid":{"GO:0019826":null}}


id: PBO:0001368
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex binds 5'-CCAAT-3'","termid":"PBO:0001368"}


id: PBO:0113119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsin-like protein required for endocytosis and actin patch assembly; K48-, K63-specific Ub chain binding protein that functions as an endocytic adaptor; contains clathrin-binding motif at C-terminus; functionally redundant with Ent1p; ENT2 has a paralog, ENT1, that arose from the whole genome duplication","termid":"PBO:0113119"}


id: PBO:0086540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YCR001W is not an essential gene","termid":"PBO:0086540"}


id: MONDO:0003315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a endometrium.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial carcinoma","termid":"MONDO:0002447"},{"relation_name":"is_a","term_name":"uterus carcinoma in situ","termid":"MONDO:0004710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrium carcinoma in situ","secondary_identifiers":["ICD10CM:D07.0","UMLS:C0346191","SCTID:92582009","DOID:5172","MEDGEN:87545","ICD9:233.2"],"synonyms":[{"name":"carcinoma in situ of endometrium","type":"exact"},{"name":"endometrial carcinoma in situ","type":"exact"},{"name":"endometrium in situ carcinoma","type":"exact"},{"name":"stage 0 endometrium carcinoma","type":"exact"}],"termid":"MONDO:0003315","xrefs":{"Monarch":{"xref_id":"0003315"}}}


id: GO:0070607
data:
  {"annotated_genes":["SJAG_02278","SJAG_00610","SJAG_00424","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94732,102641,89227,92222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of (1->3)-alpha-glucan metabolic process","termid":"GO:0070605"},{"relation_name":"regulates","term_name":"cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070597"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell wall 1,3-alpha-glucan metabolic process","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"regulation of cell wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"regulation of cell wall alpha-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0070607","terms_by_termid":{"GO:0070610":null}}


id: GO:0044194
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory lysosome that is present in cells with cytolytic capability such as cytotoxic T lymphocytes and natural killer cells. Cytolytic granules mediate the storage and regulated excretion of lytic molecules for killing of target cells.","definition_xrefs":["PMID:11052265","PMID:12766758","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"cytolytic granule","termid":"GO:0044194"}


id: MONDO:0024529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial mitral valve prolapse","termid":"MONDO:0008004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"MVP1","secondary_identifiers":["OMIM:157700","GARD:3688","UMLS:C1834819","MEDGEN:320443"],"synonyms":[{"name":"MVP1","type":"exact"},{"name":"PMV","type":"related"},{"name":"barlow syndrome","type":"related"},{"name":"click-murmur syndrome","type":"related"},{"name":"floppy mitral valve","type":"related"},{"name":"mitral regurgitation, familial","type":"related"},{"name":"mitral valve prolapse 1","type":"related"},{"name":"mitral valve prolapse, familial","type":"related"},{"name":"mitral valve prolapse, familial, X-linked","type":"related"},{"name":"mitral valve prolapse, myxomatous 1","type":"related"},{"name":"myxomatous mitral valve prolapse 1","type":"related"},{"name":"myxomatous valvular disease, familial","type":"related"},{"name":"prolapsed mitral valve","type":"related"}],"termid":"MONDO:0024529","xrefs":{"Monarch":{"xref_id":"0024529"}}}


id: GO:0031388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing one or more phosphate groups into an organic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"organic acid phosphorylation","termid":"GO:0031388"}


id: GO:0004639
data:
  {"annotated_genes":["SJAG_02364"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76585],"is_not":false,"summary":null,"term":"GO:0004639"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + L-aspartate + ATP = (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.2.6","RHEA:22628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02364":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"phosphoribosylaminoimidazolesuccinocarboxamide synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:SAICARSYN-RXN","Reactome:R-HSA-73805","KEGG_REACTION:R04591"],"synonyms":[{"name":"4-((N-succinylamino)carbonyl)-5-aminoimidazole ribonucleotide synthetase activity","type":"related"},{"name":"4-(N-succinocarboxamide)-5-aminoimidazole synthetase activity","type":"related"},{"name":"4-[(N-succinylamino)carbonyl]-5-aminoimidazole ribonucleotide synthetase activity","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate:L-aspartate ligase (ADP-forming)","type":"related"},{"name":"5-aminoimidazole-4-N-succinocarboxamide ribonucleotide synthetase activity","type":"related"},{"name":"PurC","type":"related"},{"name":"SAICAR synthase activity","type":"related"},{"name":"SAICAR synthetase activity","type":"related"},{"name":"SAICARs activity","type":"related"},{"name":"phosphoribosylaminoimidazole-succinocarboxamide synthase activity","type":"related"},{"name":"phosphoribosylaminoimidazole-succinocarboxamide synthetase activity","type":"related"},{"name":"phosphoribosylaminoimidazolesuccinocarboxamide synthetase activity","type":"related"}],"termid":"GO:0004639","terms_by_termid":{"GO:0004639":null}}


id: FYPO:0007601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is decreased, and the protein is instead visible diffusely localized in the cytoplasm.","definition_xrefs":["PomBase:mah","PMID:33138913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitochondrion","termid":"FYPO:0007038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization","synonyms":[{"name":"decreased protein localisation to mitochondrion, with diffuse cytoplasmic protein mislocalisation","type":"exact"},{"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic localization","type":"exact"},{"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization","type":"exact"}],"termid":"FYPO:0007601"}


id: MONDO:0018822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Global developmental delay-visual anomalies-progressive cerebellar atrophy-truncal hypotonia syndrome is a rare, genetic, neurological disorder characterized by mild to severe developmental delay and speech impairment, truncal hypotonia, abnormalities of vision (including cortical visual impairment and abnormal visual-evoked potentials), progressive brain atrophy mainly affecting the cerebellum, and shortened or atrophic corpus callosum. Other clinical findings may include increased muscle tone in the extremities, dystonic posturing, hyporeflexia, scoliosis, postnatal microcephaly and variable facial dysmorphism (e.g. deep-set eyes, gingival hyperplasia, short philtrum and retrognathia).","definition_xrefs":["Orphanet:480898"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"global developmental delay-visual anomalies-progressive cerebellar atrophy-truncal hypotonia syndrome","secondary_identifiers":["GARD:17871","MEDGEN:1798945","UMLS:C5567522"],"termid":"MONDO:0018822","xrefs":{"Monarch":{"xref_id":"0018822"}}}


id: PBO:0026789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_heterothallic_h-_cells","termid":"PBO:0026789"}


id: GO:0098873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Propagation of an action potential in a neuron, from its site of initiation (typically the axon hillock) towards the soma.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential propagation","termid":"GO:0098870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal action potential back-propagation","termid":"GO:0098873"}


id: GO:0140497
data:
  {"annotated_genes":["SJAG_04095","SJAG_01276","SJAG_00816","SJAG_04770"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87292,97682,104750,117844],"is_not":false,"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"A complex with alpha-(1->6)-mannosyltransferase activity, located in the cis Golgi membrane; adds mannan to N-linked glycans on proteins as part of the elongation of alpha 1,6-linked Man backbone. In S. cerevisiae, contains Mnn9p, Anp1p, Mnn10p, Mnn11p, and Hoc1p.","definition_xrefs":["PMID:9430634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan polymerase complex","termid":"GO:0000136"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00816":null,"SJAG_01276":null,"SJAG_04095":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005794","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mannan polymerase II complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140497","terms_by_termid":{"GO:0140497":null}}


id: PBO:0047978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member E, pseudogene","termid":"PBO:0047978"}


id: MONDO:0015967
data:
  {"annotated_genes":["SJAG_02012","SJAG_03247","SJAG_04334","SJAG_04495","SJAG_00092"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87140,87141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014488"},{"annotations":[87064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[84941,84942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"},{"annotations":[86211,86212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"}]},"cv_name":"mondo","definition":"Diabetes mellitus that is caused by mutations in a single gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00092":null,"SJAG_02012":null,"SJAG_03247":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0005015","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"monogenic diabetes","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1392102","NCIT:C129739","EFO:1001511","Orphanet:183625","UMLS:C3888631"],"synonyms":[{"name":"monogenic diabetes","type":"exact"},{"name":"rare genetic diabetes mellitus","type":"exact"}],"termid":"MONDO:0015967","terms_by_termid":{"MONDO:0007453":null,"MONDO:0014488":null,"MONDO:0014674":null,"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0015967"}}}


id: PBO:0084109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heat shock protein of the Hsp70 family; localized in mitochondrial nucleoids, plays a role in protein translocation, interacts with Mge1p in an ATP-dependent manner; overexpression induces extensive mitochondrial DNA aggregations; ECM10 has a paralog, SSC1, that arose from the whole genome duplication","termid":"PBO:0084109"}


id: SO:0001395
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified methionine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_methionine","secondary_identifiers":["MOD:00913"],"synonyms":[{"name":"ModMet","type":"exact"},{"name":"modified L methionine","type":"exact"},{"name":"modified L-methionine","type":"exact"}],"termid":"SO:0001395"}


id: PBO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 27","termid":"PBO:0062043"}


id: MONDO:0003284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the mediastium. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign neoplasm of mediastinum","termid":"MONDO:0021521"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinum leiomyoma","secondary_identifiers":["MEDGEN:277350","NCIT:C6598","UMLS:C1334659","DOID:5123"],"synonyms":[{"name":"leiomyoma of mediastinum","type":"exact"},{"name":"leiomyoma of the mediastinum","type":"exact"},{"name":"mediastinal leiomyoma","type":"exact"},{"name":"mediastinum leiomyoma","type":"exact"}],"termid":"MONDO:0003284","xrefs":{"Monarch":{"xref_id":"0003284"}}}


id: GO:0160042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the active transport of purine nucleotides across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["PMID:18375752","PMID:27477609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transmembrane transporter activity","termid":"GO:0015216"},{"relation_name":"is_a","term_name":"membrane potential driven uniporter activity","termid":"GO:0022810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"purine nucleotide uniporter activity","termid":"GO:0160042"}


id: MONDO:0035452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare bone disease characterized by spontaneous adult-onset tarsal navicular osteonecrosis. Patients present with chronic mid- and hindfoot pain, swelling and tenderness over the dorsomedial aspect of the midfoot, flattening of the medial longitudinal arch, and pes planovarus. Radiographic findings include comma-shaped deformity due to collapse of the lateral part of the navicular bone and medial or dorsal protrusion of a portion or the entire bone. The condition may be bilateral or asymmetric and associated with pathological fractures.","definition_xrefs":["Orphanet:566943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mueller-weiss syndrome","secondary_identifiers":["GARD:22283","MEDGEN:1708314","UMLS:C4761149"],"synonyms":[{"name":"Brailsford disease","type":"exact"},{"name":"Mueller-Weiss osteonecrosis of the tarsal bone","type":"exact"}],"termid":"MONDO:0035452","xrefs":{"Monarch":{"xref_id":"0035452"}}}


id: PBO:0087575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the 19S regulatory particle of the 26S proteasome lid; synthetically lethal with RPT1, which is an ATPase component of the 19S regulatory particle; physically interacts with Nob1p and Rpn3p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087575"}


id: GO:2000689
data:
  {"annotated_genes":["SJAG_00938","SJAG_04621","SJAG_04498","SJAG_02864"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97827,107928,89115,98087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"},{"annotations":[77232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903479"}]},"cv_name":"biological_process","definition":"An actin filament organization process that contributes to actomyosin contractile ring assembly during cytokinesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04498":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0044085","GO:0008150","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"actomyosin contractile ring assembly actin filament organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin filament organisation of constriction ring assembly","type":"related"},{"name":"actin filament organisation of contractile ring assembly","type":"exact"},{"name":"actin filament organisation of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organisation of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"actin filament organisation of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"actin filament organisation of cytokinesis, actomyosin ring formation","type":"related"},{"name":"actin filament organisation of cytokinesis, contractile ring assembly","type":"related"},{"name":"actin filament organization involved in cytokinetic actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organization of constriction ring assembly","type":"related"},{"name":"actin filament organization of contractile ring assembly","type":"exact"},{"name":"actin filament organization of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"actin filament organization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"actin filament organization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"actin filament organization of cytokinesis, contractile ring assembly","type":"related"},{"name":"regulation of actin filament localization of constriction ring assembly","type":"related"},{"name":"regulation of actin filament localization of contractile ring assembly","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin contractile ring assembly","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, contractile ring assembly","type":"related"}],"termid":"GO:2000689","terms_by_termid":{"GO:0071520":null,"GO:1903479":null}}


id: GO:0070051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to fibrinogen, a highly soluble hexameric glycoprotein complex that is found in blood plasma and is converted to fibrin by thrombin in the coagulation cascade.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"fibrinogen binding","termid":"GO:0070051"}


id: GO:1903626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:2001740","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of DNA catabolic process","termid":"GO:1903624"},{"relation_name":"positively_regulates","term_name":"DNA catabolic process","termid":"GO:0006308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA catabolic process","synonyms":[{"name":"activation of DNA breakdown","type":"narrow"},{"name":"activation of DNA catabolic process","type":"narrow"},{"name":"activation of DNA catabolism","type":"narrow"},{"name":"activation of DNA degradation","type":"narrow"},{"name":"positive regulation of DNA breakdown","type":"exact"},{"name":"positive regulation of DNA catabolism","type":"exact"},{"name":"positive regulation of DNA degradation","type":"exact"},{"name":"up regulation of DNA breakdown","type":"exact"},{"name":"up regulation of DNA catabolic process","type":"exact"},{"name":"up regulation of DNA catabolism","type":"exact"},{"name":"up regulation of DNA degradation","type":"exact"},{"name":"up-regulation of DNA breakdown","type":"exact"},{"name":"up-regulation of DNA catabolic process","type":"exact"},{"name":"up-regulation of DNA catabolism","type":"exact"},{"name":"up-regulation of DNA degradation","type":"exact"},{"name":"upregulation of DNA breakdown","type":"exact"},{"name":"upregulation of DNA catabolic process","type":"exact"},{"name":"upregulation of DNA catabolism","type":"exact"},{"name":"upregulation of DNA degradation","type":"exact"}],"termid":"GO:1903626"}


id: PBO:0069154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 406, pseudogene","termid":"PBO:0069154"}


id: GO:0021503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis of the neural fold elevations that results in the movement of the tips of the elevations towards each other in order to fuse.","definition_xrefs":["GOC:dgh","GOC:jid","PMID:15806586","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"neural fold formation","termid":"GO:0001842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold bending","termid":"GO:0021503"}


id: PBO:0072301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 19","termid":"PBO:0072301"}


id: GO:0052840
data:
  {"annotated_genes":["SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75955],"is_not":false,"summary":null,"term":"GO:0052840"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol tetrakisphosphate + H2O = 1D-myo-inositol pentakisphosphate + phosphate.","definition_xrefs":["PMID:10827188","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol diphosphate tetrakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1855166","MetaCyc:RXN-10963"],"termid":"GO:0052840","terms_by_termid":{"GO:0052840":null}}


id: PR:O14265
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase subunit H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10698:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit H (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.10","secondary_identifiers":["UniProtKB:O14265"],"synonyms":[{"name":"SPAC7D4.10","type":"related"},{"name":"Spom972h-ATP6V1H","type":"exact"},{"name":"V-ATPase 54 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"V-ATPase subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14265"}


id: GO:0004723
data:
  {"annotated_genes":["SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033192"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: protein serine phosphate + H2O = protein serine + phosphate; and protein threonine phosphate + H2O = protein threonine + phosphate. These reactions require the presence of calcium ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0140096","GO:0004721","GO:0003824"],"is_obsolete":false,"name":"calcium-dependent protein serine/threonine phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-2025882","GO:0008596"],"synonyms":[{"name":"calcineurin","type":"narrow"},{"name":"calcium-dependent protein serine/threonine phosphatase, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0004723","terms_by_termid":{"GO:0033192":null}}


id: FYPO:0001038
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119319],"is_not":false,"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"},{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null,"SJAG_04551":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"increased protein phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001038","terms_by_termid":{"FYPO:0001038":null}}


id: MONDO:0013606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Hermansky-Pudlak syndrome in which the cause of the disease is a mutation in the BLOC1S6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"},{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome","termid":"MONDO:0019312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005046","MONDO:0005570","MONDO:0005093"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome 9","secondary_identifiers":["Orphanet:280663","UMLS:C3280026","GARD:18338","OMIM:614171","MEDGEN:481656","DOID:0060547","ICD10CM:E70.3"],"synonyms":[{"name":"BLOC1S6 Hermansky-Pudlak syndrome","type":"exact"},{"name":"HPS9","type":"exact"},{"name":"Hermansky-Pudlak syndrome 9","type":"exact"},{"name":"Hermansky-Pudlak syndrome caused by mutation in BLOC1S6","type":"exact"},{"name":"Hermansky-Pudlak syndrome type 9","type":"exact"}],"termid":"MONDO:0013606","xrefs":{"Monarch":{"xref_id":"0013606"}}}


id: FYPO:0000103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to copper ions. Cells stop growing (and may die) at a concentration of copper ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to copper","synonyms":[{"name":"hypersensitive to copper","type":"exact"},{"name":"sensitive to copper during mitotic cell cycle","type":"related"},{"name":"sensitive to copper during vegetative growth","type":"exact"},{"name":"sensitive to copper ions","type":"exact"}],"termid":"FYPO:0000103"}


id: PBO:0082879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin; structural protein of SCF complexes (which also contain Skp1p, Cdc34p, Hrt1p and an F-box protein) involved in ubiquitination; SCF promotes the G1-S transition by targeting G1 cyclins and the Cln-CDK inhibitor Sic1p for degradation; human homolog CUL1 can complement yeast cdc53 null mutant","termid":"PBO:0082879"}


id: PBO:0079708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 2","termid":"PBO:0079708"}


id: PBO:0090757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide synthetase Dph6","termid":"PBO:0090757"}


id: PBO:0071900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 38","termid":"PBO:0071900"}


id: GO:0035798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: n-alkanal + NADP+ = alk-2-enal + NADPH + H+.","definition_xrefs":["PMID:16299173","RHEA:13737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-alkenal reductase [NAD(P)+] activity","termid":"GO:0032440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-alkenal reductase (NADPH) activity","secondary_identifiers":["EC:1.3.1.102"],"synonyms":[{"name":"NADPH:2-alkenal alpha,beta-hydrogenase activity","type":"exact"}],"termid":"GO:0035798"}


id: GO:0055096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of low-density lipoprotein particle.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:16013438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle mediated signaling","termid":"GO:0055095"},{"relation_name":"part_of","term_name":"cellular response to low-density lipoprotein particle stimulus","termid":"GO:0071404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"low-density lipoprotein particle mediated signaling","synonyms":[{"name":"low-density lipoprotein mediated signalling","type":"exact"},{"name":"low-density lipoprotein particle mediated signal transduction","type":"exact"},{"name":"low-density lipoprotein particle-mediated signaling","type":"exact"}],"termid":"GO:0055096"}


id: PBO:0060195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 16, cell surface associated","termid":"PBO:0060195"}


id: PBO:0076197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 6","termid":"PBO:0076197"}


id: PBO:0001427
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bowen Conradi syndrome","termid":"PBO:0001427"}


id: MONDO:0043004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A jauncice caused by severe leptospirosis.","definition_xrefs":["Wikipedia:Leptospirosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leptospirosis","termid":"MONDO:0005825"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weil's disease","secondary_identifiers":["UMLS:C0043102","MESH:D014895","MEDGEN:21912","SCTID:398067003"],"synonyms":[{"name":"Icterohemorrhagic leptospirosis","type":"related"},{"name":"Weil disease","type":"related"},{"name":"Weil's disease","type":"exact"},{"name":"Weils disease","type":"related"},{"name":"disease, Weil","type":"related"},{"name":"disease, Weil's","type":"related"},{"name":"icteric leptospirosis","type":"related"},{"name":"jaundice, spirochetal","type":"related"},{"name":"leptospirosis, icterohemorrhagic","type":"related"},{"name":"spirochetal jaundice","type":"related"}],"termid":"MONDO:0043004","xrefs":{"Monarch":{"xref_id":"0043004"}}}


id: GO:0060696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of phospholipid catabolism, the chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"phospholipid catabolic process","termid":"GO:0009395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phospholipid catabolic process","termid":"GO:0060696"}


id: PBO:0071804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reprimo like","termid":"PBO:0071804"}


id: FYECO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Nitrogen was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000062 absence of nitrogen (obsolete FYECO:0000062)","termid":"FYECO:0000062"}


id: PBO:0066605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member T2","termid":"PBO:0066605"}


id: GO:0051173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nitrogen or nitrogenous compounds.","definition_xrefs":["GOC:ai","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nitrogen compound metabolic process (obsolete GO:0051173)","synonyms":[{"name":"positive regulation of nitrogen metabolic process","type":"exact"}],"termid":"GO:0051173"}


id: SO:0000499
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A continuous piece of sequence similar to the 'virtual contig' concept of the Ensembl database.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"virtual_sequence","synonyms":[{"name":"virtual sequence","type":"exact"}],"termid":"SO:0000499"}


id: MONDO:0008097
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85683],"is_not":false,"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"Linear nevus sebaceous syndrome (LNSS) is characterized by the association of a large sebaceous nevus, usually appearing on the face or on the scalp, with a broad spectrum of abnormalities that may affect every organ system, including the central nervous system (brain neoplasms, hemimegalencephaly and lateral ventricle enlargement).","definition_xrefs":["Orphanet:2612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"palpebral nevus","termid":"MONDO:0020179"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"linear nevus sebaceous syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111530","NCIT:C4678","NORD:1692","OMIM:163200","UMLS:C4552097","GARD:10291","MEDGEN:1646345"],"synonyms":[{"name":"Epidermal Nevus syndrome, formerly","type":"related"},{"name":"JNP","type":"related"},{"name":"Jadassohn Nevus phakomatosis","type":"related"},{"name":"Jadassohn nevus phakomatosis","type":"related"},{"name":"Nevus Sebaceus Syndrome","type":"exact"},{"name":"Nevus sebaceous of Jadassohn","type":"exact"},{"name":"Nevus sebaceus of Jadassohn","type":"exact"},{"name":"Nevus sebaceus syndrome","type":"exact"},{"name":"SCHIMMELPENNING-FEUERSTEIN-MIMS syndrome","type":"related"},{"name":"SFM","type":"related"},{"name":"SFM syndrome","type":"related"},{"name":"Schimmelpenning Feuerstein Mims syndrome","type":"related"},{"name":"Schimmelpenning syndrome","type":"exact"},{"name":"Schimmelpenning-Feuerstein-Mims syndrome, somatic mosaic","type":"exact"},{"name":"Sfm syndrome","type":"related"},{"name":"Solomon syndrome","type":"exact"},{"name":"epidermal nevus syndrome","type":"related"},{"name":"linear sebaceous Nevus","type":"exact"},{"name":"linear sebaceous Nevus syndrome","type":"related"},{"name":"organoid Nevus","type":"exact"},{"name":"organoid Nevus phakomatosis","type":"related"},{"name":"organoid nevus phakomatosis","type":"related"},{"name":"organoid nevus syndrome","type":"exact"},{"name":"sebaceous Nevus syndrome, linear","type":"related"},{"name":"sebaceous nevus syndrome linear","type":"related"}],"termid":"MONDO:0008097","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0008097"}}}


id: PBO:0069205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 460, pseudogene","termid":"PBO:0069205"}


id: PBO:0061000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHP2 ribonucleoprotein","termid":"PBO:0061000"}


id: MONDO:0015677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital cardiac diverticulum (CCD) is a very rare congenital malformation characterized by a muscular appendix emerging from the left ventricular apex, rarely from the right ventricle or from both chambers, with clinical manifestations ranging from asymptomatic to life-threatening hemodynamic collapse.","definition_xrefs":["Orphanet:1686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac diverticulum","secondary_identifiers":["UMLS:C0546315","HP:0100571","GARD:1094","NANDO:2200234","MEDGEN:903640"],"synonyms":[{"name":"Cardiac diverticulum","type":"exact"},{"name":"cardiac diverticulum (disease)","type":"exact"}],"termid":"MONDO:0015677","xrefs":{"Monarch":{"xref_id":"0015677"}}}


id: GO:0030087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex (obsolete GO:0030087)","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex","type":"exact"}],"termid":"GO:0030087"}


id: GO:0140710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a Frizzled Nuclear Import pathway.","definition_xrefs":["PMID:22579286","PMID:22510459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of non-canonical Wnt signaling pathway","termid":"GO:2000050"},{"relation_name":"regulates","term_name":"Frizzled Nuclear Import pathway","termid":"GO:0140709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Frizzled Nuclear Import pathway","synonyms":[{"name":"regulation of FNI","type":"broad"},{"name":"regulation of Frizzled Nuclear Import Wnt Pathway","type":"exact"}],"termid":"GO:0140710"}


id: PBO:0040810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD cargo adaptor 1 pseudogene 1","termid":"PBO:0040810"}


id: SO:0001272
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A noncoding RNA that binds to a specific amino acid to allow that amino acid to be used by the ribosome during translation of RNA.","direct_ancestors":[{"relation_name":"has_quality","term_name":"tRNA_encoding","termid":"SO:0000663"},{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_gene","synonyms":[{"name":"tRNA gene","type":"exact"}],"termid":"SO:0001272"}


id: PBO:0056281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 2C member 1","termid":"PBO:0056281"}


id: PR:Q9UTF6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase subunit 5A, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01180","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.04","secondary_identifiers":["UniProtKB:Q9UTF6"],"synonyms":[{"name":"Spom972h-COX5A","type":"exact"},{"name":"cytochrome c oxidase polypeptide VI (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTF6"}


id: MOD:00921
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"New uncategorized Unimod. OBSOLETE because organizational use is no longer required.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00921 new uncategorized Unimod entries (obsolete MOD:00921)","termid":"MOD:00921"}


id: GO:0042539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotonic response","termid":"GO:0006971"},{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypotonic salinity response","synonyms":[{"name":"response to hypotonic salt stress","type":"exact"}],"termid":"GO:0042539"}


id: SO:0002167
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"IsomiRs are all the bona fide variants of a mature product. IsomiRs should be connected to the ref_miRNA it is most likely to be the variant of. Some isomiRs can be variations of one or multiple ref_miRNA.","definition_xrefs":["PMID:26453491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA","termid":"SO:0000276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isomiR","termid":"SO:0002167"}


id: PBO:0066959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 261","termid":"PBO:0066959"}


id: PBO:0016586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transthyretin/hydroxyisourate hydrolase (predicted)","termid":"PBO:0016586"}


id: PBO:0048836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein nucleolar 3","termid":"PBO:0048836"}


id: GO:0009697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of salicylic acid (2-hydroxybenzoic acid), a derivative of benzoic acid.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salicylic acid metabolic process","termid":"GO:0009696"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"salicylic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-981"],"synonyms":[{"name":"salicylate biosynthetic process","type":"exact"},{"name":"salicylic acid anabolism","type":"exact"},{"name":"salicylic acid biosynthesis","type":"exact"},{"name":"salicylic acid formation","type":"exact"},{"name":"salicylic acid synthesis","type":"exact"}],"termid":"GO:0009697"}


id: PBO:0057450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 570","termid":"PBO:0057450"}


id: FYPO:0001035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is thicker than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall thickness during vegetative growth","termid":"FYPO:0006745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cell wall thickness during vegetative growth","synonyms":[{"name":"increased cell wall thickness during mitotic cell cycle","type":"related"},{"name":"thickened cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0001035"}


id: FYPO:0006763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the meiotic cell cycle DNA replication checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. The meiotic DNA replication checkpoint normally prevents the initiation of meiotic nuclear division until pre-meiotic DNA replication is complete.","definition_xrefs":["PMID:10521402","GO:0033315","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"meiotic cell cycle checkpoint phenotype","termid":"FYPO:0005511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished meiotic cell cycle DNA replication checkpoint","synonyms":[{"name":"abolished meiotic DNA replication checkpoint","type":"exact"},{"name":"abolished meiotic G2/MI DNA replication checkpoint","type":"exact"}],"termid":"FYPO:0006763"}


id: GO:0030380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-17E receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-17E receptor binding","synonyms":[{"name":"IL-17E","type":"narrow"},{"name":"interleukin-17E receptor ligand","type":"narrow"}],"termid":"GO:0030380"}


id: PBO:0054327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1720","termid":"PBO:0054327"}


id: FYPO:0008188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in the centromere central core is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H3-K9 trimethylation at centromere central core during vegetative growth","termid":"FYPO:0008188"}


id: PATO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of having sharp straight-edged teeth pointing to the apex.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serration","termid":"PATO:0001976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serrated","synonyms":[{"name":"serrate","type":"exact"}],"termid":"PATO:0001206"}


id: GO:0043760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-L-2,6-diaminoheptanedioate + 2-oxoglutarate = N-acetyl-2-L-amino-6-oxoheptanedioate + L-glutamate.","definition_xrefs":["PMID:1906065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"acetyldiaminopimelate aminotransferase activity","synonyms":[{"name":"N-acetyl-L,L-diaminopimelate aminotransferase activity","type":"exact"},{"name":"N-acetyl-diaminopimelate aminotransferase activity","type":"exact"}],"termid":"GO:0043760"}


id: PBO:0067022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 35, pseudogene","termid":"PBO:0067022"}


id: PBO:0079833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UMODL1 antisense RNA 1","termid":"PBO:0079833"}


id: PBO:0030555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_lysine_import","termid":"PBO:0030555"}


id: FYPO:0001888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"substance absent from cell","termid":"FYPO:0001888"}


id: PBO:0028954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_in_proteasome","termid":"PBO:0028954"}


id: PBO:0073780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 2","termid":"PBO:0073780"}


id: MONDO:0018064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trigonocephaly-broad thumbs syndrome is characterized by neonatal trigonocephaly and multiple anomalies including craniosynostosis, shallow orbits, unusual nose, deviation of the terminal phalanges of fingers 1, 2, and 5, and broad toes with duplication of the terminal phalanx. It has been described in a mother and her son. It is transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:3365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"trigonocephaly-broad thumbs syndrome","secondary_identifiers":["SCTID:719949001","UMLS:C4304968","GARD:2756","MEDGEN:930637"],"synonyms":[{"name":"Hunter Rudd Hoffmann syndrome","type":"related"},{"name":"Hunter-Rudd-Hoffmann syndrome","type":"exact"}],"termid":"MONDO:0018064","xrefs":{"Monarch":{"xref_id":"0018064"}}}


id: MONDO:1011129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Delayed or abolished puberty in male pigs due to a variation in the KISS1 gene.","definition_xrefs":["PMID:36685939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadism, non-human animal","termid":"MONDO:1010276"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism, KISS1-related, pig","secondary_identifiers":["OMIA:002619-9823"],"termid":"MONDO:1011129","xrefs":{"Monarch":{"xref_id":"1011129"}}}


id: PR:O43047
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GrpE protein homolog 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GrpE protein homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.19","secondary_identifiers":["UniProtKB:O43047"],"synonyms":[{"name":"Spom972h-GRPEL1","type":"exact"}],"termid":"PR:O43047"}


id: PBO:0016065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related endocytic adaptor Any2 (predicted)","termid":"PBO:0016065"}


id: PR:Q9UTN4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfs2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTN4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylation factor subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.14c","synonyms":[{"name":"Spom972h-pfs2","type":"exact"}],"termid":"PR:Q9UTN4"}


id: GO:0070519
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to membrane protein CD63, a member of the tetraspan family.","definition_xrefs":["PMID:8757325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha4-beta1 integrin-CD63 complex","synonyms":[{"name":"ITGA4-ITGB1-CD63 complex","type":"narrow"}],"termid":"GO:0070519"}


id: GO:0061662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a ISG15 to a substrate protein via the reaction X-ISG15 + S = X + S-ISG15, where X is either an E2 or E3 enzyme, the X-ISG15 linkage is a thioester bond, and the S-ISG15 linkage is an isopeptide bond between the C-terminal amino acid of ISG15 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISG15 transferase activity","termid":"GO:0042296"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0003824","GO:0016746","GO:0019787"],"is_obsolete":false,"name":"ISG15 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061662"}


id: PBO:0087261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase of the the RAM signaling network; Ndr/LATS family member; binds regulatory subunit Mob2p; involved in regulation of cellular morphogenesis, polarized growth, and septum destruction; phosphorylation by Cbk1p regulates localization and activity of Ace2p transcription factor and Ssd1p translational repressor; Cbk1p activity is regulated by both phosphorylation and specific localization; relocalizes to cytoplasm upon DNA replication stress","termid":"PBO:0087261"}


id: PBO:0051715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin induced gene 2","termid":"PBO:0051715"}


id: PBO:0074237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 49 member 4","termid":"PBO:0074237"}


id: PBO:0049458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1 pseudogene 3","termid":"PBO:0049458"}


id: GO:0060624
data:
  {"annotated_genes":["SJAG_04771","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87308,92216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of ascospore wall (1->3)-beta-D-glucan biosynthetic process, the chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D--glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ascospore wall beta-glucan biosynthetic process","termid":"GO:0060622"},{"relation_name":"is_a","term_name":"regulation of cell wall (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0090334"},{"relation_name":"regulates","term_name":"ascospore wall (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0034413"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"regulation of ascospore wall (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ascospore wall 1,3-beta-D-glucan biosynthetic process","type":"broad"},{"name":"regulation of ascospore wall 1,3-beta-glucan biosynthetic process","type":"broad"}],"termid":"GO:0060624","terms_by_termid":{"GO:0140748":null}}


id: GO:0070022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A homodimeric receptor complex that consists of two TGF-beta receptor monomers.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor complex (obsolete GO:0070022)","synonyms":[{"name":"TGF-beta receptor complex","type":"broad"},{"name":"transforming growth factor beta receptor complex","type":"exact"}],"termid":"GO:0070022"}


id: GO:0047247
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: luteolin 7-O-[(beta-D-glucosiduronate)-(1->2)-(beta-D-glucosiduronate)] + UDP-alpha-D-glucuronate = H+ + luteolin 7-O-[(beta-D-glucosiduronate)-(1->2)-(beta-D-glucosiduronate)] 4'-O-beta-D-glucosiduronate + UDP.","definition_xrefs":["EC:2.4.1.191","RHEA:22116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"luteolin-7-O-diglucuronide 4'-O-glucuronosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06828","MetaCyc:2.4.1.191-RXN"],"synonyms":[{"name":"LDT","type":"related"},{"name":"UDP-glucuronate:luteolin 7-O-diglucuronide-glucuronosyltransferase activity","type":"related"},{"name":"UDP-glucuronate:luteolin-7-O-beta-D-diglucuronide 4'-O-glucuronosyltransferase activity","type":"related"},{"name":"UDPglucuronate:luteolin 7-O-diglucuronide-4'-O-glucuronosyl-transferase activity","type":"related"},{"name":"UDPglucuronate:luteolin-7-O-beta-D-diglucuronide 4'-O-glucuronosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucuronate-luteolin 7-O-diglucuronide glucuronosyltransferase activity","type":"related"}],"termid":"GO:0047247"}


id: PBO:0079788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A9","termid":"PBO:0079788"}


id: PBO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 3","termid":"PBO:0046064"}


id: GO:0141192
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96805],"is_not":false,"summary":null,"term":"GO:0141192"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP + H+ = diphosphate + P(1),P(4)-bis(5'-adenosyl)tetraphosphate.","definition_xrefs":["PMID:27398309","PMID:16884494","PMID:19710017","RHEA:34935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ATP:ATP adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9825790"],"synonyms":[{"name":"adenine triphosphate adenylyltransferase activity","type":"related"}],"termid":"GO:0141192","terms_by_termid":{"GO:0141192":null}}


id: MONDO:0010298
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85965],"is_not":false,"summary":null,"term":"MONDO:0010298"}]},"cv_name":"mondo","definition":"Lesch-Nyhan syndrome (LNS) is the most severe form of hypoxanthine-guanine phosphoribosyltransferase (HPRT) deficiency, a hereditary disorder of purine metabolism, and is associated with uric acid overproduction (UAO), neurological troubles, and behavioral problems.","definition_xrefs":["Orphanet:510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hypoxanthine-guanine phosphoribosyltransferase deficiency","termid":"MONDO:0016088"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066"],"is_obsolete":false,"name":"Lesch-Nyhan syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:7226","MedDRA:10057589","MEDGEN:9721","MESH:D007926","NANDO:2200586","OMIM:300322","ICD10CM:E79.1","NCIT:C61255","SCTID:10406007","icd11.foundation:1886495906","ICD9:277.2","NORD:1365","UMLS:C0023374","DOID:1919"],"synonyms":[{"name":"HG-PRT deficiency","type":"exact"},{"name":"HPRT complete deficiency","type":"exact"},{"name":"HPRT deficiency","type":"related"},{"name":"HPRT deficiency grade IV","type":"exact"},{"name":"HPRT deficiency, complete","type":"related"},{"name":"HPRT deficiency, neurologic variant","type":"related"},{"name":"Hprt1 deficiency","type":"related"},{"name":"LNS","type":"related"},{"name":"Lesch - Nyhan syndrome","type":"exact"},{"name":"Lesch Nyhan Syndrome","type":"exact"},{"name":"Lesch Nyhan disease","type":"related"},{"name":"Lesch Nyhan syndrome","type":"related"},{"name":"Lesch-Nyhan syndrome","type":"exact"},{"name":"Lesch-Nyhan syndrome, X-linked recessive","type":"exact"},{"name":"Lesch-Nyhan syndrome, neurologic variant","type":"related"},{"name":"X-linked hyperuricemia","type":"exact"},{"name":"X-linked hyperuricemia (disorder) [ambiguous]","type":"exact"},{"name":"complete hypoxanthine-guanine phosphoribosyltransferase deficiency","type":"exact"},{"name":"deficiency of IMP pyrophosphorylase","type":"exact"},{"name":"hypoxanthine guanine phospho-ribosyltransferase 1 deficiency","type":"related"},{"name":"hypoxanthine guanine phosphoribosyltransferase 1 deficiency","type":"related"},{"name":"hypoxanthine guanine phosphoribosyltransferase complete deficiency","type":"exact"},{"name":"hypoxanthine guanine phosphoribosyltransferase deficiency, grade IV","type":"exact"},{"name":"hypoxanthine-guanine-phosphoribosyltransferase deficiency (& [Lesch - Nyhan syndrome])","type":"related"}],"termid":"MONDO:0010298","terms_by_termid":{"MONDO:0010298":null},"xrefs":{"Monarch":{"xref_id":"0010298"}}}


id: PBO:0030090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_dipeptide_nitrogen_source","termid":"PBO:0030090"}


id: PBO:0038419
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_throughput_type","termid":"PBO:0038419"}


id: PBO:0079411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 5","termid":"PBO:0079411"}


id: GO:0016483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Increases the activity of the enzyme tryptophase hydroxylase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"tryptophan hydroxylase activator activity","termid":"GO:0016483"}


id: PBO:0075152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 8","termid":"PBO:0075152"}


id: PBO:0117138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA guanosine 2 -O-methyltransferase TARBP1","termid":"PBO:0117138"}


id: GO:0060683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of salivary gland branching as a result of the transfer of information from the epithelial cells to the mesenchymal cells of the salivary gland.","definition_xrefs":["PMID:18559345","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-mesenchymal cell signaling","termid":"GO:0060684"},{"relation_name":"is_a","term_name":"regulation of branching involved in salivary gland morphogenesis","termid":"GO:0060693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling","synonyms":[{"name":"regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signalling","type":"exact"}],"termid":"GO:0060683"}


id: PBO:0049580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.4 histone, cluster member","termid":"PBO:0049580"}


id: GO:1903968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a micafungin stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:16928959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to micafungin","termid":"GO:1903967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to micafungin","termid":"GO:1903968"}


id: GO:0033137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the phosphorylation of peptidyl-serine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of peptidyl-serine phosphorylation","termid":"GO:0033135"},{"relation_name":"negatively_regulates","term_name":"peptidyl-serine phosphorylation","termid":"GO:0018105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-serine phosphorylation","termid":"GO:0033137"}


id: PBO:0003033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase (predicted)","termid":"PBO:0003033"}


id: PBO:0079825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-51 like kinase 4","termid":"PBO:0079825"}


id: PBO:0046253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 2","termid":"PBO:0046253"}


id: FYPO:0001320
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L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-3","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G 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phenotype during vegetative growth","type":"exact"},{"name":"fission yeast vegetative cell phenotype","type":"exact"},{"name":"vegetative cell phenotype during mitotic cell cycle","type":"related"},{"name":"vegetative cell phenotype during vegetative growth","type":"exact"}],"termid":"FYPO:0001320","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000026":null,"FYPO:0000118":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000356":null,"FYPO:0000595":null,"FYPO:0000596":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000644":null,"FYPO:0000648":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0000731":null,"FYPO:0000815":null,"FYPO:0001007":null,"FYPO:0001038":null,"FYPO:0001122":null,"FYPO:0001132":null,"FYPO:0001327":null,"FYPO:0001369":null,"FYPO:0001489":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0001838":null,"FYPO:0001877":null,"FYPO:0001971":null,"FYPO:0002026":null,"FYPO:0002033":null,"FYPO:0002227":null,"FYPO:0002380":null,"FYPO:0002870":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003751":null,"FYPO:0003779":null,"FYPO:0003780":null,"FYPO:0003946":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0004105":null,"FYPO:0004165":null,"FYPO:0004205":null,"FYPO:0004295":null,"FYPO:0004318":null,"FYPO:0004573":null,"FYPO:0004683":null,"FYPO:0004695":null,"FYPO:0004890":null,"FYPO:0004982":null,"FYPO:0005503":null,"FYPO:0005957":null,"FYPO:0006433":null,"FYPO:0006557":null,"FYPO:0006616":null,"FYPO:0006989":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007701":null,"FYPO:0007770":null,"FYPO:0007771":null,"FYPO:0007772":null,"FYPO:0007783":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:1904984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of quinolinate biosynthetic process.","definition_xrefs":["PMID:19843166","GOC:bf","GO_REF:0000058","GOC:TermGenie","GOC:PARL","PMID:12140278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"quinolinate biosynthetic process","termid":"GO:0019805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of quinolinate biosynthetic process","synonyms":[{"name":"regulation of quinolinate anabolism","type":"exact"},{"name":"regulation of quinolinate biosynthesis","type":"exact"},{"name":"regulation of quinolinate formation","type":"exact"},{"name":"regulation of quinolinate synthesis","type":"exact"}],"termid":"GO:1904984"}


id: GO:0034520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-naphthaldehyde + NAD+ + H2O = 2-naphthoate + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r0772"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-naphthaldehyde dehydrogenase activity (obsolete GO:0034520)","termid":"GO:0034520"}


id: GO:1904300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcytosis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:9664076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of transcytosis","termid":"GO:1904298"},{"relation_name":"positively_regulates","term_name":"transcytosis","termid":"GO:0045056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transcytosis","synonyms":[{"name":"activation of transcytosis","type":"narrow"},{"name":"up regulation of transcytosis","type":"exact"},{"name":"up-regulation of transcytosis","type":"exact"},{"name":"upregulation of transcytosis","type":"exact"}],"termid":"GO:1904300"}


id: GO:0014739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle hyperplasia.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hyperplasia","termid":"GO:0014738"},{"relation_name":"is_a","term_name":"positive regulation of muscle adaptation","termid":"GO:0014744"},{"relation_name":"positively_regulates","term_name":"muscle hyperplasia","termid":"GO:0014900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle hyperplasia","termid":"GO:0014739"}


id: PBO:0082383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 3 subunit of the 20S proteasome; involved in ubiquitin-dependent catabolism; human homolog is subunit C10","termid":"PBO:0082383"}


id: GO:0050812
data:
  {"annotated_genes":["SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acyl-CoA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01402":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"regulation of acyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of acyl-CoA anabolism","type":"exact"},{"name":"regulation of acyl-CoA biosynthesis","type":"exact"},{"name":"regulation of acyl-CoA formation","type":"exact"},{"name":"regulation of acyl-CoA synthesis","type":"exact"}],"termid":"GO:0050812","terms_by_termid":{"GO:0010510":null}}


id: PBO:0036515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get4 (predicted)","termid":"PBO:0036515"}


id: MONDO:0010719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation sensitivity of natural killer activity","secondary_identifiers":["OMIM:312210","UMLS:C1839408","MESH:C564066","MEDGEN:333311"],"synonyms":[{"name":"X-Ray Nk sensitivity","type":"related"},{"name":"radiation sensitivity of natural killer activity","type":"exact"}],"termid":"MONDO:0010719","xrefs":{"Monarch":{"xref_id":"0010719"}}}


id: PBO:0045330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK7 divergent transcript","termid":"PBO:0045330"}


id: PBO:0087356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor required for the first step of pre-mRNA splicing; binding to the spliceosome requires Prp2p and Yju2p; heat-stable protein; has similarity to S. pombe Cwf25p","termid":"PBO:0087356"}


id: PBO:0069961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1255, pseudogene","termid":"PBO:0069961"}


id: PBO:0064460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha 1, catalytic subunit","termid":"PBO:0064460"}


id: PBO:0042519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2","termid":"PBO:0042519"}


id: PATO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001109 absolute amplitude value (obsolete PATO:0001109)","termid":"PATO:0001109"}


id: GO:1990202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of FMN reductase activity. Reduces FMN to FMNH2 in a NAD(P)H-dependent manner. In E.coli, consists of a SsuE dimer.","definition_xrefs":["PMID:10480865","GOC:bhm","PMID:16997955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"FMN reductase complex","synonyms":[{"name":"FMN oxidoreductase complex, NAD(P)H-dependent","type":"related"},{"name":"FMN reductase complex, NAD(P)H-dependent","type":"exact"},{"name":"SsuE complex","type":"narrow"},{"name":"flavin oxidoreductase complex, NAD(P)H-dependent","type":"broad"}],"termid":"GO:1990202"}


id: GO:0019741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentacyclic triterpenoid compounds, terpenoids with six isoprene units and 5 carbon rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid catabolic process","termid":"GO:0016105"},{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pentacyclic triterpenoid catabolic process","synonyms":[{"name":"pentacyclic triterpenoid breakdown","type":"exact"},{"name":"pentacyclic triterpenoid catabolism","type":"exact"},{"name":"pentacyclic triterpenoid degradation","type":"exact"}],"termid":"GO:0019741"}


id: MONDO:0019880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 5q is a rare chromosomal anomaly syndrome, resulting from a partial duplication of the long arm of chromosome 5, characterized by short stature, moderate intellectual disability, and craniofacial dysmorphism (microcephaly, flat facies, large, low-set dysplastic ears, down-slanted, almond-shaped palpebral fissures, hypertelorism, epicanthal folds, small nose, long philtrum, small mouth with thin upper lip, and micrognathia). Patients also frequently present speech and cognitive delay, cardiac (ventriculomegaly, ventricular septum defect) and skeletal abnormalities (craniosynostosis, radial agenesis, ulnar hypoplasia, brachydactyly) and genital malformations (hypospadias, cryptorchidism).","definition_xrefs":["Orphanet:96097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy of the long arm of chromosome 5","termid":"MONDO:0016956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 5q","secondary_identifiers":["GARD:19313","MEDGEN:1646186","SCTID:763274002","UMLS:C4706363"],"synonyms":[{"name":"distal duplication 5q","type":"exact"},{"name":"distal trisomy type 5q","type":"exact"},{"name":"telomeric duplication 5q","type":"exact"},{"name":"trisomy 5qter","type":"exact"}],"termid":"MONDO:0019880","xrefs":{"Monarch":{"xref_id":"0019880"}}}


id: MONDO:1012828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy that occurs in rabbits due to a mutation in the ANO5 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, ANO5-related, rabbit","secondary_identifiers":["OMIA:002242-9986"],"termid":"MONDO:1012828","xrefs":{"Monarch":{"xref_id":"1012828"}}}


id: PBO:0061090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK3 homeobox 1","termid":"PBO:0061090"}


id: GO:0052569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of nitric oxide produced as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to defense-related symbiont nitric oxide production (obsolete GO:0052569)","synonyms":[{"name":"response to defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052569"}


id: PBO:0031244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_by_small_RNA","termid":"PBO:0031244"}


id: GO:0001793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an immunoglobulin of the IgM isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0781735149","GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor activity","termid":"GO:0019763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"IgM receptor activity","termid":"GO:0001793"}


id: PBO:0001824
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.87","termid":"PBO:0001824"}


id: PR:O43120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uap2 gene.","definition_xrefs":["UniProtKB:O43120","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor U2AF-associated protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.02c","synonyms":[{"name":"Spom972h-uap2","type":"exact"},{"name":"cold sensitive U2 snRNA suppressor 2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43120"}


id: GO:0030496
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"midbody","secondary_identifiers":["Wikipedia:Midbody_(cell_biology)"],"termid":"GO:0030496"}


id: MONDO:0007683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Grant syndrome is a rare osteogenesis imperfecta-like disorder, described in two patients to date, characterized clinically by persistent wormian bones, blue sclera, mandibular hypoplasia, shallow glenoid fossa, and campomelia. There have been no further descriptions in the literature since 1986.","definition_xrefs":["Orphanet:2097"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Grant syndrome","secondary_identifiers":["GARD:2559","OMIM:138930","icd11.foundation:1320218486","MEDGEN:333925","SCTID:723827003","UMLS:C1841835","MESH:C537293"],"synonyms":[{"name":"Grant syndrome","type":"exact"},{"name":"persistent wormian bones, blue sclerae, mandibular hypoplasia, shallow glenoid fossae and campomelia","type":"related"}],"termid":"MONDO:0007683","xrefs":{"Monarch":{"xref_id":"0007683"}}}


id: PBO:0042605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 5","termid":"PBO:0042605"}


id: GO:2000768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"},{"relation_name":"positively_regulates","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nephron tubule epithelial cell differentiation","termid":"GO:2000768"}


id: PBO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex beta subunit Cct2","termid":"PBO:0000506"}


id: GO:0098623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: SeO3(2-) + 3 NADPH + 5H+ = H2Se +  3NADP+ + 3H2O.","definition_xrefs":["PMID:1321713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"selenite reductase (NADPH) activity","secondary_identifiers":["Reactome:R-HSA-2408558"],"synonyms":[{"name":"selenite reductase activity","type":"exact"}],"termid":"GO:0098623"}


id: GO:0033689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of osteoblast proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of osteoblast proliferation","termid":"GO:0033688"},{"relation_name":"negatively_regulates","term_name":"osteoblast proliferation","termid":"GO:0033687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of osteoblast proliferation","synonyms":[{"name":"down regulation of osteoblast proliferation","type":"exact"},{"name":"down-regulation of osteoblast proliferation","type":"exact"},{"name":"downregulation of osteoblast proliferation","type":"exact"},{"name":"inhibition of osteoblast proliferation","type":"narrow"}],"termid":"GO:0033689"}


id: GO:0072265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric capsule are generated and organized. The metanephric capsule is the tough fibrous layer surrounding the metanephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule morphogenesis","termid":"GO:0072128"},{"relation_name":"part_of","term_name":"metanephric capsule development","termid":"GO:0072213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric capsule morphogenesis","termid":"GO:0072265"}


id: PBO:0001136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7-like Rlp7 involved in ribosome biogenesis (predicted)","termid":"PBO:0001136"}


id: FYPO:0009069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ciclopirox olamine. Cells stop growing (and may die) at a concentration of ciclopirox olamine that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to ciclopirox olamine","synonyms":[{"name":"hypersensitive to ciclopirox olamine","type":"exact"},{"name":"sensitive to ciclopirox olamine during mitotic cell cycle","type":"related"},{"name":"sensitive to ciclopirox olamine during vegetative growth","type":"exact"}],"termid":"FYPO:0009069"}


id: PBO:0088338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase","termid":"PBO:0088338"}


id: GO:0018952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving parathion, a highly toxic organophosphate compound formerly used as a broad spectrum insecticide, acaricide, fumigant and nematocide. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"parathion metabolic process","synonyms":[{"name":"parathion metabolism","type":"exact"}],"termid":"GO:0018952"}


id: PBO:0068013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 318","termid":"PBO:0068013"}


id: PBO:0063869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class B","termid":"PBO:0063869"}


id: GO:0003984
data:
  {"annotated_genes":["SJAG_03985"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75909],"is_not":false,"summary":null,"term":"GO:0003984"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 2 pyruvate = (2S)-2-acetolactate + CO2. Can also convert 2-oxobutanoate and pyruvate to (S)-2-ethyl-2-hydroxy-3-oxobutanoate.","definition_xrefs":["EC:2.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016744"],"is_obsolete":false,"name":"acetolactate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ACETOLACTSYN-RXN"],"synonyms":[{"name":"acetohydroxy acid synthetase activity","type":"related"},{"name":"acetohydroxyacid synthase activity","type":"related"},{"name":"acetolactate pyruvate-lyase (carboxylating) activity","type":"related"},{"name":"acetolactic synthetase activity","type":"related"},{"name":"alpha-acetohydroxy acid synthetase activity","type":"related"},{"name":"alpha-acetohydroxyacid synthase activity","type":"related"},{"name":"alpha-acetolactate synthase activity","type":"related"},{"name":"alpha-acetolactate synthetase activity","type":"related"},{"name":"pyruvate:pyruvate acetaldehydetransferase (decarboxylating)","type":"related"}],"termid":"GO:0003984","terms_by_termid":{"GO:0003984":null}}


id: GO:0086086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an AV node cardiac muscle cell contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in AV node cell action potential repolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in AV node cardiac muscle cell action potential repolarization","type":"exact"},{"name":"voltage-gated potassium channel activity involved in atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086086"}


id: PBO:0079773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose ceramide glucosyltransferase","termid":"PBO:0079773"}


id: PBO:0028633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mRNA_splicing,_via_spliceosome","termid":"PBO:0028633"}


id: FYPO:0005698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules from the equatorial microtubule organizing center does not occur.","definition_xrefs":["PomBase:mah","PMID:19001497"],"direct_ancestors":[{"relation_name":"has_output","term_name":"cytoplasmic microtubules nucleated from eMTOC absent from cell","termid":"FYPO:0004619"},{"relation_name":"is_a","term_name":"abolished cytoplasmic microtubule nucleation","termid":"FYPO:0005693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished microtubule nucleation from eMTOC","synonyms":[{"name":"abolished cytoplasmic microtubule nucleation from eMTOC","type":"exact"},{"name":"abolished microtubule nucleation from eMTOC during mitotic cell cycle","type":"exact"},{"name":"abolished microtubule nucleation from eMTOC during vegetative growth","type":"exact"},{"name":"abolished microtubule nucleation from equatorial microtubule organizing center","type":"exact"},{"name":"abolished microtubule nucleation from equatorial microtubule organizing centre","type":"exact"},{"name":"microtubule nucleation from eMTOC abolished","type":"exact"}],"termid":"FYPO:0005698"}


id: GO:0106343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction glutarate + 2-oxoglutarate + O2 = (S)-2-hydroxyglutarate + succinate + CO2.","definition_xrefs":["RHEA:13821","PMID:30498244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glutarate dioxygenase activity","secondary_identifiers":["EC:1.14.11.64"],"termid":"GO:0106343"}


id: PBO:0087370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spt4p/5p (DSIF) transcription elongation factor complex subunit; the Spt4/5 complex binds to ssRNA in a sequence-specific manner, and along with RNAP I and II has multiple roles regulating transcriptional elongation, RNA processing, quality control, and transcription-coupled repair; localizes to kinetochores and heterochromatin, influencing chromosomal dynamics and silencing; required for transcription through long trinucleotide repeats in ORFs and non-protein coding regions","termid":"PBO:0087370"}


id: GO:2000923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of arabinoxylan-containing compound catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000921"},{"relation_name":"is_a","term_name":"positive regulation of xylan catabolic process","termid":"GO:2001002"},{"relation_name":"positively_regulates","term_name":"arabinoxylan-containing compound catabolic process","termid":"GO:2000888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of arabinoxylan-containing compound catabolic process","synonyms":[{"name":"positive regulation of arabinoxylan catabolism","type":"exact"}],"termid":"GO:2000923"}


id: GO:0030999
data:
  {"annotated_genes":["SJAG_04457","SJAG_00727","SJAG_02104","SJAG_03048","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89380,116856],"is_not":false,"summary":null,"term":"GO:0030999"},{"annotations":[109980,93682],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090006"},{"annotations":[102187],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"The cell cycle process in which linear elements are assembled in association with fission yeast chromosomes during meiotic prophase. Linear element assembly begins with LinE complex formation and ends when LinE complexes are associated with chromatin in structures visible as nuclear foci. A linear element is a proteinaceous scaffold related to the synaptonemal complex.","definition_xrefs":["GOC:mah","PMID:30640914","GOC:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"homologous chromosome pairing at meiosis","termid":"GO:0007129"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_02104":null,"SJAG_03048":null,"SJAG_03698":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"linear element assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"linear element formation","type":"related"}],"termid":"GO:0030999","terms_by_termid":{"GO:0030999":null,"GO:0062123":null,"GO:0090006":null}}


id: GO:1902664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptidyl-L-cysteine S-palmitoylation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23444136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidyl-L-cysteine S-palmitoylation","termid":"GO:1902662"},{"relation_name":"is_a","term_name":"positive regulation of protein lipidation","termid":"GO:1903061"},{"relation_name":"positively_regulates","term_name":"peptidyl-L-cysteine S-palmitoylation","termid":"GO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-L-cysteine S-palmitoylation","synonyms":[{"name":"activation of peptidyl-L-cysteine S-palmitoylation","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-cysteine S-palmitoylation","type":"narrow"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"up regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"up-regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"upregulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-cysteine S-palmitoylation","type":"exact"}],"termid":"GO:1902664"}


id: PBO:0051437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-21","termid":"PBO:0051437"}


id: RO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x anabranch_of y if x is a distributary of y (i.e. it channels a from a larger flow from y) and x ultimately channels the flow back into y.","direct_ancestors":[{"relation_name":"is_a","term_name":"distributary_of","termid":"RO:0002377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anabranch_of","termid":"RO:0002378"}


id: GO:1903863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a P granule.","definition_xrefs":["GO_REF:0000079","GOC:kmv","GOC:TermGenie","PMID:25535836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P granule organization","termid":"GO:0030719"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"P granule assembly","synonyms":[{"name":"P granule formation","type":"exact"},{"name":"germline granule assembly","type":"exact"},{"name":"germline granule formation","type":"exact"},{"name":"polar granule assembly","type":"exact"},{"name":"polar granule formation","type":"exact"}],"termid":"GO:1903863"}


id: MONDO:0008551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A short-rib dysplasia characterized by thoracic dystrophy, laryngeal stenosis and a small pelvis.","definition_xrefs":["Orphanet:3317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thoracolaryngopelvic dysplasia","secondary_identifiers":["OMIM:187760","OMIM:187770","SCTID:723556008","icd11.foundation:337990406","UMLS:C1861197","MESH:C536517","GARD:5184","MEDGEN:349978"],"synonyms":[{"name":"Barnes syndrome","type":"exact"},{"name":"TLPD","type":"related"},{"name":"autosomal dominant thoracolaryngopelvic dysplasia","type":"related"},{"name":"thoracolaryngopelvic dysplasia","type":"exact"},{"name":"thoracopelvic dysostosis","type":"exact"}],"termid":"MONDO:0008551","xrefs":{"Monarch":{"xref_id":"0008551"}}}


id: GO:1905438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any non-canonical Wnt signaling pathway that is involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:TermGenie","GOC:bc","GO_REF:0000060","PMID:25640183","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete non-canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation (obsolete GO:1905438)","synonyms":[{"name":"beta-catenin-independent Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"beta-catenin-independent Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"beta-catenin-independent Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"beta-catenin-independent Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"beta-catenin-independent Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"non-canonical Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"non-canonical Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"non-canonical Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"non-canonical Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1905438"}


id: PR:O14091
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sut1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general alpha-glucoside permease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.08","synonyms":[{"name":"Spom972h-sut1","type":"exact"}],"termid":"PR:O14091"}


id: MONDO:0013190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital factor XIII deficiency","termid":"MONDO:0018029"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor XIII, b subunit, deficiency of","secondary_identifiers":["MESH:C567688","MEDGEN:442490","OMIM:613235","UMLS:C2750481","GARD:15635"],"synonyms":[{"name":"factor XIII, b subunit, deficiency of","type":"exact"},{"name":"factor XIIIB deficiency","type":"exact"}],"termid":"MONDO:0013190","xrefs":{"Monarch":{"xref_id":"0013190"}}}


id: PBO:0048323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 34","termid":"PBO:0048323"}


id: PBO:0002197
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.45","termid":"PBO:0002197"}


id: PBO:0017597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Ssz1 (predicted)","termid":"PBO:0017597"}


id: PBO:0060801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 7","termid":"PBO:0060801"}


id: PBO:0069267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 523, pseudogene","termid":"PBO:0069267"}


id: MONDO:0014644
data:
  {"annotated_genes":["SJAG_02306"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84914],"is_not":false,"summary":null,"term":"MONDO:0014644"}]},"cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 74 is a rare, genetic, spastic paraplegia-optic atrophy-neuropathy-related (SPOAN-like) disorder characterized by childhood onset of mild to moderate spastic paraparesis which manifests with gait impairment that very slowly progresses into late adulthood, hyperactive patellar reflex and bilateral extensor plantar response, in association with optic atrophy and typical symptoms of peripheral neuropathy, including reduced or absent ankle reflexes, lower limb atrophy and distal sensory impairment. Reduced visual acuity and pes cavus are frequently reported.","definition_xrefs":["Orphanet:468661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02306":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 74","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616451","MEDGEN:1800260","GARD:17842","DOID:0110819","UMLS:C5568837"],"synonyms":[{"name":"IBA57 hereditary spastic paraplegia","type":"exact"},{"name":"SPG74","type":"exact"},{"name":"autosomal recessive spastic paraplegia 74","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 74","type":"related"},{"name":"hereditary spastic paraplegia caused by mutation in IBA57","type":"exact"},{"name":"hereditary spastic paraplegia type 74","type":"exact"},{"name":"spastic paraplegia 74, autosomal recessive","type":"related"}],"termid":"MONDO:0014644","terms_by_termid":{"MONDO:0014644":null},"xrefs":{"Monarch":{"xref_id":"0014644"}}}


id: PBO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B beta subunit (predicted)","termid":"PBO:0001109"}


id: PBO:0045165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal intermediate chain 7","termid":"PBO:0045165"}


id: GO:0099646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of a neurotransmitter receptor vesicle from the plasma membrane to the endosome.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to endosome","termid":"GO:0036010"},{"relation_name":"is_a","term_name":"plasma membrane to endosome transport","termid":"GO:0048227"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"},{"relation_name":"is_a","term_name":"neurotransmitter receptor transport","termid":"GO:0099637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter receptor transport, plasma membrane to endosome","termid":"GO:0099646"}


id: GO:0046509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-sn-glycerol + UDP-D-galactose = 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol + H+ + UDP.","definition_xrefs":["RHEA:14945","EC:2.4.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"1,2-diacylglycerol 3-beta-galactosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02691","MetaCyc:2.4.1.46-RXN"],"synonyms":[{"name":"1-beta-MGDG activity","type":"related"},{"name":"1beta-MGDG","type":"related"},{"name":"MGDG synthase activity","type":"exact"},{"name":"UDP galactose-1,2-diacylglycerol galactosyltransferase activity","type":"exact"},{"name":"UDP-galactose-diacylglyceride galactosyltransferase activity","type":"exact"},{"name":"UDP-galactose:1,2-diacyl-sn-glycerol 3-beta-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:diacylglycerol galactosyltransferase activity","type":"exact"},{"name":"UDPgalactose:1,2-diacylglycerol 3-beta-D-galactosyltransferase activity","type":"related"},{"name":"monogalactosyldiacylglycerol synthase activity","type":"exact"},{"name":"uridine diphosphogalactose-1,2-diacylglycerol galactosyltransferase activity","type":"exact"}],"termid":"GO:0046509"}


id: RO:HOM0000012
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that involves sets of syntenic blocks.","definition_xrefs":["DOI:10.1002/1097-010X(20001215)288:4<345::AID-JEZ7>3.0.CO;2-Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_syntenic_homology_relationship_with","termid":"RO:HOM0000010"},{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_syntenic_paralogy_relationship_with","synonyms":[{"name":"duplicon","type":"related"},{"name":"paralogon","type":"related"},{"name":"syntenic paralogous to","type":"exact"}],"termid":"RO:HOM0000012"}


id: GO:0047017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + prostaglandin F2alpha = H+ + NADPH + prostaglandin D2.","definition_xrefs":["RHEA:10140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"prostaglandin F synthase activity","secondary_identifiers":["EC:1.1.1.188","MetaCyc:1.1.1.188-RXN"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha,15-trihydroxyprosta-5,13-dienoate:NADP+ 11-oxidoreductase activity","type":"related"},{"name":"NADPH-dependent prostaglandin D2 11-keto reductase activity","type":"related"},{"name":"PGD(2) 11-ketoreductase activity","type":"related"},{"name":"PGD2 11-ketoreductase activity","type":"related"},{"name":"PGF synthetase activity","type":"related"},{"name":"PGF2alpha synthetase activity","type":"related"},{"name":"prostaglandin 11-keto reductase activity","type":"related"},{"name":"prostaglandin 11-ketoreductase activity","type":"related"},{"name":"prostaglandin D2-ketoreductase activity","type":"related"},{"name":"prostaglandin F synthetase activity","type":"related"},{"name":"prostaglandin-D(2) 11-ketoreductase activity","type":"related"},{"name":"prostaglandin-D(2) 11-reductase activity","type":"related"},{"name":"prostaglandin-D(2) ketoreductase activity","type":"related"},{"name":"prostaglandin-D2 11-ketoreductase activity","type":"related"},{"name":"prostaglandin-D2 11-reductase activity","type":"related"},{"name":"prostaglandin-D2 ketoreductase activity","type":"related"},{"name":"prostaglandin-F synthase activity","type":"related"},{"name":"prostaglandin-F synthetase activity","type":"related"},{"name":"reductase, 15-hydroxy-11-oxoprostaglandin","type":"related"},{"name":"synthetase, prostaglandin F2alpha","type":"related"}],"termid":"GO:0047017"}


id: PBO:0058327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4700","termid":"PBO:0058327"}


id: PBO:0044377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 1 subfamily A member 1","termid":"PBO:0044377"}


id: MONDO:0032827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 16","secondary_identifiers":["UMLS:C5231421","MEDGEN:1684869","OMIM:618596"],"synonyms":[{"name":"EIG16","type":"exact"}],"termid":"MONDO:0032827","xrefs":{"Monarch":{"xref_id":"0032827"}}}


id: PBO:0061148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide nucleotide adenylyltransferase 1","termid":"PBO:0061148"}


id: PR:000027541
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor ste11 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:11702950","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor ste11","termid":"PR:000027538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor ste11 unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC32C12.02","synonyms":[{"name":"Spom-ste11/UnMod","type":"exact"}],"termid":"PR:000027541"}


id: PBO:0044546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein 3","termid":"PBO:0044546"}


id: CHEBI:49976
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc dichloride","termid":"CHEBI:49976"}


id: MOD:01276
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-tyrosine residue.","definition_xrefs":["PubMed:10906242","PubMed:8597590","Unimod:276#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-[4-(2-aminoethyl)benzenesulfonyl]tyrosine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01276"}


id: MONDO:0019247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete combined hyperlipidemia (including acquired and inherited) (obsolete MONDO:0019247)","termid":"MONDO:0019247","xrefs":{"Monarch":{"xref_id":"0019247"}}}


id: PBO:0030188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_hydroxyurea","termid":"PBO:0030188"}


id: MONDO:0001977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that involves the ureter.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"ureter cancer","termid":"MONDO:0008627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"ureteral lymphoma","secondary_identifiers":["DOID:14489","UMLS:C1336876","NCIT:C6175","MEDGEN:234458"],"synonyms":[{"name":"lymphoma of the ureter","type":"exact"},{"name":"lymphoma of ureter","type":"exact"},{"name":"primary ureter lymphoma","type":"exact"},{"name":"ureter lymphoma","type":"exact"},{"name":"ureteral lymphoma","type":"exact"}],"termid":"MONDO:0001977","xrefs":{"Monarch":{"xref_id":"0001977"}}}


id: GO:0022850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when serotonin has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:12867984","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"},{"relation_name":"is_a","term_name":"serotonin receptor activity","termid":"GO:0099589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"serotonin-gated monoatomic cation channel activity","secondary_identifiers":["GO:0005232","Reactome:R-HSA-9648983","Reactome:R-HSA-975311"],"synonyms":[{"name":"5-hydroxytryptamine-gated receptor-channel","type":"narrow"},{"name":"serotonin-activated cation-selective channel activity","type":"exact"},{"name":"serotonin-gated cation channel activity","type":"narrow"},{"name":"serotonin-gated cation-selective channel activity","type":"broad"},{"name":"serotonin-gated monoatomic cation-selective channel activity","type":"exact"}],"termid":"GO:0022850"}


id: PBO:0086346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P subunit of the mitochondrial glycine decarboxylase complex; glycine decarboxylase is required for the catabolism of glycine to 5,10-methylene-THF; expression is regulated by levels of 5,10-methylene-THF in the cytoplasm","termid":"PBO:0086346"}


id: GO:0015313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + fluconazole(in) = H+(in) + fluconazole(out).","definition_xrefs":["TC:2.A.1.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluconazole transmembrane transporter activity","termid":"GO:0015244"},{"relation_name":"is_a","term_name":"azole:proton antiporter activity","termid":"GO:0045119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"fluconazole:proton antiporter activity","synonyms":[{"name":"fluconazole:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015313"}


id: GO:0035525
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer of NF-kappa B p50 and p65 subunits.","definition_xrefs":["PMID:9299584","PMID:20393192","GO:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NF-kappaB complex","termid":"GO:0071159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NF-kappaB p50/p65 complex","synonyms":[{"name":"NF-kappa B1/RelA complex","type":"exact"},{"name":"NF-kappa B1/p65 complex","type":"exact"},{"name":"NF-kappa p105/RelA complex","type":"related"},{"name":"NF-kappa p105/p65 complex","type":"related"},{"name":"NF-kappa p50/RelA complex","type":"exact"}],"termid":"GO:0035525"}


id: PBO:0056805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD2 lysolipid transporter B, sphingolipid","termid":"PBO:0056805"}


id: PBO:0058933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS18 kinetochore protein A","termid":"PBO:0058933"}


id: GO:1901592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair via break-induced replication.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair via break-induced replication","termid":"GO:1901591"},{"relation_name":"is_a","term_name":"negative regulation of double-strand break repair via homologous recombination","termid":"GO:2000042"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair via break-induced replication","termid":"GO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"negative regulation of double-strand break repair via break-induced replication","synonyms":[{"name":"down regulation of double-strand break repair via break-induced replication","type":"exact"},{"name":"down-regulation of double-strand break repair via break-induced replication","type":"exact"},{"name":"downregulation of double-strand break repair via break-induced replication","type":"exact"},{"name":"inhibition of double-strand break repair via break-induced replication","type":"narrow"}],"termid":"GO:1901592"}


id: MONDO:0016836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"16p13.11 microdeletion syndrome is a recently described syndrome characterized by developmental delay, microcephaly, epilepsy, short stature, facial dysmorphism and behavioral problems.","definition_xrefs":["Orphanet:261236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 16","termid":"MONDO:0016894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16p13.11 microdeletion syndrome","secondary_identifiers":["SCTID:719577000","UMLS:C4304596","GARD:20774","DECIPHER:79","MEDGEN:930265"],"synonyms":[{"name":"16p13.11 recurrent microdeletion (neurocognitive disorder susceptibility locus)","type":"exact"},{"name":"Del(16)(p13.11)","type":"exact"},{"name":"monosomy 16p13.11","type":"exact"}],"termid":"MONDO:0016836","xrefs":{"Monarch":{"xref_id":"0016836"}}}


id: GO:0006730
data:
  {"annotated_genes":["SJAG_00106","SJAG_01126","SJAG_01616","SJAG_03914","SJAG_03712","SJAG_01766","SJAG_04156","SJAG_01466","SJAG_03224","SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104550,113294],"is_not":false,"summary":null,"term":"GO:0006730"},{"annotations":[76355,61089,70586,75640,104587,71649,72327,59459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the transfer of one-carbon units in various oxidation states.","definition_xrefs":["GOC:mah","GOC:pde","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01126":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_01766":null,"SJAG_03224":null,"SJAG_03712":null,"SJAG_03914":null,"SJAG_04156":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"one-carbon metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0019754","UM-BBD_pathwayID:C1cyc","GO:0019753"],"synonyms":[{"name":"one carbon metabolic process","type":"exact"},{"name":"one carbon metabolism","type":"exact"},{"name":"one-carbon metabolism","type":"exact"},{"name":"one-carbon transfer metabolic process","type":"exact"},{"name":"one-carbon transfer metabolism","type":"exact"}],"termid":"GO:0006730","terms_by_termid":{"GO:0006730":null,"GO:0035999":null}}


id: GO:1905190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metaphase/anaphase transition of meiosis II.","definition_xrefs":["GOC:TermGenie","PMID:21389117","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902103"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiosis II","termid":"GO:1905189"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of meiosis II","termid":"GO:1990950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of metaphase/anaphase transition of meiosis II","synonyms":[{"name":"negative regulation of meiosis II metaphase/anaphase transition","type":"exact"}],"termid":"GO:1905190"}


id: MONDO:0015891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypogonadotropic hypogonadism associated with other endocrinopathies (obsolete MONDO:0015891)","secondary_identifiers":["Orphanet:181390"],"termid":"MONDO:0015891","xrefs":{"Monarch":{"xref_id":"0015891"}}}


id: GO:0018598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hydroxymethylsilanetriol + O2 + 2 H+ + 2 e- = 2 H2O + formylsilanetriol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete hydroxymethylsilanetriol oxidase activity (obsolete GO:0018598)","termid":"GO:0018598"}


id: PBO:0071462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 3","termid":"PBO:0071462"}


id: GO:0006582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"melanin metabolic process","synonyms":[{"name":"melanin metabolism","type":"exact"}],"termid":"GO:0006582"}


id: GO:0051676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pullulan, a neutral linear polysaccharide composed of repeating units of maltotriose joined by alpha-(1,6)-linkages.","definition_xrefs":["PMID:15013381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"pullulan metabolic process","synonyms":[{"name":"pullulan metabolism","type":"exact"}],"termid":"GO:0051676"}


id: GO:0005151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Type II interleukin-1 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor binding","termid":"GO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-1, type II receptor binding","synonyms":[{"name":"IL-1 type II","type":"narrow"},{"name":"interleukin-1, type II receptor ligand","type":"narrow"}],"termid":"GO:0005151"}


id: PBO:0084693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial DNA-binding protein; involved in mitochondrial DNA replication and recombination, member of HMG1 DNA-binding protein family; activity may be regulated by protein kinase A phosphorylation; ABF2 has a paralog, IXR1, that arose from the whole genome duplication; human homolog TFAM can complement yeast abf2 mutant, rescuing the loss-of-mitochondrial DNA phenotype","termid":"PBO:0084693"}


id: PBO:0044654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 5","termid":"PBO:0044654"}


id: MONDO:1012751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe skeletal dysplasia characterized by shortened long bones, abnormal vertebrae, depressed nasal bridge, and cleft palate that occurs in pigs due to a mutation in the COL2A1 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:32450343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia, COL2A1-related, pig","secondary_identifiers":["OMIA:001926-9823"],"synonyms":[{"name":"achondrogenesis, type II in Sus scrofa (pig)","type":"related"}],"termid":"MONDO:1012751","xrefs":{"Monarch":{"xref_id":"1012751"}}}


id: GO:0032425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mismatch repair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mismatch repair","termid":"GO:0032423"},{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"positively_regulates","term_name":"mismatch repair","termid":"GO:0006298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"positive regulation of mismatch repair","synonyms":[{"name":"activation of mismatch repair","type":"narrow"},{"name":"stimulation of mismatch repair","type":"narrow"},{"name":"up regulation of mismatch repair","type":"exact"},{"name":"up-regulation of mismatch repair","type":"exact"},{"name":"upregulation of mismatch repair","type":"exact"}],"termid":"GO:0032425"}


id: PBO:0090894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF for Rho1 Rgf2","termid":"PBO:0090894"}


id: GO:0016296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexadecanoyl-[ACP] + H2O = H+ + hexadecanoate + holo-[ACP].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete palmitoyl-[acyl-carrier-protein] hydrolase activity (obsolete GO:0016296)","synonyms":[{"name":"palmitoyl-ACP hydrolase activity","type":"exact"},{"name":"palmitoyl-[acyl-carrier protein] hydrolase activity","type":"exact"}],"termid":"GO:0016296"}


id: MONDO:0851095
data:
  {"annotated_genes":["SJAG_02238"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86383],"is_not":false,"summary":null,"term":"MONDO:0851095"}]},"cv_name":"mondo","definition":"A syndrome characterized by developmental delay, impaired intellectual development, seizures, mesomelic dysplasia, dysmorphic facial features, horseshoe or hypoplastic kidney, and failure to thrive that has material basis in heterozygous mutation in AFF3 on chromosome 2q11.2.","definition_xrefs":["DOID:0112383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"KINSSHIP syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5543317","OMIM:619297","MEDGEN:1779339"],"termid":"MONDO:0851095","terms_by_termid":{"MONDO:0851095":null},"xrefs":{"Monarch":{"xref_id":"0851095"}}}


id: MOD:01764
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-131 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-131 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01764"}


id: PATO:0001358
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having a knob or knoblike protuberance.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"umbonate","termid":"PATO:0001358"}


id: MONDO:0006780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tick-borne septicemic disease of domestic and wild ruminants caused by ehrlichia ruminantium.","definition_xrefs":["MESH:D006357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"ehrlichiosis, non-human animal","termid":"MONDO:0700205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heartwater disease","synonyms":[{"name":"disease, heartwater","type":"related"}],"termid":"MONDO:0006780","xrefs":{"Monarch":{"xref_id":"0006780"}}}


id: PBO:0069728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1009, pseudogene","termid":"PBO:0069728"}


id: GO:0010311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a lateral root. This process pertains to the initial formation of a structure from unspecified parts. A lateral root primordium represents an organized group of cells derived from the root pericycle that will differentiate into a new root, as opposed to the initiation of the main root from the embryo proper.","definition_xrefs":["GOC:tair_curators","PMID:17259263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"plant organ formation","termid":"GO:1905393"},{"relation_name":"part_of","term_name":"lateral root morphogenesis","termid":"GO:0010102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root formation","secondary_identifiers":["GO:0010386"],"synonyms":[{"name":"lateral root primordium development","type":"exact"}],"termid":"GO:0010311"}


id: PBO:0089816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex protein phosphotransferase subunit Ppk26","termid":"PBO:0089816"}


id: GO:0048102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death that is accompanied by the formation of autophagosomes. Autophagic cell death is characterized by lack of chromatin condensation and massive vacuolization of the cytoplasm, with little or no uptake by phagocytic cells.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis","GOC:autophagy","PMID:23347517","PMID:18846107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autophagic cell death","synonyms":[{"name":"autophagic death","type":"broad"},{"name":"autosis","type":"related"},{"name":"programmed cell death by autophagy","type":"broad"},{"name":"programmed cell death by macroautophagy","type":"exact"},{"name":"type II programmed cell death","type":"related"}],"termid":"GO:0048102"}


id: GO:0036323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a vascular endothelial growth factor receptor-1 (VEGFR-1) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","Wikipedia:FLT1","Wikipedia:VEGF_receptors","GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor-1 signaling pathway","synonyms":[{"name":"FLT1 signaling pathway","type":"exact"},{"name":"VEGFR-1 signaling pathway","type":"exact"},{"name":"VEGFR1 signaling pathway","type":"exact"}],"termid":"GO:0036323"}


id: PBO:0077903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase pseudogene 1","termid":"PBO:0077903"}


id: FYPO:0003625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the microtubule cytoskeleton is abnormal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton morphology during mitotic interphase","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal microtubule cytoskeleton morphology during mitotic interphase during vegetative growth","type":"related"}],"termid":"FYPO:0003625"}


id: MONDO:1010742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary severe ulcerative dermatitis, growth restriction and increased infectious disease susceptibility in cattle due to a variation in the IL17RA gene.","definition_xrefs":["PMID:32448141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency IL17RA-related, cattle","secondary_identifiers":["OMIA:002271-9913"],"termid":"MONDO:1010742","xrefs":{"Monarch":{"xref_id":"1010742"}}}


id: MONDO:0022463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anophthalmia megalocornea cardiopathy skeletal anomalies (obsolete MONDO:0022463)","termid":"MONDO:0022463","xrefs":{"Monarch":{"xref_id":"0022463"}}}


id: GO:0002802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antifungal peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide secretion","termid":"GO:0002796"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide secretion","termid":"GO:0002800"},{"relation_name":"is_a","term_name":"positive regulation of antifungal peptide production","termid":"GO:0002804"},{"relation_name":"positively_regulates","term_name":"antifungal peptide secretion","termid":"GO:0002782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0010467"],"is_obsolete":false,"name":"positive regulation of antifungal peptide secretion","synonyms":[{"name":"activation of antifungal peptide secretion","type":"narrow"},{"name":"stimulation of antifungal peptide secretion","type":"narrow"},{"name":"up regulation of antifungal peptide secretion","type":"exact"},{"name":"up-regulation of antifungal peptide secretion","type":"exact"},{"name":"upregulation of antifungal peptide secretion","type":"exact"}],"termid":"GO:0002802"}


id: PBO:0081388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 227","termid":"PBO:0081388"}


id: MONDO:0004956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the prostate gland and has spread to other anatomic sites.","definition_xrefs":["NCIT:C8946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic prostate carcinoma","secondary_identifiers":["EFO:0000196","MEDGEN:215232","SCTID:314994000","UMLS:C0936223","ICD9:199.1"],"synonyms":[{"name":"metastatic prostate cancer","type":"exact"},{"name":"metastatic prostate carcinoma","type":"exact"},{"name":"prostate cancer metastatic","type":"exact"},{"name":"prostate carcinoma metastatic","type":"exact"}],"termid":"MONDO:0004956","xrefs":{"Monarch":{"xref_id":"0004956"}}}


id: PBO:0058321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4694","termid":"PBO:0058321"}


id: MONDO:0054740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any blepharo-cheilo-odontic syndrome in which the cause of the disease is a mutation in the CDH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blepharocheilodontic syndrome","termid":"MONDO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"blepharocheilodontic syndrome 1","secondary_identifiers":["DOID:0080345","OMIM:119580","MEDGEN:1632198","UMLS:C4551988"],"synonyms":[{"name":"BCD syndrome","type":"related"},{"name":"BCDS1","type":"related"},{"name":"CDH1 blepharo-cheilo-odontic syndrome","type":"exact"},{"name":"Lagophthalmia with bilateral cleft 51P and palate","type":"related"},{"name":"blepharo-cheilo-odontic syndrome caused by mutation in CDH1","type":"exact"},{"name":"blepharocheilodontic syndrome","type":"related"},{"name":"blepharocheilodontic syndrome 1","type":"exact"},{"name":"clefting, ectropion, and conical teeth","type":"related"},{"name":"ectropion, Inferior, with cleft 51P and/Or palate","type":"related"},{"name":"elschnig syndrome","type":"related"}],"termid":"MONDO:0054740","xrefs":{"Monarch":{"xref_id":"0054740"}}}


id: FYPO:0007725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to late endosomes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to late endosome","synonyms":[{"name":"normal protein localisation to late endosome","type":"exact"},{"name":"normal protein localization to PVE","type":"exact"},{"name":"normal protein localization to late endosome during mitotic cell cycle","type":"related"},{"name":"normal protein localization to late endosome during vegetative growth","type":"exact"},{"name":"normal protein localization to prevacuolar compartment","type":"exact"},{"name":"normal protein localization to prevacuolar endosome","type":"exact"}],"termid":"FYPO:0007725"}


id: PBO:0110163
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in eukarytoes only","termid":"PBO:0110163"}


id: MONDO:0019494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiac tumors are benign or malignant neoplasms arising primarily in the inner lining, muscle layer, or the surrounding pericardium of the heart. They can be primary or metastatic.","definition_xrefs":["Orphanet:875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart neoplasm","termid":"MONDO:0021209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"primary pediatric heart tumor","secondary_identifiers":["GARD:18710","UMLS:C4274356","ICD10CM:D15.1","MEDGEN:895113"],"synonyms":[{"name":"Cardiac tumor of child","type":"exact"},{"name":"Cardiac tumour of child","type":"exact"},{"name":"heart tumor of child","type":"exact"},{"name":"heart tumour of child","type":"exact"},{"name":"paediatric heart neoplasm","type":"exact"},{"name":"pediatric heart neoplasm","type":"exact"}],"termid":"MONDO:0019494","xrefs":{"Monarch":{"xref_id":"0019494"}}}


id: GO:0098814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The low level of synaptic transmission that occurs via spontaneous neurotransmitter release into the synaptic cleft in the absence of a presynaptic action potential.","definition_xrefs":["PMID:20200227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"spontaneous synaptic transmission","synonyms":[{"name":"basal synaptic transmission","type":"exact"}],"termid":"GO:0098814"}


id: MONDO:0018866
data:
  {"annotated_genes":["SJAG_02039","SJAG_00400","SJAG_01884","SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[84975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[84978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[85064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"}]},"cv_name":"mondo","definition":"Aicardi-Goutieres syndrome (AGS) is an inherited, subacute encephalopathy characterized by the association of basal ganglia calcification, leukodystrophy and cerebrospinal fluid (CSF) lymphocytosis.","definition_xrefs":["Orphanet:51"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete Moyamoya syndrome (obsolete MONDO:0018792)","termid":"MONDO:0018792"},{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"Aicardi-Goutieres syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:111728","NANDO:2200893","MEDGEN:97953","MESH:C535607","OMIMPS:225750","NANDO:1200996","GARD:575","SCTID:230312006","UMLS:C0393591","ICD9:333.0","NANDO:2100244","DOID:0050629"],"synonyms":[{"name":"AGS","type":"related"},{"name":"Aicardi Goutieres syndrome","type":"exact"},{"name":"Aicardi-Goutières Syndrome","type":"exact"},{"name":"Aicardi-Goutières syndrome","type":"related"},{"name":"Cree encephalitis","type":"exact"},{"name":"encephalopathy with basal ganglia calcification","type":"exact"},{"name":"encephalopathy with intracranial calcification and chronic lymphocytosis of cerebrospinal fluid","type":"exact"},{"name":"encephalopathy, familial infantile, with calcification of basal ganglia and chronic cerebrospinal fluid lymphocytosis","type":"related"},{"name":"pseudotoxoplasmosis syndrome","type":"related"}],"termid":"MONDO:0018866","terms_by_termid":{"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0014007":null},"xrefs":{"Monarch":{"xref_id":"0018866"}}}


id: PBO:0056211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B6","termid":"PBO:0056211"}


id: PBO:0013022
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DHODH","termid":"PBO:0013022"}


id: PBO:0049628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 31","termid":"PBO:0049628"}


id: PBO:0030229
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_steady-state_intracellular_calcium_level_following_extracellular_calcium_stimulus","termid":"PBO:0030229"}


id: PBO:0034193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ubiquitously_expressed_in","termid":"PBO:0034193"}


id: PBO:0083327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF SRC1/YML034W","termid":"PBO:0083327"}


id: GO:0004514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CO2 + diphosphate + nicotinate D-ribonucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + 2 H+ + quinolinate.","definition_xrefs":["EC:2.4.2.19","RHEA:12733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nicotinate-nucleotide diphosphorylase (carboxylating) activity","secondary_identifiers":["KEGG_REACTION:R03348","Reactome:R-HSA-197268","MetaCyc:QUINOPRIBOTRANS-RXN"],"synonyms":[{"name":"NAD pyrophosphorylase activity","type":"related"},{"name":"QAPRTase activity","type":"related"},{"name":"nicotinate mononucleotide pyrophosphorylase (carboxylating)","type":"related"},{"name":"nicotinate-nucleotide pyrophosphorylase (carboxylating) activity","type":"exact"},{"name":"nicotinate-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase (carboxylating)","type":"related"},{"name":"quinolinate phosphoribosyltransferase (decarboxylating) activity","type":"related"},{"name":"quinolinic acid phosphoribosyltransferase activity","type":"related"},{"name":"quinolinic phosphoribosyltransferase activity","type":"related"}],"termid":"GO:0004514"}


id: PBO:0072699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUSF1 divergent transcript","termid":"PBO:0072699"}


id: PBO:0113220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein; binds to the 3'UTR of cell wall-related mRNAs and stabilizes these mRNAs, acting in parallel to cell wall integrity signaling to maintain expression of cell wall genes during stress; acts antagonistically to Nab6p; deletion mutants display increased sensitivity to some cell wall disrupting agents; expression negatively regulated by cAMP","termid":"PBO:0113220"}


id: SO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_acceptor_variant (SO:0001574) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_acceptor_variant","termid":"SO:0001574"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_acceptor_variant_NMD_triggering","synonyms":[{"name":"splice acceptor variant-NMD triggering","type":"exact"},{"name":"splice acceptor variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002327"}


id: PBO:0056720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meprin A subunit alpha pseudogene 2","termid":"PBO:0056720"}


id: MOD:01394
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two serine residues and a cysteine residue by formation of a 5-amino-3,4,5,6-tetrahydropyridine-2,5-dicarboxylic acid.","definition_xrefs":["PubMed:11320328","RESID:AA0471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridinyl ring crosslinked residues","termid":"MOD:01425"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine 5-amino-3,4,5,6-tetrahydropyridine-2,5-dicarboxylic acid","synonyms":[{"name":"(5R,6R)-5-amino-6-[(1R)-1-amino-2-sulfanylethyl]-3,4,5,6-tetrahydropyridine-2,5-dicarboxylic acid","type":"exact"},{"name":"CROSSLNK 5-amino-piperideine-2,5-dicarboxylic acid","type":"related"},{"name":"L-cysteine 5-amino-3,4,5,6-tetrahydropyridine-2,5-dicarboxylic acid","type":"exact"},{"name":"L-cysteine 5-aminopiperideine-2,5-dicarboxylic acid","type":"exact"}],"termid":"MOD:01394"}


id: SO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transmissible element containing genes involved in symbiosis, analogous to the pathogenicity islands of gram negative bacteria.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbiosis_island","synonyms":[{"name":"symbiosis island","type":"exact"}],"termid":"SO:0000776"}


id: PBO:0044060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin E/M","termid":"PBO:0044060"}


id: PBO:0036084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_TR_box","termid":"PBO:0036084"}


id: GO:0010746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of plasma membrane long-chain fatty acid transport. Plasma membrane long-chain fatty acid transport is the directed movement of long-chain fatty acids across the plasma membrane. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of long-chain fatty acid import into cell","termid":"GO:0140212"},{"relation_name":"regulates","term_name":"long-chain fatty acid import across plasma membrane","termid":"GO:0015911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of long-chain fatty acid import across plasma membrane","synonyms":[{"name":"regulation of plasma membrane long-chain fatty acid transport","type":"exact"}],"termid":"GO:0010746"}


id: PBO:0047363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 17","termid":"PBO:0047363"}


id: PBO:0091311
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Cut Nine","termid":"PBO:0091311"}


id: FYPO:0006141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing gluconate as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"},{"relation_name":"is_a","term_name":"decreased cell population growth on gluconate carbon source","termid":"FYPO:0001830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell population growth on gluconate carbon source","synonyms":[{"name":"abolished gluconate utilization","type":"related"},{"name":"abolished growth on gluconate carbon source","type":"broad"},{"name":"abolished vegetative cell population growth on gluconate carbon source","type":"exact"},{"name":"cell population growth on gluconate carbon source abolished","type":"exact"}],"termid":"FYPO:0006141"}


id: PBO:0057056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 141","termid":"PBO:0057056"}


id: PBO:0081877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 821","termid":"PBO:0081877"}


id: FYPO:0005782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer mitotic checkpoint complexes than normal.","definition_xrefs":["PomBase:mah","PMID:26882497","GO:0033597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitotic checkpoint complex level","synonyms":[{"name":"decreased MCC level","type":"related"},{"name":"decreased mitotic checkpoint complex level during mitotic cell cycle","type":"related"},{"name":"decreased mitotic checkpoint complex level during vegetative growth","type":"exact"},{"name":"mitotic checkpoint complexes present at decreased level","type":"exact"},{"name":"reduced mitotic checkpoint complex level","type":"exact"}],"termid":"FYPO:0005782"}


id: MONDO:0008752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alexander disease (AxD) is a rare neurodegenerative disorder of the astrocytes comprised of two clinical forms: AxD Type I and Type II manifesting with various degrees of macrocephaly, spasticity, ataxia and seizures and leading to psychomotor regression and death.","definition_xrefs":["Orphanet:58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Alexander disease","secondary_identifiers":["GARD:5774","NCIT:C84545","DOID:4252","MEDGEN:78724","NANDO:1200554","NANDO:2200835","MESH:D038261","SCTID:81854007","UMLS:C0270726","icd11.foundation:2023359698","NORD:749","OMIM:203450"],"synonyms":[{"name":"ALXDRD","type":"related"},{"name":"Alexander disease","type":"exact"},{"name":"Alexander's disease","type":"exact"},{"name":"AxD","type":"exact"},{"name":"alexanders leukodystrophy","type":"related"},{"name":"megalencephaly in infancy accompanied by progressive spasticity and dementia","type":"related"}],"termid":"MONDO:0008752","xrefs":{"Monarch":{"xref_id":"0008752"}}}


id: PBO:0055318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2746","termid":"PBO:0055318"}


id: MONDO:0001203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of lacrimal gland","termid":"MONDO:0024625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"prolapse of lacrimal gland","secondary_identifiers":["UMLS:C0155231","DOID:11134","SCTID:84777002","ICD9:375.16","MEDGEN:509860"],"synonyms":[{"name":"dislocation of lacrimal gland","type":"exact"}],"termid":"MONDO:0001203","xrefs":{"Monarch":{"xref_id":"0001203"}}}


id: GO:0019126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The racemization of peptidyl-serine.","definition_xrefs":["RESID:AA0195"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine racemization (obsolete GO:0019126)","termid":"GO:0019126"}


id: PBO:0064555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)","termid":"PBO:0064555"}


id: PBO:0055729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain only 3","termid":"PBO:0055729"}


id: FYPO:0004571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during cellular response to oxidative stress","termid":"FYPO:0001279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"increased RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"increased RNA level during cellular response to H2O2","type":"exact"},{"name":"increased RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"increased transcript level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004571"}


id: GO:0009986
data:
  {"annotated_genes":["SJAG_01835","SJAG_04398","SJAG_03521","SJAG_01975","SJAG_00784","SJAG_02435","SJAG_02076","SJAG_04720","SJAG_02580","SJAG_03295","SJAG_02959","SJAG_04238","SJAG_00667","SJAG_00481","SJAG_01029","SJAG_04875","SJAG_02173","SJAG_04851","SJAG_03998","SJAG_04723","SJAG_04850","SJAG_03204","SJAG_04864","SJAG_01755","SJAG_00096","SJAG_02131","SJAG_01861","SJAG_01017","SJAG_00218","SJAG_02711","SJAG_01086","SJAG_00310","SJAG_00109","SJAG_00981","SJAG_03640","SJAG_00485","SJAG_00254","SJAG_01290","SJAG_05272","SJAG_02916","SJAG_00781","SJAG_04685","SJAG_00340","SJAG_02649","SJAG_02192","SJAG_00239","SJAG_02093","SJAG_03824","SJAG_04789","SJAG_00415","SJAG_04209","SJAG_02260"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66430,71027,73988,76122,77641,79916,87367,87368,87855,91650,92974,95493,95894,95895,96728,103028,103092,106085,106614,115375],"is_not":false,"summary":null,"term":"GO:0009986"},{"annotations":[88479],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010339"},{"annotations":[102515,102765,106656,116355,102764],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070263"},{"annotations":[89711,91375,95068,112821,118566,117135,89909,94643,102045,114161,114547,115393,118131,114266,113526,117575,94644,93844,94630,102046,103792,106354,116062,94642,102038,107569],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009897"}]},"cv_name":"cellular_component","definition":"The external part of the cell wall and/or plasma membrane.","definition_xrefs":["GOC:mtg_sensu","GOC:sm","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00218":null,"SJAG_00239":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00340":null,"SJAG_00415":null,"SJAG_00481":null,"SJAG_00485":null,"SJAG_00667":null,"SJAG_00781":null,"SJAG_00784":null,"SJAG_00981":null,"SJAG_01017":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01290":null,"SJAG_01755":null,"SJAG_01835":null,"SJAG_01861":null,"SJAG_01975":null,"SJAG_02076":null,"SJAG_02093":null,"SJAG_02131":null,"SJAG_02173":null,"SJAG_02192":null,"SJAG_02260":null,"SJAG_02435":null,"SJAG_02580":null,"SJAG_02649":null,"SJAG_02711":null,"SJAG_02916":null,"SJAG_02959":null,"SJAG_03204":null,"SJAG_03295":null,"SJAG_03521":null,"SJAG_03640":null,"SJAG_03824":null,"SJAG_03998":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04398":null,"SJAG_04685":null,"SJAG_04720":null,"SJAG_04723":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04864":null,"SJAG_04875":null,"SJAG_05272":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell surface","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0009929","GO:0009928"],"synonyms":[{"name":"cell associated","type":"exact"},{"name":"cell bound","type":"exact"}],"termid":"GO:0009986","terms_by_termid":{"GO:0009897":null,"GO:0009986":null,"GO:0010339":null,"GO:0070263":null}}


id: PBO:0066098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASAL2 antisense RNA 1","termid":"PBO:0066098"}


id: GO:0071550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a death domain (DD) interaction, as part of the extrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","GOC:amm","InterPro:IPR000488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"death-inducing signaling complex assembly","secondary_identifiers":["Reactome:R-HSA-5357786"],"synonyms":[{"name":"DD-mediated complex assembly","type":"exact"},{"name":"DISC assembly","type":"exact"},{"name":"DISC formation","type":"exact"},{"name":"death domain-mediated complex assembly","type":"exact"},{"name":"death domain-mediated complex assembly involved in extrinsic apoptotic pathway","type":"exact"},{"name":"death-inducing signaling complex formation","type":"exact"},{"name":"death-inducing signalling complex assembly","type":"exact"}],"termid":"GO:0071550"}


id: GO:0014902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle cell differentiation","termid":"GO:0051146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myotube differentiation","termid":"GO:0014902"}


id: PBO:0047580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3","termid":"PBO:0047580"}


id: GO:0052679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: terpentedienyl diphosphate = diphosphate + terpentetriene.","definition_xrefs":["RHEA:25617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"terpentetriene synthase activity","secondary_identifiers":["EC:4.2.3.36","MetaCyc:RXN-9455"],"synonyms":[{"name":"terpentedienyl-diphosphate diphosphate-lyase (terpentetriene-forming) activity","type":"exact"}],"termid":"GO:0052679"}


id: PBO:0063140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAS domain containing serine/threonine kinase","termid":"PBO:0063140"}


id: PR:Q10211
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.03c gene.","definition_xrefs":["UniProtKB:Q10211","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.03c","synonyms":[{"name":"Spom972h-SPAC4H3.03c","type":"exact"}],"termid":"PR:Q10211"}


id: PBO:0110811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type, meiosis-specific copper activator, Mca1","termid":"PBO:0110811"}


id: PBO:0065416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta 3 pseudogene 2","termid":"PBO:0065416"}


id: MONDO:0002188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from sweat glands in the vulva and is characterized by the presence of lobules composed of epithelial cells with clear cytoplasm.","definition_xrefs":["NCIT:C40312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar benign neoplasm","termid":"MONDO:0000643"},{"relation_name":"is_a","term_name":"nodular hidradenoma","termid":"MONDO:0002189"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"},{"relation_name":"is_a","term_name":"benign epithelial skin neoplasm","termid":"MONDO:0024666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"vulvar nodular hidradenoma","secondary_identifiers":["DOID:2060","MEDGEN:276994","UMLS:C1520091"],"synonyms":[{"name":"mammalian vulva nodular hidradenoma","type":"exact"},{"name":"nodular hidradenoma of mammalian vulva","type":"exact"},{"name":"vulvar nodular hidradenoma","type":"exact"}],"termid":"MONDO:0002188","xrefs":{"Monarch":{"xref_id":"0002188"}}}


id: MONDO:0021029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of sebaceous gland anomaly that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary epidermal appendage anomaly","termid":"MONDO:0021026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary sebaceous gland anomaly","secondary_identifiers":["GARD:20268","MEDGEN:1843175","UMLS:C5680577","Orphanet:183460"],"synonyms":[{"name":"genetic sebaceous gland anomaly","type":"exact"}],"termid":"MONDO:0021029","xrefs":{"Monarch":{"xref_id":"0021029"}}}


id: GO:0098901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:dos","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"}


id: MONDO:0016060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A laryngo-tracheo-esophageal cleft (LC) is a congenital malformation characterized by an abnormal, posterior, sagittal communication between the larynx and the pharynx, possibly extending downward between the trachea and the esophagus.","definition_xrefs":["Orphanet:2004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"},{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft","secondary_identifiers":["SCTID:232461002","GARD:3188","NCIT:C98622","icd11.foundation:271795917","MESH:C537875"],"synonyms":[{"name":"LC","type":"exact"},{"name":"LTEC","type":"exact"},{"name":"Larnygeotracheoesophageal cleft","type":"exact"},{"name":"congenital cleft larynx","type":"exact"},{"name":"laryngeal cleft","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft","type":"exact"},{"name":"laryngo-tracheo-esophageal diastema","type":"exact"},{"name":"tracheal cleft","type":"exact"}],"termid":"MONDO:0016060","xrefs":{"Monarch":{"xref_id":"0016060"}}}


id: PBO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative splicing possible. Evidence of transcript missing final intron","termid":"PBO:0001642"}


id: PBO:0085979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; protein abundance increases in response to DNA replication stress","termid":"PBO:0085979"}


id: PBO:0017048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug45","termid":"PBO:0017048"}


id: PBO:0017652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoadipate transaminase (predicted)","termid":"PBO:0017652"}


id: GO:0004435
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72433],"is_not":false,"summary":null,"term":"GO:0004435"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1,2-diacylglycerol + 1D-myo-inositol 1,4,5-trisphosphate + H+.","definition_xrefs":["EC:3.1.4.11","RHEA:33179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"phosphatidylinositol phospholipase C activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-111879","Reactome:R-HSA-1855214","Reactome:R-HSA-5607735","Reactome:R-HSA-202407","MetaCyc:3.1.4.11-RXN","Reactome:R-HSA-167686","Reactome:R-HSA-2730847","Reactome:R-HSA-1855177","Reactome:R-HSA-9717205","KEGG_REACTION:R03435","Reactome:R-HSA-1855221","Reactome:R-HSA-622382","Reactome:R-HSA-9032478"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol-4,5-bisphosphate inositoltrisphosphohydrolase activity","type":"related"},{"name":"1-phosphatidyl-D-myo-inositol-4,5-bisphosphate inositoltrisphosphohydrolase activity","type":"related"},{"name":"1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase activity","type":"exact"},{"name":"PI-PLC activity","type":"related"},{"name":"monophosphatidylinositol phosphodiesterase activity","type":"broad"},{"name":"phosphatidylinositol-4,5-bisphosphate hydrolysis","type":"related"},{"name":"phosphoinositidase C activity","type":"related"},{"name":"phosphoinositide phospholipase C activity","type":"related"},{"name":"triphosphoinositide phosphodiesterase activity","type":"broad"}],"termid":"GO:0004435","terms_by_termid":{"GO:0004435":null}}


