# terms

id: GO:0033184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the addition of a ubiquitin group to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone ubiquitination (obsolete GO:0033184)","termid":"GO:0033184"}


id: PBO:0068614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 65, pseudogene","termid":"PBO:0068614"}


id: PR:Q9UTL0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic spindle-associated MMXD complex subunit MIP18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIP18 family protein C144.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.16","secondary_identifiers":["UniProtKB:Q9UTL0"],"synonyms":[{"name":"Spom972h-FAM96B","type":"exact"}],"termid":"PR:Q9UTL0"}


id: PBO:0045811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 1","termid":"PBO:0045811"}


id: PR:O43045
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An iron-sulfur cluster assembly 2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10072:SF26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur assembly protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.17","secondary_identifiers":["UniProtKB:O43045"],"synonyms":[{"name":"SPBC3B9.17","type":"related"},{"name":"Spom972h-ISCA2","type":"exact"}],"termid":"PR:O43045"}


id: GO:0072314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular epithelial cell. Glomerular epithelial cells are specialized epithelial cells that form part of the glomerulus; there are two types, glomerular parietal epithelial cells and glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"}


id: PBO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar carboxypeptidase Y","termid":"PBO:0002341"}


id: GO:0061409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a freezing stimulus, temperatures below 0 degrees Celsius.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to freezing (obsolete GO:0061409)","termid":"GO:0061409"}


id: GO:0102145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + H2O = (3R,6E)-nerolidol + diphosphoric acid.","definition_xrefs":["RHEA:27534","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(3R)-(E)-nerolidol synthase activity","secondary_identifiers":["EC:4.2.3.49","MetaCyc:RXN-11575"],"termid":"GO:0102145"}


id: RO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has output c iff c is a participant in p, c is present at the end of p, and c is not present at the beginning of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output","termid":"RO:0002234"}


id: PBO:0057659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1251","termid":"PBO:0057659"}


id: GO:0006265
data:
  {"annotated_genes":["SJAG_05193","SJAG_02394","SJAG_04418","SJAG_03567","SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59146,70219,72617,112968,118733],"is_not":false,"summary":null,"term":"GO:0006265"}]},"cv_name":"biological_process","definition":"The process in which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number.","definition_xrefs":["ISBN:071673706X","ISBN:0935702490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"DNA conformation change","termid":"GO:0071103"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02394":null,"SJAG_03567":null,"SJAG_04418":null,"SJAG_04816":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA topological change","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA underwinding","type":"narrow"}],"termid":"GO:0006265","terms_by_termid":{"GO:0006265":null}}


id: _global:has_function
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_characteristic","termid":"_global:has_characteristic"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_function","secondary_identifiers":["RO:0000085"],"termid":"_global:has_function"}


id: PBO:0027919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_papuamide_B_during_vegetative_growth","termid":"PBO:0027919"}


id: PBO:0072557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding B","termid":"PBO:0072557"}


id: PBO:0065234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 2","termid":"PBO:0065234"}


id: MONDO:0002060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraluminal papillary epithelial neoplasm arising within the ducts. Representative examples are the intraductal breast papilloma and the salivary gland intraductal papilloma.","definition_xrefs":["NCIT:C3785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal papilloma","secondary_identifiers":["UMLS:C0206713","MEDGEN:61667","icd11.foundation:288706574","ICDO:8503/0","DOID:1627","MESH:D018300"],"synonyms":[{"name":"duct adenoma","type":"exact"},{"name":"duct papilloma","type":"exact"},{"name":"ductal papilloma","type":"exact"},{"name":"intraductal papilloma","type":"exact"},{"name":"intraductal papilloma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002060","xrefs":{"Monarch":{"xref_id":"0002060"}}}


id: PBO:0039824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor interacting protein 1","termid":"PBO:0039824"}


id: GO:0010972
data:
  {"annotated_genes":["SJAG_03067","SJAG_00082","SJAG_02858","SJAG_01605","SJAG_04671","SJAG_02723","SJAG_04394","SJAG_01044","SJAG_01076","SJAG_03160","SJAG_02592","SJAG_01680","SJAG_01010","SJAG_03695","SJAG_01855","SJAG_02332","SJAG_01118","SJAG_03927","SJAG_00600","SJAG_03854","SJAG_00364","SJAG_02771","SJAG_03026","SJAG_03602","SJAG_00640","SJAG_02563","SJAG_05373","SJAG_02392","SJAG_02098","SJAG_01873","SJAG_01205","SJAG_01084","SJAG_06592","SJAG_04597","SJAG_02266","SJAG_01429","SJAG_02576","SJAG_00526","SJAG_02074","SJAG_04280","SJAG_03073","SJAG_01146","SJAG_04287","SJAG_03942","SJAG_04332","SJAG_00318"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78286,92722,93015,93365,94162,100796,104294,106449,106813,108369,111229,111613,112271,114260],"is_not":false,"summary":null,"term":"GO:0010972"},{"annotations":[115797,101236,100339,89784,94202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[79225,106417,91225,98994,116597,109110,99161,117071,100340,70879,116898,111827,93758,72022,115853,78651,74582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[98229,95642,94333,115799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[109111,99163,88908,111522,116812,91226,117508,106418,100851,79088,90002,75031,72020,100341,91589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010389"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle G2/M phase transition","termid":"GO:1902750"},{"relation_name":"negatively_regulates","term_name":"G2/M transition of mitotic cell cycle","termid":"GO:0000086"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03160":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0008150","GO:0044772","GO:0007049"],"is_obsolete":false,"name":"negative regulation of G2/M transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of mitotic entry","type":"exact"}],"termid":"GO:0010972","terms_by_termid":{"GO:0007095":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0044878":null}}


id: GO:2000542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gastrulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastrulation","termid":"GO:0010470"},{"relation_name":"is_a","term_name":"negative regulation of embryonic development","termid":"GO:0045992"},{"relation_name":"negatively_regulates","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of gastrulation","termid":"GO:2000542"}


id: GO:0071788
data:
  {"annotated_genes":["SJAG_03812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64446],"is_not":false,"summary":null,"term":"GO:0071788"}]},"cv_name":"biological_process","definition":"The organization process that preserves the endoplasmic reticulum (ER) tubular network in a stable functional or structural state. The ER tubular network is the ER part that comprises the membranes with high curvature in cross-section.","definition_xrefs":["GOC:mah","PMID:16469703","PMID:20434336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"endoplasmic reticulum tubular network organization","termid":"GO:0071786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum tubular network maintenance","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"ER tubular network maintenance","type":"exact"}],"termid":"GO:0071788","terms_by_termid":{"GO:0071788":null}}


id: GO:2000968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell wall polysaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"positively_regulates","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell wall polysaccharide catabolic process","synonyms":[{"name":"positive regulation of cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000968"}


id: PR:P87125
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ure4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized urease accessory protein ureD-like (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.09c","synonyms":[{"name":"Spom972h-ure4","type":"exact"}],"termid":"PR:P87125"}


id: FYPO:0003689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0002779"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleolus","termid":"FYPO:0003688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleolus, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to nucleolus, with protein mislocalised to cytoplasm","type":"exact"},{"name":"abolished protein localization in nucleolus, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to nucleolus, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleolus, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to nucleolus abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003689"}


id: PBO:0084634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for m3U2843 methylation of the 25S rRNA; S-adenosylmethionine-dependent; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR063W is not an essential gene","termid":"PBO:0084634"}


id: PBO:0068488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 72, pseudogene","termid":"PBO:0068488"}


id: GO:1901814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of astaxanthin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00387","MetaCyc:PWY-5288","PMID:16434154","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"astaxanthin metabolic process","termid":"GO:1901813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"astaxanthin catabolic process","synonyms":[{"name":"astaxanthin breakdown","type":"exact"},{"name":"astaxanthin catabolism","type":"exact"},{"name":"astaxanthin degradation","type":"exact"}],"termid":"GO:1901814"}


id: GO:0060074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that organizes a synapse so that it attains its fully functional state. Synaptic maturation plays a critical role in the establishment of effective synaptic connections in early development.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synapse maturation","synonyms":[{"name":"synaptic maturation","type":"exact"}],"termid":"GO:0060074"}


id: GO:1900196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of penicillin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of penicillin metabolic process","termid":"GO:0033244"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"penicillin biosynthetic process","termid":"GO:0042318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"regulation of penicillin biosynthetic process","synonyms":[{"name":"regulation of penicillin anabolism","type":"exact"},{"name":"regulation of penicillin biosynthesis","type":"exact"},{"name":"regulation of penicillin formation","type":"exact"},{"name":"regulation of penicillin synthesis","type":"exact"}],"termid":"GO:1900196"}


id: PBO:0051014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 mRNA binding protein 1","termid":"PBO:0051014"}


id: GO:0008728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GTP = AMP + guanosine 3'-diphosphate 5'-triphosphate.","definition_xrefs":["EC:2.7.6.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphotransferase activity","termid":"GO:0016778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"GTP diphosphokinase activity","secondary_identifiers":["RHEA:22088","MetaCyc:GTPPYPHOSKIN-RXN"],"synonyms":[{"name":"(p)ppGpp synthetase I","type":"related"},{"name":"(p)ppGpp synthetase II","type":"related"},{"name":"ATP-GTP 3'-diphosphotransferase activity","type":"related"},{"name":"ATP:GTP 3'-diphosphotransferase activity","type":"related"},{"name":"GPSI","type":"related"},{"name":"GPSII","type":"related"},{"name":"GTP pyrophosphokinase activity","type":"exact"},{"name":"guanosine 3',5'-polyphosphate synthase activity","type":"related"},{"name":"guanosine 5',3'-polyphosphate synthetase activity","type":"related"},{"name":"guanosine pentaphosphate synthetase activity","type":"related"},{"name":"ppGpp synthetase I activity","type":"related"},{"name":"stringent factor activity","type":"related"}],"termid":"GO:0008728"}


id: GO:0005934
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The end of a cellular bud distal to the site of attachment to the mother cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"part_of","term_name":"cellular bud","termid":"GO:0005933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cellular bud tip","termid":"GO:0005934"}


id: PATO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A luminous flux quality inhering in a bearer by virtue of the bearer's emitting longer wavelength light following the absorption of shorter wavelength radiation; fluorescence is common with aromatic compounds with several rings joined together.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"luminous flux","termid":"PATO:0001296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescence","termid":"PATO:0000018"}


id: SO:0002143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 2B modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_2B_acetylation_site","synonyms":[{"name":"H2Bac","type":"exact"},{"name":"histone 2B acetylation site","type":"exact"}],"termid":"SO:0002143"}


id: GO:0061587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chromatin silencing process that results in the inhibition of RNA polymerase II-transcribed genes located in the vicinity of tRNA genes.","definition_xrefs":["PMID:30362930","PMID:30718362","PMID:23707796","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA locus-associated negative regulation of gene expression (obsolete GO:0061587)","synonyms":[{"name":"tDNA-mediated gene silencing","type":"exact"},{"name":"tRNA gene-mediated chromatin silencing","type":"exact"},{"name":"tRNA gene-mediated gene silencing","type":"exact"},{"name":"tgm silencing","type":"exact"},{"name":"transfer RNA gene-mediated chromatin silencing","type":"exact"},{"name":"transfer RNA gene-mediated gene silencing","type":"exact"},{"name":"transfer RNA gene-mediated silencinga","type":"exact"}],"termid":"GO:0061587"}


id: MONDO:0018086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulerythema ophryogenesis is characterized by inflammatory keratotic papules occurring on the face, which may be followed by scars, atrophy and alopecia. Prevalence is unknown but the disease, affecting mainly children and young adults, is rare. Erythema with mild hyperkeratosis of the hair follicles resulting in rough papules is observed on the cheeks and lateral aspects of the eyebrows. The disorder occasionally extends to the adjacent scalp, ears and forehead and rarely to the extensor surfaces of the limbs. Symptoms regress with age, although loss of the lateral aspects of the eyebrows can occur. Many cases occur sporadically; autosomal dominant inheritance has also been reported. There is no particular treatment, but patients should avoid sun exposure without UV protection.","definition_xrefs":["Orphanet:3406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis pilaris atrophicans","termid":"MONDO:0018855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ulerythema ophryogenesis","secondary_identifiers":["GARD:5395","UMLS:C5700076","MEDGEN:1813086"],"synonyms":[{"name":"keratosis pilaris affecting the follicles of the eyebrow hairs","type":"related"},{"name":"type of genodermatosis","type":"related"}],"termid":"MONDO:0018086","xrefs":{"Monarch":{"xref_id":"0018086"}}}


id: MONDO:0009196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare deafness characterized by the association of bilateral sensorineural hearing loss and white hair with scattered black tufts, as well as skin areas of hyper- and hypopigmentation. Additional reported features include global developmental delay and moderate intellectual disability, growth retardation, microcephaly, hypotonia, mild dysmorphic facial features (deeply set eyes, broad nasal bridge, slight bowing of the upper lip), retinal depigmentation, anomalies of the fingers and toes, and white matter abnormalities on brain imaging.","definition_xrefs":["Orphanet:999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ermine phenotype","secondary_identifiers":["MEDGEN:346466","OMIM:227010","ICD9:270.2","UMLS:C1856899","MESH:C535508","icd11.foundation:2048725507","MESH:C562663","SCTID:10170007","ICD10CM:E70.3","GARD:407"],"synonyms":[{"name":"BADS","type":"related"},{"name":"BADS syndrome","type":"related"},{"name":"O'Doherty syndrome","type":"exact"},{"name":"black locks with albinism and deafness syndrome","type":"related"},{"name":"black locks, oculocutaneous albinism, and deafness of the sensorineural type","type":"related"},{"name":"ermine phenotype","type":"exact"},{"name":"pigmentary disorder with hearing loss","type":"exact"}],"termid":"MONDO:0009196","xrefs":{"Monarch":{"xref_id":"0009196"}}}


id: MOD:01343
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00686. Remap to MOD:00686.","definition_xrefs":["PubMed:12148805","Unimod:162"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01343 selenium substitution for sulfur - site C (obsolete MOD:01343)","synonyms":[{"name":"Delta:S(-1)Se(1)","type":"related"},{"name":"Selenium replaces sulphur","type":"related"}],"termid":"MOD:01343"}


id: PBO:0086562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR103C is not an essential gene","termid":"PBO:0086562"}


id: PBO:0048999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC6 antisense RNA 1","termid":"PBO:0048999"}


id: PBO:0030878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vegetative_cell_population_growth","termid":"PBO:0030878"}


id: GO:1904630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diterpene stimulus.","definition_xrefs":["GO_REF:0000071","PMID:19765580","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to diterpene","termid":"GO:1904629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to diterpene","termid":"GO:1904630"}


id: PR:P78890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H3.15c gene.","definition_xrefs":["UniProtKB:P78890","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H3.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.15c","synonyms":[{"name":"Spom972h-SPAC23H3.15c","type":"exact"}],"termid":"PR:P78890"}


id: PBO:0045112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin matrix acidic phosphoprotein 1","termid":"PBO:0045112"}


id: MONDO:0008698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A finding indicating the lack of adequate relaxation of the lower esophageal sphincter resulting in difficulty swallowing food.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"idiopathic achalasia","termid":"MONDO:0019635"},{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"achalasia","secondary_identifiers":["DOID:9164","icd11.foundation:636464846","UMLS:C0014848","MEDGEN:5023","ICD9:530.0","SCTID:235630008","HP:0002571"],"synonyms":[{"name":"achalasia","type":"exact"},{"name":"achalasia (disease)","type":"exact"},{"name":"achalasia of cardia","type":"exact"},{"name":"achalasia of esophagus","type":"exact"},{"name":"achalasia of oesophagus","type":"exact"},{"name":"cardiospasm","type":"exact"},{"name":"esophageal achalasia","type":"exact"},{"name":"hypertensive lower esophageal sphincter","type":"exact"},{"name":"lack of reflex relaxation of lower oesophageal sphincter","type":"exact"}],"termid":"MONDO:0008698","xrefs":{"Monarch":{"xref_id":"0008698"}}}


id: MONDO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 1 disorder","termid":"MONDO:0700008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1, uniparental disomy 1q12 q21","secondary_identifiers":["GARD:1878","MESH:C538085","UMLS:C2931726","MEDGEN:419882"],"synonyms":[{"name":"Mosaic trisomy 1q12 q21","type":"related"},{"name":"uniparental disomy 1q12 q21","type":"related"}],"termid":"MONDO:0043085","xrefs":{"Monarch":{"xref_id":"0043085"}}}


id: PBO:0029231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0029231"}


id: PBO:0036209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_MTREC_complex_binding","termid":"PBO:0036209"}


id: FYPO:0005299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint during cellular response to UV","termid":"FYPO:0002102"},{"relation_name":"is_a","term_name":"normal mitotic G2 DNA damage checkpoint","termid":"FYPO:0006578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV","synonyms":[{"name":"normal G2 DNA damage checkpoint during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation during cellular response to UV","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0005299"}


id: GO:1990515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference where the silencing signal spreads 3' along the target mRNA, outside of the initial target sequence. Typically involves the formation of secondary siRNAs formed when the initial mRNA target sequence functions as a template for 5' to 3' synthesis of new dsRNA.","definition_xrefs":["GOC:pf","PMID:24369430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transitive RNA interference","termid":"GO:0036453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"3' transitive RNA interference","termid":"GO:1990515"}


id: MONDO:0009122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dohle bodies and leukemia","secondary_identifiers":["MEDGEN:346548","UMLS:C1857225","MESH:C565617","OMIM:223350"],"synonyms":[{"name":"Dohle bodies and leukemia","type":"exact"}],"termid":"MONDO:0009122","xrefs":{"Monarch":{"xref_id":"0009122"}}}


id: MONDO:0014993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myofibrillar myopathy in which the cause of the disease is a mutation in the PYROXD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myofibrillar myopathy 8","secondary_identifiers":["DOID:0080308","OMIM:617258","UMLS:C4310645","MEDGEN:934612"],"synonyms":[{"name":"MFM8","type":"related"},{"name":"PYROXD1 myofibrillar myopathy (disease)","type":"exact"},{"name":"myofibrillar myopathy (disease) caused by mutation in PYROXD1","type":"exact"},{"name":"myofibrillar myopathy 8","type":"exact"},{"name":"myopathy, myofibrillar, 8","type":"exact"},{"name":"myopathy, myofibrillar, type 8","type":"exact"}],"termid":"MONDO:0014993","xrefs":{"Monarch":{"xref_id":"0014993"}}}


id: MONDO:0011554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete deafness, nonsyndromic, modifier 1 (obsolete MONDO:0011554)","secondary_identifiers":["OMIM:605429"],"synonyms":[{"name":"DFNB26M","type":"related"},{"name":"DFNM1","type":"exact"},{"name":"Dfnb26, modifier of","type":"related"},{"name":"Dfnb26, suppressor of","type":"related"},{"name":"deafness, autosomal recessive 26, modifier OF","type":"related"},{"name":"deafness, autosomal recessive 26, modifier of","type":"related"},{"name":"deafness, nonsyndromic, modifier 1","type":"exact"},{"name":"deafness, nonsyndromic, modifier Of, 1","type":"related"}],"termid":"MONDO:0011554","xrefs":{"Monarch":{"xref_id":"0011554"}}}


id: PBO:0113467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface; Sen2p contains the active site for tRNA 5' splice site cleavage and has similarity to Sen34p and to Archaeal tRNA splicing endonuclease; localizes to the peroxisome in a Pex5p-dependent manner in oleate","termid":"PBO:0113467"}


id: PBO:0079091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-4","termid":"PBO:0079091"}


id: PBO:0084696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial external NADH dehydrogenase; catalyzes the oxidation of cytosolic NADH; Nde1p and Nde2p are involved in providing the cytosolic NADH to the mitochondrial respiratory chain; NDE2 has a paralog, NDE1, that arose from the whole genome duplication","termid":"PBO:0084696"}


id: FYPO:0004207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature siRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased siRNA level","synonyms":[{"name":"increased mature siRNA level","type":"exact"},{"name":"increased siRNA accumulation","type":"related"},{"name":"increased siRNA level during mitotic cell cycle","type":"related"},{"name":"increased siRNA level during vegetative growth","type":"exact"},{"name":"increased siRNA transcript level","type":"exact"},{"name":"increased small interfering RNA level","type":"exact"}],"termid":"FYPO:0004207"}


id: PR:G2TRN7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.06c gene.","definition_xrefs":["UniProtKB:G2TRN7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ DNA helicase-like protein C212.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.06c","synonyms":[{"name":"Spom972h-SPAC212.06c","type":"exact"}],"termid":"PR:G2TRN7"}


id: GO:0090379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall of seed trichomes after cell expansion is complete.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"},{"relation_name":"part_of","term_name":"seed trichome differentiation","termid":"GO:0090376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"secondary cell wall biogenesis involved in seed trichome differentiation","synonyms":[{"name":"secondary cell wall biosynthesis involved in seed trichome differentiation","type":"exact"},{"name":"seed trichome secondary wall biosynthesis","type":"related"}],"termid":"GO:0090379"}


id: PBO:0048481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 3, mucin type","termid":"PBO:0048481"}


id: PBO:0071378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 1","termid":"PBO:0071378"}


id: MONDO:0011520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 2","secondary_identifiers":["MEDGEN:343159","UMLS:C1854577","OMIM:605218"],"synonyms":[{"name":"SLEB2","type":"exact"},{"name":"susceptibility to systemic lupus erythematosus 2","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 2","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0011520","xrefs":{"Monarch":{"xref_id":"0011520"}}}


id: PBO:0089355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-diphospho-sugar transferase, unknown specificity","termid":"PBO:0089355"}


id: GO:0043051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the contraction and relaxation movements of the pharyngeal muscle that mediates feeding in nematodes.","definition_xrefs":["PMID:2181052","GOC:cab1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eating behavior","termid":"GO:1903998"},{"relation_name":"regulates","term_name":"nematode pharyngeal pumping","termid":"GO:0043050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode pharyngeal pumping","termid":"GO:0043051"}


id: PBO:0016984
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rer2 can form a catalytically active complex with S. cerevisiae Nus1p","termid":"PBO:0016984"}


id: FYECO:0000453
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"cells are first grown in medium containing trichostatin A, this medium is then replaced with medium containing no trichostatin A .","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recovery after trichostatin A treatment","termid":"FYECO:0000453"}


id: FYPO:0002513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein palmitoylation","termid":"FYPO:0002509"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during meiosis","termid":"FYPO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein palmitoylation during meiosis","synonyms":[{"name":"increased protein palmitoylation during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002513"}


id: MONDO:1010798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in cattle in which the cause of the disease is a mutation in the COL5A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, non-human animal","termid":"MONDO:1011425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic type, COL5A2-related, cattle","secondary_identifiers":["OMIA:002295-9913"],"synonyms":[{"name":"cEDS","type":"exact"}],"termid":"MONDO:1010798","xrefs":{"Monarch":{"xref_id":"1010798"}}}


id: GO:0000839
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates proteins with misfolded luminal domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p.","definition_xrefs":["GOC:elh","PMID:16873065","PMID:16873066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hrd1p ubiquitin ligase complex","termid":"GO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005783","GO:0032991","GO:0005575","GO:0005737","GO:0005789"],"is_obsolete":false,"name":"Hrd1p ubiquitin ligase ERAD-L complex","termid":"GO:0000839"}


id: PBO:0069786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1072, pseudogene","termid":"PBO:0069786"}


id: PBO:0049213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit associated protein 1","termid":"PBO:0049213"}


id: MONDO:0100005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary mast cell activation syndrome (obsolete MONDO:0100005)","termid":"MONDO:0100005","xrefs":{"Monarch":{"xref_id":"0100005"}}}


id: PBO:0065509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline and serine rich coiled-coil 1","termid":"PBO:0065509"}


id: MONDO:0017977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development of gynecological interest (obsolete MONDO:0017977)","secondary_identifiers":["Orphanet:325632"],"synonyms":[{"name":"46,XY DSD of gynecological interest","type":"exact"}],"termid":"MONDO:0017977","xrefs":{"Monarch":{"xref_id":"0017977"}}}


id: PBO:0085506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S10, no bacterial homolog; RPS10A has a paralog, RPS10B, that arose from the whole genome duplication; mutations in the human homolog associated with Diamond-Blackfan anemia","termid":"PBO:0085506"}


id: PBO:0033753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_proteolysis","termid":"PBO:0033753"}


id: PBO:0082490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I); phosphorylates both RNA pol II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and ribosomal protein Rps2p to increase translational fidelity; required for H3K36 trimethylation but not dimethylation by Set2p; suggested stimulatory role in 80S formation during translation initiation; similar to the Drosophila dCDK12 and human CDK12 and probably CDK13","termid":"PBO:0082490"}


id: PBO:0070959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 14","termid":"PBO:0070959"}


id: PBO:0077168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tousled like kinase 1 pseudogene 1","termid":"PBO:0077168"}


id: GO:0090644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An innate immune response that is positively correlated with host plant development. As a plant develops, its innate resistance to pathogenic infections increases. The mechanisms involved in age-related resistance differ in nature or in aspects of regulation from the hypersensitive response (HR), systemic acquired resistance (SAR), or induced systemic resistance (ISR).","definition_xrefs":["PMID:19694953","PMID:17635216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"age-related resistance","synonyms":[{"name":"ARR","type":"exact"},{"name":"adult seedling resistance","type":"narrow"},{"name":"developmental resistance","type":"broad"},{"name":"flowering-induced resistance","type":"narrow"},{"name":"mature seedling resistance","type":"narrow"},{"name":"ontogenic resistance","type":"broad"},{"name":"senescence-induced resistance","type":"narrow"}],"termid":"GO:0090644"}


id: PR:Q9UTC4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- reg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTC4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C227.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.15","synonyms":[{"name":"Spom972h-reg1","type":"exact"}],"termid":"PR:Q9UTC4"}


id: GO:0002009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of epithelia are generated and organized. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube.","definition_xrefs":["GOC:jl","GOC:tb","ISBN:0198506732","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"epithelium development","termid":"GO:0060429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelium","synonyms":[{"name":"epithelium morphogenesis","type":"exact"}],"termid":"GO:0002009"}


id: GO:0038143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex between the tyrosine kinase receptor ERBB2 and a ligand-activated receptor ERBB3. ERBB2, which does not bind any known ligand, is activated through formation of a heterodimer with another ligand-activated ERBB family member such as ERBB3.","definition_xrefs":["PMID:8665853","PMID:16460914","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"ERBB3:ERBB2 complex","synonyms":[{"name":"EGFR:ERBB2 heterodimer","type":"narrow"},{"name":"NRG1/2:ERBB3:ERBB2","type":"narrow"}],"termid":"GO:0038143"}


id: PBO:0002741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Srp14","termid":"PBO:0002741"}


id: GO:1900111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K9 dimethylation.","definition_xrefs":["GOC:TermGenie","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K9 dimethylation (obsolete GO:1900111)","synonyms":[{"name":"activation of histone H3 K9 dimethylation","type":"narrow"},{"name":"activation of histone H3-K9 dimethylation","type":"narrow"},{"name":"activation of histone lysine H3 K9 dimethylation","type":"narrow"},{"name":"positive regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"positive regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"up regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"up regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"up regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"up-regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"up-regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"up-regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"upregulation of histone H3 K9 dimethylation","type":"exact"},{"name":"upregulation of histone H3-K9 dimethylation","type":"exact"},{"name":"upregulation of histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:1900111"}


id: PBO:0064137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2 pseudogene 4","termid":"PBO:0064137"}


id: GO:0023062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via transcytosis. Transcytosis is the directed movement of endocytosed material through the cell and its exocytosis from the plasma membrane at the opposite side.","definition_xrefs":["ISBN:0716731363","GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via transcytosis (obsolete GO:0023062)","synonyms":[{"name":"signal transmission via transcytosis","type":"exact"}],"termid":"GO:0023062"}


id: PBO:0028312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_protein_coding_gene","termid":"PBO:0028312"}


id: MONDO:0002955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow growing, locally infiltrating carcinoma that arises from the vulva. It is characterized by the presence of malignant cells that resemble the basal cells that are present in the epidermis.","definition_xrefs":["NCIT:C6381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"},{"relation_name":"is_a","term_name":"vulvar squamous cell carcinoma","termid":"MONDO:0024609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"vulva basal cell carcinoma","secondary_identifiers":["Orphanet:494451","SCTID:717731002","UMLS:C1336977","GARD:22006","icd11.foundation:247568702","DOID:4301","MEDGEN:234481"],"synonyms":[{"name":"basal cell carcinoma of the vulva","type":"exact"},{"name":"basal cell carcinoma of vulva","type":"exact"},{"name":"mammalian vulva skin basal cell carcinoma","type":"exact"},{"name":"skin basal cell carcinoma of mammalian vulva","type":"exact"},{"name":"vulvar basal cell cancer","type":"exact"},{"name":"vulvar basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002955","xrefs":{"Monarch":{"xref_id":"0002955"}}}


id: GO:0034300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm.","definition_xrefs":["PMID:32839172","GOC:ds","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporangiospore formation","termid":"GO:0034300"}


id: GO:0019927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to tryptophyl quinone to form 4'-(S-L-cysteinyl)-L-tryptophyl quinone, a cofactor found at the active site of amine dehydrogenase.","definition_xrefs":["RESID:AA0313","PDB:1JJU","PMID:11717396","PMID:11555656"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 4'-(S-L-cysteinyl)-L-tryptophyl quinone (obsolete GO:0019927)","termid":"GO:0019927"}


id: SO:0000009
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000009 gene_class (obsolete SO:0000009)","termid":"SO:0000009"}


id: MONDO:0008966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cholestasis-lymphedema syndrome is a rare genetic disorder characterized by neonatal intrahepatic cholestasis, often lessening and becoming intermittent with age, and severe chronic lymphedema which mainly affects the lower limbs. Patients often present with fat malabsorption leading to failure to thrive, fat soluble vitamin deficiency with bleeding, rickets, and neuropathy. In 25% of cases, cirrhosis occurs during childhood or later in life.","definition_xrefs":["Orphanet:1414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046","MONDO:0002515"],"is_obsolete":false,"name":"Aagenaes syndrome","secondary_identifiers":["ICD9:576.8","OMIM:214900","UMLS:C0268314","DOID:6691","ICD10CM:Q82.0","GARD:370","SCTID:28724005","NCIT:C35709","MEDGEN:78658","MESH:C535330"],"synonyms":[{"name":"Aagenaes syndrome","type":"exact"},{"name":"Chls","type":"related"},{"name":"LCS","type":"related"},{"name":"LCS1","type":"related"},{"name":"cholestasis lymphedema syndrome","type":"related"},{"name":"cholestasis-edema syndrome, Norwegian type","type":"exact"},{"name":"cholestasis-lymphedema syndrome","type":"related"},{"name":"lymphedema cholestasis syndrome","type":"related"},{"name":"lymphedema-cholestasis syndrome","type":"related"}],"termid":"MONDO:0008966","xrefs":{"Monarch":{"xref_id":"0008966"}}}


id: MOD:01204
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Artifact -","definition_xrefs":["Unimod:526","PubMed:9004526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prompt loss of methanethiol from oxidixed methionine","synonyms":[{"name":"Dethiomethyl","type":"related"},{"name":"Prompt loss of side chain from oxidised Met","type":"related"}],"termid":"MOD:01204"}


id: GO:0090121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly into constituent parts of the low-density lipoprotein particle in the lysosome that contributes to cholesterol transport.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low-density lipoprotein particle disassembly","termid":"GO:0090495"},{"relation_name":"part_of","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle disassembly involved in cholesterol transport","termid":"GO:0090121"}


id: MONDO:0043327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discharge of cerebrospinal fluid through a hole through the skull bone most commonly draining from the nose (CEREBROSPINAL FLUID RHINORRHEA) or the ear (CEREBROSPINAL FLUID OTORRHEA).","definition_xrefs":["MESH:D065634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrospinal fluid leak","secondary_identifiers":["UMLS:C0023182","SCTID:230744007","MEDGEN:9695"],"synonyms":[{"name":"CSF leak","type":"related"},{"name":"CSF otorrhea","type":"related"},{"name":"CSF rhinorrhea","type":"related"},{"name":"Drainages, cerebrospinal fluid","type":"related"},{"name":"Leakages, cerebrospinal fluid","type":"related"},{"name":"Leaks, cerebrospinal fluid","type":"related"},{"name":"cerebrospinal fluid Drainages","type":"related"},{"name":"cerebrospinal fluid Leakages","type":"related"},{"name":"cerebrospinal fluid Leaks","type":"related"},{"name":"cerebrospinal fluid drainage","type":"related"},{"name":"cerebrospinal fluid drainage, post traumatic","type":"related"},{"name":"cerebrospinal fluid drainage, post-traumatic","type":"related"},{"name":"cerebrospinal fluid drainage, spontaneous","type":"related"},{"name":"cerebrospinal fluid drainage, traumatic","type":"related"},{"name":"cerebrospinal fluid leak","type":"exact"},{"name":"cerebrospinal fluid leak, post traumatic","type":"related"},{"name":"cerebrospinal fluid leak, post-traumatic","type":"related"},{"name":"cerebrospinal fluid leak, spontaneous","type":"related"},{"name":"cerebrospinal fluid leak, traumatic","type":"related"},{"name":"cerebrospinal fluid leakage","type":"related"},{"name":"cerebrospinal fluid leakage, post traumatic","type":"related"},{"name":"cerebrospinal fluid leakage, post-traumatic","type":"related"},{"name":"cerebrospinal fluid leakage, spontaneous","type":"related"},{"name":"cerebrospinal fluid leakage, traumatic","type":"related"},{"name":"csf - cerebrospinal fluid leak","type":"related"},{"name":"drainage, cerebrospinal fluid","type":"related"},{"name":"fluid Drainages, cerebrospinal","type":"related"},{"name":"fluid Leakages, cerebrospinal","type":"related"},{"name":"fluid Leaks, cerebrospinal","type":"related"},{"name":"fluid drainage, cerebrospinal","type":"related"},{"name":"fluid leak, cerebrospinal","type":"related"},{"name":"fluid leakage, cerebrospinal","type":"related"},{"name":"leak, cerebrospinal fluid","type":"related"},{"name":"leakage, cerebrospinal fluid","type":"related"},{"name":"spinal CSF leak","type":"related"},{"name":"spinal cerebrospinal fluid leak","type":"related"},{"name":"spinal cerebrospinal fluid leak, post traumatic","type":"related"},{"name":"spinal cerebrospinal fluid leak, post-traumatic","type":"related"},{"name":"spinal cerebrospinal fluid leak, spontaneous","type":"related"},{"name":"spinal cerebrospinal fluid leak, traumatic","type":"related"}],"termid":"MONDO:0043327","xrefs":{"Monarch":{"xref_id":"0043327"}}}


id: PBO:0064365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMIS2 transmembrane protein","termid":"PBO:0064365"}


id: MONDO:0018596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic polyarteritis nodosa (PAN) is a chronic systemic necrotizingvasculitis of adults and childrenaffecting small- and medium-sized vessels and characterized by formation of microaneurysms leading to serious generalized disease and multi-organ involvement.","definition_xrefs":["Orphanet:439762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary polyarteritis nodosa","termid":"MONDO:0018593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic polyarteritis nodosa","secondary_identifiers":["GARD:21833","MEDGEN:1863875","UMLS:C5848156"],"synonyms":[{"name":"systemic PAN","type":"exact"},{"name":"systemic periarteritis nodosa","type":"exact"}],"termid":"MONDO:0018596","xrefs":{"Monarch":{"xref_id":"0018596"}}}


id: GO:0099065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of spine apparatus membrane (obsolete GO:0099065)","termid":"GO:0099065"}


id: GO:0017130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sequence of cytosine residues in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-pyrimidine tract binding","termid":"GO:0008187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"poly(C) RNA binding","synonyms":[{"name":"poly(C) binding","type":"broad"},{"name":"poly(rC) binding","type":"exact"}],"termid":"GO:0017130"}


id: GO:0090701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of a plant organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"plant organ formation","termid":"GO:1905393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of plant organ identity","termid":"GO:0090701"}


id: PBO:0083445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ALA1/YOR335C","termid":"PBO:0083445"}


id: PBO:0056316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K2 divergent transcript","termid":"PBO:0056316"}


id: GO:0042339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving keratan sulfate proteoglycans, which have glycosaminoglycan repeat units consisting of beta-1,4-linked D-galactopyranosyl-beta-(1,4)-N-acetyl-D-glucosamine 6-sulfate and with variable amounts of fucose, sialic acid and mannose units; keratan sulfate chains are covalently linked by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylose to peptidyl-threonine or serine residues.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"keratan sulfate proteoglycan metabolic process","secondary_identifiers":["Reactome:R-HSA-1638074"],"synonyms":[{"name":"keratan sulfate metabolism","type":"exact"},{"name":"keratan sulphate metabolic process","type":"exact"},{"name":"keratan sulphate metabolism","type":"exact"}],"termid":"GO:0042339"}


id: GO:0047139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: homocystine + 2 reduced glutathione = oxidized glutathione + 2 homocysteine.","definition_xrefs":["EC:1.8.4.1","MetaCyc:1.8.4.1-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutathione-homocystine transhydrogenase activity","secondary_identifiers":["RHEA:11464"],"synonyms":[{"name":"glutathione:homocystine oxidoreductase activity","type":"related"}],"termid":"GO:0047139"}


id: MONDO:0021489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the sweat gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sweat gland neoplasm","termid":"MONDO:0002381"},{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign neoplasm of sweat gland","secondary_identifiers":["UMLS:C0684354","MEDGEN:146888","NCIT:C4879","SCTID:92422009"],"synonyms":[{"name":"benign neoplasm of the sweat gland","type":"exact"},{"name":"benign sweat gland neoplasm","type":"exact"},{"name":"benign sweat gland tumor","type":"exact"},{"name":"benign sweat gland tumour","type":"exact"},{"name":"benign tumor of sweat gland","type":"exact"},{"name":"benign tumor of the sweat gland","type":"exact"},{"name":"benign tumour of sweat gland","type":"exact"},{"name":"benign tumour of the sweat gland","type":"exact"},{"name":"sweat gland benign neoplasm","type":"exact"},{"name":"sweat gland neoplasm, benign","type":"exact"}],"termid":"MONDO:0021489","xrefs":{"Monarch":{"xref_id":"0021489"}}}


id: PBO:0075145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 1","termid":"PBO:0075145"}


id: PBO:0063428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 2","termid":"PBO:0063428"}


id: GO:0008553
data:
  {"annotated_genes":["SJAG_01669","SJAG_04167","SJAG_01129","SJAG_04258"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70377,72988,77665],"is_not":false,"summary":null,"term":"GO:0008553"},{"annotations":[112143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"}]},"cv_name":"molecular_function","definition":"Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle.","definition_xrefs":["RHEA:20852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01129":null,"SJAG_01669":null,"SJAG_04167":null,"SJAG_04258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"P-type proton-exporting transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.6.3.6-RXN","GO:0036442","EC:7.1.2.1"],"synonyms":[{"name":"H+-exporting ATPase activity","type":"related"},{"name":"H+-transporting ATPase","type":"broad"},{"name":"H+-transporting ATPase activity","type":"broad"},{"name":"P-type H+-exporting ATPase activity","type":"broad"},{"name":"hydrogen exporting ATPase activity, phosphorylative mechanism","type":"exact"},{"name":"hydrogen-/sodium-translocating ATPase activity","type":"related"},{"name":"hydrogen-exporting ATPase activity","type":"broad"},{"name":"hydrogen-exporting ATPase activity, phosphorylative mechanism","type":"related"},{"name":"proton transport ATPase activity","type":"related"},{"name":"proton-exporting ATPase activity","type":"broad"},{"name":"proton-exporting ATPase activity, phosphorylative mechanism","type":"related"},{"name":"proton-translocating ATPase activity","type":"related"},{"name":"proton-transporting ATPase activity","type":"exact"}],"termid":"GO:0008553","terms_by_termid":{"GO:0008553":null,"GO:0008900":null}}


id: PBO:0072804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senescence associated long non-coding RNA 3","termid":"PBO:0072804"}


id: PBO:0036343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related GC kinase Ppk11","termid":"PBO:0036343"}


id: _global:exists_during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","direct_ancestors":[{"relation_name":"is_a","term_name":"during","termid":"_global:during"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exists_during","secondary_identifiers":["GOREL:0000032"],"synonyms":[{"name":"during","type":"broad"}],"termid":"_global:exists_during"}


id: PBO:0071522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 25","termid":"PBO:0071522"}


id: PBO:0083363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene SIR2/YDL042C","termid":"PBO:0083363"}


id: PBO:0015708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H3-K20 methyltransferase Set9","termid":"PBO:0015708"}


id: MONDO:0100430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liver disease characterized by the presence of excessive fibrous connective tissue in the liver.","definition_xrefs":["PMID:31722201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"fibrotic liver disease","synonyms":[{"name":"hepatic fibrosis (disease)","type":"exact"},{"name":"liver fibrosis (disease)","type":"exact"}],"termid":"MONDO:0100430","xrefs":{"Monarch":{"xref_id":"0100430"}}}


id: GO:0030547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a signaling receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor regulator activity","termid":"GO:0030545"},{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0098772"],"is_obsolete":false,"name":"signaling receptor inhibitor activity","synonyms":[{"name":"receptor inhibitor activity","type":"broad"}],"termid":"GO:0030547"}


id: MONDO:0013042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atypical hemolytic uremic syndrome with complement gene abnormality","termid":"MONDO:0035290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"atypical hemolytic-uremic syndrome with B factor anomaly","secondary_identifiers":["MEDGEN:416691","Orphanet:93578","OMIM:612924","UMLS:C2752038","GARD:18554"],"synonyms":[{"name":"AHUS4","type":"related"},{"name":"D-HUS with B factor anomaly","type":"exact"},{"name":"aHUS with B factor anomaly","type":"exact"},{"name":"aHUS, susceptibility to, 4","type":"related"},{"name":"aHUS4","type":"related"},{"name":"atypical HUS with B factor anomaly","type":"exact"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, 4","type":"related"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, type 4","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhea with B factor anomaly","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhoea with B factor anomaly","type":"exact"},{"name":"susceptibility to atypical hemolytic uremic syndrome 4","type":"related"}],"termid":"MONDO:0013042","xrefs":{"Monarch":{"xref_id":"0013042"}}}


id: PR:O60090
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl3 gene.","definition_xrefs":["UniProtKB:O60090","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT family member C14C8.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.09c","synonyms":[{"name":"Spom972h-dbl3","type":"exact"}],"termid":"PR:O60090"}


id: PBO:0070571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 37","termid":"PBO:0070571"}


id: GO:0009949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the establishment of polarity along the anterior/posterior axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"anterior/posterior axis specification","termid":"GO:0009948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polarity specification of anterior/posterior axis","termid":"GO:0009949"}


id: PBO:0074441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 42","termid":"PBO:0074441"}


id: MONDO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vaginal enterocele (obsolete MONDO:0001589)","secondary_identifiers":["ICD9:618.6","MESH:D006547","DOID:1283","SCTID:398061002"],"synonyms":[{"name":"enterocele","type":"broad"},{"name":"vaginal hernia","type":"related"}],"termid":"MONDO:0001589","xrefs":{"Monarch":{"xref_id":"0001589"}}}


id: MONDO:1010233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, non-human animal","secondary_identifiers":["OMIA:000487"],"termid":"MONDO:1010233","xrefs":{"Monarch":{"xref_id":"1010233"}}}


id: MONDO:0019198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sympathetic ophthalmia (SO) is a bilateral granulomatous anterior uveitis usually occurring within the three months following trauma or a surgical procedure involving one eye.","definition_xrefs":["Orphanet:79098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panuveitis","termid":"MONDO:0017255"},{"relation_name":"is_a","term_name":"non-infectious anterior uveitis","termid":"MONDO:0017634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"sympathetic ophthalmia","secondary_identifiers":["GARD:18939","SCTID:75315001","ICD9:360.11","UMLS:C0029077","EFO:1001205","icd11.foundation:1639718137","DOID:12029","MedDRA:10042742","MEDGEN:45203","MESH:D009879"],"synonyms":[{"name":"sympathetic ophthalmia","type":"exact"},{"name":"sympathetic uveitis","type":"exact"}],"termid":"MONDO:0019198","xrefs":{"Monarch":{"xref_id":"0019198"}}}


id: PBO:0000583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron ion transporter (predicted)","termid":"PBO:0000583"}


id: PBO:0034259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_growth_of","termid":"PBO:0034259"}


id: GO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"RNA polymerase IV is a multisubunit RNA polymerase complex found in the nucleus of plants and involved in accumulation of siRNAs and in DNA methylation-dependent silencing of endogenous repeated sequences. Pol IV is composed of subunits that are paralogous or identical to the 12 subunits of Pol II. The largest and second-largest subunits of Pol IV are the catalytic subunits and share similarity with the corresponding subunits of other eukaryotic and bacterial multisubunit RNA polymerases. The second largest subunit is also found in RNA polymerase V, while the largest subunit is found only in RNAP IV complex.","definition_xrefs":["GOC:mtg_sensu","PMID:15692015","PMID:16140984","PMID:15766525","PMID:19110459","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase IV complex","secondary_identifiers":["GO:0000420"],"synonyms":[{"name":"DNA-directed RNA polymerase IV complex","type":"exact"},{"name":"DNA-directed RNA polymerase IVa complex","type":"exact"}],"termid":"GO:0000418"}


id: PBO:0073008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 8","termid":"PBO:0073008"}


id: GO:0102370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: lupeol + NADPH(4-) + O2 + H+ = betulin + NADP(3-) + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete lupeol 28-monooxygenase activity (obsolete GO:0102370)","termid":"GO:0102370"}


id: MONDO:0000765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete corneal stromal dystrophy (obsolete MONDO:0000765)","termid":"MONDO:0000765","xrefs":{"Monarch":{"xref_id":"0000765"}}}


id: MONDO:0022113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central centrifugal cicatricial alopecia","secondary_identifiers":["MEDGEN:698033","SCTID:109441000119102","UMLS:C1274708","GARD:10826","ICD9:704.09","OMIM:618352"],"synonyms":[{"name":"CCCA","type":"related"},{"name":"CENTRAL CENTRIFUGAL CICATRICIAL ALOPECIA","type":"related"},{"name":"central centrifugal alopecia","type":"related"},{"name":"central centrifugal cicatricial alopecia","type":"exact"},{"name":"hot comb alopecia","type":"related"}],"termid":"MONDO:0022113","xrefs":{"Monarch":{"xref_id":"0022113"}}}


id: GO:0031854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an orexigenic neuropeptide QRFP receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"orexigenic neuropeptide QRFP receptor binding","synonyms":[{"name":"orexigenic neuropeptide QRFP receptor ligand","type":"narrow"}],"termid":"GO:0031854"}


id: PBO:0070195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 119 pseudogene","termid":"PBO:0070195"}


id: GO:0090340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of secretion of lysosomal enzymes, the controlled release of lysosomal enzymes by a cell.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of secretion of lysosomal enzymes","termid":"GO:0090182"},{"relation_name":"positively_regulates","term_name":"secretion of lysosomal enzymes","termid":"GO:0033299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of secretion of lysosomal enzymes","termid":"GO:0090340"}


id: PBO:0087338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specificity factor required for Rsp5p-dependent ubiquitination; also required for sorting of specific cargo proteins at the multivesicular body; mRNA is targeted to the bud via the mRNA transport system involving She2p","termid":"PBO:0087338"}


id: PATO:0001812
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A relaxation which is relatively low.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001812 decreased relaxation (obsolete PATO:0001812)","synonyms":[{"name":"low relaxation","type":"exact"}],"termid":"PATO:0001812"}


id: PBO:0057940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3665","termid":"PBO:0057940"}


id: MONDO:0002037
data:
  {"annotated_genes":["SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008259"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the pleura. Representative examples include pleural infection, pleural mesothelioma, and pleural solitary fibrous tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lower respiratory tract disorder","termid":"MONDO:0000270"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02231":null},"genotype_count":0,"is_obsolete":false,"name":"pleural disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0032226","DOID:1532","MEDGEN:10804","MESH:D010995","NCIT:C26859","ICD9:518.89","SCTID:88075009"],"synonyms":[{"name":"disease of pleura","type":"exact"},{"name":"disease or disorder of pleura","type":"exact"},{"name":"disorder of pleura","type":"exact"},{"name":"non-neoplastic pleural disease","type":"narrow"},{"name":"pleura disease","type":"exact"},{"name":"pleura disease or disorder","type":"exact"},{"name":"pleural disorder","type":"exact"},{"name":"pleural disorders","type":"exact"}],"termid":"MONDO:0002037","terms_by_termid":{"MONDO:0008259":null},"xrefs":{"Monarch":{"xref_id":"0002037"}}}


id: GO:1905505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of motile cilium assembly.","definition_xrefs":["GO_REF:0000058","GOC:cilia","GOC:TermGenie","GOC:krc","PMID:25294941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cilium assembly","termid":"GO:0045724"},{"relation_name":"is_a","term_name":"regulation of motile cilium assembly","termid":"GO:1905503"},{"relation_name":"positively_regulates","term_name":"motile cilium assembly","termid":"GO:0044458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of motile cilium assembly","synonyms":[{"name":"activation of motile primary cilia assembly","type":"narrow"},{"name":"activation of motile primary cilia formation","type":"narrow"},{"name":"activation of motile primary cilium assembly","type":"narrow"},{"name":"activation of motile primary cilium formation","type":"narrow"},{"name":"activation of nodal cilium assembly","type":"related"},{"name":"activation of nodal cilium formation","type":"related"},{"name":"positive regulation of motile primary cilia assembly","type":"related"},{"name":"positive regulation of motile primary cilia formation","type":"related"},{"name":"positive regulation of motile primary cilium assembly","type":"related"},{"name":"positive regulation of motile primary cilium formation","type":"related"},{"name":"positive regulation of nodal cilium assembly","type":"related"},{"name":"positive regulation of nodal cilium formation","type":"related"},{"name":"up regulation of motile primary cilia assembly","type":"related"},{"name":"up regulation of motile primary cilia formation","type":"related"},{"name":"up regulation of motile primary cilium assembly","type":"related"},{"name":"up regulation of motile primary cilium formation","type":"related"},{"name":"up regulation of nodal cilium assembly","type":"related"},{"name":"up regulation of nodal cilium formation","type":"related"},{"name":"up-regulation of motile primary cilia assembly","type":"related"},{"name":"up-regulation of motile primary cilia formation","type":"related"},{"name":"up-regulation of motile primary cilium assembly","type":"related"},{"name":"up-regulation of motile primary cilium formation","type":"related"},{"name":"up-regulation of nodal cilium assembly","type":"related"},{"name":"up-regulation of nodal cilium formation","type":"related"},{"name":"upregulation of motile primary cilia assembly","type":"related"},{"name":"upregulation of motile primary cilia formation","type":"related"},{"name":"upregulation of motile primary cilium assembly","type":"related"},{"name":"upregulation of motile primary cilium formation","type":"related"},{"name":"upregulation of nodal cilium assembly","type":"related"},{"name":"upregulation of nodal cilium formation","type":"related"}],"termid":"GO:1905505"}


id: GO:0050145
data:
  {"annotated_genes":["SJAG_03798","SJAG_00779","SJAG_02038","SJAG_04849"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71810,71717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004017"},{"annotations":[75711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004385"},{"annotations":[80222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033862"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a ribonucleoside 5'-phosphate + ATP = a ribonucleoside 5'-diphosphate + ADP.","definition_xrefs":["RHEA:24036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_02038":null,"SJAG_03798":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"nucleoside monophosphate kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9754978","Reactome:R-HSA-73548","Reactome:R-HSA-75126","Reactome:R-HSA-73635","Reactome:R-HSA-75125","EC:2.7.4.4","MetaCyc:NUCLEOSIDE-PHOSPHATE-KINASE-RXN","GO:0019201","Reactome:R-HSA-2162092","Reactome:R-HSA-6788798","Reactome:R-HSA-6788810"],"synonyms":[{"name":"ATP:nucleoside-phosphate phosphotransferase activity","type":"related"},{"name":"NMP-kinase activity","type":"related"},{"name":"nucleoside-phosphate kinase activity","type":"exact"},{"name":"nucleotide kinase activity","type":"related"}],"termid":"GO:0050145","terms_by_termid":{"GO:0004017":null,"GO:0004385":null,"GO:0033862":null}}


id: MONDO:0700182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Erythroleukemia that occurs in a cat.","definition_xrefs":["NCIT:C134770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline erythroleukemia","termid":"MONDO:0700182","xrefs":{"Monarch":{"xref_id":"0700182"}}}


id: PBO:0060394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 2B","termid":"PBO:0060394"}


id: PBO:0087419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 8 of ubiquinol cytochrome-c reductase (Complex III); Complex III is a component of the mitochondrial inner membrane electron transport chain; oriented facing the intermembrane space; expression is regulated by Abf1p and Cpf1p","termid":"PBO:0087419"}


id: PBO:0075433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member B1","termid":"PBO:0075433"}


id: MONDO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the apocrine sweat gland.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"apocrine sweat gland disorder","termid":"MONDO:0024467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hidradenitis","secondary_identifiers":["ICD9:705.83","NCIT:C32132","SCTID:69741000","UMLS:C0085160","MESH:D016575","MEDGEN:43115","DOID:2282"],"synonyms":[{"name":"Hydradenitis","type":"exact"},{"name":"apocrine sweat gland","type":"exact"},{"name":"apocrine sweat gland inflammation","type":"exact"},{"name":"inflammation of apocrine sweat gland","type":"exact"}],"termid":"MONDO:0002260","xrefs":{"Monarch":{"xref_id":"0002260"}}}


id: PBO:0026661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_inositol_starvation","termid":"PBO:0026661"}


id: MONDO:0006370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pineoblastoma (obsolete MONDO:0006370)","termid":"MONDO:0006370","xrefs":{"Monarch":{"xref_id":"0006370"}}}


id: PBO:0061701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 pseudogene 1","termid":"PBO:0061701"}


id: GO:0035553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Removal of the methyl group from one or more nucleotides within a single-stranded RNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:18775698"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidative single-stranded RNA demethylation (obsolete GO:0035553)","synonyms":[{"name":"oxidative ssRNA demethylation","type":"exact"}],"termid":"GO:0035553"}


id: PBO:0087497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Elongator complex; binds to microtubules via conserved alkaline residues; has two seven-bladed WD40 &#946; propellers; Elongator complex is required for modification of wobble nucleosides in tRNA; target of Kluyveromyces lactis zymocin","termid":"PBO:0087497"}


id: PBO:0031897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster assembly protein Nfu1 (predicted)","termid":"PBO:0031897"}


id: PATO:0001964
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled spirally downwards.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circinate","termid":"PATO:0001964"}


id: GO:0070529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group from L-tryptophan to an acceptor, usually a 2-oxo acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"L-tryptophan aminotransferase activity","termid":"GO:0070529"}


id: GO:0009984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: substrate + ATP = substrate-AMP + diphosphate.","definition_xrefs":["PMID:12084835"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate forming enzyme activity (obsolete GO:0009984)","synonyms":[{"name":"adenylate forming enzyme activity","type":"exact"}],"termid":"GO:0009984"}


id: GO:2000972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of detection of glucose.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of detection of glucose","termid":"GO:2000970"},{"relation_name":"positively_regulates","term_name":"detection of glucose","termid":"GO:0051594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of detection of glucose","synonyms":[{"name":"positive regulation of glucose detection","type":"exact"},{"name":"positive regulation of glucose perception","type":"related"},{"name":"positive regulation of glucose sensing","type":"related"}],"termid":"GO:2000972"}


id: MONDO:1012130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin A deficiency, non-human animal","termid":"MONDO:1011726"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin A deficiency, dog","secondary_identifiers":["OMIA:000552-9615"],"termid":"MONDO:1012130","xrefs":{"Monarch":{"xref_id":"1012130"}}}


id: GO:0010556
data:
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process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:35226668":null},"termid":"GO:0010556","terms_by_termid":{"GO:0000122":null,"GO:0000183":null,"GO:0000184":null,"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0000294":null,"GO:0000381":null,"GO:0000956":null,"GO:0006355":null,"GO:0006356":null,"GO:0006357":null,"GO:0006359":null,"GO:0006402":null,"GO:0006449":null,"GO:0010468":null,"GO:0010621":null,"GO:0010628":null,"GO:0010629":null,"GO:0010964":null,"GO:0016441":null,"GO:0016480":null,"GO:0030422":null,"GO:0030466":null,"GO:0031047":null,"GO:0031048":null,"GO:0031087":null,"GO:0031445":null,"GO:0031453":null,"GO:0031507":null,"GO:0031508":null,"GO:0031509":null,"GO:0032210":null,"GO:0032786":null,"GO:0032951":null,"GO:0032968":null,"GO:0033562":null,"GO:0033621":null,"GO:0033696":null,"GO:0034244":null,"GO:0036450":null,"GO:0040029":null,"GO:0043488":null,"GO:0043628":null,"GO:0045719":null,"GO:0045814":null,"GO:0045815":null,"GO:0045892":null,"GO:0045899":null,"GO:0045901":null,"GO:0045905":null,"GO:0045943":null,"GO:0045944":null,"GO:0045948":null,"GO:0048024":null,"GO:0048026":null,"GO:0048255":null,"GO:0060195":null,"GO:0060211":null,"GO:0060212":null,"GO:0060213":null,"GO:0060261":null,"GO:0060906":null,"GO:0060963":null,"GO:0061013":null,"GO:0061157":null,"GO:0061158":null,"GO:0061188":null,"GO:0070131":null,"GO:0070134":null,"GO:0070478":null,"GO:0070481":null,"GO:0070610":null,"GO:0070935":null,"GO:0070966":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0071042":null,"GO:0071044":null,"GO:0090052":null,"GO:0090053":null,"GO:0090055":null,"GO:0090334":null,"GO:0090669":null,"GO:0120271":null,"GO:0120272":null,"GO:0140018":null,"GO:0140462":null,"GO:0140718":null,"GO:0140719":null,"GO:0140727":null,"GO:0140748":null,"GO:0141005":null,"GO:0141014":null,"GO:0141194":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null,"GO:1904332":null,"GO:1904595":null,"GO:1904689":null,"GO:1905744":null,"GO:1905746":null,"GO:1990074":null,"GO:1990431":null,"GO:1990432":null,"GO:1990611":null,"GO:1990625":null,"GO:1990983":null,"GO:2000234":null,"GO:2000765":null,"GO:2000766":null,"GO:2000767":null,"GO:2000815":null,"GO:2001125":null}}


id: PBO:0003509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidic acid phosphatase (predicted)","termid":"PBO:0003509"}


id: PBO:0108959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_deletion_and_mutation","termid":"PBO:0108959"}


id: FYPO:0000828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which entry into the G1 phase of the mitotic cell cycle (exit from mitosis) begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1 phase progression","termid":"FYPO:0000602"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"premature mitotic G1 phase entry","synonyms":[{"name":"accelerated entry into G1","type":"related"},{"name":"advanced mitotic G1 phase entry","type":"exact"},{"name":"advanced mitotic G1 progression","type":"related"},{"name":"mitotic cell cycle advance in G1","type":"related"},{"name":"premature G1 phase entry during mitotic cell cycle","type":"exact"},{"name":"premature exit from mitosis","type":"exact"},{"name":"premature mitotic G1 phase entry during vegetative growth","type":"exact"}],"termid":"FYPO:0000828"}


id: SO:0000332
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Coding region of sequence similarity by descent from a common ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_conserved_region","synonyms":[{"name":"coding conserved region","type":"exact"}],"termid":"SO:0000332"}


id: _global:exemplar_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is exemplar of Y if X is the best evidence for Y.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exemplar_of","termid":"_global:exemplar_of"}


id: GO:0042331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to light.","definition_xrefs":["ISBN:0192800981","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phototaxis","secondary_identifiers":["GO:0046953","Wikipedia:Phototaxis"],"synonyms":[{"name":"phototactic behavior","type":"exact"},{"name":"phototactic behaviour","type":"exact"},{"name":"taxis in response to light","type":"exact"}],"termid":"GO:0042331"}


id: PBO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L11 (predicted)","termid":"PBO:0000323"}


id: PBO:0085024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nit protein; one of two proteins in S. cerevisiae with similarity to the Nit domain of NitFhit from fly and worm and to the mouse and human Nit protein which interacts with the Fhit tumor suppressor; nitrilase superfamily member","termid":"PBO:0085024"}


id: PBO:0029420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_palmitoylation","termid":"PBO:0029420"}


id: PBO:0002053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-14 family","termid":"PBO:0002053"}


id: GO:0045781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell budding","termid":"GO:0007116"},{"relation_name":"is_a","term_name":"negative regulation of cell division","termid":"GO:0051782"},{"relation_name":"is_a","term_name":"negative regulation of asexual reproduction","termid":"GO:1903665"},{"relation_name":"negatively_regulates","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell budding","synonyms":[{"name":"down regulation of cell budding","type":"exact"},{"name":"down-regulation of cell budding","type":"exact"},{"name":"downregulation of cell budding","type":"exact"},{"name":"inhibition of cell budding","type":"narrow"},{"name":"negative regulation of budding","type":"broad"}],"termid":"GO:0045781"}


id: PBO:0063489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1","termid":"PBO:0063489"}


id: FYPO:0006044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form mitotic spindle microtubules that are longer than normal, and the protruding kinetochore microtubules are surrounded by an extension of the nuclear envelope, with the kinetochore-attached end at the distal tip of the protrusion.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"},{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"long mitotic spindle","termid":"FYPO:0000733"},{"relation_name":"is_a","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0002403","FYPO:0000002","FYPO:0001985","FYPO:0002399","FYPO:0000120"],"is_obsolete":false,"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion","synonyms":[{"name":"elongated mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion","type":"exact"},{"name":"elongated mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion during M-phase","type":"exact"},{"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope deformation","type":"related"},{"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion during mitotic cell cycle","type":"related"},{"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion during vegetative growth","type":"exact"},{"name":"long mitotic spindle microtubules with nuclear envelope protrusion from the kinetochore attached end of the microtubule","type":"exact"},{"name":"nuclear envelope protrusion with long mitotic kinetochore microtubules and kinetochore at tip of nuclear envelope protrusion","type":"exact"}],"termid":"FYPO:0006044"}


id: PBO:0031816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_autophagy","termid":"PBO:0031816"}


id: GO:0044382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a CLRC complex is transported to, or maintained in, heterochromatin. CLRC complex is an active cullin-dependent E3 ubiquitin ligase complex essential for heterochromatin assembly by RNAi and histone H3K9 methylation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein localization to heterochromatin","termid":"GO:0097355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"CLRC complex localization to heterochromatin","synonyms":[{"name":"CLRC ubiquitin ligase complex localisation to heterochromatin","type":"exact"},{"name":"CLRC ubiquitin ligase complex localization to heterochromatin","type":"exact"}],"termid":"GO:0044382"}


id: PBO:0072947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 27","termid":"PBO:0072947"}


id: FYECO:0000117
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119415],"is_not":false,"summary":null,"term":"FYECO:0000117"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Cells are initially grown at a normal growth temperature. This is followed by a heat shock where the temperature is increased to a very high temperature followed by recovery at the initial temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping heat shock","termid":"FYECO:0000116"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"is_obsolete":false,"name":"heat shock and recovery at normal temperature","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"heat shock for 20-30 min at 48 degrees C, preceeded and followed by growth at normal temperature","type":"narrow"}],"termid":"FYECO:0000117","terms_by_termid":{"FYECO:0000117":null}}


id: SO:0000896
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is translationally regulated.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"translationally_regulated","termid":"SO:0000131"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally_regulated_gene","synonyms":[{"name":"translationally regulated gene","type":"exact"}],"termid":"SO:0000896"}


id: PR:Q92399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerases I, II, and III subunit RPABC3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10917:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerases I, II, and III subunit RPABC3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.12","secondary_identifiers":["UniProtKB:Q92399"],"synonyms":[{"name":"DNA-directed RNA polymerases I, II, and III 14.5 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerases I, II, and III subunit ABC3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC14C8.12","type":"related"},{"name":"Spom972h-POLR2H","type":"exact"}],"termid":"PR:Q92399"}


id: PBO:0056397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein RP/EB family member 2","termid":"PBO:0056397"}


id: MONDO:0004211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine tumor that arises from the gastrointestinal tract and produces glucagon-like peptides. Morphologically, it is characterized by the presence of neoplastic cells forming tubular or trabecular patterns.","definition_xrefs":["NCIT:C27448"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete gastrointestinal neuroendocrine benign tumor (obsolete MONDO:0002891)","termid":"MONDO:0002891"},{"relation_name":"is_a","term_name":"digestive system neuroendocrine tumor, grade 1/2","termid":"MONDO:0000386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"L-cell glucagon-like peptide-producing neuroendocrine tumor","secondary_identifiers":["ICDO:8152/1","DOID:7402","UMLS:C3274140","MEDGEN:475773"],"synonyms":[{"name":"L-cell glucagon-like peptide producing tumor","type":"related"},{"name":"L-cell glucagon-like peptide producing tumour","type":"related"},{"name":"L-cell glucagon-like peptide-producing NET","type":"exact"},{"name":"L-cell glucagon-like peptide-producing neuroendocrine tumor","type":"exact"}],"termid":"MONDO:0004211","xrefs":{"Monarch":{"xref_id":"0004211"}}}


id: GO:0070295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which water is taken up from the collecting ducts and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal water transport","termid":"GO:0003097"},{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"renal water absorption","synonyms":[{"name":"nephron water absorption","type":"exact"},{"name":"renal water reabsorption","type":"exact"}],"termid":"GO:0070295"}


id: PBO:0004743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, DUF1674 family","termid":"PBO:0004743"}


id: MONDO:0015447
data:
  {"annotated_genes":["SJAG_01970","SJAG_04067","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87097,87098,85655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"Differentiated thyroid carcinoma (DTC), also known as papillary or follicular thyroid carcinoma, is a slow-growing malignancy usually presenting in adults as an asymptomatic thyroid mass.","definition_xrefs":["Orphanet:146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"differentiated thyroid carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12027","DOID:0080525","MEDGEN:277876","NCIT:C7153","ONCOTREE:WDTC","UMLS:C1337013","EFO:1002017"],"synonyms":[{"name":"differentiated thyroid cancer","type":"exact"},{"name":"differentiated thyroid carcinoma","type":"exact"},{"name":"differentiated thyroid gland cancer","type":"exact"},{"name":"differentiated thyroid gland carcinoma","type":"exact"},{"name":"papillary or follicular thyroid carcinoma","type":"exact"},{"name":"thyroid gland differentiated carcinoma","type":"exact"},{"name":"thyroid gland well differentiated carcinoma","type":"exact"},{"name":"well differentiated thyroid carcinoma","type":"exact"},{"name":"well differentiated thyroid gland carcinoma","type":"exact"},{"name":"well-differentiated thyroid cancer","type":"exact"},{"name":"well-differentiated thyroid carcinoma","type":"exact"}],"termid":"MONDO:0015447","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0015447"}}}


id: GO:0015774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of polysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transport","termid":"GO:0008643"},{"relation_name":"part_of","term_name":"polysaccharide localization","termid":"GO:0033037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"polysaccharide transport","termid":"GO:0015774"}


id: GO:0098868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a bone that contributes to the shaping of that bone.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ growth","termid":"GO:0035265"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone growth","termid":"GO:0098868"}


id: MONDO:0000012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete choreoathetosis (obsolete MONDO:0000012)","synonyms":[{"name":"obsolete choreoathetosis (disease)","type":"exact"}],"termid":"MONDO:0000012","xrefs":{"Monarch":{"xref_id":"0000012"}}}


id: PBO:0027941
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_upon_glucose_starvation","termid":"PBO:0027941"}


id: MONDO:0043346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive transformation of germinal centers is a condition in which a lymph node becomes very enlarged (lymphadenopathy). Typically, only one lymph node is affected, though PTGC can involve multiple lymph nodes. Theneck is the most common location of affected lymph nodes, but PTGC may also affect lymph nodes in the groin and armpits. adults are more frequently affected than children, but children have a higher chance of developing PTGC multiple times (recurrence). PTGC is not considered a precancerous condition, though it has been associated with Hodgkin lymphoma.","definition_xrefs":["GARD:0010712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"progressive transformation of germinal centers","secondary_identifiers":["GARD:10712","MESH:C548085","UMLS:C1514481","NCIT:C38408","MEDGEN:271018"],"synonyms":[{"name":"PTGC","type":"related"},{"name":"progressive transformation of Germinal centers","type":"exact"},{"name":"progressive transformation of Germinal centres","type":"exact"}],"termid":"MONDO:0043346","xrefs":{"Monarch":{"xref_id":"0043346"}}}


id: PBO:0030004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_with_more_or_fewer_than_four_spores","termid":"PBO:0030004"}


id: SO:0002373
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for scaRNA possessing a box H/ACA sequence motif, guiding the pseudouridylation of snRNAs.","definition_xrefs":["PMID:24659245","PMID:17099227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA_gene","termid":"SO:0002339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_ACA_box_scaRNA_gene","synonyms":[{"name":"H/ACA scaRNA gene","type":"exact"}],"termid":"SO:0002373"}


id: GO:0102045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-chlorobenzoate + O2 + a reduced electron acceptor = 3-chlorobenzoate-cis-3,4-diol + an oxidized electron acceptor.","definition_xrefs":["PMID:8285670","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-chlorobenzoate-3,4-oxygenase activity","secondary_identifiers":["MetaCyc:RXN-10422"],"termid":"GO:0102045"}


id: PBO:0039738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein H","termid":"PBO:0039738"}


id: MONDO:0014635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the RBP4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 10","secondary_identifiers":["MEDGEN:909133","UMLS:C4225330","OMIM:616428","GARD:16110"],"synonyms":[{"name":"MCOPCB10","type":"related"},{"name":"RBP4 microphthalmia, isolated, with coloboma","type":"exact"},{"name":"microphthalmia, isolated, with coloboma 10","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in RBP4","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 10","type":"exact"}],"termid":"MONDO:0014635","xrefs":{"Monarch":{"xref_id":"0014635"}}}


id: GO:0008356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The asymmetric division of cells to produce two daughter cells with different developmental potentials. It is of fundamental significance for the generation of cell diversity.","definition_xrefs":["PMID:11672519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric cell division","secondary_identifiers":["Wikipedia:Asymmetric_cell_division"],"synonyms":[{"name":"asymmetric cytokinesis","type":"related"},{"name":"asymmetrical cell division","type":"exact"},{"name":"asymmetrical cytokinesis","type":"related"}],"termid":"GO:0008356"}


id: MONDO:1012065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"autosomal dwarfism, non-human animal","termid":"MONDO:1011942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dwarfism, chicken","secondary_identifiers":["OMIA:000303-9031"],"termid":"MONDO:1012065","xrefs":{"Monarch":{"xref_id":"1012065"}}}


id: MONDO:0971058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare bacterial infectious disease characterized by development of endothelial cell-derived, blood-filled tumors on the surface of the skin during the chronic phase of infection with Bartonella bacilliformis. The lesions can persist for months to years and may cause pain and scarring due to ulceration. They are classified as miliary (multiple red papules of <3 mm in diameter), mular (blood-filled nodules), and diffuse (groups of subdermal nodules >5 mm in diameter). Eruptions may be accompanied by fever and malaise, lymphadenopathy, acute bone and joint pains, and headache. Fatality rates during this phase are low.","definition_xrefs":["Orphanet:659759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Oroya fever","termid":"MONDO:0018984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"verruga peruana","secondary_identifiers":["UMLS:C0042552","MEDGEN:21848"],"termid":"MONDO:0971058","xrefs":{"Monarch":{"xref_id":"0971058"}}}


id: GO:0021649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the vestibulocochlear nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:cls","ISBN:0838580343","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve morphogenesis","termid":"GO:0021648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve structural organization","synonyms":[{"name":"CN VII structural organization","type":"related"},{"name":"vestibulocochlear nerve structural organisation","type":"exact"}],"termid":"GO:0021649"}


id: MONDO:0010451
data:
  {"annotated_genes":["SJAG_02422"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86688],"is_not":false,"summary":null,"term":"MONDO:0010451"}]},"cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the GDI1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02422":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 41","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:854647","GARD:22689","UMLS:C3887939","OMIM:300849","DOID:0112058"],"synonyms":[{"name":"GDI1 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX41","type":"related"},{"name":"intellectual developmental disorder, X-linked 41, X-linked dominant","type":"exact"},{"name":"intellectual disability, X-linked 41","type":"exact"},{"name":"intellectual disability, X-linked 48","type":"related"},{"name":"intellectual disability, X-linked type 41","type":"exact"},{"name":"mental retardation, X-linked 41","type":"related"},{"name":"mental retardation, X-linked 48","type":"related"},{"name":"mental retardation, X-linked type 41","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in GDI1","type":"exact"}],"termid":"MONDO:0010451","terms_by_termid":{"MONDO:0010451":null},"xrefs":{"Monarch":{"xref_id":"0010451"}}}


id: PBO:0034788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic centromere-SPB clustering protein Csi1","termid":"PBO:0034788"}


id: MONDO:0032868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lessel-kubisch syndrome","secondary_identifiers":["MEDGEN:1684750","OMIM:618681","UMLS:C5231460"],"synonyms":[{"name":"LESSEL-KUBISCH SYNDROME","type":"related"},{"name":"LSKB","type":"related"}],"termid":"MONDO:0032868","xrefs":{"Monarch":{"xref_id":"0032868"}}}


id: PBO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR48 family Bun107","termid":"PBO:0000346"}


id: PR:P0CS86
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CS86"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein C1348.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.01","synonyms":[{"name":"Spom972h-SPBC1348.01","type":"exact"}],"termid":"PR:P0CS86"}


id: MONDO:0018510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation that arises from the small intestine. It includes well differentiated neuroendocrine tumors (low and intermediate grade) and poorly differentiated neuroendocrine carcinomas (high grade).","definition_xrefs":["NCIT:C5803"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"small intestine cancer","termid":"MONDO:0000956"},{"relation_name":"is_a","term_name":"intestinal neuroendocrine neoplasm","termid":"MONDO:0002883"},{"relation_name":"is_a","term_name":"small intestine neoplasm","termid":"MONDO:0004251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"small intestine neuroendocrine neoplasm","secondary_identifiers":["MEDGEN:233453","EFO:1001928","UMLS:C1336005","Orphanet:423975","GARD:21765","DOID:4434"],"synonyms":[{"name":"NET of the small intestine","type":"exact"},{"name":"neuroendocrine neoplasm of small intestine","type":"exact"},{"name":"neuroendocrine neoplasm of the small intestine","type":"exact"},{"name":"neuroendocrine tumor of small bowel","type":"exact"},{"name":"neuroendocrine tumor of the small intestine","type":"related"},{"name":"neuroendocrine tumour of small bowel","type":"exact"},{"name":"neuroendocrine tumour of the small intestine","type":"related"},{"name":"small intestinal neuroendocrine neoplasm","type":"exact"},{"name":"small intestine NET","type":"exact"},{"name":"small intestine neuroendocrine neoplasm","type":"exact"},{"name":"small intestine neuroendocrine tumor","type":"exact"},{"name":"small intestine neuroendocrine tumor, well differentiated, low or intermediate grade","type":"related"},{"name":"small intestine neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0018510","xrefs":{"Monarch":{"xref_id":"0018510"}}}


id: MONDO:0010073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondyloepiphyseal dysplasia tarda, Kohn type is characterized by short trunk dwarfism, progressive involvement of the spine and epiphyses and mild-to-moderate intellectual deficit.","definition_xrefs":["Orphanet:163665"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia tarda","termid":"MONDO:0019667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia tarda, Kohn type","secondary_identifiers":["GARD:16995","MEDGEN:338603","UMLS:C1849053","DOID:0112292","SCTID:719202006","MESH:C564796","icd11.foundation:758715188","OMIM:271620"],"synonyms":[{"name":"Sedt with intellectual disability","type":"related"},{"name":"Sedt with mental retardation","type":"related"},{"name":"spondyloepiphyseal dysplasia tarda with intellectual disability","type":"related"},{"name":"spondyloepiphyseal dysplasia tarda with mental retardation","type":"related"}],"termid":"MONDO:0010073","xrefs":{"Monarch":{"xref_id":"0010073"}}}


id: MONDO:0004151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the meninx of spinal cord.","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"malignant tumor of meninges","termid":"MONDO:0021322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spinal meninges cancer","secondary_identifiers":["ICD9:192.3","MEDGEN:509351","NCIT:C194412","SCTID:363476006","UMLS:C0153647","DOID:7224"],"synonyms":[{"name":"cancer of meninx of spinal cord","type":"exact"},{"name":"malignant meninx of spinal cord neoplasm","type":"exact"},{"name":"malignant neoplasm of meninx of spinal cord","type":"exact"},{"name":"malignant neoplasm of spinal meninges","type":"exact"},{"name":"meninx of spinal cord cancer","type":"exact"}],"termid":"MONDO:0004151","xrefs":{"Monarch":{"xref_id":"0004151"}}}


id: GO:0032542
data:
  {"annotated_genes":["SJAG_04125"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76629],"is_not":false,"summary":null,"term":"GO:0032542"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peroxiredoxin-(S-hydroxy-S-oxocysteine) + ATP + 2 R-SH = peroxiredoxin-(S-hydroxycysteine) + ADP + phosphate + R-S-S-R.","definition_xrefs":["EC:1.8.98.2","PMID:16102934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfiredoxin activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:17545","Reactome:R-HSA-9760094","MetaCyc:1.8.98.2-RXN"],"synonyms":[{"name":"Srx1","type":"related"},{"name":"peroxiredoxin-(S-hydroxy-S-oxocysteine) reductase activity","type":"exact"},{"name":"peroxiredoxin-(S-hydroxy-S-oxocysteine):thiol oxidoreductase [ATP-hydrolysing; peroxiredoxin-(S-hydroxycysteine)-forming]","type":"related"},{"name":"sulphiredoxin activity","type":"exact"}],"termid":"GO:0032542","terms_by_termid":{"GO:0032542":null}}


id: PBO:0004768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Vti1 (predicted)","termid":"PBO:0004768"}


id: FYPO:0007776
data:
  {"alleles_by_uniquename":{"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119032,119067,119070,119315,119327,119331,119336,119339,119411],"is_not":false,"summary":null,"term":"FYPO:0007776"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which hyphae are shorter than normal.","definition_xrefs":["PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00610":null,"SJAG_02013":null,"SJAG_02527":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":9,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"SJAG_00124delta":{"display_name":"SJAG_00124delta","display_uniquename":"SJAG_00124delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00124:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007773"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0007773","FYPO:0000002"],"is_obsolete":false,"name":"decreased hyphal length","references_by_uniquename":{"PMID:31150379":null,"PMID:34198697":null,"PMID:36058798":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02013","SJAG_00124","SJAG_04697","SJAG_00610","SJAG_04551","SJAG_02527"],"single_locus_genotype_uniquenames":["pyp1delta","SJAG_00124delta","pck2delta","pmk1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","gms1delta"],"synonyms":[{"name":"short hyphae","type":"exact"}],"termid":"FYPO:0007776","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0007776":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0004013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of embryonal rhabdomyosarcoma arising from the vagina. It is characterized by the formation of a cambium layer in the affected tissue and polypoid nodules with an abundant myxoid stroma. It occurs in female adults.","definition_xrefs":["NCIT:C40267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"botryoid-type embryonal rhabdomyosarcoma of the vagina","termid":"MONDO:0003994"},{"relation_name":"is_a","term_name":"adult botryoid rhabdomyosarcoma","termid":"MONDO:0004012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult vagina botryoid embryonal rhabdomyosarcoma","secondary_identifiers":["DOID:6848","MEDGEN:272994","UMLS:C1515893"],"synonyms":[{"name":"adult botryoid-type embryonal rhabdomyosarcoma of the vagina","type":"exact"},{"name":"adult sarcoma Botryoides of the vagina","type":"exact"},{"name":"adult vagina botryoid rhabdomyosarcoma","type":"related"},{"name":"botryoid-type embryonal rhabdomyosarcoma of the vagina of adults","type":"exact"}],"termid":"MONDO:0004013","xrefs":{"Monarch":{"xref_id":"0004013"}}}


id: PBO:0080142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasodilator stimulated phosphoprotein","termid":"PBO:0080142"}


id: PBO:0117127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNTB1 antisense RNA 2","termid":"PBO:0117127"}


id: MONDO:0013984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the OTOGL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 84B","secondary_identifiers":["GARD:22647","UMLS:C3554159","OMIM:614944","DOID:0110530","MEDGEN:767073"],"synonyms":[{"name":"DFNB84B","type":"narrow"},{"name":"OTOGL autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 84B","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 84B","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in OTOGL","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 84B","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 84B","type":"exact"},{"name":"deafness, autosomal recessive 84B","type":"narrow"},{"name":"deafness, autosomal recessive 84b","type":"narrow"},{"name":"deafness, autosomal recessive type 84B","type":"narrow"}],"termid":"MONDO:0013984","xrefs":{"Monarch":{"xref_id":"0013984"}}}


id: PBO:0053512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 500","termid":"PBO:0053512"}


id: PBO:0080874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YOD1 deubiquitinase","termid":"PBO:0080874"}


id: PATO:0002439
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular shape quality inhering in a bearer by virtue of the bearer's having two angles in its length giving the bearer the form of the letter W.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angular","termid":"PATO:0001977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"w-shaped","termid":"PATO:0002439"}


id: PBO:0029766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_double-strand_break_site","termid":"PBO:0029766"}


id: PBO:0062713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily J member 1","termid":"PBO:0062713"}


id: PBO:0042722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein B","termid":"PBO:0042722"}


id: GO:0106434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reactions involved in isomerization of all trans to all cis retnal.","definition_xrefs":["PMID:21447403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal metabolic process","termid":"GO:0042574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"retinal isomerization","termid":"GO:0106434"}


id: PBO:0091210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large subunit ribosomal RNA","termid":"PBO:0091210"}


id: PBO:0069666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 943, pseudogene","termid":"PBO:0069666"}


id: MONDO:0800409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular fibrillation during myocardial infarction, susceptibility to","secondary_identifiers":["UMLS:C4017668","MEDGEN:866105"],"termid":"MONDO:0800409","xrefs":{"Monarch":{"xref_id":"0800409"}}}


id: GO:0140975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of a cellular component of another organism, leading to damage or temporary subversion of that structure. In some cases this can cause malfunctioning of the cells and death of the target organism.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of cellular anatomical structure in another organism","synonyms":[{"name":"disruption of cellular component of another organism","type":"broad"}],"termid":"GO:0140975"}


id: GO:0002294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive CD4-positive, alpha-beta T cell acquires the specialized features of an effector, regulatory, or memory T cell as part of an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation involved in immune response","termid":"GO:0002293"},{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell differentiation involved in immune response","synonyms":[{"name":"CD4-positive, alpha-beta T cell development involved in immune response","type":"related"},{"name":"CD4-positive, alpha-beta T cell differentiation during immune response","type":"related"},{"name":"CD4-positive, alpha-beta T lymphocyte differentiation during immune response","type":"related"},{"name":"CD4-positive, alpha-beta T-cell differentiation during immune response","type":"related"},{"name":"CD4-positive, alpha-beta T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002294"}


id: MONDO:0014368
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86227],"is_not":false,"summary":null,"term":"MONDO:0014368"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial melanoma","termid":"MONDO:0018961"},{"relation_name":"excluded_subClassOf","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"is_obsolete":false,"name":"tumor predisposition syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18582","MEDGEN:862913","OMIM:615848","OMIM:616568","UMLS:C4014476"],"synonyms":[{"name":"CMM10","type":"exact"},{"name":"GLM9","type":"exact"},{"name":"glioma susceptibility 9","type":"exact"},{"name":"glioma susceptibility type 9","type":"exact"},{"name":"malignant glioma caused by mutation in POT1","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 10","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, type 10","type":"exact"},{"name":"susceptibility to cutaneous malignant melanoma 10","type":"exact"}],"termid":"MONDO:0014368","terms_by_termid":{"MONDO:0014368":null},"xrefs":{"Monarch":{"xref_id":"0014368"}}}


id: PBO:0064748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 84","termid":"PBO:0064748"}


id: GO:0010969
data:
  {"annotated_genes":["SJAG_00990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pheromone-dependent signal transduction during conjugation with cellular fusion, a signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation with cellular fusion.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060238"},{"relation_name":"regulates","term_name":"pheromone-dependent signal transduction involved in conjugation with cellular fusion","termid":"GO:0000750"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0000747"],"is_obsolete":false,"name":"regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010969","terms_by_termid":{"GO:0090029":null}}


id: MONDO:0003421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma characterized by the presence of a mixed epithelial cell population.","definition_xrefs":["NCIT:C4157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed cell adenoma","secondary_identifiers":["DOID:5385","MEDGEN:83131","UMLS:C0334323","ICDO:8323/0"],"synonyms":[{"name":"mixed cell adenoma","type":"exact"}],"termid":"MONDO:0003421","xrefs":{"Monarch":{"xref_id":"0003421"}}}


id: GO:0016415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of an octanoyl (CH3-[CH2]6-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete octanoyltransferase activity (obsolete GO:0016415)","termid":"GO:0016415"}


id: PBO:0049491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.B variant histone 1","termid":"PBO:0049491"}


id: GO:1902626
data:
  {"annotated_genes":["SJAG_04395","SJAG_01420","SJAG_02952","SJAG_04492","SJAG_00882","SJAG_04004","SJAG_04940","SJAG_02508","SJAG_00949","SJAG_01606","SJAG_00722","SJAG_03466","SJAG_03458","SJAG_04669","SJAG_01454","SJAG_02759","SJAG_00689","SJAG_04108","SJAG_03080","SJAG_01811","SJAG_01839","SJAG_02830","SJAG_03012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79140,89412,92182,92603,93009,97775,98981,100203,100395,100535,102316,103301,105802,107232,108803,110602,111236,111933,112692,115569,115570,116442,118694],"is_not":false,"summary":null,"term":"GO:1902626"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the large subunit precursor of the preribosome.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","GOC:di","PMID:22735702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"ribosomal large subunit assembly","termid":"GO:0000027"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00689":null,"SJAG_00722":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02508":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_04004":null,"SJAG_04108":null,"SJAG_04395":null,"SJAG_04492":null,"SJAG_04669":null,"SJAG_04940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003","GO:0042254"],"is_obsolete":false,"name":"assembly of large subunit precursor of preribosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"66S preribosome assembly","type":"narrow"},{"name":"66S preribosome formation","type":"narrow"},{"name":"preribosome, large subunit precursor formation","type":"exact"}],"termid":"GO:1902626","terms_by_termid":{"GO:1902626":null}}


id: GO:0030647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an aminoglycoside antibiotic, any member of a group of broad spectrum antibiotics, of similar toxicity and pharmacology, that contain an aminodeoxysugar, an amino- or guanidino-substituted inositol ring, and one or more residues of other sugars. The group includes streptomycin, neomycin, framycetin, kanamycin, paromomycin, and gentamicin.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycoside antibiotic metabolic process","synonyms":[{"name":"aminoglycoside antibiotic metabolism","type":"exact"}],"termid":"GO:0030647"}


id: PBO:0044989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 40 pseudogene 1","termid":"PBO:0044989"}


id: MONDO:0010838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital disorder characterized by the complete absence of gonadal tissue.","definition_xrefs":["NCIT:C27228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonadal agenesis","secondary_identifiers":["OMIM:600171","MEDGEN:181797","UMLS:C0949331"],"synonyms":[{"name":"gonadal agenesis","type":"exact"}],"termid":"MONDO:0010838","xrefs":{"Monarch":{"xref_id":"0010838"}}}


id: PBO:0091421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NTPase Obg family, human OLA1 ortholog, implicated in mitochondrial translation, ribosome assembly, or tRNA metabolism","termid":"PBO:0091421"}


id: MONDO:0004702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The presence of whitish patches on the mucosal surface of the cervix. Histologic examination reveals hyperkeratosis. In a minority of cases, underlying dysplasia or carcinoma in situ is present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"},{"relation_name":"is_a","term_name":"leukoplakia","termid":"MONDO:0043243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine cervix leukoplakia","secondary_identifiers":["SCTID:50923006","MEDGEN:124350","DOID:9043","ICD10CM:N88.0","ICD9:622.2","NCIT:C3976","UMLS:C0269194"],"synonyms":[{"name":"cervical leukoplakia","type":"exact"},{"name":"cervix leukoplakia","type":"exact"},{"name":"cervix uteri leukoplakia","type":"exact"},{"name":"leukoplakia of cervix","type":"exact"},{"name":"leukoplakia of cervix (uteri)","type":"exact"},{"name":"leukoplakia of cervix uteri","type":"exact"},{"name":"leukoplakia of the cervix","type":"exact"},{"name":"leukoplakia of the cervix uteri","type":"exact"},{"name":"leukoplakia of the uterine cervix","type":"exact"},{"name":"leukoplakia of uterine cervix","type":"exact"}],"termid":"MONDO:0004702","xrefs":{"Monarch":{"xref_id":"0004702"}}}


id: MONDO:0012951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 8","secondary_identifiers":["MEDGEN:436446","OMIM:612589","UMLS:C2675483"],"synonyms":[{"name":"CRCS8","type":"exact"},{"name":"colorectal cancer, susceptibility to, 8","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 14Q","type":"related"}],"termid":"MONDO:0012951","xrefs":{"Monarch":{"xref_id":"0012951"}}}


id: PBO:0063197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 19","termid":"PBO:0063197"}


id: MONDO:0958330
data:
  {"annotated_genes":["SJAG_02060"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86951],"is_not":false,"summary":null,"term":"MONDO:0958330"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02060":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 113","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5935597","MEDGEN:1859161","OMIM:620772"],"termid":"MONDO:0958330","terms_by_termid":{"MONDO:0958330":null},"xrefs":{"Monarch":{"xref_id":"0958330"}}}


id: MONDO:0006566
data:
  {"annotated_genes":["SJAG_02488","SJAG_02698","SJAG_01474","SJAG_01878","SJAG_03349","SJAG_03352","SJAG_01938","SJAG_05011","SJAG_04865","SJAG_00580","SJAG_04565","SJAG_03158","SJAG_04167","SJAG_00104"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007048"},{"annotations":[85325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"},{"annotations":[85817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014131"},{"annotations":[85530,85531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009440"},{"annotations":[84830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"},{"annotations":[86532,86530,86531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008416"},{"annotations":[86897,86898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008293"},{"annotations":[85946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013868"},{"annotations":[85808,85809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014713"}]},"cv_name":"mondo","definition":"A skin disorder consisting of hypertrophy of the stratum corneum of the skin.","definition_xrefs":["NCIT:C34745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"keratinization disease","termid":"MONDO:0045011"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00580":null,"SJAG_01474":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02488":null,"SJAG_02698":null,"SJAG_03158":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_04167":null,"SJAG_04565":null,"SJAG_04865":null,"SJAG_05011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:9625","MESH:D007642","SCTID:254666005","DOID:161","UMLS:C0022593","EFO:1000720"],"synonyms":[{"name":"keratoderma","type":"exact"}],"termid":"MONDO:0006566","terms_by_termid":{"MONDO:0007048":null,"MONDO:0007858":null,"MONDO:0008293":null,"MONDO:0008416":null,"MONDO:0009440":null,"MONDO:0013868":null,"MONDO:0014131":null,"MONDO:0014713":null,"MONDO:0033014":null},"xrefs":{"Monarch":{"xref_id":"0006566"}}}


id: PBO:0074851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 38D","termid":"PBO:0074851"}


id: GO:1903893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the ATF6-mediated unfolded protein response.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:TermGenie","GOC:PARL","PMID:22013210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900103"},{"relation_name":"is_a","term_name":"regulation of ATF6-mediated unfolded protein response","termid":"GO:1903891"},{"relation_name":"positively_regulates","term_name":"ATF6-mediated unfolded protein response","termid":"GO:0036500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ATF6-mediated unfolded protein response","synonyms":[{"name":"activation of ATF6 branch of UPR","type":"narrow"},{"name":"activation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"activation of ATF6-alpha UPR branch","type":"narrow"},{"name":"activation of ATF6-beta UPR branch","type":"narrow"},{"name":"activation of ATF6-mediated unfolded protein response","type":"narrow"},{"name":"activation of UPR signaling by ATF6 stress sensor","type":"narrow"},{"name":"activation of activating transcription factor 6 signaling in unfolded protein response","type":"narrow"},{"name":"activation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"narrow"},{"name":"positive regulation of ATF6 branch of UPR","type":"exact"},{"name":"positive regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"positive regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"positive regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"positive regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"positive regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"up regulation of ATF6 branch of UPR","type":"exact"},{"name":"up regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"up regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"up regulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"up regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"up regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"up regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"up-regulation of ATF6 branch of UPR","type":"exact"},{"name":"up-regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up-regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"up-regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"up-regulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"up-regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"up-regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"upregulation of ATF6 branch of UPR","type":"exact"},{"name":"upregulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"upregulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"upregulation of ATF6-beta UPR branch","type":"narrow"},{"name":"upregulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"upregulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"upregulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"upregulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:1903893"}


id: PBO:0018108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi to ER protein (predicted)","termid":"PBO:0018108"}


id: PBO:0043760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10","termid":"PBO:0043760"}


id: PBO:0052801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 41, pseudogene","termid":"PBO:0052801"}


id: FYPO:0003464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is lower than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased alpha,alpha-trehalase activity during cellular response to heat","synonyms":[{"name":"decreased neutral trehalase activity during cellular response to heat","type":"exact"},{"name":"decreased trehalase activity during cellular response to heat","type":"broad"},{"name":"reduced alpha,alpha-trehalase activity during cellular response to heat","type":"exact"}],"termid":"FYPO:0003464"}


id: MONDO:0044624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pediatric collagenous gastritis","secondary_identifiers":["UMLS:C5680109","Orphanet:487809","GARD:21998","MEDGEN:1805938"],"synonyms":[{"name":"childhood-onset collagenous gastritis","type":"exact"}],"termid":"MONDO:0044624","xrefs":{"Monarch":{"xref_id":"0044624"}}}


id: FYPO:0002442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to cell division site","synonyms":[{"name":"normal protein localisation to cell division site","type":"exact"},{"name":"normal protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell division site during vegetative growth","type":"exact"},{"name":"normal protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0002442"}


id: PBO:0074710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74B","termid":"PBO:0074710"}


id: GO:1902391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of N-terminal peptidyl-serine acetylation.","definition_xrefs":["GOC:TermGenie","PMID:23912279"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of N-terminal peptidyl-serine acetylation (obsolete GO:1902391)","synonyms":[{"name":"activation of N-terminal peptidyl-serine acetylation","type":"narrow"},{"name":"up regulation of N-terminal peptidyl-serine acetylation","type":"exact"},{"name":"up-regulation of N-terminal peptidyl-serine acetylation","type":"exact"},{"name":"upregulation of N-terminal peptidyl-serine acetylation","type":"exact"}],"termid":"GO:1902391"}


id: PBO:0060964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFU1 iron-sulfur cluster scaffold pseudogene 1","termid":"PBO:0060964"}


id: PBO:0005096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH family RNA binding protein Mmi1","termid":"PBO:0005096"}


id: PBO:0042459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 123","termid":"PBO:0042459"}


id: PBO:0089593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC complex-Argonaute linker protein Stc1","termid":"PBO:0089593"}


id: MONDO:0000705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection of the colon secondary to infection with Clostridium difficile bacteria. This infection generally results from the loss of normal gut flora secondary to recent antibiotic use, and manifests as copious watery stools, with associated abdominal pain and myalgia. C. difficile is the most common cause of pseudomembranous colitis, and can progress to toxic megacolon if left untreated.","definition_xrefs":["NCIT:C35286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"infectious colitis","termid":"MONDO:0006039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"Clostridium difficile colitis","secondary_identifiers":["MESH:D004761","UMLS:C0238106","DOID:0060185","MEDGEN:65946","MedDRA:10009657","SCTID:423590009"],"synonyms":[{"name":"C. diff colitis","type":"exact"},{"name":"C. diff infection","type":"exact"},{"name":"Clostridioides difficile caused colitis (disease)","type":"exact"},{"name":"Clostridioides difficile colitis (disease)","type":"exact"},{"name":"Clostridium difficile infection","type":"exact"},{"name":"pseudomembranous colitis","type":"exact"}],"termid":"MONDO:0000705","xrefs":{"Monarch":{"xref_id":"0000705"}}}


id: FYPO:0005222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of histone H3 to chromatin at one or more protein-coding genes is decreased.","definition_xrefs":["PMID:23028377","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3 localization to chromatin at protein coding gene","synonyms":[{"name":"decreased histone H3 localisation to chromatin at protein coding gene","type":"exact"},{"name":"decreased histone H3 localization to chromatin at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3 localization to chromatin at protein-coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3 localization to chromatin at protein coding gene","type":"exact"}],"termid":"FYPO:0005222"}


id: GO:0015248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of sterols into, out of or within a cell, or between cells. Sterol are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol transporter activity (obsolete GO:0015248)","termid":"GO:0015248"}


id: PBO:0027661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0027661"}


id: MONDO:0002993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine tumor arising from the delta cells of the pancreas. It is characterized by inappropriate secretion of somatostatin and associated with diabetes mellitus, hypochlorhydria, gallbladder disease, diarrhea, steatorrhea, anemia, and weight loss.","definition_xrefs":["NCIT:C95595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic delta cell neuroendocrine tumor","termid":"MONDO:0002994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic somatostatinoma","secondary_identifiers":["DOID:4432","MEDGEN:235079","UMLS:C1368041"],"synonyms":[{"name":"pancreatic delta cell somatostatin producing neoplasm","type":"exact"},{"name":"pancreatic somatostatin cell tumor","type":"exact"},{"name":"pancreatic somatostatin cell tumour","type":"exact"}],"termid":"MONDO:0002993","xrefs":{"Monarch":{"xref_id":"0002993"}}}


id: GO:1905014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 'de novo' NAD biosynthetic process from L-tryptophan.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of L-tryptophan metabolic process","termid":"GO:0090358"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide biosynthetic process","termid":"GO:1900373"},{"relation_name":"is_a","term_name":"positive regulation of NAD metabolic process","termid":"GO:1902690"},{"relation_name":"is_a","term_name":"regulation of 'de novo' NAD biosynthetic process from L-tryptophan","termid":"GO:1905012"},{"relation_name":"positively_regulates","term_name":"'de novo' NAD biosynthetic process from L-tryptophan","termid":"GO:0034354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"positive regulation of 'de novo' NAD biosynthetic process from L-tryptophan","synonyms":[{"name":"activation of 'de novo' NAD biosynthetic process from tryptophan","type":"narrow"},{"name":"activation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"positive regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"broad"},{"name":"positive regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"up regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"up regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"up-regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"up-regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"upregulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"upregulation of de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:1905014"}


id: MONDO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"idiopathic progressive polyneuropathy","secondary_identifiers":["ICD9:356.4","MEDGEN:509646","SCTID:33209009","UMLS:C0154756","DOID:10593"],"termid":"MONDO:0001073","xrefs":{"Monarch":{"xref_id":"0001073"}}}


id: PBO:0045233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 1","termid":"PBO:0045233"}


id: GO:0009409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cold","synonyms":[{"name":"freezing tolerance","type":"related"}],"termid":"GO:0009409"}


id: PBO:0066803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 102","termid":"PBO:0066803"}


id: PBO:0086689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; includes a potential transmembrane domain; deletion results in slightly lengthened telomeres; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0086689"}


id: PBO:0089804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase AMPK (gamma) subunit Cbs2","termid":"PBO:0089804"}


id: PBO:0088424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor beta subunit Srp102","termid":"PBO:0088424"}


id: FYPO:0002042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to iron ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to iron ion starvation","termid":"FYPO:0003196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to iron ion starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to iron ion starvation","type":"related"},{"name":"decreased RNA level during cellular response to iron ion depletion","type":"exact"},{"name":"decreased RNA level during cellular response to iron ion deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to iron starvation","type":"exact"},{"name":"decreased RNA level during iron ion starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to iron ion starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to iron ion starvation","type":"exact"},{"name":"reduced RNA level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0002042"}


id: PBO:0081179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zymogen granule protein 16","termid":"PBO:0081179"}


id: MONDO:0014574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peeling skin-leukonuchia-acral punctate keratoses-cheilitis-knuckle pads syndrome","secondary_identifiers":["UMLS:C4225381","OMIM:616295","Orphanet:444138","MEDGEN:902464","DOID:0070526","GARD:17764"],"synonyms":[{"name":"peeling skin with leukonychia, acral punctate keratoses, cheilitis, and knuckle pads","type":"related"},{"name":"peeling skin-leukonychia-acral punctate keratoses-cheilitis-knuckle pads syndrome","type":"related"},{"name":"plack","type":"related"},{"name":"plack syndrome","type":"exact"}],"termid":"MONDO:0014574","xrefs":{"Monarch":{"xref_id":"0014574"}}}


id: MONDO:0024323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of the glomus tumor with architectural features similar to solid glomus tumor. It is characterized by the presence of elongated glomus cells which resemble mature smooth muscle.","definition_xrefs":["NCIT:C4223"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign perivascular tumor","termid":"MONDO:0003342"},{"relation_name":"is_a","term_name":"glomus tumor","termid":"MONDO:0018327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomangiomyoma","secondary_identifiers":["MEDGEN:87240","ICDO:8713/0","UMLS:C0334422","DOID:8020"],"synonyms":[{"name":"glomangiomyoma","type":"exact"}],"termid":"MONDO:0024323","xrefs":{"Monarch":{"xref_id":"0024323"}}}


id: PBO:0057314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518a-2","termid":"PBO:0057314"}


id: PBO:0070817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 47","termid":"PBO:0070817"}


id: GO:0048456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the stamen. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ structural organization","termid":"GO:0048450"},{"relation_name":"part_of","term_name":"stamen morphogenesis","termid":"GO:0048448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen structural organization","secondary_identifiers":["GO:0048428"],"synonyms":[{"name":"stamen structural organisation","type":"exact"}],"termid":"GO:0048456"}


id: PBO:0067188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 250, pseudogene","termid":"PBO:0067188"}


id: PBO:0072011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 13","termid":"PBO:0072011"}


id: GO:0047419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-D-galactosamine 6-phosphate = acetate + D-galactosamine 6-phosphate.","definition_xrefs":["RHEA:18149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0016810","GO:0019213","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"N-acetylgalactosamine-6-phosphate deacetylase activity","secondary_identifiers":["MetaCyc:3.5.1.80-RXN"],"termid":"GO:0047419"}


id: PBO:0034356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homeosis_relationship_with","termid":"PBO:0034356"}


id: GO:0031002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure consisting of parallel, hexagonally arranged actin tubules, comprising filamentous actin and associated proteins. Actin rod structures are found in diverse organisms, having been observed in spores of Dictyostelium discoideum, Drosophila melanogaster oocytes, as well as in numerous animal cells under stress conditions.","definition_xrefs":["GOC:kp","PMID:27535426","GOC:krc","PMID:19459188","PMID:22623727","PMID:7820870","PMID:11858703","PMID:24813767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle","termid":"GO:0032432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actin rod","termid":"GO:0031002"}


id: MONDO:0007986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metatropic dysplasia (MTD) is a rare spondyloepimetaphyseal dysplasia characterized by a long trunk and short limbs in infancy followed by severe and progressive kyphoscoliosis causing a reversal in proportions during childhood (short trunk and long limbs) and a final short stature in adulthood.","definition_xrefs":["Orphanet:2635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"TRPV4-related bone disorder","termid":"MONDO:0018240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"metatropic dysplasia","secondary_identifiers":["MESH:C537356","DOID:0111514","MEDGEN:82699","NCIT:C175209","SCTID:22764001","NORD:1445","GARD:3571","OMIM:156530","UMLS:C0265281"],"synonyms":[{"name":"Metatropic Dysplasia I","type":"exact"},{"name":"Metatropic dwarfism","type":"exact"},{"name":"Metatropic dysplasia, nonlethal dominant","type":"related"},{"name":"metatropic dysplasia","type":"exact"}],"termid":"MONDO:0007986","xrefs":{"Monarch":{"xref_id":"0007986"}}}


id: GO:1904522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myofibroblast cell apoptotic process.","definition_xrefs":["GOC:TermGenie","PMID:26119034","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of myofibroblast cell apoptotic process","termid":"GO:1904520"},{"relation_name":"positively_regulates","term_name":"myofibroblast cell apoptotic process","termid":"GO:1904516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myofibroblast cell apoptotic process","synonyms":[{"name":"activation of MFB apoptosis","type":"narrow"},{"name":"activation of MFB apoptotic process","type":"narrow"},{"name":"activation of myofibroblast cell apoptosis","type":"narrow"},{"name":"activation of myofibroblast cell apoptotic process","type":"narrow"},{"name":"positive regulation of MFB apoptosis","type":"narrow"},{"name":"positive regulation of MFB apoptotic process","type":"exact"},{"name":"positive regulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"up regulation of MFB apoptosis","type":"narrow"},{"name":"up regulation of MFB apoptotic process","type":"exact"},{"name":"up regulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"up regulation of myofibroblast cell apoptotic process","type":"exact"},{"name":"up-regulation of MFB apoptosis","type":"narrow"},{"name":"up-regulation of MFB apoptotic process","type":"exact"},{"name":"up-regulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"up-regulation of myofibroblast cell apoptotic process","type":"exact"},{"name":"upregulation of MFB apoptosis","type":"narrow"},{"name":"upregulation of MFB apoptotic process","type":"exact"},{"name":"upregulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"upregulation of myofibroblast cell apoptotic process","type":"exact"}],"termid":"GO:1904522"}


id: PATO:0002047
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located on the side nearest to the axis of an organ or organism.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/adaxial"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaxial to","termid":"PATO:0002047"}


id: PBO:0057326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520a","termid":"PBO:0057326"}


id: RO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depends_on","termid":"RO:0002502"}


id: PBO:0052930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-2","termid":"PBO:0052930"}


id: GO:1900098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plasma cell differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of B cell differentiation","termid":"GO:0045577"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"plasma cell differentiation","termid":"GO:0002317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasma cell differentiation","synonyms":[{"name":"regulation of plasma cell development","type":"related"}],"termid":"GO:1900098"}


id: FYPO:0004750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated and has one or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"elongated septated vegetative cell","synonyms":[{"name":"elongated septated cell during mitotic cell cycle","type":"related"},{"name":"elongated septated cells during vegetative growth","type":"exact"},{"name":"long septated cells","type":"exact"}],"termid":"FYPO:0004750"}


id: PBO:0057968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689a","termid":"PBO:0057968"}


id: PBO:0045864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1A lysine methyltransferase 3","termid":"PBO:0045864"}


id: FYPO:0004708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the ratio of large to small ribosomal subunits present in the cytosol is lower than normal..","definition_xrefs":["PMID:26122634","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cytosolic large:small ribosomal subunit ratio","synonyms":[{"name":"decreased 60S:40S cytosolic ribosomal subunit ratio","type":"exact"},{"name":"decreased cytosolic 60S:40S ribosomal subunit ratio","type":"exact"},{"name":"decreased cytosolic large:small ribosomal subunit ratio during mitotic cell cycle","type":"related"},{"name":"decreased cytosolic large:small ribosomal subunit ratio during vegetative growth","type":"exact"},{"name":"decreased cytosolic ribosomal large:small subunit ratio","type":"exact"},{"name":"reduced cytosolic large:small ribosomal subunit ratio","type":"exact"}],"termid":"FYPO:0004708"}


id: PBO:0082728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rix1 complex and pre-replicative complexes (pre-RCs); required for processing of ITS2 sequences from 35S pre-rRNA; component of the pre-60S ribosomal particle with the dynein-related AAA-type ATPase Mdn1p; required for pre-RC formation and maintenance during DNA replication licensing; highly conserved protein which contains several WD40 motifs; IPI3 is an essential gene; other members include Rix1p, Ipi1p, and Ipi3p","termid":"PBO:0082728"}


id: PBO:0052906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-3","termid":"PBO:0052906"}


id: MONDO:0032705
data:
  {"annotated_genes":["SJAG_01616"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85902],"is_not":false,"summary":null,"term":"MONDO:0032705"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of folate metabolism and transport","termid":"MONDO:0017313"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, epilepsy, and hypomyelination","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:597874","UMLS:C5193057","MEDGEN:1684142","GARD:18018","OMIM:618367"],"synonyms":[{"name":"5,10-methenyltetrahydrofolate synthetase deficiency","type":"exact"},{"name":"MTHFS-related developmental delay-microcephaly-short stature-epilepsy syndrome","type":"exact"},{"name":"NEDMEHM","type":"exact"},{"name":"NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, EPILEPSY, AND HYPOMYELINATION","type":"exact"}],"termid":"MONDO:0032705","terms_by_termid":{"MONDO:0032705":null},"xrefs":{"Monarch":{"xref_id":"0032705"}}}


id: GO:2000032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary shoot formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of plant organ formation","termid":"GO:1905428"},{"relation_name":"regulates","term_name":"secondary shoot formation","termid":"GO:0010223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of secondary shoot formation","synonyms":[{"name":"regulation of auxiliary shoot formation","type":"related"},{"name":"regulation of axillary shoot formation","type":"related"},{"name":"regulation of axillary shoot system formation","type":"exact"},{"name":"regulation of shoot branching","type":"related"}],"termid":"GO:2000032"}


id: PATO:0000198
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000198 absolute consumption (obsolete PATO:0000198)","termid":"PATO:0000198"}


id: MONDO:0100427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A characteristic of a diseae in which it does not result from diagnostic and therapeutic procedures undertaken on a patient.","definition_xrefs":["PMID:27407693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iatrogenic or non-iatrogenic","termid":"MONDO:0100369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-iatrogenic","termid":"MONDO:0100427","xrefs":{"Monarch":{"xref_id":"0100427"}}}


id: FYPO:0004783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal protein methyltransferase activity","termid":"FYPO:0005723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"}


id: MONDO:0957788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 18a, autosomal dominant","secondary_identifiers":["UMLS:C5882694","MEDGEN:1844217","OMIM:620512"],"termid":"MONDO:0957788","xrefs":{"Monarch":{"xref_id":"0957788"}}}


id: PBO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase inhibitor associated with endocytosis (predicted)","termid":"PBO:0001317"}


id: GO:0021842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the movement of interneurons away from the signal during migration from the subpallium to the cortex.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion involved in interneuron migration from the subpallium to the cortex","synonyms":[{"name":"negative chemotaxis involved in interneuron migration from the subpallium to the cortex","type":"exact"}],"termid":"GO:0021842"}


id: PBO:0006196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-condition","termid":"PBO:0006196"}


id: GO:0016889
data:
  {"annotated_genes":["SJAG_01044","SJAG_02708","SJAG_03675","SJAG_04752","SJAG_05237","SJAG_00623"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[94530,78348,78974,100975,59609,74137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008821"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 3'-phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"},{"relation_name":"is_a","term_name":"endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters","termid":"GO:0016894"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null,"SJAG_02708":null,"SJAG_03675":null,"SJAG_04752":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0140097","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"DNA endonuclease activity, producing 3'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.22.-"],"synonyms":[{"name":"endodeoxyribonuclease activity, producing 3'-phosphomonoesters","type":"exact"},{"name":"endodeoxyribonuclease activity, producing other than 5'-phosphomonoesters","type":"exact"}],"termid":"GO:0016889","terms_by_termid":{"GO:0008821":null,"GO:0048257":null}}


id: PBO:0055517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2951","termid":"PBO:0055517"}


id: PBO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.11","termid":"PBO:0000167"}


id: GO:0018868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-aminobenzenesulfonate, aniline-o-sulfonic acid, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-aminobenzenesulfonate metabolic process","synonyms":[{"name":"2-aminobenzenesulfonate metabolism","type":"exact"},{"name":"2-aminobenzenesulphonate metabolic process","type":"exact"},{"name":"2-aminobenzenesulphonate metabolism","type":"exact"}],"termid":"GO:0018868"}


id: MONDO:0000922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pelvic inflammatory disease (PID) is an acute or chronic inflammation in the pelvic cavity. It is most commonly caused by sexually transmitted diseases, including chlamydia and gonorrhea that have ascended into the uterus, fallopian tubes, or ovaries as a result of intercourse or childbirth, or of surgical procedures, including insertion of IUDs or abortion. PID may be either symptomatic or asymptomatic. It may cause infertility and it may raise the risk of ectopic pregnancy. PID is a disease associated with HIV infection.","definition_xrefs":["NCIT:C3889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelvic inflammatory disease","secondary_identifiers":["ICD9:614.9","MESH:D000292","DOID:1003","MEDGEN:66845","EFO:1001388","UMLS:C0242172","ICD9:614.8","ICD9:614-616.99","ICD10CM:N70-N77","SCTID:198130006"],"synonyms":[{"name":"PID","type":"exact"},{"name":"PID, pelvic inflammatory disease","type":"related"},{"name":"disease (PID), pelvic inflammatory","type":"related"},{"name":"inflammatory disease (PID), pelvic","type":"related"},{"name":"pelvic infection","type":"related"},{"name":"pelvic inflammatory disease","type":"exact"},{"name":"pelvic inflammatory disease, (PID)","type":"related"}],"termid":"MONDO:0000922","xrefs":{"Monarch":{"xref_id":"0000922"}}}


id: GO:0047506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dAMP + ATP = dADP + ADP.","definition_xrefs":["RHEA:23100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside-phosphate kinase activity, ATP as phosphate donor","termid":"GO:0047507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"deoxyadenylate kinase activity","secondary_identifiers":["EC:2.7.4.11","MetaCyc:DEOXYADENYLATE-KINASE-RXN"],"synonyms":[{"name":"ATP:(d)AMP phosphotransferase activity","type":"related"}],"termid":"GO:0047506"}


id: GO:1904128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of convergent extension involved in somitogenesis.","definition_xrefs":["GO_REF:0000058","PMID:24892953","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of convergent extension involved in axis elongation","termid":"GO:1901233"},{"relation_name":"is_a","term_name":"negative regulation of convergent extension involved in gastrulation","termid":"GO:1904104"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in somitogenesis","termid":"GO:1904127"},{"relation_name":"negatively_regulates","term_name":"convergent extension involved in somitogenesis","termid":"GO:0090246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of convergent extension involved in somitogenesis","synonyms":[{"name":"down regulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"down-regulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"downregulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"inhibition of convergent extension involved in somitogenesis","type":"narrow"}],"termid":"GO:1904128"}


id: GO:0015125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of bile acid from one side of a membrane to the other. Bile acids are any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"bile acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-9733964","Reactome:R-HSA-5661184","Reactome:R-HSA-194079","Reactome:R-HSA-194083","Reactome:R-HSA-194130","Reactome:R-HSA-5661198"],"termid":"GO:0015125"}


id: PBO:0083141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps 3' end of ORF HOT1/YMR172W","termid":"PBO:0083141"}


id: FYPO:0006334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to zinc ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to zinc ion starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to zinc ion starvation","type":"related"},{"name":"decreased RNA level during cellular response to zinc ion depletion","type":"exact"},{"name":"decreased RNA level during cellular response to zinc ion deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to zinc ion limitation","type":"exact"},{"name":"decreased RNA level during cellular response to zinc ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to zinc ion starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to zinc starvation","type":"exact"},{"name":"decreased RNA level in response to zinc ion starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to zinc ion starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to zinc ion starvation","type":"exact"},{"name":"reduced RNA level during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0006334"}


id: PBO:0054599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2003","termid":"PBO:0054599"}


id: GO:0071719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of leukotrienes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Leukotrienes are linear C20 endogenous metabolites of arachidonic acid (icosa-5,8,11,14-tetraenoic acid) containing a terminal carboxy function and four or more double bonds (three or more of which are conjugated) as well as other functional groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene transport","termid":"GO:0071716"},{"relation_name":"is_a","term_name":"sodium-independent icosanoid transport","termid":"GO:0071718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"sodium-independent leukotriene transport","termid":"GO:0071719"}


id: GO:1900461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pseudohyphal growth by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8710886","PMID:11046133","PMID:9987114","GOC:dgf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"positive regulation of pseudohyphal growth","termid":"GO:2000222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter","termid":"GO:1900461"}


id: PBO:0038451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanyl-tRNA synthetase domain containing 1","termid":"PBO:0038451"}


id: MOD:01601
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-121 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01601"}


id: PBO:0041767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 7","termid":"PBO:0041767"}


id: PATO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A phase which starts later than natural start point.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed phase","termid":"PATO:0001542"}


id: GO:0046458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hexadecanal, the C16 straight chain aldehyde.","definition_xrefs":["PMID:25047030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hexadecanal metabolic process","synonyms":[{"name":"hexadecanal metabolism","type":"exact"}],"termid":"GO:0046458"}


id: PBO:0005442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene A-4 hydrolase (predicted)","termid":"PBO:0005442"}


id: MONDO:0016046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial clubfoot with or without associated lower limb anomalies is a rare congenital limb malformation syndrome characterized by malalignment of the bones and joints of the foot and ankle, with presence of forefoot and midfoot adductus, hindfoot varus, and ankle equinus, presenting as rigid inward turning of the foot towards the midline, in various members of a single family. Hypoplasia of lower leg muscles is a frequently associated finding. Patients may present with other low-limb malformations, such as patellar hypoplasia, oblique talus, tibial hemimelia, and polydactyly.","definition_xrefs":["Orphanet:199315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial clubfoot with or without associated lower limb anomalies","secondary_identifiers":["MEDGEN:1843133","GARD:17093","UMLS:C5680522"],"termid":"MONDO:0016046","xrefs":{"Monarch":{"xref_id":"0016046"}}}


id: PBO:0058823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8053","termid":"PBO:0058823"}


id: PBO:0030308
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-misoriented_septum_during_vegetative_growth","termid":"PBO:0030308"}


id: FYPO:0001342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects a response to a stimulus in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"cellular response phenotype during vegetative growth","synonyms":[{"name":"cellular response phenotype during mitotic cell cycle","type":"related"},{"name":"fission yeast cellular response phenotype during vegetative growth","type":"exact"}],"termid":"FYPO:0001342"}


id: PBO:0063044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PALLD antisense RNA 1","termid":"PBO:0063044"}


id: PBO:0062249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BP member 1 pseudogene","termid":"PBO:0062249"}


id: MONDO:0007589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"FZD4-related exudative vitreoretinopathy","termid":"MONDO:1040041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"exudative vitreoretinopathy 1","secondary_identifiers":["UMLS:C1851402","MEDGEN:343561","MESH:C536382","NCIT:C175048","OMIM:133780","GARD:15068","DOID:0111412"],"synonyms":[{"name":"Criswick-Schepens syndrome","type":"related"},{"name":"EVR1","type":"related"},{"name":"FEVR, autosomal dominant","type":"related"},{"name":"exudative vitreoretinopathy 1","type":"exact"},{"name":"exudative vitreoretinopathy type 1","type":"exact"},{"name":"exudative vitreoretinopathy, familial, autosomal dominant","type":"related"},{"name":"retinopathy of prematurity","type":"related"}],"termid":"MONDO:0007589","xrefs":{"Monarch":{"xref_id":"0007589"}}}


id: PBO:0056021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich single-pass membrane protein 2","termid":"PBO:0056021"}


id: GO:0140782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of novofumigatonin, a heavily oxygenated meroterpenoid containing a unique orthoester moiety.","definition_xrefs":["PMID:29968715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"novofumigatonin biosynthetic process","synonyms":[{"name":"novofumigatonin anabolism","type":"exact"},{"name":"novofumigatonin biosynthesis","type":"exact"},{"name":"novofumigatonin formation","type":"exact"},{"name":"novofumigatonin synthesis","type":"exact"}],"termid":"GO:0140782"}


id: MONDO:0006088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A circumscribed neoplasm arising from the glandular epithelium of the appendix. Morphologically, it is characterized by a proliferation of neoplastic glandular cells and it is associated with dysplasia. According to the growth pattern, it may be classified as tubular, villous, or tubulovillous. The dysplasia is classified as mild, moderate, or severe.","definition_xrefs":["NCIT:C43550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenoma","termid":"MONDO:0000527"},{"relation_name":"is_a","term_name":"epithelial tumor of the appendix","termid":"MONDO:0018511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"appendix adenoma","secondary_identifiers":["UMLS:C1706829","MEDGEN:312900","EFO:1000089"],"synonyms":[{"name":"appendix adenoma","type":"exact"},{"name":"vermiform appendix adenoma","type":"exact"}],"termid":"MONDO:0006088","xrefs":{"Monarch":{"xref_id":"0006088"}}}


id: PBO:0017473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-during_which_starts","termid":"PBO:0017473"}


id: GO:0034768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (E)-beta-ocimene + diphosphate.","definition_xrefs":["PMID:12624761","EC:4.2.3.106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(E)-beta-ocimene synthase activity","secondary_identifiers":["RHEA:32691","MetaCyc:RXN-5109"],"termid":"GO:0034768"}


id: PBO:0054610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2015","termid":"PBO:0054610"}


id: PBO:0059827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTERF1 pseudogene 1","termid":"PBO:0059827"}


id: MONDO:0012279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital muscular dystrophy merosin-positive (obsolete MONDO:0012279)","termid":"MONDO:0012279","xrefs":{"Monarch":{"xref_id":"0012279"}}}


id: GO:0006309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments.","definition_xrefs":["GOC:mtg_apoptosis","GOC:tb","PMID:15723341","PMID:23379520","ISBN:0721639976","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA catabolic process","termid":"GO:0006308"},{"relation_name":"part_of","term_name":"apoptotic nuclear changes","termid":"GO:0030262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"apoptotic DNA fragmentation","secondary_identifiers":["GO:0008178","Reactome:R-HSA-140342"],"synonyms":[{"name":"DNA catabolic process during apoptosis","type":"exact"},{"name":"DNA catabolism during apoptosis","type":"exact"},{"name":"DNA fragmentation","type":"broad"},{"name":"DNA fragmentation involved in apoptotic nuclear change","type":"exact"},{"name":"chromatinolysis","type":"broad"},{"name":"endonucleolytic DNA catabolic process involved in apoptosis","type":"exact"}],"termid":"GO:0006309"}


id: MONDO:0015951
data:
  {"annotated_genes":["SJAG_03898","SJAG_02556","SJAG_04114","SJAG_03961","SJAG_04109","SJAG_01049","SJAG_00995","SJAG_02876","SJAG_01372","SJAG_05329","SJAG_02031","SJAG_04791","SJAG_02200","SJAG_04944","SJAG_02334","SJAG_01841","SJAG_04540","SJAG_03206","SJAG_04995","SJAG_02896","SJAG_05283","SJAG_01887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008294"},{"annotations":[86787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008876"},{"annotations":[85260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[85516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[85214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030048"},{"annotations":[85668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"},{"annotations":[85261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013000"},{"annotations":[84953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[86629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016368"},{"annotations":[84864,84863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016369"},{"annotations":[86563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010909"},{"annotations":[86088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013829"},{"annotations":[85535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008297"},{"annotations":[86181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957577"},{"annotations":[86519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"},{"annotations":[86448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010210"},{"annotations":[85657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012531"},{"annotations":[86468,86469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010211"},{"annotations":[86477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010212"},{"annotations":[86436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010215"},{"annotations":[86387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010216"},{"annotations":[86424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010214"}]},"cv_name":"mondo","definition":"Hereditary photodermatoses are a spectrum of rare photosensitive disorders that are often caused by genetic deficiency or malfunction of various components of the DNA repair pathway. This results clinically in extreme photosensitivity, with many syndromes exhibiting an increased risk of cutaneous malignancies.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_01049":null,"SJAG_01372":null,"SJAG_01841":null,"SJAG_01887":null,"SJAG_02031":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02556":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03206":null,"SJAG_03898":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04114":null,"SJAG_04540":null,"SJAG_04791":null,"SJAG_04944":null,"SJAG_04995":null,"SJAG_05283":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary photodermatosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5679594","GARD:20277","Orphanet:183490","MEDGEN:1842494"],"synonyms":[{"name":"genetic photosensitivity","type":"exact"},{"name":"genetic skin photosensitivity","type":"exact"},{"name":"photogenodermatosis","type":"broad"},{"name":"photogénodermatose","type":"broad"}],"termid":"MONDO:0015951","terms_by_termid":{"MONDO:0007369":null,"MONDO:0008294":null,"MONDO:0008296":null,"MONDO:0008297":null,"MONDO:0008319":null,"MONDO:0008876":null,"MONDO:0009902":null,"MONDO:0010210":null,"MONDO:0010211":null,"MONDO:0010212":null,"MONDO:0010214":null,"MONDO:0010215":null,"MONDO:0010216":null,"MONDO:0010420":null,"MONDO:0010909":null,"MONDO:0012531":null,"MONDO:0013000":null,"MONDO:0013829":null,"MONDO:0016368":null,"MONDO:0016369":null,"MONDO:0030048":null,"MONDO:0957577":null},"xrefs":{"Monarch":{"xref_id":"0015951"}}}


id: PBO:0057939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3664","termid":"PBO:0057939"}


id: MONDO:0016632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thrombotic disorder due to a coagulation factors defect (obsolete MONDO:0016632)","secondary_identifiers":["Orphanet:248358"],"termid":"MONDO:0016632","xrefs":{"Monarch":{"xref_id":"0016632"}}}


id: SO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"To substitute a subsection of sequence for another.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000048 substitute (obsolete SO:0000048)","termid":"SO:0000048"}


id: PBO:0004125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1 (predicted)","termid":"PBO:0004125"}


id: GO:0016467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). Found in eukaryotic mitochondria and chloroplasts and in bacteria.","definition_xrefs":["TC:3.A.2.1.3","TC:3.A.2.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-translocating F-type ATPase activity (obsolete GO:0016467)","synonyms":[{"name":"ATP synthase","type":"broad"},{"name":"F1-ATPase activity","type":"exact"},{"name":"hydrogen-translocating F-type ATPase activity","type":"exact"},{"name":"proton-translocating F-type ATPase activity","type":"exact"}],"termid":"GO:0016467"}


id: MOD:00299
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-asparagine residue and an L-lysine residue by an isopeptide bond with the formation of N6-(L-isoaspartyl)-L-lysine and the release of ammonia.","definition_xrefs":["PubMed:11000116","RESID:AA0294","ChEBI:21862","DeltaMass:0","PubMed:6503713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"N6-(L-isoaspartyl)-L-lysine","termid":"MOD:01929"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(L-isoaspartyl)-L-lysine (Asn)","synonyms":[{"name":"(2S)-2-amino-6-([(3S)-3-amino-3-carboxypropanoyl]amino)hexanoic acid","type":"exact"},{"name":"CROSSLNK Isoaspartyl lysine isopeptide (Lys-Asn)","type":"exact"},{"name":"N(epsilon)-(beta-aspartyl)lysine","type":"exact"},{"name":"N-(beta-Aspartyl)-Lysine (Crosslink)","type":"exact"},{"name":"N6-(L-isoaspartyl)-L-lysine","type":"exact"},{"name":"XLNK-4Asp-N6Lys(Asn)","type":"exact"},{"name":"beta-(N6-lysyl)aspartyl acid","type":"exact"},{"name":"isoaspartyl N6-lysine","type":"exact"}],"termid":"MOD:00299"}


id: PATO:0002448
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's bing aligned or positioned towards another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriented towards","termid":"PATO:0002448"}


id: GO:1990847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a peptide pheromone across a membrane and out of a cell by a secretion or export pathway used solely for the export of peptide pheromones that contributes to a conjugation process that results in the union of cellular and genetic information from compatible mating types.","definition_xrefs":["PMID:9236781"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide pheromone transmembrane export involved in positive regulation of conjugation with cellular fusion (obsolete GO:1990847)","termid":"GO:1990847"}


id: GO:0015489
data:
  {"annotated_genes":["SJAG_02125"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70391],"is_not":false,"summary":null,"term":"GO:0015489"}]},"cv_name":"molecular_function","definition":"Enables the transfer of putrescine from one side of a membrane to the other. Putrescine is 1,4-diaminobutane, the polyamine formed by decarboxylation of ornithine and the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"putrescine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0015489","terms_by_termid":{"GO:0015489":null}}


id: GO:1904399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to heparan sulfate.","definition_xrefs":["GOC:TermGenie","GO_REF:0000067","PMID:8567685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"heparan sulfate binding","termid":"GO:1904399"}


id: GO:1903132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tube lumen cavitation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22898778","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"tube lumen cavitation","termid":"GO:0060605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube lumen cavitation","termid":"GO:1903132"}


id: MONDO:0018464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe phosphoribosylpyrophosphate (PRPP) synthetase superactivity is the severe and early-onset form of PRPP synthetase superactivity, an X-linked disorder of purine metabolism associated with hyperuricemia and hyperuricosuria, that is characterized by urolithiasis, gout and neurodevelopmental anomalies.","definition_xrefs":["Orphanet:411543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoribosylpyrophosphate synthetase superactivity","termid":"MONDO:0010395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"severe phosphoribosylpyrophosphate synthetase superactivity","secondary_identifiers":["MEDGEN:1843045","UMLS:C5680017","GARD:17682"],"synonyms":[{"name":"severe PRPP synthetase superactivity","type":"exact"},{"name":"severe PRPS1 superactivity","type":"exact"}],"termid":"MONDO:0018464","xrefs":{"Monarch":{"xref_id":"0018464"}}}


id: MONDO:0005138
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the lung","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"lung cancer","termid":"MONDO:0008903"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0684249","EFO:0001071","icd11.foundation:947165291","NCIT:C4878","DOID:3905","MEDGEN:195765"],"synonyms":[{"name":"cancer of lung","type":"broad"},{"name":"cancer of the lung","type":"broad"},{"name":"carcinoma of lung","type":"exact"},{"name":"carcinoma of the lung","type":"exact"},{"name":"lung cancer","type":"broad"},{"name":"lung cancer, NOS","type":"broad"},{"name":"lung carcinoma","type":"exact"}],"termid":"MONDO:0005138","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0005138"}}}


id: FYPO:0005640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromere clustering is abnormal during one or both meiotic nuclear divisions, such that centromeres dissociate from the spindle pole body, but do not cluster with each other.","definition_xrefs":["PMID:21920317","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic centromere clustering","termid":"FYPO:0004086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000641"],"is_obsolete":false,"name":"abnormal meiotic centromere clustering with centromeres dissociated from spindle pole body","synonyms":[{"name":"abnormal centromere clustering during meiosis with centromeres dissociated from spindle pole body","type":"exact"},{"name":"abnormal centromere clustering with centromeres dissociated from SPB during meiotic cell cycle","type":"related"},{"name":"abnormal centromere clustering with centromeres dissociated from spindle pole body during meiosis","type":"exact"},{"name":"abnormal centromere clustering with centromeres dissociated from spindle pole body during meiotic cell cycle","type":"related"},{"name":"abnormal chromosome retrieval during meiosis with centromeres dissociated from spindle pole body","type":"related"},{"name":"abnormal kinetochore retrieval during meiosis with centromeres dissociated from spindle pole body","type":"related"},{"name":"abnormal meiotic centromere clustering with centromeres dissociated from SPB","type":"exact"}],"termid":"FYPO:0005640"}


id: FYPO:0002928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which polyadenylated RNA molecules have poly(A) tails of normal (i.e. indistinguishable from wild type) length.","definition_xrefs":["PomBase:mah","PMID:24081329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal poly(A) tail length","synonyms":[{"name":"normal polyA sequence length","type":"exact"},{"name":"normal polyA tail length","type":"exact"}],"termid":"FYPO:0002928"}


id: PBO:0082262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminodeoxychorismate lyase (4-amino-4-deoxychorismate lyase); catalyzes the third step in para-aminobenzoic acid biosynthesis; involved in folic acid biosynthesis","termid":"PBO:0082262"}


id: PBO:0116830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, involved in ribosome biogenesis Nop6","termid":"PBO:0116830"}


id: GO:0097538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located on the cilium membrane in the ciliary transition zone; it is connected to the cilium axoneme via Y-shaped links.","definition_xrefs":["PMID:22653444","PMID:4554367","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"},{"relation_name":"part_of","term_name":"ciliary membrane","termid":"GO:0060170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"ciliary necklace","synonyms":[{"name":"cilial necklace","type":"exact"},{"name":"cilium necklace","type":"exact"}],"termid":"GO:0097538"}


id: GO:0046262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of nitrotoluene, any methylbenzene molecule with NO2 group(s) attached.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrotoluene biosynthetic process (obsolete GO:0046262)","synonyms":[{"name":"nitrotoluene anabolism","type":"exact"},{"name":"nitrotoluene biosynthesis","type":"exact"},{"name":"nitrotoluene biosynthetic process","type":"exact"},{"name":"nitrotoluene formation","type":"exact"},{"name":"nitrotoluene synthesis","type":"exact"}],"termid":"GO:0046262"}


id: PBO:0028202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028202"}


id: PBO:0075213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin gamma 1","termid":"PBO:0075213"}


id: GO:0039643
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a host cell that contains the viral genome.","definition_xrefs":["GOC:jl","GOC:bm","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular part","termid":"GO:0033646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell viral nucleoid","termid":"GO:0039643"}


id: PBO:0031118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_processing","termid":"PBO:0031118"}


id: PBO:0071598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 15","termid":"PBO:0071598"}


id: PBO:0082178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor GTPase activating protein (ARF GAP); involved in ER-Golgi transport; required for prospore membrane formation; regulates phospholipase Spo14p; shares functional similarity with Glo3p; GCS1 has a paralog, SPS18, that arose from the whole genome duplication","termid":"PBO:0082178"}


id: PBO:0071662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 3","termid":"PBO:0071662"}


id: GO:0045915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving catecholamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of catecholamine metabolic process","termid":"GO:0042069"},{"relation_name":"positively_regulates","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of catecholamine metabolic process","synonyms":[{"name":"activation of catecholamine metabolic process","type":"narrow"},{"name":"positive regulation of catecholamine metabolism","type":"exact"},{"name":"stimulation of catecholamine metabolic process","type":"narrow"},{"name":"up regulation of catecholamine metabolic process","type":"exact"},{"name":"up-regulation of catecholamine metabolic process","type":"exact"},{"name":"upregulation of catecholamine metabolic process","type":"exact"}],"termid":"GO:0045915"}


id: PBO:0064541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 2","termid":"PBO:0064541"}


id: PBO:0064220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C delta 1","termid":"PBO:0064220"}


id: PBO:0074440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 41","termid":"PBO:0074440"}


id: FYPO:0007038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitochondrion","termid":"FYPO:0004336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitochondrion","synonyms":[{"name":"decreased protein localisation to mitochondrion","type":"exact"},{"name":"decreased protein localization to mitochondrion during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to mitochondrion during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitochondrion","type":"exact"}],"termid":"FYPO:0007038"}


id: MONDO:1011363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulcer disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulcer disease, non-human animal","termid":"MONDO:1011363","xrefs":{"Monarch":{"xref_id":"1011363"}}}


id: PBO:0085797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; conserved among S. cerevisiae strains, not conserved in closely related Saccharomyces species; protein detected via large-scale protein-protein interaction studies and enrichment-based proteogenomics; YJL199C is not an essential gene","termid":"PBO:0085797"}


id: PBO:0025445
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine-pyrimidine metabolism disorders","termid":"PBO:0025445"}


id: PBO:0043138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 6","termid":"PBO:0043138"}


id: MONDO:0008700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acheiropodia is an extremely rare developmental disorder characterized by bilateral, congenital and complete amputation of the distal extremities (amputation of distal epiphysis of the humerus, distal portion of the tibial diaphysis, aplasia of the radius, ulna, fibula) and aplasia of hands and feet (aplasia of carpal, metacarpal, tarsal, metatarsal and phalangeal bones). Rarely, an ectopic bone can be found at the distal end of the humerus. No other systemic manifestations have been reported and the disorder follows an autosomal recessive pattern of inheritance.","definition_xrefs":["Orphanet:931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acheiropody","secondary_identifiers":["SCTID:177504007","OMIM:200500","MEDGEN:120547","UMLS:C0265559","MESH:C536014","GARD:376","DOID:0050603"],"synonyms":[{"name":"ACHP","type":"related"},{"name":"acheiropodia","type":"exact"},{"name":"acheiropody","type":"exact"},{"name":"acheiropody, Brazilian type","type":"related"},{"name":"horn-Kolb syndrome","type":"exact"}],"termid":"MONDO:0008700","xrefs":{"Monarch":{"xref_id":"0008700"}}}


id: PBO:0031441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_protein_during_vegetative_growth","termid":"PBO:0031441"}


id: PBO:0048816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5","termid":"PBO:0048816"}


id: PBO:0066090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 3","termid":"PBO:0066090"}


id: GO:0005310
data:
  {"annotated_genes":["SJAG_00671","SJAG_01406","SJAG_02140","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015139"},{"annotations":[88203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034658"},{"annotations":[96358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[67272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[101456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[101457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901239"},{"annotations":[88204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[101459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of dicarboxylic acids from one side of a membrane to the other. A dicarboxylic acid is an organic acid with two COOH groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"dicarboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015365","Reactome:R-HSA-1614546","Reactome:R-HSA-372843","GO:0005312"],"synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"related"},{"name":"dicarboxylate carrier","type":"narrow"},{"name":"dicarboxylic acid permease activity","type":"related"},{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"narrow"}],"termid":"GO:0005310","terms_by_termid":{"GO:0015131":null,"GO:0015139":null,"GO:0015140":null,"GO:0015183":null,"GO:0015366":null,"GO:0034658":null,"GO:0097434":null,"GO:1901239":null}}


id: MONDO:0000559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000559 (obsolete MONDO:0000559)","termid":"MONDO:0000559","xrefs":{"Monarch":{"xref_id":"0000559"}}}


id: PBO:0081906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 863, pseudogene","termid":"PBO:0081906"}


id: PBO:0064799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 catalytic subunit alpha","termid":"PBO:0064799"}


id: PATO:0001085
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001085 absolute acceleration value (obsolete PATO:0001085)","termid":"PATO:0001085"}


id: GO:0048288
data:
  {"annotated_genes":["SJAG_00810"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78469],"is_not":false,"summary":null,"term":"GO:0048288"}]},"cv_name":"biological_process","definition":"The joining of 2 or more lipid bilayer membranes that surround the nucleus during the creation of a single nucleus from multiple nuclei.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane fusion","termid":"GO:0000740"},{"relation_name":"part_of","term_name":"karyogamy","termid":"GO:0000741"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"nuclear membrane fusion involved in karyogamy","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"nuclear membrane fusion during karyogamy","type":"related"}],"termid":"GO:0048288","terms_by_termid":{"GO:0048288":null}}


id: PBO:0063223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 3","termid":"PBO:0063223"}


id: PBO:0075974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroidogenic acute regulatory protein pseudogene 1","termid":"PBO:0075974"}


id: GO:0009983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of N-terminal tyrosine from a peptide.","definition_xrefs":["GOC:sm","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete tyrosine aminopeptidase activity (obsolete GO:0009983)","synonyms":[{"name":"tyrosine aminopeptidase activity","type":"exact"}],"termid":"GO:0009983"}


id: PBO:0075501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and centriole associated 1","termid":"PBO:0075501"}


id: PBO:0062883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OVCA2 serine hydrolase domain containing","termid":"PBO:0062883"}


id: PBO:0113164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inhibitor of the Anaphase-Promoting Complex/Cyclosome (APC/C); binds to APC/C and inhibits the activity of both APC/C(Cdc20) and APC/C(Cdh1); inhibits the binding of Cdc20 and Cdh1 to APC/C; overexpression results in increased sensitivity to microtubule poison; localizes to peroxisomes; originally identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; functional homolog of human MAD2L1BP (p31comet)","termid":"PBO:0113164"}


id: GO:2000313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040036"},{"relation_name":"regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"regulation of fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:2000313"}


id: PBO:0073769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 2","termid":"PBO:0073769"}


id: PBO:0089707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Obg-like ATPase, human OLA1 ortholog","termid":"PBO:0089707"}


id: GO:0010140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway by which adenine, hypoxanthine and their nucleosides from purine nucleotides breakdown are converted back to purine nucleotides. The salvage pathway is important where there is no de-novo purine nucleotide biosynthesis.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete adenine, hypoxanthine and their nucleoside salvage (obsolete GO:0010140)","synonyms":[{"name":"adenine, hypoxanthine and their nucleoside salvage","type":"exact"}],"termid":"GO:0010140"}


id: GO:0032813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the tumor necrosis factor receptor superfamily.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"tumor necrosis factor receptor superfamily binding","synonyms":[{"name":"TNF receptor superfamily binding","type":"exact"}],"termid":"GO:0032813"}


id: GO:0008488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-glutamate + reduced vitamin K + CO2 + O2 = peptidyl-gamma-carboxyglutamate + vitamin K epoxide.","definition_xrefs":["PMID:18374194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"gamma-glutamyl carboxylase activity","secondary_identifiers":["Reactome:R-HSA-159819","Reactome:R-HSA-163810","EC:4.1.1.90","Reactome:R-HSA-159826","Reactome:R-HSA-9673231","Reactome:R-HSA-159761","Reactome:R-HSA-159795","Reactome:R-HSA-159803","Reactome:R-HSA-163820","Reactome:R-HSA-159752","Reactome:R-HSA-6807214","RHEA:45140"],"termid":"GO:0008488"}


id: PBO:0081542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF454 divergent transcript","termid":"PBO:0081542"}


id: PBO:0034591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-split_kinetochore_during_vegetative_growth","termid":"PBO:0034591"}


id: MONDO:0016631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hemorrhagic disorder due to a platelet anomaly which develops after birth.","gene_count":0,"genotype_count":0,"name":"obsolete hemorrhagic disorder due to an acquired platelet anomaly (obsolete MONDO:0016631)","secondary_identifiers":["Orphanet:248347"],"synonyms":[{"name":"rare bleeding disorder due to an acquired platelet anomaly","type":"exact"},{"name":"rare bleeding disorder due to an acquired thrombopathy and/or thrombocytopenia","type":"exact"},{"name":"rare coagulopathy due to an acquired platelet anomaly","type":"exact"},{"name":"rare coagulopathy due to an acquired thrombopathy and/or thrombocytopenia","type":"exact"},{"name":"rare hemorrhagic disorder due to an acquired thrombopathy and/or thrombocytopenia","type":"exact"}],"termid":"MONDO:0016631","xrefs":{"Monarch":{"xref_id":"0016631"}}}


id: MONDO:0009563
data:
  {"annotated_genes":["SJAG_02433","SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014057"},{"annotations":[85012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"}]},"cv_name":"mondo","definition":"An autosomal recessive inherited disorder caused by mutations in the BCKDHA, BCKDHB, DBT, and DLD genes. It is characterized by a deficiency of branched-chain alpha-keto acid dehydrogenase complex, leading to accumulation of metabolites in the body fluids. The name of the disease derives from the sweet odor of the urine in infants, reminiscent of maple syrup. Signs and symptoms usually appear in infancy and include lethargy and developmental delays. If untreated, it may lead to seizures, coma, and death.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn organic aciduria","termid":"MONDO:0000688"},{"relation_name":"is_a","term_name":"inborn disorder of branched-chain amino acid metabolism","termid":"MONDO:0019242"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02433":null,"SJAG_03290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"maple syrup urine disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:27718001","DOID:9269","icd11.foundation:1623706568","NANDO:2200473","MESH:D008375","OMIMPS:248600","Orphanet:511","NANDO:1200791","ICD10CM:E71.0","NCIT:C34806","GARD:3228","MedDRA:10026817","MEDGEN:6217","UMLS:C0024776","NORD:1400"],"synonyms":[{"name":"BCKD deficiency","type":"exact"},{"name":"BCKDH deficiency","type":"exact"},{"name":"Keto acid decarboxylase deficiency","type":"related"},{"name":"Ketoacidaemia","type":"exact"},{"name":"MSUD","type":"exact"},{"name":"branched chain ketoaciduria","type":"exact"},{"name":"branched-chain 2-ketoacid dehydrogenase deficiency","type":"exact"},{"name":"branched-chain Alpha-Keto acid dehydrogenase deficiency","type":"related"},{"name":"branched-chain ketoaciduria","type":"exact"},{"name":"dihydrolipoamide dehydrogenase deficiency","type":"related"},{"name":"maple syrup urine disease","type":"exact"},{"name":"maple syrup urine disease, Intermediate","type":"related"},{"name":"maple syrup urine disease, classic","type":"related"},{"name":"maple syrup urine disease, intermittent","type":"related"},{"name":"maple syrup urine disease, thiamine-responsive","type":"related"},{"name":"maple syrup urine disease, type 1A","type":"narrow"},{"name":"maple syrup urine disease, type 1B","type":"narrow"},{"name":"maple syrup urine disease, type 2","type":"narrow"}],"termid":"MONDO:0009563","terms_by_termid":{"MONDO:0009529":null,"MONDO:0014057":null},"xrefs":{"Monarch":{"xref_id":"0009563"}}}


id: GO:0051146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle.","definition_xrefs":["CL:0000737","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell differentiation","synonyms":[{"name":"voluntary muscle cell differentiation","type":"narrow"}],"termid":"GO:0051146"}


id: PBO:0059887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 10","termid":"PBO:0059887"}


id: MONDO:0014430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the FBXO31 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 45","secondary_identifiers":["DOID:0081209","GARD:22567","OMIM:615979","MEDGEN:863301","UMLS:C4014864"],"synonyms":[{"name":"FBXO31 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT45","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in FBXO31","type":"exact"},{"name":"intellectual disability, autosomal recessive 45","type":"exact"},{"name":"intellectual disability, autosomal recessive type 45","type":"exact"},{"name":"mental retardation, autosomal recessive 45","type":"related"},{"name":"mental retardation, autosomal recessive type 45","type":"exact"}],"termid":"MONDO:0014430","xrefs":{"Monarch":{"xref_id":"0014430"}}}


id: PBO:0004363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase N2227 family","termid":"PBO:0004363"}


id: PBO:0070478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 13","termid":"PBO:0070478"}


id: MONDO:1012334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone spavin, non-human animal","termid":"MONDO:1011768"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone spavin, horse","secondary_identifiers":["OMIA:001232-9796"],"termid":"MONDO:1012334","xrefs":{"Monarch":{"xref_id":"1012334"}}}


id: GO:0035922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the foramen ovale closes after birth, to prevent blood flow between the right and left atria. In the fetal heart, the foramen ovale allows blood to enter the left atrium from the right atrium. Closure of the foramen ovale after birth stops this blood flow.","definition_xrefs":["UBERON:0004754","GOC:BHF","PMID:19762328","Wikipedia:Foramen_ovale_(heart)","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"foramen ovale closure","synonyms":[{"name":"foramen ovale of heart closure","type":"exact"}],"termid":"GO:0035922"}


id: GO:0039501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that results in the inhibition of host cell type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:add","GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host type I interferon production (obsolete GO:0039501)","synonyms":[{"name":"negative regulation by virus of host type I interferon production","type":"exact"},{"name":"suppression by virus of host interferon type I production","type":"exact"},{"name":"suppression by virus of host type I IFN production","type":"exact"}],"termid":"GO:0039501"}


id: PBO:0087808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein (TBP); general transcription factor that interacts with other factors to form the preinitiation complex at promoters; essential for viability, highly conserved; yeast gene can complement mutations in human homolog TBP","termid":"PBO:0087808"}


id: GO:1904448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aspartate secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:2342602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of aspartate secretion","termid":"GO:1904448"}


id: GO:0005991
data:
  {"annotated_genes":["SJAG_04859","SJAG_01646","SJAG_01427","SJAG_00182","SJAG_01862","SJAG_01531","SJAG_01209","SJAG_00129"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68918,108696,62382,64251,68311,61695,67849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"},{"annotations":[71157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.","definition_xrefs":["GOC:jl","ISBN:0028623819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"trehalose metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mycose metabolic process","type":"exact"},{"name":"mycose metabolism","type":"exact"},{"name":"mykose metabolic process","type":"exact"},{"name":"mykose metabolism","type":"exact"},{"name":"trehalose metabolism","type":"exact"}],"termid":"GO:0005991","terms_by_termid":{"GO:0005992":null,"GO:0005993":null}}


id: PR:O13960
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecm33 gene.","definition_xrefs":["UniProtKB:O13960","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein ecm33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1705.03c","synonyms":[{"name":"Spom972h-ecm33","type":"exact"}],"termid":"PR:O13960"}


id: PBO:0070033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1330, pseudogene","termid":"PBO:0070033"}


id: MONDO:1010965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cauda equina syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cauda equina syndrome, non-human animal","termid":"MONDO:1010227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cauda equina syndrome, dog","secondary_identifiers":["OMIA:000170-9615"],"termid":"MONDO:1010965","xrefs":{"Monarch":{"xref_id":"1010965"}}}


id: PATO:0000672
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000672 unit (obsolete PATO:0000672)","termid":"PATO:0000672"}


id: PBO:0056714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 6","termid":"PBO:0056714"}


id: GO:0010109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photosynthesis.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photosynthesis","termid":"GO:0010109"}


id: GO:0090579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation and maintenance of DNA loops that juxtapose separated regions on the same dsDNA molecule.","definition_xrefs":["PMID:15950878","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete dsDNA loop formation (obsolete GO:0090579)","synonyms":[{"name":"chromatin looping","type":"related"},{"name":"dsDNA looping","type":"exact"}],"termid":"GO:0090579"}


id: PBO:0067141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 189, pseudogene","termid":"PBO:0067141"}


id: PBO:0055877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 3C","termid":"PBO:0055877"}


id: GO:0071460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cell-matrix adhesion.","definition_xrefs":["GOC:sl","PMID:11425869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cell-matrix adhesion","termid":"GO:0071460"}


id: GO:0016010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase.","definition_xrefs":["PMID:16710609","PMID:15117830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein complex","termid":"GO:0090665"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"dystrophin-associated glycoprotein complex","synonyms":[{"name":"DGC","type":"exact"},{"name":"dystrophin glycoprotein complex","type":"exact"}],"termid":"GO:0016010"}


id: GO:1900529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of cell shape that is involved in cellular response to glucose starvation.","definition_xrefs":["PMID:9135147","GOC:TermGenie","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell shape involved in cellular response to glucose starvation (obsolete GO:1900529)","synonyms":[{"name":"regulation of cell shape involved in cellular response to glucose starvation","type":"exact"}],"termid":"GO:1900529"}


id: MONDO:0012398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"achromatopsia","termid":"MONDO:0018852"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal cone dystrophy 3A","secondary_identifiers":["UMLS:C1864900","DOID:0081025","MEDGEN:355864","OMIM:610024","MESH:C566483","GARD:10648"],"synonyms":[{"name":"RCD3A","type":"related"},{"name":"achromatopsia 6","type":"related"},{"name":"cone dystrophy with night blindness and supernormal Rod responses, Pde6H-related","type":"related"},{"name":"cone dystrophy with night blindness and supernormal rod responses PDE6H-related","type":"related"},{"name":"retinal cone dystrophy 3","type":"exact"},{"name":"retinal cone dystrophy 3A","type":"exact"},{"name":"retinal cone dystrophy type 3A","type":"exact"}],"termid":"MONDO:0012398","xrefs":{"Monarch":{"xref_id":"0012398"}}}


id: PBO:0044837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 125","termid":"PBO:0044837"}


id: GO:0016125
data:
  {"annotated_genes":["SJAG_04217","SJAG_00770","SJAG_04049","SJAG_04059","SJAG_03235","SJAG_00370","SJAG_03750","SJAG_03024","SJAG_02068","SJAG_03531","SJAG_03715","SJAG_03598","SJAG_02044","SJAG_03018","SJAG_03929","SJAG_04270","SJAG_01474","SJAG_00413","SJAG_01307","SJAG_04810","SJAG_03509","SJAG_02982","SJAG_00717","SJAG_04499","SJAG_03249","SJAG_00261","SJAG_00624","SJAG_00158","SJAG_04790","SJAG_00453","SJAG_02719","SJAG_04018","SJAG_02855","SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71780],"is_not":false,"summary":null,"term":"GO:0016125"},{"annotations":[89446,74043,80043,107326,65653,107639,109879,72922,88262,116335,76020,109039,80178,71525,94428,76117,71349,73765,69634,70596,75944,76934,79959,115025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[76037,114866,103790,80007,103149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008204"},{"annotations":[93678],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[109644],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[75372],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[88352,105643],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00261":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sterol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-211976"],"synonyms":[{"name":"sterol metabolism","type":"exact"}],"termid":"GO:0016125","terms_by_termid":{"GO:0006696":null,"GO:0008204":null,"GO:0010895":null,"GO:0016125":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: PBO:0071532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 35","termid":"PBO:0071532"}


id: MONDO:0010805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bladder exstrophy (or classic bladder exstrophy; CEB) is a congenital genitourinary malformation belonging to the spectrum of the exstrophy-epispadias complex (EEC) and is characterized by an evaginated bladder plate, epispadias and an anterior defect of the pelvis, pelvic floor and abdominal wall.","definition_xrefs":["Orphanet:93930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exstrophy-epispadias complex","termid":"MONDO:0017919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"bladder exstrophy","secondary_identifiers":["MESH:D001746","MEDGEN:2661","ICD9:753.5","icd11.foundation:1927556258","NCIT:C123207","SCTID:61758007","NORD:860","GARD:6398","UMLS:C0005689","DOID:0080174","HP:0002836"],"synonyms":[{"name":"Bladder Exstrophy-Epispadias-Cloacal Exstrophy Complex","type":"exact"},{"name":"bladder exstrophy","type":"exact"},{"name":"bladder exstrophy (disease)","type":"exact"},{"name":"bladder exstrophy and epispadias Complex","type":"related"},{"name":"classic exstrophy of the bladder","type":"exact"},{"name":"ectopia vesicae","type":"exact"},{"name":"exstrophy of bladder","type":"related"},{"name":"exstrophy of the bladder","type":"related"}],"termid":"MONDO:0010805","xrefs":{"Monarch":{"xref_id":"0010805"}}}


id: PBO:0079842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-13 homolog A","termid":"PBO:0079842"}


id: FYPO:0003977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and one or more clusters of nuclear pores are present in the cytoplasm during mitotic telophase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"has_part","term_name":"nuclear pore aggregation in cytoplasm","termid":"FYPO:0003974"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"abnormal nuclear pore localization","termid":"FYPO:0003973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable vegetative cell with nuclear pore aggregation in cytoplasm during mitotic telophase","synonyms":[{"name":"inviable cell with nuclear pore aggregation in cytoplasm during mitotic telophase during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with NPC aggregation in cytoplasm during mitotic telophase","type":"exact"},{"name":"inviable vegetative cell with aggregated nuclear pores in cytoplasm during mitotic telophase","type":"related"},{"name":"inviable vegetative cell with nuclear pore aggregation in cytoplasm during telophase of mitotic cell cycle","type":"related"},{"name":"inviable vegetative cell with nuclear pore complex aggregation in cytoplasm during mitotic telophase","type":"exact"},{"name":"lethal; vegetative cell with nuclear pore aggregation in cytoplasm during mitotic telophase","type":"exact"}],"termid":"FYPO:0003977"}


id: PBO:0017676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium ion transmembrane transporter Trk1","termid":"PBO:0017676"}


id: PBO:0034294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-visited_by","termid":"PBO:0034294"}


id: MONDO:0006347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the pancreas. It is characterized by the presence of malignant large cells.","definition_xrefs":["NCIT:C95582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large cell neuroendocrine carcinoma","termid":"MONDO:0005057"},{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"},{"relation_name":"is_a","term_name":"pancreatic endocrine carcinoma","termid":"MONDO:0005893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic large cell neuroendocrine carcinoma","secondary_identifiers":["MEDGEN:459465","UMLS:C2987239","EFO:1000442"],"synonyms":[{"name":"large cell neuroendocrine carcinoma of pancreas","type":"exact"},{"name":"pancreas large cell neuroendocrine carcinoma","type":"exact"},{"name":"pancreatic large cell NEC","type":"exact"},{"name":"pancreatic large cell NEC G3","type":"exact"},{"name":"pancreatic large cell neuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0006347","xrefs":{"Monarch":{"xref_id":"0006347"}}}


id: PBO:0113134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formin inhibitor; inhibits Bnr1p-mediated actin filament nucleation but not elongation during vegetative growth; performs distinct but overlapping roles with Hof1p to control actin cable assembly and polarized secretion; spatially focuses Bni1p at mating projection tips, and with Bud6p organizes Bni1p into clusters that nucleate actin assembly during mating projection formation; bnr1 bil2 double mutants are inviable; localizes to the cytosol, secretory vesicles and sites of polarized growth","termid":"PBO:0113134"}


id: PBO:0078572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51F, pseudogene","termid":"PBO:0078572"}


id: PR:O60104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med7 gene.","definition_xrefs":["UniProtKB:O60104","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.08","synonyms":[{"name":"Spom972h-med7","type":"exact"},{"name":"mediator complex subunit 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60104"}


id: PBO:0070879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 11","termid":"PBO:0070879"}


id: MONDO:0005227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process characterized by the accumulation of pus within a newly formed tissue cavity which is the result of a bacterial, fungal, or parasitic infection or the presence of a foreign body.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abscess","secondary_identifiers":["MEDGEN:1684","MESH:D000038","NCIT:C26686","ICD9:682.8","EFO:0003030","ICD9:682.9","SCTID:128477000","Wikipedia:Abscess","UMLS:C0000833"],"synonyms":[{"name":"abscess (disease)","type":"exact"}],"termid":"MONDO:0005227","xrefs":{"Monarch":{"xref_id":"0005227"}}}


id: GO:1904809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dense core granule transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22699897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"regulates","term_name":"dense core granule transport","termid":"GO:1901950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of dense core granule transport","synonyms":[{"name":"regulation of dense core vesicle transport","type":"exact"}],"termid":"GO:1904809"}


id: PBO:0091273
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low complexity gene-free region","termid":"PBO:0091273"}


id: GO:0070474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of uterine smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"regulation of uterine smooth muscle contraction","termid":"GO:0070472"},{"relation_name":"positively_regulates","term_name":"uterine smooth muscle contraction","termid":"GO:0070471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of uterine smooth muscle contraction","synonyms":[{"name":"activation of uterine smooth muscle contraction","type":"narrow"},{"name":"positive regulation of myometrial contraction","type":"exact"},{"name":"positive regulation of myometrial smooth muscle contraction","type":"exact"},{"name":"positive regulation of myometrium contraction","type":"exact"},{"name":"stimulation of uterine smooth muscle contraction","type":"narrow"},{"name":"up regulation of uterine smooth muscle contraction","type":"exact"},{"name":"up-regulation of uterine smooth muscle contraction","type":"exact"},{"name":"upregulation of uterine smooth muscle contraction","type":"exact"}],"termid":"GO:0070474"}


id: MONDO:0008853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Barber Say syndrome (BSS) is a rare ectodermal dysplasia with neonatal onset characterized by congenital generalized hypertrichosis, atrophic skin, ectropion and microstomia.","definition_xrefs":["Orphanet:1231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis of eyelid","termid":"MONDO:0001334"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"congenital entropion","termid":"MONDO:0020159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"Barber-Say syndrome","secondary_identifiers":["MEDGEN:230818","DOID:0060549","GARD:819","NORD:875","SCTID:408537003","OMIM:209885","UMLS:C1319466","icd11.foundation:37248895","MESH:C537908"],"synonyms":[{"name":"BARBER-SAY syndrome","type":"related"},{"name":"BBRSAY","type":"related"},{"name":"Barber Say syndrome","type":"related"},{"name":"Barber-Say syndrome","type":"exact"},{"name":"Brown Séquard Syndrome","type":"exact"},{"name":"Bss","type":"related"},{"name":"hypertrichosis atrophic skin ectropion macrostomia","type":"related"},{"name":"hypertrichosis, atrophic skin, ectropion, and macrostomia","type":"related"},{"name":"hypertrichosis-atrophic skin-ectropion-macrostomia syndrome","type":"exact"}],"termid":"MONDO:0008853","xrefs":{"Monarch":{"xref_id":"0008853"}}}


id: PBO:0089312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan glucosidase Exg2","termid":"PBO:0089312"}


id: GO:0018664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + H+ + NADPH + O2 = 4-hydroxybenzoate + H2O + NADP+.","definition_xrefs":["EC:1.14.14.92","RHEA:18033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"benzoate 4-monooxygenase activity","secondary_identifiers":["MetaCyc:BENZOATE-4-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0623","KEGG_REACTION:R01295"],"synonyms":[{"name":"4-hydroxybenzoic hydroxylase activity","type":"exact"},{"name":"benzoate 4-hydroxylase activity","type":"related"},{"name":"benzoate,NADPH:oxygen oxidoreductase (4-hydroxylating)","type":"related"},{"name":"benzoate-p-hydroxylase activity","type":"related"},{"name":"benzoate-para-hydroxylase activity","type":"related"},{"name":"benzoic 4-hydroxylase activity","type":"related"},{"name":"benzoic acid 4-hydroxylase activity","type":"related"},{"name":"p-hydroxybenzoate hydroxylase activity","type":"related"}],"termid":"GO:0018664"}


id: FYPO:0004712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more nucleotide metabolism RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Nucleotide metabolism RNAs are transcribed from genes whose products are involved in any nucleotide metabolic process.","definition_xrefs":["PomBase:mah","PMID:18203864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of nucleotide metabolism gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of nucleotide metabolism gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of nucleotide metabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of nucleotide metabolism gene transcripts during vegetative growth","type":"exact"},{"name":"decreased nucleotide metabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of nucleotide metabolism gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004712"}


id: PBO:0087244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-rich, hydrophilic protein; overexpression suppresses growth defects of hap2, hap3, and hap4 mutants; expression is under glucose control; cotranscribed with NAM7 in a cyp1 mutant; ISF1 has a paralog, MBR1, that arose from the whole genome duplication","termid":"PBO:0087244"}


id: PBO:0067335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 428, pseudogene","termid":"PBO:0067335"}


id: GO:0035583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Confining TGFbeta to the extracellular matrix (ECM) such that it is separated from other components of the signaling pathway, including its cell surface receptor. TGFbeta is secreted as part of a latent complex that is targeted to the extracellular matrix through latent-TGFbeta-binding protein (LTBP)-mediated association with matrix proteins.","definition_xrefs":["GOC:signaling","GOC:bf","PMID:12482908","GOC:BHF","PMID:20855508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transforming growth factor beta receptor signaling pathway","termid":"GO:0030512"},{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"},{"relation_name":"is_a","term_name":"maintenance of protein location in extracellular region","termid":"GO:0071694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sequestering of TGFbeta in extracellular matrix","synonyms":[{"name":"negative regulation of transforming growth factor beta receptor signaling pathway by extracellular matrix sequestering of TGFbeta","type":"exact"},{"name":"negative regulation of transforming growth factor beta receptor signalling pathway by extracellular matrix sequestering of TGFbeta","type":"exact"},{"name":"sequestering of TGFbeta LLC in extracellular matrix","type":"exact"},{"name":"sequestering of TGFbeta large latency complex in extracellular matrix","type":"exact"}],"termid":"GO:0035583"}


id: GO:0046475
data:
  {"annotated_genes":["SJAG_00622","SJAG_02091","SJAG_03204","SJAG_02093","SJAG_02161","SJAG_04110","SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71346,76306,77099,78354,97565],"is_not":false,"summary":null,"term":"GO:0046475"},{"annotations":[116771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034638"},{"annotations":[74200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"},{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"glycerolipid catabolic process","termid":"GO:0046503"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00622":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_03204":null,"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycerophospholipid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6814848"],"synonyms":[{"name":"glycerophospholipid breakdown","type":"exact"},{"name":"glycerophospholipid catabolism","type":"exact"},{"name":"glycerophospholipid degradation","type":"exact"},{"name":"phosphoglyceride catabolic process","type":"exact"},{"name":"phosphoglyceride catabolism","type":"exact"}],"termid":"GO:0046475","terms_by_termid":{"GO:0006660":null,"GO:0034638":null,"GO:0046475":null}}


id: PBO:0017983
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Partner of DeCapping enzyme protein","termid":"PBO:0017983"}


id: PBO:0044774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 55 pseudogene 1","termid":"PBO:0044774"}


id: MOD:01282
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:206#H","PubMed:15541752","PubMed:10825247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrolein addition +56","termid":"MOD:00557"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +56 - site H","synonyms":[{"name":"Acrolein addition +56","type":"related"},{"name":"Delta:H(4)C(3)O(1)","type":"related"}],"termid":"MOD:01282"}


id: MONDO:0002540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An oligodendroglioma that arises from the central nervous system and occurs during childhood.","definition_xrefs":["NCIT:C4045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"oligodendroglioma","termid":"MONDO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood oligodendroglioma","secondary_identifiers":["NANDO:2200089","DOID:3183","MEDGEN:76116","UMLS:C0280475"],"synonyms":[{"name":"oligodendroglioma","type":"broad"},{"name":"oligodendroglioma of childhood","type":"exact"},{"name":"paediatric oligodendroglioma","type":"exact"},{"name":"pediatric oligodendroglioma","type":"exact"}],"termid":"MONDO:0002540","xrefs":{"Monarch":{"xref_id":"0002540"}}}


id: GO:2001147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to camalexin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"camalexin binding","synonyms":[{"name":"3-(1,3-thiazol-2-yl)-1H-indole binding","type":"exact"}],"termid":"GO:2001147"}


id: MONDO:0013275
data:
  {"annotated_genes":["SJAG_00839"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85983],"is_not":false,"summary":null,"term":"MONDO:0013275"}]},"cv_name":"mondo","definition":"Glucosephosphate isomerase (GPI) deficiency is an erythroenzymopathy characterized by chronic nonspherocytic hemolytic anemia.","definition_xrefs":["Orphanet:712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"},{"relation_name":"is_a","term_name":"anemia due to erythrocyte enzyme disorder","termid":"MONDO:0020585"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00839":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002280","MONDO:0019254","MONDO:0037792","MONDO:0005570"],"is_obsolete":false,"name":"hemolytic anemia due to glucophosphate isomerase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613470","GARD:16541","MEDGEN:462080","UMLS:C3150730"],"synonyms":[{"name":"glucosephosphate isomerase deficiency","type":"exact"},{"name":"hemolytic anemia, nonspherocytic, due to glucose phosphate isomerase deficiency","type":"related"}],"termid":"MONDO:0013275","terms_by_termid":{"MONDO:0013275":null},"xrefs":{"Monarch":{"xref_id":"0013275"}}}


id: MONDO:0005025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the endocardium.","definition_xrefs":["NCIT:C34582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardium disorder","termid":"MONDO:0000470"},{"relation_name":"is_a","term_name":"inflammation of heart layer","termid":"MONDO:0024636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"endocarditis","secondary_identifiers":["SCTID:56819008","UMLS:C0014118","MESH:D004696","MEDGEN:4940","ICD9:421.9","EFO:0000465","HP:0100584","ICD9:424.99","DOID:10314"],"synonyms":[{"name":"endocarditis","type":"exact"},{"name":"endocarditis (disease)","type":"exact"},{"name":"endocardium inflammation","type":"exact"},{"name":"inflammation of endocardium","type":"exact"}],"termid":"MONDO:0005025","xrefs":{"Monarch":{"xref_id":"0005025"}}}


id: PBO:0034194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_replaces","termid":"PBO:0034194"}


id: GO:0004874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an aryl hydrocarbon and transmitting the signal to initiate a change in cell activity. The aryl hydrocarbon receptor is a ligand-activated transcription factor which translocates to the nucleus to activate transcription upon ligand-binding.","definition_xrefs":["PMID:7493958","Wikipedia:Aryl_hydrocarbon_receptor","GOC:ai","PMID:1325649"],"gene_count":0,"genotype_count":0,"name":"obsolete aryl hydrocarbon receptor activity (obsolete GO:0004874)","termid":"GO:0004874"}


id: PBO:0047381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 15","termid":"PBO:0047381"}


id: PBO:0029280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitotic_spindle_pole_body_during_metaphase","termid":"PBO:0029280"}


id: MONDO:0100112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of a single peroxisomal protein, acyl-CoA binding domain containing protein 5, which forms a contact site between the peroxisomes and the ER. The deficiency is characterized by elevated blood very long-chain fatty acids (VLCFAs), retinal dystrophy, cerebral white matter disease and psychomotor delay.","definition_xrefs":["PMID:27899449","PMID:27799409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of plasmalogens biosynthesis","termid":"MONDO:0017986"},{"relation_name":"is_a","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"},{"relation_name":"is_a","term_name":"disorder of peroxisomal transporter","termid":"MONDO:0100372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"acyl-CoA binding domain containing protein 5 deficiency","synonyms":[{"name":"ACBD5 deficiency","type":"exact"},{"name":"acyl-CoA binding domain containing protein 5 deficiency","type":"exact"}],"termid":"MONDO:0100112","xrefs":{"Monarch":{"xref_id":"0100112"}}}


id: MONDO:0008367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"red cell phospholipid defect with hemolysis","secondary_identifiers":["UMLS:C1867339","NANDO:2200634","MESH:C535298","MEDGEN:357960","OMIM:179700"],"synonyms":[{"name":"HPCHA","type":"related"},{"name":"high Red cell phosphatidylcholine hemolytic Anaemia","type":"related"},{"name":"high Red cell phosphatidylcholine hemolytic Anemia","type":"related"},{"name":"leaky Red cell syndrome","type":"related"},{"name":"phosphatidylcholine Red cell Membrane disorder","type":"related"},{"name":"red cell phospholipid defect with hemolysis","type":"exact"}],"termid":"MONDO:0008367","xrefs":{"Monarch":{"xref_id":"0008367"}}}


id: PBO:0004352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sepiapterin reductase (predicted)","termid":"PBO:0004352"}


id: PBO:0040238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATF7-NPFF readthrough","termid":"PBO:0040238"}


id: GO:0042806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to fucose, the pentose 6-deoxygalactose.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"fucose binding","termid":"GO:0042806"}


id: PBO:0002734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase subunit Bgs3","termid":"PBO:0002734"}


id: PBO:0017533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family phosphatidylinositol transmembrane transporter (predicted)","termid":"PBO:0017533"}


id: PBO:0085172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oligopeptide transporter; localized to peroxisomes and affects glutathione redox homeostasis; also localizes to the plasma membrane (PM) and to the late Golgi, and has a role in maintenance of lipid asymmetry between the inner and outer leaflets of the PM; member of the OPT family, with potential orthologs in S. pombe and C. albicans; also plays a role in formation of mature vacuoles and in polarized cell growth","termid":"PBO:0085172"}


id: MONDO:0003053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the choroid plexus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choroid plexus cancer","termid":"MONDO:0002681"},{"relation_name":"is_a","term_name":"intraventricular meningioma","termid":"MONDO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"choroid plexus meningioma","secondary_identifiers":["MEDGEN:98458","DOID:4584","NCIT:C4719","UMLS:C0431118"],"synonyms":[{"name":"choroid meningioma (morphologic abnormality)","type":"exact"},{"name":"choroid plexus meningioma","type":"exact"},{"name":"choroid plexus meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of choroid plexus","type":"exact"},{"name":"meningioma of choroid plexus","type":"related"},{"name":"meningioma of the choroid plexus","type":"exact"}],"termid":"MONDO:0003053","xrefs":{"Monarch":{"xref_id":"0003053"}}}


id: PBO:0050816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 1","termid":"PBO:0050816"}


id: MONDO:0015157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"virus associated tumor","termid":"MONDO:0017341"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human herpesvirus 8-related tumor","secondary_identifiers":["MEDGEN:1843228","UMLS:C5680371","Orphanet:102024","GARD:19830","NCIT:C27697"],"synonyms":[{"name":"HHV-8-related disorder","type":"exact"}],"termid":"MONDO:0015157","xrefs":{"Monarch":{"xref_id":"0015157"}}}


id: PBO:0064685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 21","termid":"PBO:0064685"}


id: PBO:0036554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant C2 domain protein, human FAM102A and FAM102B ortholog","termid":"PBO:0036554"}


id: PBO:0077956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 12-3","termid":"PBO:0077956"}


id: PBO:0061608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1","termid":"PBO:0061608"}


id: PBO:0002517
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.33","termid":"PBO:0002517"}


id: SO:0002159
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved Cdc48/p97 interaction motif with strict consensus sequence F[PI]GKG[TK][RK]LG[GT] and relaxed consensus sequence FXGKGX[RK]LG.","definition_xrefs":["PMID:27655872","PMID:17083136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_motif","termid":"SO:0100017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"SHP_box","synonyms":[{"name":"SHP box","type":"exact"}],"termid":"SO:0002159"}


id: PATO:0000561
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000561 length value (obsolete PATO:0000561)","termid":"PATO:0000561"}


id: PBO:0042142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 3 like 3","termid":"PBO:0042142"}


id: PBO:0003364
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial dysautonomia","termid":"PBO:0003364"}


id: PBO:0085093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear export factor, exportin; major karyopherin involved in export of proteins, RNAs, and ribosomal subunits from the nucleus","termid":"PBO:0085093"}


id: MONDO:0970944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leigh syndrome, mitochondrial","secondary_identifiers":["OMIM:500017"],"termid":"MONDO:0970944","xrefs":{"Monarch":{"xref_id":"0970944"}}}


id: PBO:0089445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, no S. pombe detected","termid":"PBO:0089445"}


id: GO:0060766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the androgen receptor signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033144"},{"relation_name":"is_a","term_name":"regulation of androgen receptor signaling pathway","termid":"GO:0060765"},{"relation_name":"negatively_regulates","term_name":"androgen receptor signaling pathway","termid":"GO:0030521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of androgen receptor signaling pathway","synonyms":[{"name":"negative regulation of androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060766"}


id: MONDO:0009238
data:
  {"annotated_genes":["SJAG_03447"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85140],"is_not":false,"summary":null,"term":"MONDO:0009238"}]},"cv_name":"mondo","definition":"Hereditary folate malabsorption (HFM) is an inherited disorder of folate transport characterized by a systemic and central nervous system (CNS) folate deficiency manifesting as megaloblastic anemia, failure to thrive, diarrhea and/or oral mucositis, immunologic dysfunction and neurological disorders.","definition_xrefs":["Orphanet:90045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaloblastic anemia","termid":"MONDO:0001700"},{"relation_name":"is_a","term_name":"inherited deficiency anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"disorder of folate metabolism and transport","termid":"MONDO:0017313"},{"relation_name":"is_a","term_name":"malabsorption syndrome","termid":"MONDO:0020598"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03447":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hereditary folate malabsorption","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:773545237","NANDO:2200592","OMIM:229050","NCIT:C156424","GARD:12983","NANDO:1200810","MESH:C562799","UMLS:C0342705","DOID:0111678","MEDGEN:83348","SCTID:62578003"],"synonyms":[{"name":"congenital defect of folate absorption","type":"related"},{"name":"congenital folate malabsorption","type":"exact"},{"name":"folate malabsorption, hereditary","type":"related"},{"name":"folic acid transport defect","type":"related"}],"termid":"MONDO:0009238","terms_by_termid":{"MONDO:0009238":null},"xrefs":{"Monarch":{"xref_id":"0009238"}}}


id: GO:0006533
data:
  {"annotated_genes":["SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70674],"is_not":false,"summary":null,"term":"GO:0006533"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate metabolic process","termid":"GO:0006531"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"aspartate catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"aspartate breakdown","type":"exact"},{"name":"aspartate catabolism","type":"exact"},{"name":"aspartate degradation","type":"exact"}],"termid":"GO:0006533","terms_by_termid":{"GO:0006533":null}}


id: PBO:0089395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF757 family protein, human PBDC1 ortholog","termid":"PBO:0089395"}


id: PATO:0001957
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of size which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variability of size","termid":"PATO:0001956"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability of size","synonyms":[{"name":"low variability of size","type":"exact"}],"termid":"PATO:0001957"}


id: MONDO:1011431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gaucher disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gaucher disease, non-human animal","secondary_identifiers":["OMIA:000405"],"termid":"MONDO:1011431","xrefs":{"Monarch":{"xref_id":"1011431"}}}


id: GO:0047198
data:
  {"annotated_genes":["SJAG_01899"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88022],"is_not":false,"summary":null,"term":"GO:0047198"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-substituted L-cysteine + acetyl-CoA = S-substituted N-acetyl-L-cysteine + CoA + H+.","definition_xrefs":["RHEA:19213","EC:2.3.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid N-acetyltransferase activity","termid":"GO:0140085"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01899":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-cysteine-S-conjugate N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.3.1.80-RXN","KEGG_REACTION:R04950","Reactome:R-HSA-5433066"],"synonyms":[{"name":"acetyl-CoA:S-substituted L-cysteine N-acetyltransferase activity","type":"related"},{"name":"cysteine-S-conjugate N-acetyltransferase activity","type":"exact"}],"termid":"GO:0047198","terms_by_termid":{"GO:0047198":null}}


id: PATO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being spread out or scattered about or divided up.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distributed","secondary_identifiers":["PATO:0001513"],"synonyms":[{"name":"diffuse","type":"exact"},{"name":"scattered","type":"exact"}],"termid":"PATO:0001566"}


id: PBO:0070743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 13","termid":"PBO:0070743"}


id: MONDO:0044793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, acquired or congenital, usually single skin lesion. It can occur on any area of the body, but most commonly occurs on the face of children and the thighs of young females. It is characterized by a proliferation of large spindle, oval, or large epithelioid melanocytes in the dermal-epidermal junction. The melanocytic proliferation subsequently extends into the dermis.","definition_xrefs":["NCIT:C27007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign melanocytic skin nevus","termid":"MONDO:0044794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"spitz nevus","secondary_identifiers":["UMLS:C0206739","ICDO:8770/0","MEDGEN:61671"],"synonyms":[{"name":"benign juvenile melanoma","type":"exact"},{"name":"juvenile nevus","type":"exact"},{"name":"spindle and/ or epithelioid cell Nevus","type":"exact"},{"name":"spitz naevus","type":"related"},{"name":"spitz nevi","type":"related"},{"name":"spitz nevus","type":"exact"}],"termid":"MONDO:0044793","xrefs":{"Monarch":{"xref_id":"0044793"}}}


id: PBO:0050776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine (serotonin) oxygenase regulator","termid":"PBO:0050776"}


id: GO:0103004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 9,10-epoxystearate + O2 + NADPH = 9,10-epoxy-18-hydroxystearate + H2O + NADP.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"9,10-epoxystearate hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-9805"],"termid":"GO:0103004"}


id: PBO:0068873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 113, pseudogene","termid":"PBO:0068873"}


id: PBO:0047788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 5","termid":"PBO:0047788"}


id: PR:O13681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ima1 gene.","definition_xrefs":["UniProtKB:O13681","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral inner nuclear membrane protein ima1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.03c","synonyms":[{"name":"Spom972h-ima1","type":"exact"}],"termid":"PR:O13681"}


id: MONDO:0958106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital insensitivity to pain syndrome, Marsili type","secondary_identifiers":["Orphanet:653728"],"termid":"MONDO:0958106","xrefs":{"Monarch":{"xref_id":"0958106"}}}


id: GO:0052092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of nutrient release by host","termid":"GO:0052091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nutrient release by host","synonyms":[{"name":"activation by symbiont of nutrient release from host","type":"narrow"},{"name":"positive regulation by symbiont of nutrient release from host","type":"exact"},{"name":"promotion of nutrient release from host","type":"exact"},{"name":"stimulation by symbiont of nutrient release from host","type":"narrow"},{"name":"up regulation by symbiont of nutrient release from host","type":"exact"},{"name":"up-regulation by symbiont of nutrient release from host","type":"exact"},{"name":"upregulation by symbiont of nutrient release from host","type":"exact"}],"termid":"GO:0052092"}


id: PBO:0062299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 10","termid":"PBO:0062299"}


id: MONDO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the temporal lobe.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"},{"relation_name":"is_a","term_name":"neoplasm of temporal lobe","termid":"MONDO:0021372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"temporal lobe cancer","secondary_identifiers":["DOID:2135","ICD10CM:C71.2","MEDGEN:509347","SCTID:363468009","ICD9:191.2","UMLS:C0153636"],"synonyms":[{"name":"cancer of temporal lobe","type":"exact"},{"name":"malignant neoplasm of temporal lobe","type":"exact"},{"name":"malignant temporal lobe neoplasm","type":"exact"},{"name":"temporal lobe cancer","type":"exact"},{"name":"temporal lobe neoplasm","type":"related"},{"name":"tumour of temporal lobe","type":"related"}],"termid":"MONDO:0002218","xrefs":{"Monarch":{"xref_id":"0002218"}}}


id: PBO:0038922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G4","termid":"PBO:0038922"}


id: GO:0061087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of histone H3-K27 methylation. Histone H3-K27 methylation is the modification of histone H3 by addition of a methyl group to lysine at position 27 of the histone.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K27 methylation (obsolete GO:0061087)","termid":"GO:0061087"}


id: MONDO:0005651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infectious disease that involves fever and bleeding disorder caused by Arenavirus.","definition_xrefs":["EFO:0007151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Arenaviridae infectious disease","termid":"MONDO:0005650"},{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arenavirus hemorrhagic fever","secondary_identifiers":["ICD9:078.7","MEDGEN:509153","MONDO:0024384","SCTID:73730005","UMLS:C0153112"],"synonyms":[{"name":"arenaviral hemorrhagic fever","type":"exact"}],"termid":"MONDO:0005651","xrefs":{"Monarch":{"xref_id":"0005651"}}}


id: PBO:0089085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase,  human DHRS7 family","termid":"PBO:0089085"}


