# terms

id: PBO:0031534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine_amidase_activity","termid":"PBO:0031534"}


id: PR:O74372
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- duo1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit duo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.08c","synonyms":[{"name":"Spom972h-duo1","type":"exact"},{"name":"outer kinetochore protein duo1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74372"}


id: PR:P36607
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.01c","synonyms":[{"name":"DNA repair protein RAD5 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad8","type":"exact"}],"termid":"PR:P36607"}


id: GO:0003230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac atrium over time, from its formation to the mature structure. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac atrium development","termid":"GO:0003230"}


id: MONDO:0030837
data:
  {"annotated_genes":["SJAG_02517"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85582],"is_not":false,"summary":null,"term":"MONDO:0030837"}]},"cv_name":"mondo","definition":"An autosomal dominant neurodevelopmental disorder characterized by global developmental delay apparent in infancy. Affected individuals have delayed walking with variable gait abnormalities, including ataxia and spasticity, impaired intellectual development with poor or absent speech and language, and progressive microcephaly. Dysmorphic facial features may also be observed. Most patients have early-onset seizures; some may develop a demyelinating peripheral neuropathy. The clinical features suggest involvement of both the central and peripheral nervous systems.","definition_xrefs":["OMIM:619092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02517":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, impaired language, epilepsy, and gait abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436788","GARD:18535","MEDGEN:1764121"],"synonyms":[{"name":"NEDMILEG","type":"broad"},{"name":"NEDMILEG, AD","type":"exact"},{"name":"neurodevelopmental disorder with microcephaly, impaired language, epilepsy, and gait abnormalities, autosomal dominant","type":"exact"}],"termid":"MONDO:0030837","terms_by_termid":{"MONDO:0030837":null},"xrefs":{"Monarch":{"xref_id":"0030837"}}}


id: GO:0072020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proximal straight tubule over time, from its formation to the mature structure. The proximal straight tubule is the part of the descending limb that extends from the proximal convoluted tubule to the descending thin tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"proximal tubule development","termid":"GO:0072014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal straight tubule development","synonyms":[{"name":"S3 development","type":"exact"}],"termid":"GO:0072020"}


id: PBO:0026717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_ubiquitinated_protein_in_cell","termid":"PBO:0026717"}


id: MONDO:0004317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple meningiomas that arises from the spinal meninges.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraspinal meningioma","termid":"MONDO:0001279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple spinal canal and spinal cord meningioma","secondary_identifiers":["DOID:7646","MEDGEN:235341","UMLS:C1334825","NCIT:C5275"],"synonyms":[{"name":"multiple Meningiomas of spinal canal and spinal cord","type":"exact"},{"name":"multiple intraspinal Meningiomas","type":"exact"},{"name":"multiple meningiomas of the spinal canal and spinal cord","type":"exact"},{"name":"multiple spinal canal and spinal cord Meningiomas","type":"exact"}],"termid":"MONDO:0004317","xrefs":{"Monarch":{"xref_id":"0004317"}}}


id: GO:0018168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of the chromophore phycoerythrobilin to phycoerythrocyanin via S-phycoerythrobilin-L-cysteine.","definition_xrefs":["RESID:AA0132"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-phycoerythrobilin linkage via S-phycoerythrobilin-L-cysteine (obsolete GO:0018168)","termid":"GO:0018168"}


id: PATO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color brightness which is relatively low.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color brightness","termid":"PATO:0000016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low brightness","synonyms":[{"name":"dark","type":"exact"}],"termid":"PATO:0000327"}


id: PBO:0044702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 Y-linked","termid":"PBO:0044702"}


id: PBO:0084439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltase (alpha-D-glucosidase); encoded within the complex locus MAL4","termid":"PBO:0084439"}


id: GO:0051381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to histamine, a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"histamine binding","termid":"GO:0051381"}


id: PBO:0031467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutathione_gamma-glutamylcysteinyltransferase_activity","termid":"PBO:0031467"}


id: PBO:0018033
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear PassenGer=","termid":"PBO:0018033"}


id: MONDO:1011921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyometra, non-human animal","secondary_identifiers":["OMIA:002391"],"termid":"MONDO:1011921","xrefs":{"Monarch":{"xref_id":"1011921"}}}


id: PBO:0045736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen receptor binding site associated antigen 9","termid":"PBO:0045736"}


id: PATO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000227 motor performance (obsolete PATO:0000227)","termid":"PATO:0000227"}


id: SO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice variant that changes the 2 base region at the 3' end of an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site_variant","termid":"SO:0001629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_acceptor_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:splice_acceptor_variant","type":"exact"},{"name":"Seattleseq:splice-acceptor","type":"exact"},{"name":"VAAST:splice_acceptor_variant","type":"exact"},{"name":"VEP:splice_acceptor_variant","type":"exact"},{"name":"snpEff:SPLICE_SITE_ACCEPTOR","type":"exact"},{"name":"splice acceptor variant","type":"exact"}],"termid":"SO:0001574"}


id: GO:1903347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tight junction assembly.","definition_xrefs":["GOC:jz","GOC:TermGenie","PMID:25050009","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell junction assembly","termid":"GO:1901889"},{"relation_name":"is_a","term_name":"regulation of bicellular tight junction assembly","termid":"GO:2000810"},{"relation_name":"negatively_regulates","term_name":"bicellular tight junction assembly","termid":"GO:0070830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of bicellular tight junction assembly","synonyms":[{"name":"down regulation of tight junction assembly","type":"exact"},{"name":"down regulation of tight junction formation","type":"exact"},{"name":"down-regulation of tight junction assembly","type":"exact"},{"name":"down-regulation of tight junction formation","type":"exact"},{"name":"downregulation of tight junction assembly","type":"exact"},{"name":"downregulation of tight junction formation","type":"exact"},{"name":"inhibition of tight junction assembly","type":"narrow"},{"name":"inhibition of tight junction formation","type":"narrow"},{"name":"negative regulation of tight junction formation","type":"exact"}],"termid":"GO:1903347"}


id: PBO:0087234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway; involved in maintenance of cell wall integrity and recovery from heat shock; required for the arrest of secretion response; WSC2 has a paralog, WSC3, that arose from the whole genome duplication","termid":"PBO:0087234"}


id: FYPO:0001451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to freezing.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to cold","termid":"FYPO:0001450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to freezing","synonyms":[{"name":"increased growth during cellular response to freezing","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to freezing","type":"exact"},{"name":"resistance to freezing during mitotic cell cycle","type":"related"},{"name":"resistance to freezing during vegetative growth","type":"exact"},{"name":"resistant to freeze-thawing","type":"related"},{"name":"resistant to freezing","type":"exact"}],"termid":"FYPO:0001451"}


id: MONDO:0015396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital laryngeal cyst is a rare larynx anomaly characterized by a cyst involving the larynx or supraglottis locations, such as the epiglottis and vallecula. Timing and severity of presentation depend on the size of the cyst and its proximity to the glottis and range from severe prenatal airway obstruction leading to polyhydramnios and pulmonary hypoplasia to postnatal inspiratory stridor associated with muffled cry, hoarseness and cyanotic episodes, and to feeding difficulties and failure to thrive. It can be associated with laryngomalacia.","definition_xrefs":["Orphanet:141124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital laryngeal cyst","secondary_identifiers":["UMLS:C0339880","MEDGEN:451040","icd11.foundation:591042640","GARD:19953","SCTID:765763007"],"termid":"MONDO:0015396","xrefs":{"Monarch":{"xref_id":"0015396"}}}


id: PBO:0053051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 pseudogene 2","termid":"PBO:0053051"}


id: PBO:0114112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex WD repeat subunit Swd3","termid":"PBO:0114112"}


id: PBO:0055882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC7 antisense RNA 1","termid":"PBO:0055882"}


id: FYPO:0000553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of pseudohyphal growth is increased during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased pseudohyphal growth","termid":"FYPO:0003776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased pseudohyphal growth during cellular hyperosmotic response","secondary_identifiers":["FYPO:0000438"],"synonyms":[{"name":"increased filamentous growth during cellular hyperosmotic response","type":"broad"}],"termid":"FYPO:0000553"}


id: PBO:0054117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1483","termid":"PBO:0054117"}


id: MONDO:0037872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease caused by infection with organisms of the genus Bordetella.","direct_ancestors":[{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bordetellosis","secondary_identifiers":["ICD9:041.85","UMLS:C0006015","MEDGEN:637","SCTID:26484003","MESH:D001885"],"synonyms":[{"name":"Bordetella Infection","type":"related"},{"name":"Bordetella Infections","type":"related"},{"name":"Bordetella caused disease or disorder","type":"exact"},{"name":"Bordetella disease or disorder","type":"exact"},{"name":"Bordetella infection","type":"related"},{"name":"Bordetella infectious disease","type":"exact"},{"name":"Bordetellosis","type":"related"},{"name":"INFECT BORDETELLA","type":"related"},{"name":"Infection, Bordetella","type":"related"},{"name":"Infections, Bordetella","type":"related"},{"name":"bordetellosis","type":"exact"}],"termid":"MONDO:0037872","xrefs":{"Monarch":{"xref_id":"0037872"}}}


id: PR:O74531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof7 gene.","definition_xrefs":["UniProtKB:O74531","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein pof7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.08c","synonyms":[{"name":"Spom972h-pof7","type":"exact"}],"termid":"PR:O74531"}


id: GO:0032956
data:
  {"annotated_genes":["SJAG_03655","SJAG_02684","SJAG_02366","SJAG_03086","SJAG_02392","SJAG_04479","SJAG_01993","SJAG_01826","SJAG_03455","SJAG_00424","SJAG_04522","SJAG_00610","SJAG_01821","SJAG_01894","SJAG_04597","SJAG_01774","SJAG_02592","SJAG_02566","SJAG_05000","SJAG_01805","SJAG_01320","SJAG_03048","SJAG_00279","SJAG_04666","SJAG_00521","SJAG_02795","SJAG_00082","SJAG_03486","SJAG_04100","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71312,73010,73026,73896,77531,77703,78742,95648,99249,102638,109899,115111,116278],"is_not":false,"summary":null,"term":"GO:0032956"},{"annotations":[75456,78956,92121,79854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[74278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[98076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[102162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[94205,89787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[107410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032231"},{"annotations":[66844,79104,67722,76554,77085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[93606,119003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament-based process","termid":"GO:0032970"},{"relation_name":"is_a","term_name":"regulation of cytoskeleton organization","termid":"GO:0051493"},{"relation_name":"regulates","term_name":"actin cytoskeleton organization","termid":"GO:0030036"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00279":null,"SJAG_00424":null,"SJAG_00521":null,"SJAG_00610":null,"SJAG_01320":null,"SJAG_01774":null,"SJAG_01805":null,"SJAG_01821":null,"SJAG_01826":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02366":null,"SJAG_02392":null,"SJAG_02566":null,"SJAG_02592":null,"SJAG_02684":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_03048":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_03486":null,"SJAG_03655":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04522":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"regulation of actin cytoskeleton organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:32915139":null},"synonyms":[{"name":"regulation of actin cytoskeleton organisation","type":"exact"},{"name":"regulation of actin cytoskeleton organization and biogenesis","type":"related"}],"termid":"GO:0032956","terms_by_termid":{"GO:0030833":null,"GO:0032231":null,"GO:0032956":null,"GO:0034316":null,"GO:0051016":null,"GO:0120306":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: MONDO:0003961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical large cell neuroendocrine carcinoma (obsolete MONDO:0003961)","termid":"MONDO:0003961","xrefs":{"Monarch":{"xref_id":"0003961"}}}


id: FYPO:0000011
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K 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id: GO:0033967
data:
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id: FYPO:0001789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to oxidative stress","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to oxidative stress","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal protein localization to nucleus during oxidative stress","type":"exact"},{"name":"normal protein localization to nucleus during oxidative stress response","type":"exact"}],"termid":"FYPO:0001789"}


id: PBO:0050355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 58","termid":"PBO:0050355"}


id: GO:0009527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the plastid envelope.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle outer membrane","termid":"GO:0031968"},{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid outer membrane","termid":"GO:0009527"}


id: PBO:0060073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 20","termid":"PBO:0060073"}


id: PBO:0076453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin","termid":"PBO:0076453"}


id: PBO:0003767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid-CoA ligase Lcf1","termid":"PBO:0003767"}


id: GO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the fusion of a phagosome, a vesicle formed by phagocytosis, with a lysosome.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome organization","termid":"GO:0007040"},{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"phagocytosis","termid":"GO:0006909"},{"relation_name":"part_of","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"phagolysosome assembly","synonyms":[{"name":"late phagosome biosynthesis","type":"related"},{"name":"late phagosome formation","type":"related"},{"name":"phagolysosome formation","type":"related"}],"termid":"GO:0001845"}


id: PBO:0040556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9","termid":"PBO:0040556"}


id: GO:0090334
data:
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id: PBO:0059561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1E","termid":"PBO:0059561"}


id: MONDO:0100409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(3;5)(q25;q34). (A cytogenetic abnormality that refers to the translocation of the long arm (q25) of chromosome 3 and the long arm (q34) of chromosome 5. It is associated with the development of acute myeloid leukemia arising from myelodysplastic syndrome, acute myeloid leukemia with multilineage dysplasia, and acute myeloid leukemia with myelodysplasia-related changes.)","definition_xrefs":["NCIT:C36415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, t(3;5)(q25;q34)","secondary_identifiers":["DOID:0081092","NCIT:C7600"],"synonyms":[{"name":"AML, t(3;5)(q25;q34)","type":"exact"}],"termid":"MONDO:0100409","xrefs":{"Monarch":{"xref_id":"0100409"}}}


id: PBO:0000601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Pom2","termid":"PBO:0000601"}


id: MONDO:0018162
data:
  {"annotated_genes":["SJAG_02313","SJAG_04449","SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[86676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"},{"annotations":[86718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011152"},{"annotations":[86321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012596"},{"annotations":[85741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013531"}]},"cv_name":"mondo","definition":"Serine-deficiency syndrome is a very rare infantile-onset potentially treatable neurometabolic disorder characterized clinically by microcephaly, neurodevelopmental disorders and seizures. Three serine-deficiency syndromes have been described: 3-phosphoglycerate dehydrogenase (3-PGDH) deficiency, 3-phosphoserine phosphatase (3-PSP) deficiency, and phosphoserine aminotransferase deficiency.","definition_xrefs":["Orphanet:35705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn serine deficiency","termid":"MONDO:0000421"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02791":null,"SJAG_04449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"neurometabolic disorder due to serine deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680148","GARD:18815","MEDGEN:1842451"],"synonyms":[{"name":"neurometabolic disorder due to serine deficiency","type":"exact"},{"name":"serine deficiency","type":"exact"}],"termid":"MONDO:0018162","terms_by_termid":{"MONDO:0009736":null,"MONDO:0011152":null,"MONDO:0012596":null,"MONDO:0013531":null,"MONDO:0014466":null},"xrefs":{"Monarch":{"xref_id":"0018162"}}}


id: PBO:0079730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 7 (pseudogene)","termid":"PBO:0079730"}


id: PBO:0074868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 52","termid":"PBO:0074868"}


id: PBO:0067069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 97, pseudogene","termid":"PBO:0067069"}


id: GO:0052227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in a second organism resulting in the breakdown of substances, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism of substance in other organism involved in symbiotic interaction (obsolete GO:0052227)","synonyms":[{"name":"catabolism of substance in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052227"}


id: GO:0003102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by angiotensin that increases the rate of diuresis.","definition_xrefs":["GOC:tb","GOC:mtg_cardio","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of diuresis by angiotensin (obsolete GO:0003102)","synonyms":[{"name":"angiotensin-mediated positive regulation of diuresis","type":"exact"},{"name":"positive regulation of diuresis by angiotensin","type":"exact"}],"termid":"GO:0003102"}


id: GO:0004801
data:
  {"annotated_genes":["SJAG_04263"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72894],"is_not":false,"summary":null,"term":"GO:0004801"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-erythrose 4-phosphate + D-fructose 6-phosphate.","definition_xrefs":["PMID:7592346","RHEA:17053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016744"],"is_obsolete":false,"name":"transaldolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.2.1.2","Reactome:R-HSA-5659989","Reactome:R-HSA-71334","Reactome:R-HSA-5659998","MetaCyc:TRANSALDOL-RXN","Reactome:R-HSA-163764"],"synonyms":[{"name":"dihydroxyacetone transferase activity","type":"broad"},{"name":"dihydroxyacetonetransferase activity","type":"broad"},{"name":"glycerone transferase activity","type":"broad"},{"name":"sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity","type":"exact"}],"termid":"GO:0004801","terms_by_termid":{"GO:0004801":null}}


id: PBO:0087218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold protein; assists in association of proteasome core particle with regulatory particle; inhibitor of proteasome in vivo and in vitro; inhibits proteasomal ATPase activity; degraded by the mature proteasome after assembly; contains HEAT-like repeats; protein increases in abundance and relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0087218"}


id: MONDO:0020156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic ankyloblepharon (obsolete MONDO:0020156)","secondary_identifiers":["Orphanet:98565"],"termid":"MONDO:0020156","xrefs":{"Monarch":{"xref_id":"0020156"}}}


id: PBO:0052824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 90, pseudogene","termid":"PBO:0052824"}


id: PBO:0071629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 48","termid":"PBO:0071629"}


id: PBO:0030048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ferric_iron_import","termid":"PBO:0030048"}


id: GO:1900719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uterine smooth muscle relaxation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of relaxation of smooth muscle","termid":"GO:1901080"},{"relation_name":"regulates","term_name":"uterine smooth muscle relaxation","termid":"GO:0044558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of uterine smooth muscle relaxation","synonyms":[{"name":"regulation of smooth muscle relaxation of the uterus","type":"exact"}],"termid":"GO:1900719"}


id: PBO:0059754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 28","termid":"PBO:0059754"}


id: MONDO:0014751
data:
  {"annotated_genes":["SJAG_02401","SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85695,85696],"is_not":false,"summary":null,"term":"MONDO:0014751"}]},"cv_name":"mondo","definition":"Palatal anomalies-widely spaced teeth-facial dysmorphism-developmental delay syndrome is a rare, genetic multiple congenital anomalies/dysmorphic syndrome characterized by global developmental delay, axial hypotonia, palate abnormalities (including cleft palate and/or high and narrow palate), dysmorphic facial features (including prominent forehead, hypertelorism, downslanting palpebral fissures, wide nasal bridge, thin lips and widely spaced teeth), and short stature. Additional manifestations may include digital anomalies (such as brachydactyly, clinodactyly, and hypoplastic toenails), a single palmar crease, lower limb hypertonia, joint hypermobility, as well as ocular and urogenital anomalies.","definition_xrefs":["Orphanet:477993"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02401":null,"SJAG_03997":null},"genotype_count":0,"is_obsolete":false,"name":"palatal anomalies-widely spaced teeth-facial dysmorphism-developmental delay syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17862","OMIM:616728","UMLS:C4225229","MEDGEN:895943"],"synonyms":[{"name":"CPRF","type":"related"},{"name":"cleft palate, psychomotor retardation, and distinctive FACIAL features","type":"related"},{"name":"cleft palate, psychomotor retardation, and distinctive Facial features","type":"related"},{"name":"palatal anomalies-multiple diastemata-facial dysmorphism-developmental delay syndrome","type":"exact"}],"termid":"MONDO:0014751","terms_by_termid":{"MONDO:0014751":null},"xrefs":{"Monarch":{"xref_id":"0014751"}}}


id: PBO:0072944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 23","termid":"PBO:0072944"}


id: PATO:0002359
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's width being notably higher than its length.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"broad","termid":"PATO:0002359"}


id: PBO:0064689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 25","termid":"PBO:0064689"}


id: GO:0032577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a linoleoyl ((9Z,12Z)-octadeca-9,12-dienoyl) group from phosphatidylcholine to an oxygen atom on a cardiolipin molecule.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-linoleoyltransferase activity","termid":"GO:0032576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"phosphatidylcholine:cardiolipin O-linoleoyltransferase activity","synonyms":[{"name":"phosphatidylcholine:cardiolipin linoleoyltransferase","type":"exact"}],"termid":"GO:0032577"}


id: FYPO:0007304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is shorter than normal during anaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short bipolar mitotic spindle","termid":"FYPO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000120","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"short bipolar mitotic spindle during anaphase","synonyms":[{"name":"decreased mitotic spindle length during anaphase","type":"exact"},{"name":"short mitotic spindle during anaphase","type":"exact"},{"name":"short mitotic spindle during anaphase during vegetative growth","type":"exact"},{"name":"short mitotic spindles during anaphase","type":"exact"},{"name":"short spindle during mitotic anaphase","type":"exact"}],"termid":"FYPO:0007304"}


id: GO:0098616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2SeO4 => diphosphate + adenylylselenate.","definition_xrefs":["PMID:2537056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"selenate adenylyltransferase (ATP) activity","secondary_identifiers":["Reactome:R-HSA-2408525"],"termid":"GO:0098616"}


id: GO:0042753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a circadian rhythm behavior.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of circadian rhythm","synonyms":[{"name":"activation of circadian rhythm","type":"narrow"},{"name":"stimulation of circadian rhythm","type":"narrow"},{"name":"up regulation of circadian rhythm","type":"exact"},{"name":"up-regulation of circadian rhythm","type":"exact"},{"name":"upregulation of circadian rhythm","type":"exact"}],"termid":"GO:0042753"}


id: PBO:0089576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in heterochromatin assembly Dri1","termid":"PBO:0089576"}


id: GO:0033540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway in which the initial step, which converts an acyl-CoA to a trans-2-enoyl-CoA, is catalyzed by acyl-CoA oxidase; the electrons removed by oxidation pass directly to oxygen and produce hydrogen peroxide, which is cleaved by peroxisomal catalases. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["MetaCyc:PWY-5136","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"fatty acid beta-oxidation using acyl-CoA oxidase","secondary_identifiers":["Reactome:R-HSA-389887","Reactome:R-HSA-390247"],"termid":"GO:0033540"}


id: PBO:0054056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1398","termid":"PBO:0054056"}


id: GO:1904024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucose catabolic process to lactate via pyruvate.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:dph","PMID:20935145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of fermentation","termid":"GO:1901003"},{"relation_name":"is_a","term_name":"regulation of glucose catabolic process to lactate via pyruvate","termid":"GO:1904023"},{"relation_name":"negatively_regulates","term_name":"glucose catabolic process to lactate via pyruvate","termid":"GO:0019661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"negative regulation of glucose catabolic process to lactate via pyruvate","synonyms":[{"name":"down regulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"down regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"down regulation of homofermentation","type":"exact"},{"name":"down regulation of homofermentative lactate fermentation","type":"exact"},{"name":"down regulation of homofermentative pathway","type":"exact"},{"name":"down regulation of homolactate fermentation","type":"exact"},{"name":"down regulation of homolactic fermentation","type":"exact"},{"name":"down-regulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"down-regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"down-regulation of homofermentation","type":"exact"},{"name":"down-regulation of homofermentative lactate fermentation","type":"exact"},{"name":"down-regulation of homofermentative pathway","type":"exact"},{"name":"down-regulation of homolactate fermentation","type":"exact"},{"name":"down-regulation of homolactic fermentation","type":"exact"},{"name":"downregulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"downregulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"downregulation of homofermentation","type":"exact"},{"name":"downregulation of homofermentative lactate fermentation","type":"exact"},{"name":"downregulation of homofermentative pathway","type":"exact"},{"name":"downregulation of homolactate fermentation","type":"exact"},{"name":"downregulation of homolactic fermentation","type":"exact"},{"name":"inhibition of glucose catabolic process to lactate via pyruvate","type":"narrow"},{"name":"inhibition of glucose fermentation to lactate via pyruvate","type":"narrow"},{"name":"inhibition of homofermentation","type":"narrow"},{"name":"inhibition of homofermentative lactate fermentation","type":"narrow"},{"name":"inhibition of homofermentative pathway","type":"narrow"},{"name":"inhibition of homolactate fermentation","type":"narrow"},{"name":"inhibition of homolactic fermentation","type":"narrow"},{"name":"negative regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"negative regulation of homofermentation","type":"exact"},{"name":"negative regulation of homofermentative lactate fermentation","type":"exact"},{"name":"negative regulation of homofermentative pathway","type":"exact"},{"name":"negative regulation of homolactate fermentation","type":"exact"},{"name":"negative regulation of homolactic fermentation","type":"exact"}],"termid":"GO:1904024"}


id: PBO:0049231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 4","termid":"PBO:0049231"}


id: PBO:0080901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1","termid":"PBO:0080901"}


id: SO:0000496
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7 nucleotide recombination site (e.g. CACTGTG), part of a 5' D-recombination signal sequence (SO:0000556) of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000561"},{"relation_name":"part_of","term_name":"five_prime_D_recombination_signal_sequence","termid":"SO:0000556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_D_heptamer","synonyms":[{"name":"5'D-HEPTAMER","type":"exact"},{"name":"five prime D heptamer","type":"exact"}],"termid":"SO:0000496"}


id: GO:0034051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the hypersensitive response in a plant.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant-type hypersensitive response","termid":"GO:0010363"},{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"negatively_regulates","term_name":"plant-type hypersensitive response","termid":"GO:0009626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plant-type hypersensitive response","synonyms":[{"name":"down regulation of plant-type hypersensitive response","type":"exact"},{"name":"down-regulation of plant-type hypersensitive response","type":"exact"},{"name":"downregulation of plant-type hypersensitive response","type":"exact"},{"name":"inhibition of plant-type hypersensitive response","type":"narrow"},{"name":"negative regulation of HR","type":"exact"},{"name":"negative regulation of HR-PCD","type":"exact"},{"name":"negative regulation of plant hypersensitive response","type":"exact"}],"termid":"GO:0034051"}


id: GO:0097439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which tolerance to severe drying is acquired, before entering into a dry, either dormant or quiescent state.","definition_xrefs":["GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of desiccation tolerance","termid":"GO:0097439"}


id: MOD:01191
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["Unimod:211#C","PubMed:12766232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-ethyl iodoacetamide-d0","termid":"MOD:00561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethyl iodoacetamide-d0 - site C","synonyms":[{"name":"N-ethyl iodoacetamide-d0","type":"related"},{"name":"NEIAA","type":"related"}],"termid":"MOD:01191"}


id: MONDO:0010209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive disorder of purine metabolism characterized by the isolated deficiency of xanthine dehydrogenase, causing hyperxanthinemia with low or absent uric acid and xanthinuria, leading to urolithiasis, hematuria, renal colic and urinary tract infections, while some patients are asymptomatic and others suffer from kidney failure. Less common manifestations include arthropathy, myopathy and duodenal ulcer.","definition_xrefs":["Orphanet:93601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary xanthinuria","termid":"MONDO:0018106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"xanthinuria type I","secondary_identifiers":["SCTID:72682008","UMLS:C0268118","GARD:5621","MEDGEN:82771","OMIM:278300","DOID:0070452","MESH:C562584"],"synonyms":[{"name":"XAN1","type":"exact"},{"name":"XDH deficiency","type":"broad"},{"name":"XO deficiency","type":"broad"},{"name":"XOR deficiency","type":"broad"},{"name":"hereditary xanthinuria, type I","type":"related"},{"name":"isolated xanthine oxidase deficiency","type":"exact"},{"name":"type 1 xanthinuria","type":"related"},{"name":"xanthine dehydrogenase deficiency","type":"broad"},{"name":"xanthine oxidase deficiency","type":"broad"},{"name":"xanthine oxidoreductase deficiency","type":"broad"},{"name":"xanthinuria type 1","type":"exact"},{"name":"xanthinuria type I","type":"exact"},{"name":"xanthinuria, type 1","type":"exact"},{"name":"xanthinuria, type I","type":"exact"}],"termid":"MONDO:0010209","xrefs":{"Monarch":{"xref_id":"0010209"}}}


id: PBO:0087294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single stranded DNA-binding protein found at TG1-3 telomere G-tails; key roles in regulation of telomerase, telomere end protection, conventional telomere replication; regulates telomere replication through recruitment of specific sub-complexes, essential function is telomere capping; forms homodimer via N-terminus; disruption of dimerization leads to short telomeres; autophagy and proteasome are involved in Cdc13p degradation; differentially phosphorylated through cell cycle","termid":"PBO:0087294"}


id: PBO:0091089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MVB sorting pathway protein Ist1","termid":"PBO:0091089"}


id: MONDO:0028741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete overgrowth or tall stature syndrome with skeletal involvement (obsolete MONDO:0028741)","termid":"MONDO:0028741","xrefs":{"Monarch":{"xref_id":"0028741"}}}


id: MONDO:1011173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrosis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis, non-human animal","termid":"MONDO:1010299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrosis, horse","secondary_identifiers":["OMIA:000750-9796"],"termid":"MONDO:1011173","xrefs":{"Monarch":{"xref_id":"1011173"}}}


id: PBO:0057638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1228","termid":"PBO:0057638"}


id: PR:O74925
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane protein pep3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC790.02","secondary_identifiers":["UniProtKB:O74925"],"synonyms":[{"name":"Spom972h-VPS18","type":"exact"},{"name":"vacuolar protein sorting-associated protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74925"}


id: MONDO:0957459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital esophageal stenosis","secondary_identifiers":["MEDGEN:743886","UMLS:C1963580","Orphanet:645749"],"termid":"MONDO:0957459","xrefs":{"Monarch":{"xref_id":"0957459"}}}


id: PBO:0072228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 3","termid":"PBO:0072228"}


id: PBO:0087897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; contains a N-terminal regulatory motif (RI) that acts as a cytoplasmic retention determinant and as an Asi dependent degron in the nucleus; undergoes proteolytic processing by SPS (Ssy1p-Ptr3p-Ssy5p)-sensor component Ssy5p in response to extracellular amino acids; activates transcription of amino acid permease genes and may have a role in tRNA processing; STP1 has a paralog, STP2, that arose from the whole genome duplication","termid":"PBO:0087897"}


id: PBO:0077442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 176B","termid":"PBO:0077442"}


id: MONDO:0054581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Townes-Brocks syndrome","termid":"MONDO:0007142"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Townes-Brocks syndrome 1","secondary_identifiers":["MEDGEN:1635275","OMIM:107480","UMLS:C4551481"],"synonyms":[{"name":"TBS1","type":"related"},{"name":"Townes-Brocks syndrome 1","type":"exact"},{"name":"Townes-Brocks-branchiootorenal-like syndrome","type":"related"},{"name":"anus, imperforate, with hand, Foot, and Ear anomalies","type":"related"},{"name":"deafness, sensorineural, with imperforate anus and thumb anomalies","type":"related"},{"name":"rear syndrome","type":"related"},{"name":"renal-ear-anal-radial syndrome","type":"related"},{"name":"townes-brocks branchiootorenal-like syndrome","type":"exact"}],"termid":"MONDO:0054581","xrefs":{"Monarch":{"xref_id":"0054581"}}}


id: PR:Q8TFG4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB18E9.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFG4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB18E9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB18E9.04c","synonyms":[{"name":"Spom972h-SPAPB18E9.04c","type":"exact"}],"termid":"PR:Q8TFG4"}


id: MONDO:0016603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Citrullinemia type II is a severe subtype of citrin deficiency characterized clinically by adult onset (20 and 50 years of age), recurrent episodes of hyperammonemia and associated neuropsychiatric symptoms such as nocturnal delirium, confusion, restlessness, disorientation, drowsiness, memory loss, abnormal behavior (aggression, irritability, and hyperactivity), seizures, and coma.","definition_xrefs":["Orphanet:247585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrin deficiency","termid":"MONDO:0016602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"citrullinemia type II","secondary_identifiers":["NANDO:1200980","SCTID:716863007","GARD:10215","UMLS:C1863844","NCIT:C150603","MEDGEN:350276"],"synonyms":[{"name":"CTLN2","type":"exact"},{"name":"adult-onset citrin deficiency","type":"exact"},{"name":"adult-onset type 2 citrullinemia","type":"exact"},{"name":"adult-onset type II citrullinemia","type":"exact"},{"name":"citrullinemia type 2","type":"exact"},{"name":"citrullinemia type II","type":"exact"}],"termid":"MONDO:0016603","xrefs":{"Monarch":{"xref_id":"0016603"}}}


id: PBO:0072640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTCA antisense RNA 1","termid":"PBO:0072640"}


id: PBO:0063505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase phosphatase regulatory subunit","termid":"PBO:0063505"}


id: PR:000027561
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha unphosphorylated form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:15226425","PMID:19965387","PMID:21516229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","termid":"PR:P04909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-alpha unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC622.08c","synonyms":[{"name":"Spom-hta1/UnMod","type":"exact"}],"termid":"PR:000027561"}


id: PBO:0048624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric inhibitory polypeptide","termid":"PBO:0048624"}


id: PBO:0051088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 1","termid":"PBO:0051088"}


id: PBO:0054457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1854","termid":"PBO:0054457"}


id: GO:0010091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the formation of branches in plant hair cells. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:tair_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"trichome morphogenesis","termid":"GO:0010090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichome branching","secondary_identifiers":["GO:0048274"],"termid":"GO:0010091"}


id: PBO:0056177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF bZIP transcription factor A","termid":"PBO:0056177"}


id: PR:O74387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rav2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of V-ATPase in vacuolar membrane protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.12","synonyms":[{"name":"RAVE complex subunit rav2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rav2","type":"exact"}],"termid":"PR:O74387"}


id: PBO:0110405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYGO2 and SHC1 antisense RNA 1","termid":"PBO:0110405"}


id: PBO:0116785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAP1 divergent transcript","termid":"PBO:0116785"}


id: GO:0031633
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatophore containing yellow pigment.","definition_xrefs":["ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane-derived chromatophore","termid":"GO:0042716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"xanthophore","termid":"GO:0031633"}


id: GO:0034412
data:
  {"annotated_genes":["SJAG_04771","SJAG_03587","SJAG_04483","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72800],"is_not":false,"summary":null,"term":"GO:0034412"},{"annotations":[94257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[92216,87308],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ascospore wall beta-glucan metabolic process","termid":"GO:0034408"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan biosynthetic process","termid":"GO:0070880"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030437"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0030437","GO:0007049","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"ascospore wall beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall beta-glucan anabolism","type":"exact"},{"name":"ascospore wall beta-glucan biosynthesis","type":"exact"},{"name":"ascospore wall beta-glucan formation","type":"exact"},{"name":"ascospore wall beta-glucan synthesis","type":"exact"}],"termid":"GO:0034412","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0140748":null}}


id: PBO:0029010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029010"}


id: PBO:0078659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 12-1","termid":"PBO:0078659"}


id: PBO:0081865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 804A","termid":"PBO:0081865"}


id: PBO:0058986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT10 histone lysine methyltransferase DOT1L cofactor","termid":"PBO:0058986"}


id: GO:0030340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hyaluronate = n 3-(4-deoxy-beta-D-gluc-4-enuronosyl)-N-acetyl-D-glucosamine.","definition_xrefs":["EC:4.2.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hyaluronate lyase activity","secondary_identifiers":["MetaCyc:HYALURONATE-LYASE-RXN","RHEA:50240"],"synonyms":[{"name":"glucuronoglycosaminoglycan lyase activity","type":"related"},{"name":"hyaluronidase [but cf. EC:3.2.1.35 (hyalurononglucosaminidase) and EC:3.2.1.36 (hyaluronoglucuronidase)]","type":"related"},{"name":"hyaluronidase activity","type":"broad"},{"name":"mucinase activity","type":"related"},{"name":"spreading factor activity","type":"related"}],"termid":"GO:0030340"}


id: PBO:0064151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 3","termid":"PBO:0064151"}


id: GO:0055024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle tissue development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle tissue development","termid":"GO:0016202"},{"relation_name":"regulates","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle tissue development","synonyms":[{"name":"regulation of heart muscle development","type":"exact"}],"termid":"GO:0055024"}


id: GO:0003002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of an axis or axes in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.","definition_xrefs":["GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regionalization","synonyms":[{"name":"pattern formation","type":"related"}],"termid":"GO:0003002"}


id: PBO:0077652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 1A","termid":"PBO:0077652"}


id: PBO:0077492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM212 antisense RNA 1","termid":"PBO:0077492"}


id: PATO:0001329
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flavor quality inhering in a bearer by virtue of the bearer's having flavour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavor","termid":"PATO:0000043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavourful","termid":"PATO:0001329"}


id: PBO:0070951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 6","termid":"PBO:0070951"}


id: PBO:0061620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 4 pseudogene 2","termid":"PBO:0061620"}


id: MONDO:0975746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 92, autosomal recessive","secondary_identifiers":["OMIM:620911"],"termid":"MONDO:0975746","xrefs":{"Monarch":{"xref_id":"0975746"}}}


id: PBO:0044046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and serine rich nuclear protein 3","termid":"PBO:0044046"}


id: PBO:0056898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migration and invasion enhancer 1","termid":"PBO:0056898"}


id: MONDO:0019549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare axonal hereditary motor and sensory neuropathy characterized by early onset (<10 years) progressive distal muscle weakness and wasting of the lower limbs and later, to a lesser extent the upper limbs resulting in foot and wrist drop, areflexia, skeletal deformities (kyphoscoliosis, pes cavus with flattening, joint contractures), mild sensory impairment with vibration sense reduced to a greater extent than pain, optic atrophy and hearing loss. Wheelchair dependence by adolescence is usual and respiratory impairment with diaphragmatic paralysis may develop.","definition_xrefs":["Orphanet:90118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy","termid":"MONDO:0015358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"severe early-onset axonal neuropathy due to MFN2 deficiency","secondary_identifiers":["GARD:19123","SCTID:766977007","MEDGEN:1641956","UMLS:C4707897"],"synonyms":[{"name":"AR-CMT2, Ouvrier type","type":"exact"},{"name":"SEOAN due to MFN2 deficiency","type":"exact"},{"name":"autosomal recessive Charcot-Marie-Tooth disease, Ouvrier type","type":"exact"}],"termid":"MONDO:0019549","xrefs":{"Monarch":{"xref_id":"0019549"}}}


id: PBO:0039024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGAP1 intronic transcript 1","termid":"PBO:0039024"}


id: GO:0009588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of reactions within a cell required to convert absorbed photons from UV-A or blue light into a molecular signal; the UV-A, blue light range is defined as having a wavelength within the range of 315 to 400 nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phototransduction","termid":"GO:0007602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"UV-A, blue light phototransduction","synonyms":[{"name":"blue-sensitive opsin","type":"related"},{"name":"short-wave-sensitive opsin","type":"related"},{"name":"violet-sensitive opsin","type":"related"}],"termid":"GO:0009588"}


id: PBO:0079734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 11 (pseudogene)","termid":"PBO:0079734"}


id: PR:Q9P7U5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC977.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7U5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C977.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.03","synonyms":[{"name":"Spom972h-SPAC977.03","type":"exact"}],"termid":"PR:Q9P7U5"}


id: MONDO:0004254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"papillomatosis","termid":"MONDO:0021098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal intraductal papillomatosis","secondary_identifiers":["NCIT:C7365","DOID:7512","MEDGEN:272635","UMLS:C1333626"],"synonyms":[{"name":"focal intraductal papillomatosis","type":"exact"},{"name":"localised intraductal papillomatosis","type":"related"},{"name":"localized intraductal papillomatosis","type":"related"}],"termid":"MONDO:0004254","xrefs":{"Monarch":{"xref_id":"0004254"}}}


id: PBO:0047213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM222A antisense RNA 1","termid":"PBO:0047213"}


id: GO:0010774
data:
  {"annotated_genes":["SJAG_03751","SJAG_04950","SJAG_02267"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78825,88271,100351],"is_not":false,"summary":null,"term":"GO:0010774"}]},"cv_name":"biological_process","definition":"The cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic strand invasion","termid":"GO:0000708"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02267":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0140013","GO:0006259","GO:0007049","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"meiotic strand invasion involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010774","terms_by_termid":{"GO:0010774":null}}


id: PBO:0040353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 2","termid":"PBO:0040353"}


id: GO:0044256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The whole of the physical, chemical, and biochemical processes carried out by living organisms to break down ingested proteins into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestion","termid":"GO:0007586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein digestion","termid":"GO:0044256"}


id: MONDO:0017955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete granulomatous autoinflammatory syndrome (obsolete MONDO:0017955)","secondary_identifiers":["Orphanet:324930"],"termid":"MONDO:0017955","xrefs":{"Monarch":{"xref_id":"0017955"}}}


id: PBO:0073525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing 19","termid":"PBO:0073525"}


id: MONDO:0032762
data:
  {"annotated_genes":["SJAG_02155"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86945],"is_not":false,"summary":null,"term":"MONDO:0032762"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02155":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 115","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111643","MEDGEN:1681630","OMIM:618457","UMLS:C5193108"],"synonyms":[{"name":"DFNB115","type":"narrow"},{"name":"deafness, autosomal recessive 115","type":"narrow"}],"termid":"MONDO:0032762","terms_by_termid":{"MONDO:0032762":null},"xrefs":{"Monarch":{"xref_id":"0032762"}}}


id: PR:G2TRT4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP domain-containing new25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.21","synonyms":[{"name":"Spom972h-new25","type":"exact"}],"termid":"PR:G2TRT4"}


id: GO:0102446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rhamnetin + S-adenosyl-L-methionine = 3',4',5-trihydroxy-3,7-dimethoxyflavone + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"rhamnetin 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13932"],"termid":"GO:0102446"}


id: GO:0051274
data:
  {"annotated_genes":["SJAG_04659","SJAG_04509","SJAG_04073","SJAG_02590","SJAG_01835","SJAG_04668","SJAG_01453","SJAG_00218","SJAG_01290","SJAG_04483","SJAG_02446","SJAG_04771","SJAG_05285","SJAG_03587","SJAG_00610","SJAG_02222","SJAG_01787","SJAG_01288","SJAG_03123","SJAG_04462","SJAG_00876","SJAG_01255","SJAG_03705","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74944,63285,76623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[94257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[72800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[72802,70582,75578,74287,91390,105904,112954,115612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[77977,102438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[92216,87308],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[87686],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[90563,92200,117830,102639,105146,105717,117705],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"beta-glucan anabolism","type":"exact"},{"name":"beta-glucan biosynthesis","type":"exact"},{"name":"beta-glucan formation","type":"exact"},{"name":"beta-glucan synthesis","type":"exact"}],"termid":"GO:0051274","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0032043
data:
  {"annotated_genes":["SJAG_01948"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90169],"is_not":false,"summary":null,"term":"GO:0032043"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mitochondrial DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA catabolic process","termid":"GO:0006308"},{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"mitochondrial DNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial DNA breakdown","type":"exact"},{"name":"mitochondrial DNA catabolism","type":"exact"},{"name":"mitochondrial DNA degradation","type":"exact"},{"name":"mtDNA breakdown","type":"exact"},{"name":"mtDNA catabolic process","type":"exact"},{"name":"mtDNA catabolism","type":"exact"},{"name":"mtDNA degradation","type":"exact"}],"termid":"GO:0032043","terms_by_termid":{"GO:0032043":null}}


id: GO:0009512
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that transfers electrons from reduced plastoquinone to oxidized plastocyanin and translocates protons from the stroma to the lumen. The complex contains a core structure of three catalytic subunits: cytochrome b, the Rieske iron sulfur protein (ISP), and cytochrome f, which are arranged in an integral membrane-bound dimeric complex; additional subunits are present, and vary among different species.","definition_xrefs":["ISBN:0943088399","PMID:16352458","PMID:16228398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex","termid":"GO:0070069"},{"relation_name":"part_of","term_name":"thylakoid","termid":"GO:0009579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytochrome b6f complex","secondary_identifiers":["Wikipedia:Cytochrome_b6f_complex"],"synonyms":[{"name":"cyt b(6)f complex","type":"exact"},{"name":"cyt b6-f complex","type":"exact"},{"name":"cyt b6/f complex","type":"exact"},{"name":"cyt b6f complex","type":"exact"},{"name":"cytochrome b(6)f complex","type":"exact"},{"name":"cytochrome b6-f complex","type":"exact"},{"name":"cytochrome b6/f complex","type":"exact"}],"termid":"GO:0009512"}


id: GO:0097086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whereby a relatively unspecialized cell acquires specialized features of an amniotic stem cell. An amniotic stem cell is a mesenchymal stem cell extracted from amniotic fluid. Amniotic stem cells are able to differentiate into various tissue types such as skin, cartilage, cardiac tissue, nerves, muscle, and bone.","definition_xrefs":["CL:0002639","PMID:20942606","GOC:yaf","Wikipedia:Amniotic_stem_cells"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amniotic stem cell differentiation","termid":"GO:0097086"}


id: PBO:0080484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 3B","termid":"PBO:0080484"}


id: GO:1903121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902041"},{"relation_name":"regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903121"}


id: GO:1902441
data:
  {"annotated_genes":["SJAG_03915","SJAG_04901","SJAG_02529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91091,96668,113721],"is_not":false,"summary":null,"term":"GO:1902441"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a meiotic spindle pole body.","definition_xrefs":["PMID:20833892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle pole body","termid":"GO:0071988"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic spindle pole body organization","termid":"GO:1990395"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02529":null,"SJAG_03915":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150","GO:0007049","GO:0051179"],"is_obsolete":false,"name":"protein localization to meiotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990945","GO:1990954"],"synonyms":[{"name":"establishment of protein localization to meiotic spindle pole body","type":"narrow"},{"name":"protein localisation in meiotic spindle pole body","type":"exact"},{"name":"protein localisation to meiotic spindle pole body","type":"exact"},{"name":"protein localization in meiotic spindle pole body","type":"exact"},{"name":"protein location to meiotic spindle pole body","type":"exact"}],"termid":"GO:1902441","terms_by_termid":{"GO:1902441":null}}


id: MONDO:0968955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta","termid":"MONDO:0019507"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocalcified amelogenesis imperfecta","secondary_identifiers":["Orphanet:100032","MEDGEN:140773","GARD:16931","icd11.foundation:1793262466","UMLS:C0399376"],"synonyms":[{"name":"amelogenesis imperfecta type 3","type":"exact"}],"termid":"MONDO:0968955","xrefs":{"Monarch":{"xref_id":"0968955"}}}


id: PBO:0031654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_re-entry_into_mitotic_cell_cycle_after_pheromone_arrest","termid":"PBO:0031654"}


id: PBO:0014256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex (RQC) complex subunit Rqc1 (predicted)","termid":"PBO:0014256"}


id: GO:1902286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any semaphorin-plexin signaling pathway that is involved in dendrite guidance.","definition_xrefs":["GOC:BHF","PMID:22790009","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway involved in neuron projection guidance","termid":"GO:1902285"},{"relation_name":"part_of","term_name":"dendrite guidance","termid":"GO:0070983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in dendrite guidance","synonyms":[{"name":"semaphorin-plexin signaling pathway involved in dendritic guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in dendrite guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in dendritic guidance","type":"exact"}],"termid":"GO:1902286"}


id: MONDO:0007275
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020730"}]},"cv_name":"mondo","definition":"Entrapment of the median nerve in the wrist that is characterized by numbness, tingling and painful movement.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"nerve compression syndrome","termid":"MONDO:0003615"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"carpal tunnel syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:57406009","UMLS:C0007286","Orphanet:50838","MESH:D002349","OMIMPS:115430","DOID:12169","ICD9:354.0","MEDGEN:2856","NCIT:C34450","EFO:0004143","icd11.foundation:1275186848","ICD10CM:G56.0"],"synonyms":[{"name":"CTS","type":"related"},{"name":"CTS - carpal tunnel syndrome","type":"exact"},{"name":"amyotrophy, thenar, of carpal origin","type":"related"},{"name":"carpal tunnel median neuropathy","type":"exact"},{"name":"carpal tunnel syndrome","type":"exact"},{"name":"median nerve entrapment","type":"exact"}],"termid":"MONDO:0007275","terms_by_termid":{"MONDO:0020730":null},"xrefs":{"Monarch":{"xref_id":"0007275"}}}


id: MOD:01895
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 3x(12)C-labeled propanoyl group.","definition_xrefs":["PubMed:12175151","PubMed:11999733","PubMed:11857757","Unimod:58#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino propanoylated residue","termid":"MOD:00451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino 3x(12)C-labeled propanoylated residue","synonyms":[{"name":"Propionate labeling reagent light form (N-term & K)","type":"related"},{"name":"Propionyl","type":"related"}],"termid":"MOD:01895"}


id: PBO:0088628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Spb1","termid":"PBO:0088628"}


id: FYECO:0000035
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which copper ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Cu ions","synonyms":[{"name":"copper ions added","type":"exact"}],"termid":"FYECO:0000035"}


id: MONDO:0013487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complement deficiency","termid":"MONDO:0003832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"recurrent Neisseria infections due to factor D deficiency","secondary_identifiers":["GARD:17055","OMIM:613912","SCTID:234607008","MESH:C565027","NANDO:2200788","UMLS:C0398764","MEDGEN:97989","icd11.foundation:528757185","ICD9:279.8","Orphanet:169467"],"synonyms":[{"name":"CFDD","type":"related"},{"name":"complement factor D deficiency","type":"related"},{"name":"factor D deficiency","type":"related"},{"name":"recurrent Neisseria infections due to factor D deficiency","type":"exact"}],"termid":"MONDO:0013487","xrefs":{"Monarch":{"xref_id":"0013487"}}}


id: PBO:0058515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5703","termid":"PBO:0058515"}


id: GO:0072177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric duct over time, from its initial formation to a mature structure. A mesonephric duct is a tube drains the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"},{"relation_name":"is_a","term_name":"nephric duct development","termid":"GO:0072176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric duct development","synonyms":[{"name":"Wolffian duct development","type":"exact"}],"termid":"GO:0072177"}


id: FYPO:0005772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at tRNA genes. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah","PMID:27611590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at tRNA genes during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased histone H2A phosphorylation at transfer RNA genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005772"}


id: PBO:0046177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK4","termid":"PBO:0046177"}


id: MONDO:1010160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndactyly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly, non-human animal","secondary_identifiers":["OMIA:000963"],"termid":"MONDO:1010160","xrefs":{"Monarch":{"xref_id":"1010160"}}}


id: FYPO:0008058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed  ability of a polyA robonuclease to catalyze consecutive reactions without releasing the substrate (i.e. template) is abnormal.","definition_xrefs":["PMID:19307292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal enzyme processivity","termid":"FYPO:0008057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased polyA ribonuclease processivity","termid":"FYPO:0008058"}


id: GO:0099098
data:
  {"annotated_genes":["SJAG_04003","SJAG_03073","SJAG_03835","SJAG_02509","SJAG_03673","SJAG_02737","SJAG_04387"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70455,109403,113737,116741,101243,74753,107225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"}]},"cv_name":"biological_process","definition":"The movement of a cellular component as a result of microtubule polymerization.","definition_xrefs":["GOC:cjm","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule polymerization based movement","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0099098","terms_by_termid":{"GO:0098863":null}}


id: MONDO:0010379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monoamine oxidase-A deficiency is a very rare recessive X-linked biogenic amine metabolism disorder characterized clinically by mild intellectual deficit, impulsive aggressiveness, and sometimes violent behavior and presenting from childhood.","definition_xrefs":["Orphanet:3057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of neurotransmitter metabolism and transport","termid":"MONDO:0019219"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"Brunner syndrome","secondary_identifiers":["SCTID:718210003","DOID:0060693","GARD:3531","OMIM:300615","UMLS:C0796275","MEDGEN:208683","MESH:C563156"],"synonyms":[{"name":"BRNRS","type":"related"},{"name":"Brunner syndrome","type":"exact"},{"name":"Brunner syndrome, X-linked recessive","type":"exact"},{"name":"antisocial behavior, X-linked recessive","type":"exact"},{"name":"antisocial behavior, susceptibility to","type":"related"},{"name":"monoamine oxidase A deficiency","type":"exact"}],"termid":"MONDO:0010379","xrefs":{"Monarch":{"xref_id":"0010379"}}}


id: GO:0043534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an endothelial cell into the extracellular matrix in order to form new blood vessels during angiogenesis.","definition_xrefs":["PMID:11166264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell migration","termid":"GO:0043542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell migration","termid":"GO:0043534"}


id: PBO:0082474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; promotes vegetative growth in response to nutrients via the Ras-cAMP signaling pathway; partially redundant with Tpk1p and Tpk2p; localizes to P-bodies during stationary phase; TPK3 has a paralog, TPK1, that arose from the whole genome duplication","termid":"PBO:0082474"}


id: GO:0046977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TAP protein, transporter associated with antigen processing protein. TAP protein is a heterodimeric peptide transporter consisting of the subunits TAP1 and TAP2.","definition_xrefs":["PMID:11133832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TAP binding","termid":"GO:0046977"}


id: PBO:0028948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate-cysteine_ligase_activity","termid":"PBO:0028948"}


id: FYPO:0005120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is greater than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during meiotic cell cycle","synonyms":[{"name":"increased RNA accumulation during meiotic cell cycle","type":"related"},{"name":"increased transcript level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005120"}


id: MONDO:0020300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A seizure disorder characterized by intermittent dystonia and/or choreoathetoid movements that occur during sleep. The clusters of nocturnal motor seizures are often stereotyped and brief.","definition_xrefs":["Orphanet:98784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal lobe epilepsy","termid":"MONDO:0002612"},{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant nocturnal frontal lobe epilepsy","secondary_identifiers":["DOID:0060681","UMLS:C3696898","ICD9:345.80","MESH:C579932","icd11.foundation:1004734747","MEDGEN:777188","SCTID:698021005","GARD:11918"],"synonyms":[{"name":"ADNFLE","type":"exact"},{"name":"ENFL","type":"exact"}],"termid":"MONDO:0020300","xrefs":{"Monarch":{"xref_id":"0020300"}}}


id: PBO:0077212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 3","termid":"PBO:0077212"}


id: MOD:00459
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 4x(13)C labeled succinyl group.","definition_xrefs":["Unimod:66#N-term","PubMed:11857757","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(13)C labeled alpha-amino succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4C13), N-term & K","type":"related"},{"name":"Succinyl:13C(4)","type":"related"}],"termid":"MOD:00459"}


id: GO:0036288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ximelagatran stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ximelagatran","termid":"GO:0036288"}


id: MONDO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung with reduced markings on its chest radiograph and increased areas of transradiancy (hyperlucency). A hyperlucent lung is usually associated with pulmonary emphysema or pneumothorax.","definition_xrefs":["MESH:D019568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlucent lung","secondary_identifiers":["DOID:10032","MEDGEN:101178","UMLS:C0524799"],"termid":"MONDO:0000925","xrefs":{"Monarch":{"xref_id":"0000925"}}}


id: PBO:0059315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L54","termid":"PBO:0059315"}


id: GO:0048885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a migrating neuromast primordium deposits clusters of undifferentiated cells (proneuromasts) along its migratory path in a developing lateral line.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast deposition","termid":"GO:0048885"}


id: MONDO:0010243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked immunoneurologic disorder is characterized by immune deficiency and neurological disorders in females, and by neonatal death in males.","definition_xrefs":["Orphanet:2571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"X-linked immunoneurologic disorder","secondary_identifiers":["OMIM:300076","icd11.foundation:1464555617","MESH:C536743","UMLS:C1848144","SCTID:719827008","GARD:274","MEDGEN:341162"],"synonyms":[{"name":"Woods Black Norbury syndrome","type":"exact"},{"name":"Woods-Black-Norbury syndrome","type":"exact"},{"name":"Woods-Black-Norbury syndrome, X-linked dominant","type":"exact"},{"name":"X-linked immunoneurological disorder","type":"exact"},{"name":"immunoneurologic disorder, X-linked","type":"exact"},{"name":"neonatal death immune deficiency","type":"exact"}],"termid":"MONDO:0010243","xrefs":{"Monarch":{"xref_id":"0010243"}}}


id: PBO:0082514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the histone acetyltransferase complex (NuA4); acetylates four conserved internal lysines of histone H4 N-terminal tail and can acetylate histone H2A; master regulator of cellular acetylation balance; required for cell cycle progression and transcriptional silencing at the rDNA locus and regulation of autophagy; human ortholog TIP60/KAT5 is implicated in cancer and other diseases, functionally complements lethality of the esa1 null mutation","termid":"PBO:0082514"}


id: PBO:0039949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ariadne RBR E3 ubiquitin protein ligase 2","termid":"PBO:0039949"}


id: MONDO:0700212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tuberculosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease, non-human animal","termid":"MONDO:0700050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculosis, non-human animal","termid":"MONDO:0700212","xrefs":{"Monarch":{"xref_id":"0700212"}}}


id: PBO:0047149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 181 member B","termid":"PBO:0047149"}


id: GO:0045229
data:
  {"annotated_genes":["SJAG_01171","SJAG_04868","SJAG_01888","SJAG_01321","SJAG_02845","SJAG_02446","SJAG_04595","SJAG_00218","SJAG_02192","SJAG_04462","SJAG_05001","SJAG_01290","SJAG_01835","SJAG_02649","SJAG_03295","SJAG_03444","SJAG_04073","SJAG_01181","SJAG_01017","SJAG_02718","SJAG_03631","SJAG_03646","SJAG_04620","SJAG_00974","SJAG_00667","SJAG_03013","SJAG_02590","SJAG_00163","SJAG_01227","SJAG_02733","SJAG_01453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90038,91565,88000,88492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[101742,107863,88882,93818,111110,88066,99950,101743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"},{"annotations":[76123,89122,109845,75577,80061,74945,75087,70581,71028,70644,74286,102250,77642,77675,76624,79345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031505"},{"annotations":[110773,71353,87383],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of external structures that lie outside the plasma membrane and surround the entire cell.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00218":null,"SJAG_00667":null,"SJAG_00974":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01181":null,"SJAG_01227":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_01888":null,"SJAG_02192":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02649":null,"SJAG_02718":null,"SJAG_02733":null,"SJAG_02845":null,"SJAG_03013":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03631":null,"SJAG_03646":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04595":null,"SJAG_04620":null,"SJAG_04868":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"external encapsulating structure organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"external encapsulating structure organisation","type":"exact"},{"name":"external encapsulating structure organization and biogenesis","type":"exact"}],"termid":"GO:0045229","terms_by_termid":{"GO:0030476":null,"GO:0031505":null,"GO:0060237":null,"GO:1904541":null}}


id: PBO:0048390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 1","termid":"PBO:0048390"}


id: MONDO:0010990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Cd4/CD8 T-cell ratio (obsolete MONDO:0010990)","secondary_identifiers":["OMIM:601083"],"synonyms":[{"name":"Cd4/CD8 T-cell ratio","type":"exact"}],"termid":"MONDO:0010990","xrefs":{"Monarch":{"xref_id":"0010990"}}}


id: PATO:0000385
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000385 hardness value (obsolete PATO:0000385)","termid":"PATO:0000385"}


id: PBO:0086367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative alternate subunit of succinate dehydrogenase (SDH); mitochondrial inner membrane protein; genetic interaction with SDH4 suggests that Shh4p can function as a functional SDH subunit; a fraction copurifies with SDH subunit Sdh3p; expression induced by nitrogen limitation in a GLN3, GAT1-dependent manner; Shh4p has greater similarity to human SDHD (subunit D of SDH, implicated in paraganglioma) than does its paralog Sdh4p","termid":"PBO:0086367"}


id: PBO:0031697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_nuclear_fusion_during_mating","termid":"PBO:0031697"}


id: PBO:0061236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP16 nucleolar protein","termid":"PBO:0061236"}


id: GO:0048535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes.","definition_xrefs":["ISBN:068340007X","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymph node development","synonyms":[{"name":"lymph gland development","type":"broad"}],"termid":"GO:0048535"}


id: PBO:0114498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA double-strand break repair; synergistic defect in DSB repair via single-strand annealing with the RAD52 null mutant; possible role in the end resection process; non-essential gene; null mutant has a sporulation defect, displays increased levels of spontaneous Rad52p foci and has a respiratory growth defect","termid":"PBO:0114498"}


id: PBO:0087384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol regulatory element binding protein; induces sterol biosynthetic genes, upon sterol depletion; acts as a sterol sensor, binding ergosterol in sterol rich conditions; relocates from intracellular membranes to perinuclear foci upon sterol depletion; redundant activator of filamentation with ECM22, up-regulating the expression of filamentous growth genes; contains a Zn[2]-Cys[6] binuclear cluster; UPC2 has a paralog, ECM22, that arose from the whole genome duplication","termid":"PBO:0087384"}


id: GO:0060832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the animal/vegetal axis in the oocyte. The animal/vegetal axis of an oocyte is defined by the placement of the nucleus in the oocyte and can sometimes be identified by the asymmetric placement of other substances such as yolk in the oocyte. The pole of the egg that is closest to the nucleus defines the animal end, with the axis passing through the nucleus.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte axis specification","termid":"GO:0007309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte animal/vegetal axis specification","termid":"GO:0060832"}


id: GO:0002459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by lymphocytes expressing specific receptors for antigen produced through a somatic diversification process that includes somatic recombination of variable lymphocyte receptors (VLR) incorporating leucine-rich repeat (LRR) domains, and allowing for enhanced responses upon subsequent exposures to the same antigen (immunological memory). Examples of this process are found in jawless fish, including the lampreys (Petromyzontidae) and hagfishes (Myxinidae).","definition_xrefs":["PMID:16373579","GOC:add","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune response based on somatic recombination of immune receptors built from leucine-rich repeat domains","synonyms":[{"name":"adaptive immune response based on somatic recombination of VLR built from LRR domains","type":"exact"},{"name":"adaptive immune response based on somatic recombination of variable lymphocyte receptors built from leucine-rich repeat domains","type":"exact"},{"name":"adaptive immune response in jawless fish","type":"exact"}],"termid":"GO:0002459"}


id: FYPO:0003864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount a specific substance measured in a cell is lower than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of substance in cell during G0","synonyms":[{"name":"decreased accumulation of substance in cell during G0","type":"related"},{"name":"decreased level of substance in cell during cell quiescence","type":"exact"},{"name":"decreased level of substance in cell during quiescence","type":"exact"},{"name":"decreased substance level during G0","type":"exact"},{"name":"reduced level of substance in cell during G0","type":"exact"}],"termid":"FYPO:0003864"}


id: PBO:0109626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTLV-1 related endogenous sequence (pseudogene)","termid":"PBO:0109626"}


id: PBO:0049821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC11 antisense RNA 1","termid":"PBO:0049821"}


id: GO:0072060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the outer medullary collecting duct over time, from its formation to the mature structure. The outer medullary collecting duct is the portion of the collecting duct that lies in the renal outer medulla.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collecting duct development","termid":"GO:0072044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer medullary collecting duct development","termid":"GO:0072060"}


id: PBO:0036250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-2,6-bisphosphatase, human TIGAR ortholog (predicted)","termid":"PBO:0036250"}


id: GO:0030724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the fusome of testicular cells, an organelle derived from the spectrosome.","definition_xrefs":["GOC:mah","GOC:jl","ISBN:0879694238","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusome organization","termid":"GO:0045478"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"testicular fusome organization","synonyms":[{"name":"testicular fusome organisation","type":"exact"},{"name":"testicular fusome organization and biogenesis","type":"related"}],"termid":"GO:0030724"}


id: GO:0002507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that directly activates any of the steps required for tolerance, a physiologic state in which the immune system does not react destructively against the components of an organism that harbors it or against antigens that are introduced to it.","definition_xrefs":["GO_REF:0000022","GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"immune system development","termid":"GO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction","termid":"GO:0002507"}


id: MONDO:0004280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"motor nerve neuritis","termid":"MONDO:0004004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"asymmetric motor neuropathy","secondary_identifiers":["NCIT:C27953","MEDGEN:231082","UMLS:C1332341","DOID:7559"],"termid":"MONDO:0004280","xrefs":{"Monarch":{"xref_id":"0004280"}}}


id: MONDO:0016315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucopolysaccharidosis type 2 (MPS2), severe form (MPS2S), is associated with a massive accumulation of glycosaminoglycans and a wide variety of symptoms including a rapidly progressive cognitive decline; it is most often fatal in the second or third decade.","definition_xrefs":["Orphanet:217085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 2","termid":"MONDO:0010674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"mucopolysaccharidosis type 2, severe form","secondary_identifiers":["NANDO:2201173","SCTID:73146005","UMLS:C0342841","NANDO:1200098","GARD:17118","MEDGEN:575246"],"synonyms":[{"name":"Hunter syndrome type A","type":"exact"},{"name":"MPS2A","type":"exact"},{"name":"MPSIIA","type":"exact"},{"name":"iduronate 2-sulfatase deficiency type A","type":"exact"},{"name":"mucopolysaccharidosis type 2, severe form","type":"exact"},{"name":"mucopolysaccharidosis type 2A","type":"exact"},{"name":"mucopolysaccharidosis type II, severe form","type":"exact"},{"name":"mucopolysaccharidosis type IIA","type":"exact"}],"termid":"MONDO:0016315","xrefs":{"Monarch":{"xref_id":"0016315"}}}


id: FYPO:0004171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell that is subject to glucose starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during glucose starvation","synonyms":[{"name":"normal RNA accumulation during glucose starvation","type":"related"},{"name":"normal RNA level during cellular response to glucose starvation","type":"exact"},{"name":"normal RNA level during glucose depletion","type":"exact"},{"name":"normal RNA level during glucose deprivation","type":"exact"},{"name":"normal RNA level during glucose limitation","type":"related"},{"name":"normal cellular RNA level during glucose starvation","type":"exact"},{"name":"normal mRNA level during glucose starvation","type":"narrow"},{"name":"normal transcript level during glucose starvation","type":"exact"}],"termid":"FYPO:0004171"}


id: PBO:0087120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger ubiquitin ligase (E3); involved in ubiquitination and degradation of excess histones; interacts with Ubc4p and Rad53p; null mutant sensitive to hydroxyurea (HU)","termid":"PBO:0087120"}


id: GO:0075213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont transmembrane receptor-mediated cAMP signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transmembrane receptor-mediated cAMP signal transduction in response to host (obsolete GO:0075213)","synonyms":[{"name":"negative regulation of symbiont transmembrane receptor-mediated cAMP signal transduction in response to host","type":"exact"}],"termid":"GO:0075213"}


id: PBO:0031058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores_and_divided_germinated_spores_(obsolete_FYPO:0000319)","termid":"PBO:0031058"}


id: GO:1901522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in cellular response to chemical stimulus.","definition_xrefs":["PMID:22840777","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus (obsolete GO:1901522)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"}],"termid":"GO:1901522"}


id: GO:0052575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a carbohydrate is transported to, or maintained in, a specific location. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule localization","termid":"GO:0033036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"carbohydrate localization","synonyms":[{"name":"carbohydrate localisation","type":"exact"}],"termid":"GO:0052575"}


id: PR:O36030
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup37 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C4F10.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.18","synonyms":[{"name":"Spom972h-nup37","type":"exact"}],"termid":"PR:O36030"}


id: GO:0004531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products.","definition_xrefs":["EC:3.1.22.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787","GO:0140097"],"is_obsolete":false,"name":"deoxyribonuclease II activity","secondary_identifiers":["MetaCyc:3.1.22.1-RXN"],"synonyms":[{"name":"DNase II activity","type":"related"},{"name":"acid DNase activity","type":"related"},{"name":"acid deoxyribonuclease activity","type":"related"},{"name":"deoxyribonucleate 3'-nucleotidohydrolase activity","type":"related"},{"name":"lysosomal DNase II activity","type":"narrow"},{"name":"pancreatic DNase II","type":"related"}],"termid":"GO:0004531"}


id: MOD:00594
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified resiues with a mass of 113.047678 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 113.0-113.1 Da","termid":"MOD:00624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 113.047678 Da","termid":"MOD:00594"}


id: FYPO:0003637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ADP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ADP binding","termid":"FYPO:0003637"}


id: MONDO:0014456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive severe congenital neutropenia","termid":"MONDO:0028226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive severe congenital neutropenia due to JAGN1 deficiency","secondary_identifiers":["GARD:17702","MEDGEN:863391","UMLS:C4014954","DOID:0112134","OMIM:616022","Orphanet:423384"],"synonyms":[{"name":"SCN6","type":"related"},{"name":"neutropenia, severe congenital, 6, autosomal recessive","type":"related"}],"termid":"MONDO:0014456","xrefs":{"Monarch":{"xref_id":"0014456"}}}


id: PBO:0087251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; associates with TORC1 and likely involved in TOR signaling cascades; negative regulator of autophagy; nuclear translocation required for haploid filamentous growth; regulates filamentous growth induced nuclear translocation of Bcy1p, Fus3p, and Sks1p; overproduction causes allele-specific suppression of prp20-10; protein abundance increases in response to DNA replication stress","termid":"PBO:0087251"}


id: GO:0120539
data:
  {"annotated_genes":["SJAG_00721"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89421],"is_not":false,"summary":null,"term":"GO:0120539"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 4-hydroxy-3-methoxy-5-(all-trans-polyprenyl)benzoate + H+ = a 2-methoxy-6-(all-trans-polyprenyl)phenol + CO2.","definition_xrefs":["PMID:38425362","RHEA:81179","PMID:38295803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00721":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120539","terms_by_termid":{"GO:0120539":null}}


id: PBO:0077122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMP metallopeptidase inhibitor 1","termid":"PBO:0077122"}


id: MONDO:0021012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"visceral leishmaniasis","termid":"MONDO:0005445"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to visceral leishmaniasis, 1","secondary_identifiers":["MEDGEN:370034","OMIM:608207","UMLS:C1969520"],"synonyms":[{"name":"KAZA1","type":"exact"},{"name":"kala-Azar, susceptibility to, 1","type":"exact"},{"name":"leishmaniasis, visceral, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0021012","xrefs":{"Monarch":{"xref_id":"0021012"}}}


id: GO:0034069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + aminoglycoside = CoA + N-acetylaminoglycoside.","definition_xrefs":["GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"aminoglycoside N-acetyltransferase activity","synonyms":[{"name":"kanamycin acetyltransferase activity","type":"narrow"}],"termid":"GO:0034069"}


id: FYPO:0002742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Iron transport RNAs are transcribed from genes whose products are involved in iron transport.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased level of iron transport gene mRNA during vegetative growth","synonyms":[{"name":"increased iron transport gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of iron transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of iron transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of iron transport gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0002742"}


id: PBO:0046843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 6","termid":"PBO:0046843"}


id: GO:0019955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity.","definition_xrefs":["GOC:ai","GOC:bf","ISBN:0198599471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"cytokine binding","secondary_identifiers":["GO:0019965"],"synonyms":[{"name":"IL binding","type":"narrow"},{"name":"interleukin binding","type":"narrow"}],"termid":"GO:0019955"}


id: MONDO:0005274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0005274 (obsolete MONDO:0005274)","termid":"MONDO:0005274","xrefs":{"Monarch":{"xref_id":"0005274"}}}


id: PBO:0076093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stum, mechanosensory transduction mediator homolog","termid":"PBO:0076093"}


id: MONDO:0016830
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85682,85681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"}]},"cv_name":"mondo","definition":"Emery-Dreifuss muscular dystrophy (EDMD) is characterized by muscular weakness and atrophy, with early joint contractures and cardiomyopathy.","definition_xrefs":["Orphanet:261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0410189","DOID:11726","icd11.foundation:749295636","NORD:1084","MEDGEN:96078","MESH:D020389","GARD:6329","OMIMPS:310300","SCTID:111508004","NANDO:1200492","NANDO:2200857","NCIT:C84685"],"synonyms":[{"name":"EDMD","type":"exact"},{"name":"Emery Dreifuss Muscular Dystrophy","type":"exact"},{"name":"Emery-Dreifuss muscular dystrophy","type":"exact"},{"name":"Humeroperoneal neuromuscular disease, (formerly)","type":"related"},{"name":"scapuloperoneal syndrome, X-linked (formerly)","type":"related"}],"termid":"MONDO:0016830","terms_by_termid":{"MONDO:0008409":null},"xrefs":{"Monarch":{"xref_id":"0016830"}}}


id: PBO:0070419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPAP3 divergent transcript","termid":"PBO:0070419"}


id: PATO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in an entire population or part of a population.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"population quality","termid":"PATO:0002003"}


id: PBO:0055828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 3","termid":"PBO:0055828"}


id: GO:0002943
data:
  {"annotated_genes":["SJAG_01041","SJAG_03236","SJAG_00174","SJAG_03240"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60563,64738,65754,74283],"is_not":false,"summary":null,"term":"GO:0002943"}]},"cv_name":"biological_process","definition":"The process whereby a uridine in a transfer RNA is converted to dihydrouridine.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_01041":null,"SJAG_03236":null,"SJAG_03240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA dihydrouridine synthesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000108":null},"termid":"GO:0002943","terms_by_termid":{"GO:0002943":null}}


id: MONDO:0018314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare monogenic disease with infantile-onset pharmacoresistant focal seizures of mesial temporal lobe onset manifesting with unresponsiveness, hypertonia and automatisms and cognitive regression soon after seizure onset leading to severe intellectual disability with behavioral abnormalities.","definition_xrefs":["Orphanet:391316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"infantile-onset mesial temporal lobe epilepsy with severe cognitive regression","secondary_identifiers":["MEDGEN:1654958","UMLS:C4750853","GARD:21619"],"termid":"MONDO:0018314","xrefs":{"Monarch":{"xref_id":"0018314"}}}


id: GO:0150103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A neuroinflammatory response, occurring over several days, during which glial cells undergo nonspecific reactive changes in response to damage to the central nervous system (CNS); typically involves the proliferation or hypertrophy of different types of glial cells.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:24462092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroinflammatory response","termid":"GO:0150076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reactive gliosis","synonyms":[{"name":"gliosis","type":"broad"}],"termid":"GO:0150103"}


id: SO:0001016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A purine-rich sequence in the group I introns which determines the locations of the splice sites in group I intron splicing and has catalytic activity.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"},{"relation_name":"part_of","term_name":"group_I_intron","termid":"SO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_guide_sequence","synonyms":[{"name":"IGS","type":"exact"},{"name":"internal guide sequence","type":"exact"}],"termid":"SO:0001016"}


id: PBO:0083015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defining member of the SET3 histone deacetylase complex; which is a meiosis-specific repressor of sporulation genes; necessary for efficient transcription by RNAPII; one of two yeast proteins that contains both SET and PHD domains; SET3 has a paralog, SET4, that arose from the whole genome duplication","termid":"PBO:0083015"}


id: GO:0106195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic anions linked to oxidoreductase reactions.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic anions linked to oxidoreductase reactions (obsolete GO:0106195)","termid":"GO:0106195"}


id: PBO:0079996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 34","termid":"PBO:0079996"}


id: GO:0009812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavonoids, a group of water-soluble phenolic derivatives containing a flavan skeleton including flavones, flavonols and flavanoids, and anthocyanins.","definition_xrefs":["GOC:tair_curators","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonoid metabolic process","synonyms":[{"name":"flavonoid metabolism","type":"exact"}],"termid":"GO:0009812"}


id: GO:0075074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont spore digests parts of its own cytoplasm, occurring when the appressorium forms on or near the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete spore autophagy involved in appressorium formation on or near host (obsolete GO:0075074)","synonyms":[{"name":"autophagy of spores during appressorium formation on or near host","type":"exact"},{"name":"spore autophagy during appressorium formation on or near host","type":"related"}],"termid":"GO:0075074"}


id: PBO:0090732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQGAP domain cytoskeleton scaffold protein Rng2","termid":"PBO:0090732"}


id: MONDO:0023042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia margarita type","secondary_identifiers":["GARD:2050"],"termid":"MONDO:0023042","xrefs":{"Monarch":{"xref_id":"0023042"}}}


id: GO:0071362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ether stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ether","termid":"GO:0071362"}


id: GO:0051273
data:
  {"annotated_genes":["SJAG_03646","SJAG_02590","SJAG_04462","SJAG_01787","SJAG_01171","SJAG_03705","SJAG_02222","SJAG_03123","SJAG_04771","SJAG_05285","SJAG_04073","SJAG_03587","SJAG_00218","SJAG_04666","SJAG_01453","SJAG_01288","SJAG_00876","SJAG_01290","SJAG_05001","SJAG_02192","SJAG_01835","SJAG_04509","SJAG_02446","SJAG_01255","SJAG_04483","SJAG_04668","SJAG_04659","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63285,76623,74944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[94257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[72800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[75578,74287,91390,70582,115612,105904,112954,72802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[77977,102438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[101741,101740,107862,94895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[92216,87308],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[87686],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[105717,92200,105146,117705,117830,102639,90563],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01171":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"beta-glucan metabolism","type":"exact"}],"termid":"GO:0051273","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: MONDO:0009016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The deposition of calcium on the cornea, resulting in pain and decreased visual acuity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal degeneration","termid":"MONDO:0001515"},{"relation_name":"is_a","term_name":"keratopathy","termid":"MONDO:0002261"},{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"band keratopathy","secondary_identifiers":["MEDGEN:56354","NCIT:C118765","ICD9:371.43","OMIM:217500","SCTID:35055000","UMLS:C0155120","MESH:C562399","DOID:11164","icd11.foundation:184627034"],"synonyms":[{"name":"band keratopathy","type":"exact"},{"name":"band-shaped keratopathy","type":"exact"},{"name":"corneal dystrophy, band-SHAPED","type":"related"}],"termid":"MONDO:0009016","xrefs":{"Monarch":{"xref_id":"0009016"}}}


id: PBO:0048524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein overexpressed in skeletal muscle","termid":"PBO:0048524"}


id: GO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows zygotene during prophase I of meiosis, and during which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007128"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007128"],"is_obsolete":false,"name":"pachytene","secondary_identifiers":["Wikipedia:Pachytene","Wikipedia:Meiosis#Pachytene"],"termid":"GO:0000239"}


id: PBO:0004423
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ace2 target genes","termid":"PBO:0004423"}


id: PBO:0034764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex ubiquitin conjugating enzyme E2 Ubc7","termid":"PBO:0034764"}


id: PBO:0053694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 892","termid":"PBO:0053694"}


id: FYPO:0005540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of telomerase RNA reverse transcriptase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal telomerase RNA reverse transcriptase activity","termid":"FYPO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000707","FYPO:0000652","FYPO:0005447","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased telomerase RNA reverse transcriptase activity","synonyms":[{"name":"decreased telomerase activity","type":"broad"},{"name":"reduced telomerase RNA reverse transcriptase activity","type":"exact"}],"termid":"FYPO:0005540"}


id: MONDO:0020617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--ok (obsolete MONDO:0020617)","secondary_identifiers":["OMIM:111380"],"synonyms":[{"name":"BLOOD GROUP--OK","type":"related"},{"name":"OK","type":"related"},{"name":"blood group, OK","type":"exact"}],"termid":"MONDO:0020617","xrefs":{"Monarch":{"xref_id":"0020617"}}}


id: PBO:0005310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-B (predicted)","termid":"PBO:0005310"}


id: MONDO:0009214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi anemia caused by mutations of the FANCD2 gene. This gene is involved in the repair of DNA double-strand breaks, both by homologous recombination and single-strand annealing.","definition_xrefs":["NCIT:C125706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0021190","MONDO:0005066","MONDO:0002280"],"is_obsolete":false,"name":"Fanconi anemia complementation group D2","secondary_identifiers":["OMIM:227646","GARD:15169","UMLS:C3160738","DOID:0111083","MEDGEN:463627"],"synonyms":[{"name":"FA4","type":"exact"},{"name":"FAD2","type":"exact"},{"name":"FANCD2","type":"exact"},{"name":"Fad2","type":"related"},{"name":"Fanconi Anemia, complementation group D","type":"related"},{"name":"Fanconi anemia complementation group D2","type":"exact"},{"name":"Fanconi anemia, complementation group D2","type":"related"},{"name":"Fanconi pancytopenia type 4","type":"exact"},{"name":"Fanconi pancytopenia, type 4","type":"related"}],"termid":"MONDO:0009214","xrefs":{"Monarch":{"xref_id":"0009214"}}}


id: FYPO:0001643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of tryptophan measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular tryptophan level","synonyms":[{"name":"normal cellular tryptophan level during mitotic cell cycle","type":"related"},{"name":"normal cellular tryptophan level during vegetative growth","type":"exact"},{"name":"normal level of tryptophan in cell","type":"exact"}],"termid":"FYPO:0001643"}


id: FYPO:0002179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which a microcolony forms, all cells in the population are inviable and have abnormal morphology (i.e. size, shape, or structure), some cells may divide, and some cells are longer than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population, vegetative cells with abnormal morphology, including long cells (obsolete FYPO:0002179)","synonyms":[{"name":"inviable microcolony of vegetative cells with abnormal morphology, including long cells","type":"exact"}],"termid":"FYPO:0002179"}


id: PBO:0030610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_calcium_level","termid":"PBO:0030610"}


id: MONDO:0011606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Achondroplasia","termid":"MONDO:0007037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"baby rattle pelvis dysplasia","secondary_identifiers":["OMIM:605838","UMLS:C1853911","MESH:C537794","MEDGEN:340083","GARD:9289","MESH:C565282"],"synonyms":[{"name":"baby rattle pelvic dysplasia","type":"related"},{"name":"baby rattle pelvis dysplasia","type":"exact"}],"termid":"MONDO:0011606","xrefs":{"Monarch":{"xref_id":"0011606"}}}


id: GO:0033884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: O-phosphoethanolamine + H2O = ethanolamine + phosphate, and phosphocholine + H2O = choline + phosphate.","definition_xrefs":["EC:3.1.3.75"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphoethanolamine/phosphocholine phosphatase activity (obsolete GO:0033884)","synonyms":[{"name":"phosphoethanolamine/phosphocholine phosphatase activity","type":"exact"}],"termid":"GO:0033884"}


id: MONDO:0006245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma with apocrine and less often eccrine differentiation, arising from the sweat glands. It usually presents as a solitary slow growing nodule in the dermis or subcutaneous tissues. It is characterized by a nodular growth pattern and it is often associated with necrotic changes.","definition_xrefs":["NCIT:C54664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"sweat gland carcinoma","termid":"MONDO:0005524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"hidradenocarcinoma","secondary_identifiers":["MEDGEN:137746","EFO:1000295","ICDO:8402/3","UMLS:C0334344"],"synonyms":[{"name":"clear cell eccrine carcinoma","type":"exact"},{"name":"hidradenocarcinoma","type":"exact"}],"termid":"MONDO:0006245","xrefs":{"Monarch":{"xref_id":"0006245"}}}


id: GO:0048319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the axial mesoderm are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm morphogenesis","termid":"GO:0048332"},{"relation_name":"part_of","term_name":"axial mesoderm development","termid":"GO:0048318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesoderm morphogenesis","termid":"GO:0048319"}


id: MONDO:1012102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic hepatic fibrosis, non-human animal","termid":"MONDO:1011775"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic hepatic fibrosis, dog","secondary_identifiers":["OMIA:000454-9615"],"termid":"MONDO:1012102","xrefs":{"Monarch":{"xref_id":"1012102"}}}


id: PBO:0085948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant displays elevated frequency of mitochondrial genome loss","termid":"PBO:0085948"}


id: GO:1901364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving funalenone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"funalenone metabolic process","synonyms":[{"name":"funalenone metabolism","type":"exact"}],"termid":"GO:1901364"}


id: PBO:0048265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 3","termid":"PBO:0048265"}


id: GO:0008520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-ascorbate(out) + Na+(out) = L-ascorbate(in) + Na+(in).","definition_xrefs":["GOC:mah","PMID:18094143","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-ascorbate:sodium symporter activity","secondary_identifiers":["RHEA:69883","TC:2.A.40.6.1","GO:0070890"],"synonyms":[{"name":"sodium-dependent L-ascorbate transmembrane transporter activity","type":"related"},{"name":"sodium-dependent L-ascorbic acid transporter","type":"related"}],"termid":"GO:0008520"}


id: PBO:0004090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose 4-epimerase Uge1","termid":"PBO:0004090"}


id: FYPO:0000704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another is abnormal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-protein interaction phenotype","termid":"FYPO:0000702"},{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal protein-protein interaction","synonyms":[{"name":"abnormal protein binding","type":"exact"}],"termid":"FYPO:0000704"}


id: PBO:0026644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G2_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0026644"}


id: MONDO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe combined immunodeficiency that is the result of a mutation on Chromosome 6 RAG1 gene involving genetic rearrangement of both the T- and B-lymphocyte receptor genes.","definition_xrefs":["DOID:0060011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"recombinase activating gene 1 deficiency","synonyms":[{"name":"recombinase activating gene 1 deficiency","type":"exact"}],"termid":"MONDO:0000572","xrefs":{"Monarch":{"xref_id":"0000572"}}}


id: PBO:0083561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene SLM3/YDL033C; YDL032W is not an essential gene","termid":"PBO:0083561"}


id: MONDO:0008274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrous dysplasia affecting more than one bone. When it is associated with café-au-lait skin pigmentation and endocrine disorders, it is known as McCune-Albright syndrome.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrous dysplasia","termid":"MONDO:0000845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyostotic fibrous dysplasia","secondary_identifiers":["UMLS:C0016065","GARD:4213","NCIT:C34610","icd11.foundation:771587091","Orphanet:93276","SCTID:36517007","MedDRA:10036120","ICD10CM:Q78.1","ICD9:756.54","MEDGEN:5180","MESH:D005359"],"synonyms":[{"name":"PFD","type":"exact"},{"name":"fibrous dysplasia of bone","type":"broad"},{"name":"polyostotic fibrous dysplasia of bone","type":"exact"}],"termid":"MONDO:0008274","xrefs":{"Monarch":{"xref_id":"0008274"}}}


id: PBO:0108943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 22","termid":"PBO:0108943"}


id: PBO:0058286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4662a","termid":"PBO:0058286"}


id: MONDO:0008067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopharyngeal carcinoma, susceptibility to, 2","secondary_identifiers":["UMLS:C2750548","MEDGEN:413336","OMIM:161550"],"synonyms":[{"name":"NPCA2","type":"related"},{"name":"Npca2","type":"related"},{"name":"nasopharyngeal carcinoma, susceptibility to, 2","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0008067","xrefs":{"Monarch":{"xref_id":"0008067"}}}


id: GO:0052757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of hexosaminic linkages in chondroitin, a linear polymer structure composed of the repeating disaccharide unit [->4)-D-glucuronic acid-(1->3)-N-acetyl-D-galactosamine-(1-], also written as [->4GlcUA1->3GalNAc1-].","definition_xrefs":["PMID:18390555","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endogalactosaminidase activity","termid":"GO:0033931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"chondroitin hydrolase activity","synonyms":[{"name":"chondroitin endo-beta-galactosaminidase activity","type":"exact"}],"termid":"GO:0052757"}


id: PBO:0080049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP21 pseudogene 1","termid":"PBO:0080049"}


id: PR:P36589
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc14 gene.","definition_xrefs":["UniProtKB:P36589","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.07","synonyms":[{"name":"Spom972h-cdc14","type":"exact"}],"termid":"PR:P36589"}


id: GO:0035136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb morphogenesis","termid":"GO:0035108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forelimb morphogenesis","secondary_identifiers":["GO:0035140"],"synonyms":[{"name":"arm morphogenesis","type":"narrow"}],"termid":"GO:0035136"}


id: GO:0045840
data:
  {"annotated_genes":["SJAG_02169","SJAG_04259","SJAG_02380","SJAG_03681","SJAG_00666","SJAG_01297","SJAG_02451","SJAG_01805","SJAG_00883","SJAG_02336","SJAG_04968","SJAG_01679","SJAG_03353","SJAG_03126","SJAG_02498","SJAG_03048","SJAG_04573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103686,90516,113570,107029,108049,99392,111752,115693,114058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[93994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[97494,93601,102176,111169,99941,101905,114562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic nuclear division","termid":"GO:0007088"},{"relation_name":"is_a","term_name":"positive regulation of nuclear division","termid":"GO:0051785"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitosis","type":"narrow"},{"name":"mitogenic activity","type":"narrow"},{"name":"positive regulation of mitosis","type":"exact"},{"name":"stimulation of mitosis","type":"narrow"},{"name":"up regulation of mitosis","type":"exact"},{"name":"up-regulation of mitosis","type":"exact"},{"name":"upregulation of mitosis","type":"exact"}],"termid":"GO:0045840","terms_by_termid":{"GO:0045842":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0039321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 12-lipoxygenase, 12S type","termid":"PBO:0039321"}


id: GO:0070925
data:
  {"annotated_genes":["SJAG_03798","SJAG_00572","SJAG_01297","SJAG_02749","SJAG_02336","SJAG_03458","SJAG_01561","SJAG_02870","SJAG_03062","SJAG_04841","SJAG_03496","SJAG_03460","SJAG_01283","SJAG_04066","SJAG_02441","SJAG_03846","SJAG_02663","SJAG_00882","SJAG_02759","SJAG_01548","SJAG_02952","SJAG_04059","SJAG_00718","SJAG_01169","SJAG_00114","SJAG_03162","SJAG_01837","SJAG_03609","SJAG_04745","SJAG_02414","SJAG_16457","SJAG_05289","SJAG_02436","SJAG_02683","SJAG_01613","SJAG_04177","SJAG_03116","SJAG_01317","SJAG_00856","SJAG_01339","SJAG_04294","SJAG_03073","SJAG_00323","SJAG_04998","SJAG_01606","SJAG_01537","SJAG_02427","SJAG_07018","SJAG_04464","SJAG_06309","SJAG_05017","SJAG_03835","SJAG_01251","SJAG_04918","SJAG_02184","SJAG_02508","SJAG_02840","SJAG_05321","SJAG_02980","SJAG_04256","SJAG_00523","SJAG_01161","SJAG_04395","SJAG_02535","SJAG_02332","SJAG_00645","SJAG_02479","SJAG_03424","SJAG_01224","SJAG_01811","SJAG_02664","SJAG_02465","SJAG_05679","SJAG_03773","SJAG_01467","SJAG_01296","SJAG_04108","SJAG_04638","SJAG_01546","SJAG_00663","SJAG_00513","SJAG_02045","SJAG_04655","SJAG_00773","SJAG_04992","SJAG_02390","SJAG_03155","SJAG_01568","SJAG_04746","SJAG_01180","SJAG_03540","SJAG_02640","SJAG_04492","SJAG_02477","SJAG_02699","SJAG_03220","SJAG_03617","SJAG_02754","SJAG_00004","SJAG_04232","SJAG_00029","SJAG_04640","SJAG_01876","SJAG_02246","SJAG_02761","SJAG_03023","SJAG_02213","SJAG_00689","SJAG_02638","SJAG_03466","SJAG_01122","SJAG_01420","SJAG_04180","SJAG_03048","SJAG_03080","SJAG_04049","SJAG_04502","SJAG_04901","SJAG_01274","SJAG_02340","SJAG_02335","SJAG_04004","SJAG_03217","SJAG_02830","SJAG_03100","SJAG_00229","SJAG_02609","SJAG_02886","SJAG_00722","SJAG_04304","SJAG_02513","SJAG_03157","SJAG_01756","SJAG_03851","SJAG_04599","SJAG_03012","SJAG_04669","SJAG_00794","SJAG_00949","SJAG_02868","SJAG_03070","SJAG_02803","SJAG_04375","SJAG_04524","SJAG_05248","SJAG_01839","SJAG_01215","SJAG_00231","SJAG_01454","SJAG_04940"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100535,97775,116442,79140,92603,98981,100395,110602,118694,102316,103301,92182,111933,112692,115569,93009,105802,111236,115570,100203,89412,107232,108803],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[78567,70553,70213,71875,104403,80183,71271,60099,76701,73052,71970,72409,76456,79381,79526,78232,92706,94419,103381,72066,79504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000045"},{"annotations":[102317,104602,96862,99265,91891,104075,87438,94629,97776,103924,110528,116366,103845,116365,105018,110529],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180023"},{"annotations":[95659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042256"},{"annotations":[95101,77505,75484],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[79615,90572,64303,105278,57119,66406,65926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051382"},{"annotations":[62254,110780,113975,118674,88557,111854,94443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140042"},{"annotations":[94564,96565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090306"},{"annotations":[101234,99027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140642"},{"annotations":[73812,99028,102843,96566],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[108180,101088],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902775"},{"annotations":[111783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061668"},{"annotations":[109402,100789,96667,110378,118459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090307"},{"annotations":[97082,98425,99659,103693,100187,108058,101239],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[99034,101240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140641"},{"annotations":[76845,108652,94568,97083,99035],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[117744],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905560"},{"annotations":[112679,92348,72913,75757,71496,74151,76442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033962"},{"annotations":[108451,108361],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000786"},{"annotations":[89437,102171,116466],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905561"},{"annotations":[111230],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0110161"},{"annotations":[71189],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901673"},{"annotations":[65877,70882,71987,72059,72601],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000027"},{"annotations":[74558,71450,69620,72393,73060,76383,76889,73242,74399,74294,73332,76976,69805,71753,74565,94552,75001,118403,89722,76375],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000028"},{"annotations":[108501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042255"},{"annotations":[72138,99919,103714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000921"},{"annotations":[112861,72781],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034462"},{"annotations":[78121,116988,106248,70387,99888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051225"},{"annotations":[76443,72370,78680,113117,72914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034063"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an organelle. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":150,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00029":null,"SJAG_00114":null,"SJAG_00229":null,"SJAG_00231":null,"SJAG_00323":null,"SJAG_00513":null,"SJAG_00523":null,"SJAG_00572":null,"SJAG_00645":null,"SJAG_00663":null,"SJAG_00689":null,"SJAG_00718":null,"SJAG_00722":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00856":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01169":null,"SJAG_01180":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01296":null,"SJAG_01297":null,"SJAG_01317":null,"SJAG_01339":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01467":null,"SJAG_01537":null,"SJAG_01546":null,"SJAG_01548":null,"SJAG_01561":null,"SJAG_01568":null,"SJAG_01606":null,"SJAG_01613":null,"SJAG_01756":null,"SJAG_01811":null,"SJAG_01837":null,"SJAG_01839":null,"SJAG_01876":null,"SJAG_02045":null,"SJAG_02184":null,"SJAG_02213":null,"SJAG_02246":null,"SJAG_02332":null,"SJAG_02335":null,"SJAG_02336":null,"SJAG_02340":null,"SJAG_02390":null,"SJAG_02414":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02441":null,"SJAG_02465":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02508":null,"SJAG_02513":null,"SJAG_02535":null,"SJAG_02609":null,"SJAG_02638":null,"SJAG_02640":null,"SJAG_02663":null,"SJAG_02664":null,"SJAG_02683":null,"SJAG_02699":null,"SJAG_02749":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02761":null,"SJAG_02803":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02870":null,"SJAG_02886":null,"SJAG_02952":null,"SJAG_02980":null,"SJAG_03012":null,"SJAG_03023":null,"SJAG_03048":null,"SJAG_03062":null,"SJAG_03070":null,"SJAG_03073":null,"SJAG_03080":null,"SJAG_03100":null,"SJAG_03116":null,"SJAG_03155":null,"SJAG_03157":null,"SJAG_03162":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03424":null,"SJAG_03458":null,"SJAG_03460":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03540":null,"SJAG_03609":null,"SJAG_03617":null,"SJAG_03773":null,"SJAG_03798":null,"SJAG_03835":null,"SJAG_03846":null,"SJAG_03851":null,"SJAG_04004":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04177":null,"SJAG_04180":null,"SJAG_04232":null,"SJAG_04256":null,"SJAG_04294":null,"SJAG_04304":null,"SJAG_04375":null,"SJAG_04395":null,"SJAG_04464":null,"SJAG_04492":null,"SJAG_04502":null,"SJAG_04524":null,"SJAG_04599":null,"SJAG_04638":null,"SJAG_04640":null,"SJAG_04655":null,"SJAG_04669":null,"SJAG_04745":null,"SJAG_04746":null,"SJAG_04841":null,"SJAG_04901":null,"SJAG_04918":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_04998":null,"SJAG_05017":null,"SJAG_05248":null,"SJAG_05289":null,"SJAG_05321":null,"SJAG_05679":null,"SJAG_06309":null,"SJAG_07018":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"organelle assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0070925","terms_by_termid":{"GO:0000027":null,"GO:0000028":null,"GO:0000045":null,"GO:0000073":null,"GO:0000921":null,"GO:0033962":null,"GO:0034063":null,"GO:0034462":null,"GO:0042255":null,"GO:0042256":null,"GO:0051225":null,"GO:0051256":null,"GO:0051382":null,"GO:0061668":null,"GO:0061804":null,"GO:0090306":null,"GO:0090307":null,"GO:0110161":null,"GO:0140042":null,"GO:0140641":null,"GO:0140642":null,"GO:0180023":null,"GO:1901673":null,"GO:1902626":null,"GO:1902775":null,"GO:1905560":null,"GO:1905561":null,"GO:1990810":null,"GO:2000786":null}}


id: FYPO:0004919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a molecular function is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal regulation of molecular function","synonyms":[{"name":"normal regulation of molecular function during mitotic cell cycle","type":"related"},{"name":"normal regulation of molecular function during vegetative growth","type":"exact"}],"termid":"FYPO:0004919"}


id: GO:0042777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ATP driven by transport of protons across a plasma membrane to generate an electrochemical gradient (proton-motive force).","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton motive force-driven ATP synthesis","termid":"GO:0015986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"proton motive force-driven plasma membrane ATP synthesis","synonyms":[{"name":"ATP synthesis coupled proton transport","type":"related"},{"name":"plasma membrane ATP synthesis coupled proton transport","type":"related"}],"termid":"GO:0042777"}


id: GO:0016286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel with a unit conductance of 2 to 20 picoSiemens that opens in response to stimulus by internal calcium ions. Small conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:mtg_transport","OMIM:602754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated potassium channel activity","termid":"GO:0015269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"small conductance calcium-activated potassium channel activity","synonyms":[{"name":"SK KCa channels","type":"exact"},{"name":"SK calcium-activated potassium channel activity","type":"exact"},{"name":"small conductance KCa channels","type":"exact"}],"termid":"GO:0016286"}


id: GO:0042040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of a metal into a metallo-molybdopterin complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metal incorporation into metallo-molybdopterin complex","termid":"GO:0042040"}


id: PBO:0057021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 122","termid":"PBO:0057021"}


id: PBO:0046773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosin glycosyltransferase 1","termid":"PBO:0046773"}


id: GO:0097408
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cellular inclusion consisting of circular areas filled with fine slender filaments about 10 nanometers in diameter, delimited by a wall of varying complexity (either a single continuous membrane or a tubular network consisting of a fine filamentous material giving the wall a honeycomb appearance). Fibrillary inclusions are found in the cytoplasm of giant cells of Dieters in the lateral vestibular nucleus of the rat; similar structures have been described in the ventral cochlear nucleus, spinal cord, and substantia nigra.","definition_xrefs":["NIF_Subcellular:sao967812059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"fibrillary inclusion","termid":"GO:0097408"}


id: PBO:0001071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine deaminase subunit Tad3","termid":"PBO:0001071"}


id: PBO:0044465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily X member 1","termid":"PBO:0044465"}


id: PBO:0076482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAR (HIV-1) RNA binding protein 1","termid":"PBO:0076482"}


id: MOD:01334
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 6x(13)C labeled L-lysine.","definition_xrefs":["OMSSA:138","PubMed:11857757","PubMed:12716131","PubMed:11999733","Unimod:188#K","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-lysine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"},{"name":"lys-13c6","type":"exact"}],"termid":"MOD:01334"}


id: GO:0006216
data:
  {"annotated_genes":["SJAG_01673","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69702,69542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cytidine, cytosine riboside, a widely distributed nucleoside.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidine metabolic process","termid":"GO:0046087"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside catabolic process","termid":"GO:0046133"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01673":null,"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"cytidine catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"cytidine breakdown","type":"exact"},{"name":"cytidine catabolism","type":"exact"},{"name":"cytidine degradation","type":"exact"}],"termid":"GO:0006216","terms_by_termid":{"GO:0009972":null}}


id: GO:0061128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of DIF-2. DIF-2 is a chlorinated alkylphenone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by DIF-2","termid":"GO:0061121"},{"relation_name":"is_a","term_name":"positive regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemotaxis to cAMP by DIF-2","termid":"GO:0061128"}


id: GO:0044319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a cell along or through a wound gap that contributes to the reestablishment of a continuous surface.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"epiboly involved in wound healing","termid":"GO:0090505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing, spreading of cells","synonyms":[{"name":"cell migration involved in wound healing epiboly","type":"exact"}],"termid":"GO:0044319"}


id: GO:1904904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell-matrix adhesion via fibronectin.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:BHF_miRNA","PMID:19460962","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-matrix adhesion","termid":"GO:0001952"},{"relation_name":"regulates","term_name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell-matrix adhesion via fibronectin","termid":"GO:1904904"}


id: GO:0070794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of conidiophore development, a process that leads to the formation of a conidiophore. The conidiophore is a specialized hypha that extends aerially from the growth substrate and bears conidia, or asexual spores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conidiophore development","termid":"GO:0070793"},{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"negatively_regulates","term_name":"conidiophore development","termid":"GO:0070787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of conidiophore development","termid":"GO:0070794"}


id: PBO:0076081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small transmembrane regulator of ion transport 1","termid":"PBO:0076081"}


id: PBO:0050285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H6 family homeobox 2","termid":"PBO:0050285"}


id: MONDO:0001087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an enduring pattern of inability to establish close relationships coupled with cognitive or perceptual distortions, odd beliefs and speech, and eccentric behavior and appearance.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"personality disorder","termid":"MONDO:0002028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizotypal personality disorder","secondary_identifiers":["NCIT:C92632","MESH:D012569","DOID:10646","SCTID:31027006","UMLS:C1443045","ICD9:301.22","MEDGEN:1826899"],"termid":"MONDO:0001087","xrefs":{"Monarch":{"xref_id":"0001087"}}}


id: PBO:0067547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 693, pseudogene","termid":"PBO:0067547"}


id: PBO:0090092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, 3'-phosphoadenosine 5'-phosphosulfate/ 5'-adenylyl sulfate Mrx21","termid":"PBO:0090092"}


id: GO:1903469
data:
  {"annotated_genes":["SJAG_00400","SJAG_01884","SJAG_03780","SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88091,102742,103947,112311],"is_not":false,"summary":null,"term":"GO:1903469"}]},"cv_name":"biological_process","definition":"Any DNA replication, removal of RNA primer that is involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","PMID:1234","GO_REF:0000060","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication, removal of RNA primer","termid":"GO:0043137"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01884":null,"SJAG_03780":null,"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"removal of RNA primer involved in mitotic DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication, removal of RNA primer involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA replication, removal of RNA primer involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA replication, removal of RNA primer involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA replication, removal of RNA primer involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA replication, removal of RNA primer involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"Okazaki initiator RNA removal involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"Okazaki initiator RNA removal involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"Okazaki initiator RNA removal involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"Okazaki initiator RNA removal involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"Okazaki initiator RNA removal involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"Okazaki initiator RNA removal involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903469","terms_by_termid":{"GO:1903469":null}}


id: GO:0090237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of arachidonic acid secretion, the controlled release of arachidonic acid from a cell or a tissue.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of icosanoid secretion","termid":"GO:0032303"},{"relation_name":"regulates","term_name":"arachidonate secretion","termid":"GO:0050482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of arachidonate secretion","synonyms":[{"name":"regulation of arachidonic acid secretion","type":"exact"}],"termid":"GO:0090237"}


id: GO:0097233
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an alveolar lamellar body, a specialized secretory organelle found in type II pneumocytes and involved in the synthesis, secretion, and reutilization of pulmonary surfactant.","definition_xrefs":["GOC:sl","PMID:11940594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body membrane","termid":"GO:0097232"},{"relation_name":"part_of","term_name":"alveolar lamellar body","termid":"GO:0097208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"alveolar lamellar body membrane","termid":"GO:0097233"}


id: GO:0021669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 6. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:curators","GOC:dph","GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 6 morphogenesis","termid":"GO:0021667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 formation","termid":"GO:0021669"}


id: MONDO:0004116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the esophagus. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:C6762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"esophageal neuroendocrine tumor","termid":"MONDO:0003649"},{"relation_name":"is_a","term_name":"carcinoma of esophagus","termid":"MONDO:0019086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"esophageal small cell neuroendocrine carcinoma","secondary_identifiers":["UMLS:C1112474","DOID:7134","MEDGEN:207270"],"synonyms":[{"name":"Oat cell carcinoma of esophagus","type":"exact"},{"name":"Oat cell carcinoma of oesophagus","type":"exact"},{"name":"Oat cell carcinoma of the esophagus","type":"exact"},{"name":"Oat cell carcinoma of the oesophagus","type":"exact"},{"name":"esophageal Oat cell carcinoma","type":"exact"},{"name":"esophageal small cell NEC","type":"exact"},{"name":"esophageal small cell carcinoma","type":"exact"},{"name":"esophageal small cell neuroendocrine carcinoma","type":"exact"},{"name":"esophagus Oat cell carcinoma","type":"exact"},{"name":"esophagus small cell carcinoma","type":"exact"},{"name":"oesophagus Oat cell carcinoma","type":"exact"},{"name":"oesophagus small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of esophagus","type":"exact"},{"name":"small cell carcinoma of oesophagus","type":"exact"},{"name":"small cell carcinoma of the esophagus","type":"exact"},{"name":"small cell carcinoma of the oesophagus","type":"exact"},{"name":"small cell carcinoma, esophagus","type":"exact"},{"name":"small cell carcinoma, oesophagus","type":"exact"}],"termid":"MONDO:0004116","xrefs":{"Monarch":{"xref_id":"0004116"}}}


id: FYPO:0002095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"increased protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during cellular response to DNA damaging agent","type":"related"},{"name":"increased protein phosphorylation during response to DNA damage stimulus","type":"exact"}],"termid":"FYPO:0002095"}


id: GO:0000096
data:
  {"annotated_genes":["SJAG_00582","SJAG_04305","SJAG_00419","SJAG_00365","SJAG_00234","SJAG_00832","SJAG_03614","SJAG_03881","SJAG_00309","SJAG_04425","SJAG_02293","SJAG_04042","SJAG_03712","SJAG_03856","SJAG_04459","SJAG_01404","SJAG_03141","SJAG_03556","SJAG_02290","SJAG_01880","SJAG_03671","SJAG_02972","SJAG_04953","SJAG_03494","SJAG_02689","SJAG_03152","SJAG_03659","SJAG_00395","SJAG_01466","SJAG_00988","SJAG_03102","SJAG_00881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68270,110882,65215,105792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[72491,77187,75949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[110300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019343"},{"annotations":[117974,93109,103389,98323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006534"},{"annotations":[103417,111330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[78870,74338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050667"},{"annotations":[110301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[106404,95356,99805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[76765,78167,79065,80115,58695,77626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[74335,111762,71651,76080,70588,64051,78867,115577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[103184,112497,110461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006555"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving amino acids containing sulfur, comprising cysteine, homocysteine, methionine and selenocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00309":null,"SJAG_00365":null,"SJAG_00395":null,"SJAG_00419":null,"SJAG_00582":null,"SJAG_00832":null,"SJAG_00881":null,"SJAG_00988":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_01880":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03141":null,"SJAG_03152":null,"SJAG_03494":null,"SJAG_03556":null,"SJAG_03614":null,"SJAG_03659":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_03856":null,"SJAG_03881":null,"SJAG_04042":null,"SJAG_04305":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"sulfur amino acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-1614635"],"synonyms":[{"name":"sulfur amino acid metabolism","type":"exact"},{"name":"sulphur amino acid metabolic process","type":"exact"},{"name":"sulphur amino acid metabolism","type":"exact"}],"termid":"GO:0000096","terms_by_termid":{"GO:0006534":null,"GO:0006535":null,"GO:0006555":null,"GO:0009086":null,"GO:0019343":null,"GO:0019509":null,"GO:0050667":null,"GO:0052699":null,"GO:0071266":null,"GO:0071269":null,"GO:1990355":null}}


id: GO:0098759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-8 stimulus.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to interleukin-8","termid":"GO:0098758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-8","synonyms":[{"name":"cellular response to IL-8","type":"exact"}],"termid":"GO:0098759"}


id: MONDO:0012380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 14q11.2-q12.","definition_xrefs":["DOID:0110579","PMID:15958501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 53","secondary_identifiers":["OMIM:609965","UMLS:C1864957","MESH:C566495","GARD:9934","MEDGEN:355336"],"synonyms":[{"name":"DFNA53","type":"narrow"},{"name":"autosomal dominant deafness 53","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 53","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 53","type":"narrow"},{"name":"deafness, autosomal dominant 53","type":"narrow"},{"name":"deafness, autosomal dominant nonsyndromic sensorineural 53","type":"narrow"}],"termid":"MONDO:0012380","xrefs":{"Monarch":{"xref_id":"0012380"}}}


id: GO:0048516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Processes causing the differentiation of an epidermal cell into a trichome cell; as in, but not restricted to, the flowering plants (Magnoliophyta, ncbi_taxonomy_id:3398).","definition_xrefs":["GOC:lr"],"gene_count":0,"genotype_count":0,"name":"obsolete trichome initiation (sensu Magnoliophyta) (obsolete GO:0048516)","synonyms":[{"name":"trichome initiation (sensu Magnoliophyta)","type":"exact"}],"termid":"GO:0048516"}


id: GO:0001678
data:
  {"annotated_genes":["SJAG_04495","SJAG_03081","SJAG_00472","SJAG_02444","SJAG_00574","SJAG_04334","SJAG_04312","SJAG_01254","SJAG_01699","SJAG_04026","SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69914,75984],"is_not":false,"summary":null,"term":"GO:0001678"},{"annotations":[105706,94022,106293,106645,116353,109313,108807,101645,115323],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of glucose within a cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose homeostasis","termid":"GO:0042593"},{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular glucose homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell glucose homeostasis","type":"exact"},{"name":"cellular glucose homeostasis","type":"exact"}],"termid":"GO:0001678","terms_by_termid":{"GO:0001678":null,"GO:0010619":null}}


id: PBO:0072046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 16","termid":"PBO:0072046"}


id: PR:Q9P6J9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inner membrane metabolite transport protein YgcS that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transporter C1683.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.01","secondary_identifiers":["UniProtKB:Q9P6J9"],"synonyms":[{"name":"Spom972h-ygcS","type":"exact"}],"termid":"PR:Q9P6J9"}


id: GO:1901551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell development.","definition_xrefs":["PMID:19470579","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of endothelial cell differentiation","termid":"GO:0045602"},{"relation_name":"is_a","term_name":"regulation of endothelial cell development","termid":"GO:1901550"},{"relation_name":"negatively_regulates","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell development","synonyms":[{"name":"down regulation of endothelial cell development","type":"exact"},{"name":"down-regulation of endothelial cell development","type":"exact"},{"name":"downregulation of endothelial cell development","type":"exact"},{"name":"inhibition of endothelial cell development","type":"narrow"}],"termid":"GO:1901551"}


id: PBO:0057387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548bb","termid":"PBO:0057387"}


id: PBO:0078051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 41","termid":"PBO:0078051"}


id: MONDO:0009865
data:
  {"annotated_genes":["SJAG_02009"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85642],"is_not":false,"summary":null,"term":"MONDO:0009865"}]},"cv_name":"mondo","definition":"A rare, autosomal recessive, inherited disorder caused by mutation of the PGAM2 gene. It is characterized by non-spherocytic hemolytic anemia, exercise-induced cramping, myoglobinuria, and presence of tubular aggregates on muscle biopsy.","definition_xrefs":["NCIT:C131647"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular glycogenosis (obsolete MONDO:0016118)","termid":"MONDO:0016118"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease due to phosphoglycerate mutase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0268149","MEDGEN:120613","NANDO:1200832","GARD:9964","OMIM:261670","SCTID:61772003","MESH:C536176","Orphanet:97234"],"synonyms":[{"name":"GSD 10","type":"related"},{"name":"GSD due to phosphoglycerate mutase deficiency","type":"exact"},{"name":"GSD type 10","type":"exact"},{"name":"GSD10","type":"related"},{"name":"GSDX","type":"related"},{"name":"PGAM deficiency","type":"related"},{"name":"PGAM2 glycogen storage disease","type":"exact"},{"name":"PGAMM deficiency","type":"related"},{"name":"Phosphoglycerate mutase deficiency","type":"related"},{"name":"Phosphoglycerate mutase, muscle, deficiency of","type":"related"},{"name":"glycogen storage disease 10","type":"related"},{"name":"glycogen storage disease X","type":"related"},{"name":"glycogen storage disease caused by mutation in PGAM2","type":"exact"},{"name":"glycogen storage disease type 10","type":"exact"},{"name":"glycogenosis due to phosphoglycerate mutase deficiency","type":"exact"},{"name":"muscle phosphoglycerate mutase deficiency","type":"exact"},{"name":"myopathy due to Phosphoglycerate mutase deficiency","type":"related"},{"name":"myopathy due to phosphoglycerate mutase deficiency","type":"exact"}],"termid":"MONDO:0009865","terms_by_termid":{"MONDO:0009865":null},"xrefs":{"Monarch":{"xref_id":"0009865"}}}


id: GO:0071305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin D stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin D","termid":"GO:0033280"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin D","synonyms":[{"name":"cellular response to calciferol","type":"exact"},{"name":"cellular response to cholecalciferol","type":"narrow"},{"name":"cellular response to ergocalciferol","type":"narrow"}],"termid":"GO:0071305"}


id: PBO:0017686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb family protein, RNA polymerase I termination factor Eta2 (predicted)","termid":"PBO:0017686"}


id: MONDO:0019456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia arising de novo and not as a result of treatment. It is characterized by the presence of myelodysplastic features in at least 50% of the cells of at least two hematopoietic cell lines. Patients often present with severe cytopenia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia with multilineage dysplasia","secondary_identifiers":["GARD:12761","Orphanet:86845","icd11.foundation:1235412948","MEDGEN:224861","UMLS:C1292773","SCTID:445448008","NCIT:C9289","ICDO:9895/3"],"synonyms":[{"name":"AML with multilineage dysplasia","type":"exact"},{"name":"AML with myelodysplasia-related features","type":"exact"},{"name":"De novo acute myeloid leukaemia with multilineage dysplasia","type":"exact"},{"name":"De novo acute myeloid leukemia with multilineage dysplasia","type":"exact"},{"name":"acute myeloid leukaemia with myelodysplasia-related features","type":"related"},{"name":"acute myeloid leukemia with myelodysplasia-related features","type":"related"}],"termid":"MONDO:0019456","xrefs":{"Monarch":{"xref_id":"0019456"}}}


id: MONDO:0005231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infection caused by the hepatitis C virus.","definition_xrefs":["NCIT:C3098"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"viral hepatitis","termid":"MONDO:0006011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatitis C virus infection","secondary_identifiers":["SCTID:128302006","DOID:1883","MEDGEN:42425","ICD9:070.54","ICD9:070.7","MESH:D006526","ICD9:070.41","EFO:0003047","UMLS:C0019196"],"synonyms":[{"name":"Hepatitis C virus caused hepatitis","type":"exact"},{"name":"Hepatitis C virus hepatitis","type":"exact"},{"name":"NANBH","type":"exact"},{"name":"chronic hepatitis C","type":"narrow"},{"name":"hepatitis C infection","type":"exact"},{"name":"hepatitis Nona nonB","type":"exact"},{"name":"hepatitis type C","type":"exact"},{"name":"non-A, non-B Hepatitis","type":"exact"},{"name":"viral hepatitis C","type":"exact"}],"termid":"MONDO:0005231","xrefs":{"Monarch":{"xref_id":"0005231"}}}


id: GO:0042564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimer consisting of an alpha and a beta-subunit that imports proteins with an NLS into the nucleus through a nuclear pore.","definition_xrefs":["PMID:9323123","GOC:jl","Wikipedia:Importin","PMID:9323134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic transport complex","termid":"GO:0031074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NLS-dependent protein nuclear import complex","termid":"GO:0042564"}


id: PBO:0082469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calmodulin-binding actin-associated protein; roles in endocytic membrane tabulation and constriction, and exocytosis; N-BAR domain protein that interacts with Rvs161p to regulate actin cytoskeleton, endocytosis, and viability following starvation or osmotic stress; recruited to bud tips by Gyl1p and Gyp5p during polarized growth; homolog of mammalian amphiphysin; necessary for efficient trafficking of CoQ6 to mitochondria","termid":"PBO:0082469"}


id: GO:0003786
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77010],"is_not":false,"summary":null,"term":"GO:0003786"}]},"cv_name":"molecular_function","definition":"Binding to an actin filament along its length.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament binding","termid":"GO:0051015"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008092","GO:0003779","GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"actin lateral binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0003786","terms_by_termid":{"GO:0003786":null}}


id: PBO:0040731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 corepressor","termid":"PBO:0040731"}


id: GO:0047282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-L-dihydrostreptose + streptidine 6-phosphate = O-(1->4)-alpha-L-dihydrostreptosyl-streptidine 6-phosphate + dTDP + H+.","definition_xrefs":["EC:2.4.2.27","RHEA:24392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"dTDP-dihydrostreptose-streptidine-6-phosphate dihydrostreptosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.2.27-RXN","KEGG_REACTION:R04222"],"synonyms":[{"name":"dTDP-L-dihydrostreptose:streptidine-6-phosphate dihydrostreptosyltransferase activity","type":"related"},{"name":"dTDPdihydrostreptose-streptidine-6-phosphate dihydrostreptosyltransferase activity","type":"related"},{"name":"thymidine diphosphodihydrostreptose-streptidine 6-phosphate dihydrostreptosyltransferase activity","type":"related"}],"termid":"GO:0047282"}


id: MONDO:0003045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumors or cancer of the anal gland.","definition_xrefs":["MESH:D000694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anus neoplasm","termid":"MONDO:0003046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"anal gland neoplasm","secondary_identifiers":["MEDGEN:1897","UMLS:C0002757","DOID:4550"],"synonyms":[{"name":"gland of anal canal neoplasm","type":"exact"},{"name":"gland of anal canal neoplasm (disease)","type":"exact"},{"name":"gland of anal canal tumor","type":"exact"},{"name":"gland of anal canal tumour","type":"exact"},{"name":"neoplasm of gland of anal canal","type":"exact"},{"name":"tumor of gland of anal canal","type":"exact"},{"name":"tumour of gland of anal canal","type":"exact"}],"termid":"MONDO:0003045","xrefs":{"Monarch":{"xref_id":"0003045"}}}


id: GO:0031993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Absorbing energy from one or more photons and transferring their energy to another molecule, usually a protein, within the cell.","definition_xrefs":["GOC:mah","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy transducer activity","termid":"GO:0031992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"light transducer activity","termid":"GO:0031993"}


id: PBO:0071840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 35","termid":"PBO:0071840"}


id: GO:1901630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of presynaptic membrane organization.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of presynaptic membrane organization","termid":"GO:1901629"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"presynaptic membrane organization","termid":"GO:0097090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of presynaptic membrane organization","synonyms":[{"name":"down regulation of presynaptic membrane organisation","type":"exact"},{"name":"down regulation of presynaptic membrane organization","type":"exact"},{"name":"down-regulation of presynaptic membrane organisation","type":"exact"},{"name":"down-regulation of presynaptic membrane organization","type":"exact"},{"name":"downregulation of presynaptic membrane organisation","type":"exact"},{"name":"downregulation of presynaptic membrane organization","type":"exact"},{"name":"inhibition of presynaptic membrane organisation","type":"narrow"},{"name":"inhibition of presynaptic membrane organization","type":"narrow"},{"name":"negative regulation of pre-synaptic membrane organization","type":"exact"},{"name":"negative regulation of presynaptic membrane organisation","type":"exact"}],"termid":"GO:1901630"}


id: PBO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L24 (predicted)","termid":"PBO:0001973"}


id: GO:0102775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 H+ + isovaleryl-CoA + 3 malonyl-CoA = 6-(4-methyl-2-oxopentyl)-4-hydroxy-2-pyrone + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-(4-methyl-2-oxopentyl)-4-hydroxy-2-pyrone synthase activity (obsolete GO:0102775)","termid":"GO:0102775"}


id: MONDO:0001459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the radial nerve. Clinical features include weakness of elbow extension, elbow flexion, supination of the forearm, wrist and finger extension, and thumb abduction. Sensation may be impaired over regions of the dorsal forearm. Common sites of compression or traumatic injury include the axilla and radial groove of the humerus.","definition_xrefs":["MESH:D020425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"radial neuropathy","secondary_identifiers":["DOID:12171","UMLS:C0748226","MEDGEN:148185","SCTID:16644004"],"synonyms":[{"name":"peripheral neuropathy of radial nerve","type":"exact"},{"name":"radial nerve peripheral neuropathy","type":"exact"}],"termid":"MONDO:0001459","xrefs":{"Monarch":{"xref_id":"0001459"}}}


id: GO:1901507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acylglycerol transport.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"regulation of acylglycerol transport","termid":"GO:1901506"},{"relation_name":"negatively_regulates","term_name":"acylglycerol transport","termid":"GO:0034196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of acylglycerol transport","synonyms":[{"name":"down regulation of acylglycerol transport","type":"exact"},{"name":"down regulation of glyceride transport","type":"exact"},{"name":"down-regulation of acylglycerol transport","type":"exact"},{"name":"down-regulation of glyceride transport","type":"exact"},{"name":"downregulation of acylglycerol transport","type":"exact"},{"name":"downregulation of glyceride transport","type":"exact"},{"name":"inhibition of acylglycerol transport","type":"narrow"},{"name":"inhibition of glyceride transport","type":"narrow"},{"name":"negative regulation of glyceride transport","type":"exact"}],"termid":"GO:1901507"}


id: GO:0021621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the hypoglossal nerve. This process pertains to the physical shaping of a rudimentary structure. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:dgh","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"hypoglossal nerve morphogenesis","termid":"GO:0021618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoglossal nerve structural organization","synonyms":[{"name":"CN XII structural organization","type":"related"},{"name":"hypoglossal nerve structural organisation","type":"exact"}],"termid":"GO:0021621"}


id: PBO:0040197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 10","termid":"PBO:0040197"}


id: SO:1000125
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000125 sequence_variant_causing_gain_of_function_of_polypeptide (obsolete SO:1000125)","synonyms":[{"name":"gain of function of polypeptide","type":"exact"},{"name":"mutation causing gain of function of polypeptide","type":"related"},{"name":"sequence variant causing gain of function of polypeptide","type":"exact"}],"termid":"SO:1000125"}


id: PR:P36619
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmd1 gene.","definition_xrefs":["UniProtKB:P36619","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin B resistance protein pmd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.03","synonyms":[{"name":"Spom972h-pmd1","type":"exact"}],"termid":"PR:P36619"}


id: GO:0000323
data:
  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vacuole that is maintained at an acidic pH and which contains degradative enzymes, including a wide variety of acid hydrolases.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":172,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00029":null,"SJAG_00051":null,"SJAG_00115":null,"SJAG_00132":null,"SJAG_00181":null,"SJAG_00209":null,"SJAG_00212":null,"SJAG_00299":null,"SJAG_00402":null,"SJAG_00457":null,"SJAG_00516":null,"SJAG_00534":null,"SJAG_00570":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00620":null,"SJAG_00638":null,"SJAG_00688":null,"SJAG_00732":null,"SJAG_00771":null,"SJAG_00821":null,"SJAG_00824":null,"SJAG_00877":null,"SJAG_01027":null,"SJAG_01032":null,"SJAG_01033":null,"SJAG_01036":null,"SJAG_01072":null,"SJAG_01078":null,"SJAG_01080":null,"SJAG_01088":null,"SJAG_01095":null,"SJAG_01112":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01219":null,"SJAG_01236":null,"SJAG_01299":null,"SJAG_01319":null,"SJAG_01320":null,"SJAG_01324":null,"SJAG_01344":null,"SJAG_01400":null,"SJAG_01407":null,"SJAG_01471":null,"SJAG_01493":null,"SJAG_01505":null,"SJAG_01507":null,"SJAG_01509":null,"SJAG_01571":null,"SJAG_01612":null,"SJAG_01619":null,"SJAG_01783":null,"SJAG_01795":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01868":null,"SJAG_01913":null,"SJAG_01941":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_01990":null,"SJAG_01991":null,"SJAG_02023":null,"SJAG_02029":null,"SJAG_02060":null,"SJAG_02076":null,"SJAG_02100":null,"SJAG_02103":null,"SJAG_02114":null,"SJAG_02117":null,"SJAG_02132":null,"SJAG_02196":null,"SJAG_02231":null,"SJAG_02289":null,"SJAG_02330":null,"SJAG_02344":null,"SJAG_02356":null,"SJAG_02414":null,"SJAG_02432":null,"SJAG_02433":null,"SJAG_02440":null,"SJAG_02495":null,"SJAG_02565":null,"SJAG_02578":null,"SJAG_02581":null,"SJAG_02603":null,"SJAG_02656":null,"SJAG_02665":null,"SJAG_02694":null,"SJAG_02699":null,"SJAG_02716":null,"SJAG_02782":null,"SJAG_02853":null,"SJAG_02902":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_02962":null,"SJAG_03009":null,"SJAG_03022":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03100":null,"SJAG_03137":null,"SJAG_03138":null,"SJAG_03250":null,"SJAG_03256":null,"SJAG_03313":null,"SJAG_03316":null,"SJAG_03355":null,"SJAG_03363":null,"SJAG_03371":null,"SJAG_03400":null,"SJAG_03403":null,"SJAG_03405":null,"SJAG_03406":null,"SJAG_03442":null,"SJAG_03447":null,"SJAG_03450":null,"SJAG_03497":null,"SJAG_03508":null,"SJAG_03511":null,"SJAG_03586":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03652":null,"SJAG_03656":null,"SJAG_03667":null,"SJAG_03725":null,"SJAG_03848":null,"SJAG_03895":null,"SJAG_03899":null,"SJAG_03909":null,"SJAG_03928":null,"SJAG_03951":null,"SJAG_03960":null,"SJAG_03976":null,"SJAG_03987":null,"SJAG_04015":null,"SJAG_04023":null,"SJAG_04167":null,"SJAG_04232":null,"SJAG_04312":null,"SJAG_04426":null,"SJAG_04471":null,"SJAG_04502":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04637":null,"SJAG_04643":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04717":null,"SJAG_04725":null,"SJAG_04785":null,"SJAG_04790":null,"SJAG_04819":null,"SJAG_04867":null,"SJAG_04910":null,"SJAG_04955":null,"SJAG_04963":null,"SJAG_04966":null,"SJAG_04975":null,"SJAG_05184":null,"SJAG_05194":null,"SJAG_05210":null,"SJAG_05213":null,"SJAG_05245":null,"SJAG_05294":null,"SJAG_05342":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"lytic vacuole","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000323","terms_by_termid":{"GO:0000324":null,"GO:0000328":null,"GO:0000329":null}}


id: GO:0072500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a ligand-bound hormone receptor acts in the nucleus to stop, prevent, or reduce the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor (obsolete GO:0072500)","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor","type":"exact"}],"termid":"GO:0072500"}


id: PBO:0030436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_tRNA-Asp_C38_methylation","termid":"PBO:0030436"}


id: GO:2000387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of antral ovarian follicle growth.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"antral ovarian follicle growth","termid":"GO:0001547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antral ovarian follicle growth","termid":"GO:2000387"}


id: PBO:0087968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transportin or cytosolic karyopherin beta 2; functions in the rg-nuclear localization signal-mediated nuclear import/reimport of mRNA-binding proteins Nab2p and Hrp1p; regulates asymmetric protein synthesis in daughter cells during mitosis","termid":"PBO:0087968"}


id: GO:0160162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the cell surface receptor CD27 to its physiological ligand CD70, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:26359318","PMID:8387892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"CD27 signaling pathway","termid":"GO:0160162"}


id: FYECO:0000433
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing mannitol as the carbon source, yeast extract and other components. The concentration of mannitol is typically around 2%.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannitol YE","synonyms":[{"name":"mannitol rich medium","type":"broad"}],"termid":"FYECO:0000433"}


id: GO:0033259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which new strands of DNA are synthesized in a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"},{"relation_name":"is_a","term_name":"plastid DNA metabolic process","termid":"GO:0033258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"plastid DNA replication","synonyms":[{"name":"plastid DNA synthesis","type":"related"},{"name":"replication of plastid DNA","type":"exact"}],"termid":"GO:0033259"}


id: GO:0046355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannan, the main hemicellulose of soft (coniferous) wood, made up of D-mannose, D-glucose and D-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"},{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"mannan catabolic process","synonyms":[{"name":"mannan breakdown","type":"exact"},{"name":"mannan catabolism","type":"exact"},{"name":"mannan degradation","type":"exact"}],"termid":"GO:0046355"}


id: PBO:0051417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-11","termid":"PBO:0051417"}


id: PBO:0044969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHRSX intronic transcript 1","termid":"PBO:0044969"}


id: GO:0090576
data:
  {"annotated_genes":["SJAG_05339","SJAG_03120","SJAG_03007","SJAG_02815","SJAG_00421","SJAG_03354","SJAG_01827","SJAG_00585","SJAG_03546"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77391,95367,71570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000126"},{"annotations":[73588,71623,70868,87975,69578,76292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000127"}]},"cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase III.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_00585":null,"SJAG_01827":null,"SJAG_02815":null,"SJAG_03007":null,"SJAG_03120":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase III transcription regulator complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase III transcription factor complex","type":"narrow"}],"termid":"GO:0090576","terms_by_termid":{"GO:0000126":null,"GO:0000127":null}}


id: MONDO:0020267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic keratinization disorder associated with ocular features (obsolete MONDO:0020267)","secondary_identifiers":["Orphanet:98697"],"termid":"MONDO:0020267","xrefs":{"Monarch":{"xref_id":"0020267"}}}


id: PBO:0059134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 1","termid":"PBO:0059134"}


id: GO:0120103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which assembles on the mother centriole during cilium formation, adjacent and proximal to a centriolar distal appendage. In human, it contains ODF2, CNTRL, NIN, CCDC120c and CCDC68.","definition_xrefs":["GOC:cilia","PMID:28422092","PMID:27818179","PMID:23213374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"centriolar subdistal appendage","synonyms":[{"name":"subdistal appendage of basal body","type":"exact"},{"name":"subdistal appendage of centriole","type":"exact"},{"name":"subdistal appendage of mother centriole","type":"exact"}],"termid":"GO:0120103"}


id: GO:1900048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hemostasis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of hemostasis","termid":"GO:1900046"},{"relation_name":"positively_regulates","term_name":"hemostasis","termid":"GO:0007599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemostasis","synonyms":[{"name":"activation of hemostasis","type":"narrow"},{"name":"up regulation of hemostasis","type":"exact"},{"name":"up-regulation of hemostasis","type":"exact"},{"name":"upregulation of hemostasis","type":"exact"}],"termid":"GO:1900048"}


id: GO:0019592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannitol, the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol catabolic process","termid":"GO:0019407"},{"relation_name":"is_a","term_name":"mannitol metabolic process","termid":"GO:0019594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"mannitol catabolic process","synonyms":[{"name":"mannitol breakdown","type":"exact"},{"name":"mannitol catabolism","type":"exact"},{"name":"mannitol degradation","type":"exact"}],"termid":"GO:0019592"}


id: PBO:0090466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Ste11","termid":"PBO:0090466"}


id: PBO:0077308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 45A","termid":"PBO:0077308"}


id: PBO:0067870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 172","termid":"PBO:0067870"}


id: GO:1903024
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90521],"is_not":false,"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of an ascospore-type prospore membrane.","definition_xrefs":["PMID:11405625","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of ascospore formation","termid":"GO:0075296"},{"relation_name":"is_a","term_name":"regulation of ascospore-type prospore membrane formation","termid":"GO:1903023"},{"relation_name":"positively_regulates","term_name":"ascospore-type prospore membrane formation","termid":"GO:0032120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0030437"}],"interesting_parent_ids":["GO:0008150","GO:0030437","GO:0007049","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"positive regulation of ascospore-type prospore membrane formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of FSM assembly","type":"narrow"},{"name":"activation of FSM biosynthesis","type":"narrow"},{"name":"activation of FSM formation","type":"narrow"},{"name":"activation of ascospore-type prospore membrane assembly","type":"narrow"},{"name":"activation of forespore membrane biosynthesis","type":"narrow"},{"name":"activation of forespore membrane formation","type":"narrow"},{"name":"positive regulation of FSM assembly","type":"exact"},{"name":"positive regulation of FSM biosynthesis","type":"exact"},{"name":"positive regulation of FSM formation","type":"exact"},{"name":"positive regulation of ascospore-type prospore membrane assembly","type":"related"},{"name":"positive regulation of forespore membrane biosynthesis","type":"exact"},{"name":"positive regulation of forespore membrane formation","type":"exact"},{"name":"up regulation of FSM assembly","type":"exact"},{"name":"up regulation of FSM biosynthesis","type":"exact"},{"name":"up regulation of FSM formation","type":"exact"},{"name":"up regulation of ascospore-type prospore membrane assembly","type":"exact"},{"name":"up regulation of forespore membrane biosynthesis","type":"exact"},{"name":"up regulation of forespore membrane formation","type":"exact"},{"name":"up-regulation of FSM assembly","type":"exact"},{"name":"up-regulation of FSM biosynthesis","type":"exact"},{"name":"up-regulation of FSM formation","type":"exact"},{"name":"up-regulation of ascospore-type prospore membrane assembly","type":"exact"},{"name":"up-regulation of forespore membrane biosynthesis","type":"exact"},{"name":"up-regulation of forespore membrane formation","type":"exact"},{"name":"upregulation of FSM assembly","type":"exact"},{"name":"upregulation of FSM biosynthesis","type":"exact"},{"name":"upregulation of FSM formation","type":"exact"},{"name":"upregulation of ascospore-type prospore membrane assembly","type":"exact"},{"name":"upregulation of forespore membrane biosynthesis","type":"exact"},{"name":"upregulation of forespore membrane formation","type":"exact"}],"termid":"GO:1903024","terms_by_termid":{"GO:1903024":null}}


id: FYPO:0005492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of protein localization in vacuole does not occur, and some of the protein is secreted, i.e. a protein that normally resides in the vacuole is instead secreted.","definition_xrefs":["PomBase:mah","PMID:22484924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished maintenance of protein localization in vacuole, with protein secreted","synonyms":[{"name":"abolished maintenance of protein localisation in vacuole, with protein secreted","type":"exact"},{"name":"abolished maintenance of protein localization in vacuole, with protein secreted, during mitotic cell cycle","type":"related"},{"name":"abolished maintenance of protein localization in vacuole, with protein secreted, during vegetative growth","type":"exact"},{"name":"maintenance of protein localization in vacuole abolished, with protein secreted","type":"exact"},{"name":"protein mislocalized from vacuole to extracellular region","type":"related"}],"termid":"FYPO:0005492"}


id: GO:0047155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-hydroxymethylceph-3-em-4-carboxylate + carbamoyl-phosphate = phosphate + a 3-carbamoyloxymethylcephem.","definition_xrefs":["EC:2.1.3.7","MetaCyc:2.1.3.7-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"3-hydroxymethylcephem carbamoyltransferase activity","secondary_identifiers":["GO:0045447"],"synonyms":[{"name":"3'-hydroxymethylcephem-O-carbamoyltransferase activity","type":"exact"},{"name":"carbamoyl-phosphate:3-hydroxymethylceph-3-em-4-carboxylate carbamoyltransferase activity","type":"related"}],"termid":"GO:0047155"}


id: PBO:0076216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 and UNC84 domain containing 3","termid":"PBO:0076216"}


id: PBO:0049899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERPUD2 antisense RNA 1","termid":"PBO:0049899"}


id: MONDO:0012855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the ARL13B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 8","secondary_identifiers":["MESH:C567358","OMIM:612291","MEDGEN:436772","UMLS:C2676771","GARD:15550","DOID:0111003"],"synonyms":[{"name":"ARL13B Joubert syndrome","type":"exact"},{"name":"JBTS8","type":"exact"},{"name":"Joubert syndrome 8","type":"exact"},{"name":"Joubert syndrome caused by mutation in ARL13B","type":"exact"},{"name":"Joubert syndrome type 8","type":"exact"}],"termid":"MONDO:0012855","xrefs":{"Monarch":{"xref_id":"0012855"}}}


id: PBO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Rad8","termid":"PBO:0000172"}


id: PBO:0073114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 2","termid":"PBO:0073114"}


id: PBO:0081438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 287","termid":"PBO:0081438"}


id: MONDO:0033044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome 13","secondary_identifiers":["DOID:0080253","OMIM:617562","GARD:16236","UMLS:C4539714","MEDGEN:1627793"],"synonyms":[{"name":"MKS13","type":"related"},{"name":"Meckel syndrome 13","type":"exact"},{"name":"Meckel syndrome, type 13","type":"exact"}],"termid":"MONDO:0033044","xrefs":{"Monarch":{"xref_id":"0033044"}}}


id: PBO:0088469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex bromodomain subunit Rsc4","termid":"PBO:0088469"}


id: PBO:0013444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 family ATP-dependent DNA helicase Fft3","termid":"PBO:0013444"}


id: PBO:0068175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 482","termid":"PBO:0068175"}


id: MONDO:0000966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign circumscribed tumor characterized by small spindle cells, rounded hyperchromatic cells and multinucleated giant cells with radially arranged nuclei.","definition_xrefs":["NCIT:C3703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleomorphic lipoma","secondary_identifiers":["ICDO:8854/0","MEDGEN:60027","SCTID:404059000","UMLS:C0205823","DOID:10192"],"synonyms":[{"name":"pleomorphic lipoma","type":"exact"},{"name":"pleomorphic lipoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0000966","xrefs":{"Monarch":{"xref_id":"0000966"}}}


id: MONDO:0016224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant form of proximal spinal muscular atrophy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant proximal spinal muscular atrophy (obsolete MONDO:0016224)","secondary_identifiers":["Orphanet:211037"],"synonyms":[{"name":"proximal spinal muscular atrophy, autosomal dominant","type":"exact"}],"termid":"MONDO:0016224","xrefs":{"Monarch":{"xref_id":"0016224"}}}


id: SO:0001620
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant located with the sequence of the mature miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_coding_transcript_variant","termid":"SO:0001619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature_miRNA_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"VEP:mature_miRNA_variant","type":"exact"},{"name":"mature miRNA variant","type":"exact"},{"name":"snpEff:MICRO_RNA","type":"exact"},{"name":"within_mature_miRNA","type":"exact"}],"termid":"SO:0001620"}


id: GO:0071381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin F stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin F","termid":"GO:0034696"},{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin F stimulus","termid":"GO:0071381"}


id: GO:0071198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP6 associated with the channel via interaction with the Kv alpha subunit 4.1.","definition_xrefs":["PMID:15911355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"Kv4.1-DPP6 channel complex","secondary_identifiers":["CORUM:600"],"synonyms":[{"name":"Kv4.1-DPPX channel complex","type":"exact"}],"termid":"GO:0071198"}


id: PBO:0090187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate Mis19 ortholog, syntenic position","termid":"PBO:0090187"}


id: PBO:0117011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNA6 antisense RNA 1","termid":"PBO:0117011"}


id: MONDO:0032826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 21","secondary_identifiers":["DOID:0112267","MEDGEN:1684676","OMIM:618594","UMLS:C5231498"],"synonyms":[{"name":"NEPHROTIC SYNDROME, TYPE 21","type":"related"},{"name":"NPHS21","type":"related"}],"termid":"MONDO:0032826","xrefs":{"Monarch":{"xref_id":"0032826"}}}


id: GO:1903336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vacuolar transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"negatively_regulates","term_name":"vacuolar transport","termid":"GO:0007034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of vacuolar transport","synonyms":[{"name":"down regulation of vacuolar transport","type":"exact"},{"name":"down-regulation of vacuolar transport","type":"exact"},{"name":"downregulation of vacuolar transport","type":"exact"},{"name":"inhibition of vacuolar transport","type":"narrow"}],"termid":"GO:1903336"}


id: FYPO:0006885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured at or associated with the mitotic spindle is lower than normal.","definition_xrefs":["PomBase:mah","PMID:30463883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000120","FYPO:0002399","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level at mitotic spindle","synonyms":[{"name":"decreased protein level at mitotic spindle during mitotic cell cycle","type":"related"},{"name":"decreased protein level at mitotic spindle during vegetative growth","type":"exact"},{"name":"decreased protein level in mitotic spindle","type":"exact"},{"name":"reduced protein level at mitotic spindle","type":"exact"}],"termid":"FYPO:0006885"}


id: MONDO:0017897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive (AR) mendelian susceptibility to mycobacterial diseases (MSMD) due to a complete deficiency describes a group of genetic variants of MSMD comprised of MSMD due to complete interferon gamma receptor 1 (IFN-gammaR1) deficiency, complete IFN-gammaR2 deficiency, complete interleukin-12 subunit beta (IL12B) deficiency, complete interleukin-12 receptor subunit beta-1 (IL-12RB1) deficiency and complete ISG15 deficiency.","definition_xrefs":["Orphanet:319535"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency (obsolete MONDO:0017897)","synonyms":[{"name":"autosomal recessive MSMD due to a complete deficiency","type":"exact"},{"name":"mendelian susceptibility to mycobacterial diseases due to a complete deficiency, autosomal recessive","type":"exact"}],"termid":"MONDO:0017897","xrefs":{"Monarch":{"xref_id":"0017897"}}}


id: MOD:01108
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 2-amino-5-(4-methoxyphenyl)-5-oxopentanoic acid, glutamtic acid anisole adduct.","definition_xrefs":["DeltaMass:259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"anisyl modified residue","termid":"MOD:01007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-amino-5-(4-methoxyphenyl)-5-oxopentanoic acid (Glu)","synonyms":[{"name":"anisole adducted glutamyl","type":"exact"}],"termid":"MOD:01108"}


id: PBO:0011494
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin b5-like gene","termid":"PBO:0011494"}


id: PBO:0091825
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae KIN28","termid":"PBO:0091825"}


id: PBO:0070178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 93 pseudogene","termid":"PBO:0070178"}


id: GO:0060769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of epithelial cell proliferation that contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation involved in prostate gland development","termid":"GO:0060768"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell proliferation involved in prostate gland development","termid":"GO:0060769"}


id: GO:0071579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of zinc ions (Zn2+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"zinc ion transport","termid":"GO:0006829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of zinc ion transport","termid":"GO:0071579"}


id: PBO:0044996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIAPH2 antisense RNA 1","termid":"PBO:0044996"}


id: GO:0042950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of salicin (saligenin-beta-D-glucopyranoside), a glucoside of o-hydroxybenzylalcohol, from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:jl","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucoside transmembrane transporter activity","termid":"GO:0015573"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"salicin transmembrane transporter activity","termid":"GO:0042950"}


id: PBO:0064148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 1","termid":"PBO:0064148"}


id: PBO:0077588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymopoietin pseudogene 1","termid":"PBO:0077588"}


id: GO:0052636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an arabinosyl group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"arabinosyltransferase activity","synonyms":[{"name":"arabinosyl transferase activity","type":"exact"}],"termid":"GO:0052636"}


id: MONDO:0018520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare epithelial tumor of pancreas (obsolete MONDO:0018520)","secondary_identifiers":["Orphanet:424033"],"synonyms":[{"name":"rare pancreatic epithelial tumor","type":"exact"}],"termid":"MONDO:0018520","xrefs":{"Monarch":{"xref_id":"0018520"}}}


id: PR:O74815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.04","synonyms":[{"name":"Spom972h-ppk27","type":"exact"}],"termid":"PR:O74815"}


id: PBO:0079875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A pseudogene 2","termid":"PBO:0079875"}


id: GO:1904635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glomerular visceral epithelial cell apoptotic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23692924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of podocyte apoptotic process","termid":"GO:1904633"},{"relation_name":"positively_regulates","term_name":"podocyte apoptotic process","termid":"GO:1903210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of podocyte apoptotic process","synonyms":[{"name":"activation of glomerular podocyte apoptosis","type":"narrow"},{"name":"activation of glomerular podocyte apoptotic process","type":"narrow"},{"name":"activation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"activation of glomerular visceral epithelial cell apoptotic process","type":"narrow"},{"name":"activation of podocyte apoptosis","type":"narrow"},{"name":"activation of podocyte apoptotic process","type":"narrow"},{"name":"positive regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"positive regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"positive regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"positive regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"positive regulation of podocyte apoptosis","type":"narrow"},{"name":"up regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"up regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"up regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"up regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"up regulation of podocyte apoptosis","type":"narrow"},{"name":"up regulation of podocyte apoptotic process","type":"exact"},{"name":"up-regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"up-regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"up-regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"up-regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"up-regulation of podocyte apoptosis","type":"narrow"},{"name":"up-regulation of podocyte apoptotic process","type":"exact"},{"name":"upregulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"upregulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"upregulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"upregulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"upregulation of podocyte apoptosis","type":"narrow"},{"name":"upregulation of podocyte apoptotic process","type":"exact"}],"termid":"GO:1904635"}


id: PBO:0063708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 2 like 1","termid":"PBO:0063708"}


id: PBO:0084466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase-responsive inhibitor of the Ste12p transcription factor; involved in the regulation of mating-specific genes and the invasive growth pathway; related regulators Dig1p and Dig2p bind to Ste12p; DIG2 has a paralog, DIG1, that arose from the whole genome duplication","termid":"PBO:0084466"}


id: PBO:0044853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 134","termid":"PBO:0044853"}


id: MONDO:0013765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any coronary artery disease in which the cause of the disease is a mutation in the MMP3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronary heart disease, susceptibility to, 6","secondary_identifiers":["UMLS:C3280913","MEDGEN:482543","OMIM:614466"],"synonyms":[{"name":"CHDS6","type":"related"},{"name":"MMP3 coronary artery disease","type":"exact"},{"name":"coronary artery disease caused by mutation in MMP3","type":"exact"},{"name":"coronary heart disease, susceptibility to, 6","type":"exact"},{"name":"coronary heart disease, susceptibility to, type 6","type":"exact"},{"name":"susceptibility to coronary heart disease 6","type":"related"}],"termid":"MONDO:0013765","xrefs":{"Monarch":{"xref_id":"0013765"}}}


id: MOD:00235
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-nitrosyl-L-cysteine.","definition_xrefs":["PubMed:8637569","PubMed:8626764","RESID:AA0230","PubMed:10442087","Unimod:275","PubMed:11562475","PubMed:15688001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-nitrosyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-nitrososulfanyl-propanoic acid","type":"exact"},{"name":"L-cysteine nitrite ester","type":"exact"},{"name":"MOD_RES S-nitrosocysteine","type":"exact"},{"name":"Nitrosyl","type":"related"},{"name":"S-nitrosocysteine","type":"exact"},{"name":"S-nitrosyl-L-cysteine","type":"exact"},{"name":"S-nitrosylation","type":"related"},{"name":"SNOCys","type":"exact"}],"termid":"MOD:00235"}


id: GO:0045248
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cytosolic complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) (E1), dihydrolipoamide S-succinyltransferase (E2) and dihydrolipoamide dehydrogenase (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2).","definition_xrefs":["GOC:mtg_sensu","PMID:10848975"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic oxoglutarate dehydrogenase complex (obsolete GO:0045248)","termid":"GO:0045248"}


id: PBO:0090418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex kleisin subunit Rec8","termid":"PBO:0090418"}


id: FYPO:0007510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested at the mitotic G2/M phase transition in the absence of the mitotic DNA replication checkpoint. The previous S phase is completed, no replication intermediates can be observed, and cells do not undergo rereplication.","definition_xrefs":["PMID:17690116","PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition in absence of mitotic DNA replication checkpoint","synonyms":[{"name":"cell cycle arrest at G2/M phase transition in absence of mitotic DNA replication checkpoint during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest at mitotic G2/M phase transition in absence of mitotic DNA replication checkpoint during vegetative growth","type":"exact"},{"name":"mitotic cell cycle arrest at the G2/M transition with completed S phase","type":"related"}],"termid":"FYPO:0007510"}


id: MONDO:0011741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to, 6","secondary_identifiers":["MEDGEN:369600","OMIM:606874","UMLS:C1969837"],"synonyms":[{"name":"HSCR6","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0011741","xrefs":{"Monarch":{"xref_id":"0011741"}}}


id: PBO:0062140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 7 pseudogene","termid":"PBO:0062140"}


id: GO:0046210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitric oxide catabolic process","synonyms":[{"name":"nitric oxide breakdown","type":"exact"},{"name":"nitric oxide catabolism","type":"exact"},{"name":"nitric oxide degradation","type":"exact"}],"termid":"GO:0046210"}


id: GO:0060062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region at the dorsal lip of the blatopore of the embryo that acts as the main signaling center establishing the vertebrate body plan.","definition_xrefs":["GOC:dph","PMID:9442883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Spemann organizer formation","termid":"GO:0060061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation at the dorsal lip of the blastopore","synonyms":[{"name":"Spemann's organizer formation at the dorsal lip of the blastopore","type":"exact"},{"name":"Spemann-Mangold organizer formation at the dorsal lip of the blastopore","type":"exact"}],"termid":"GO:0060062"}


id: PBO:0050764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 26","termid":"PBO:0050764"}


id: PR:Q9UT10
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ski7 gene.","definition_xrefs":["UniProtKB:Q9UT10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GTP-binding protein P8A3.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.05","synonyms":[{"name":"Spom972h-ski7","type":"exact"}],"termid":"PR:Q9UT10"}


id: PBO:0040198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 11","termid":"PBO:0040198"}


id: GO:0001835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hatching of the cellular blastocyst from the zona pellucida.","definition_xrefs":["GOC:dph","ISBN:0198542771","ISBN:0124020607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hatching","termid":"GO:0035188"},{"relation_name":"part_of","term_name":"blastocyst development","termid":"GO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastocyst hatching","synonyms":[{"name":"blastula hatching","type":"related"}],"termid":"GO:0001835"}


id: GO:0034203
data:
  {"annotated_genes":["SJAG_02897","SJAG_03774"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76738,94217],"is_not":false,"summary":null,"term":"GO:0034203"}]},"cv_name":"biological_process","definition":"The translocation, or flipping, of glycolipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["GOC:go_curators","PMID:11807558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid translocation","termid":"GO:0034204"},{"relation_name":"is_a","term_name":"glycolipid transport","termid":"GO:0046836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02897":null,"SJAG_03774":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"glycolipid translocation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034203","terms_by_termid":{"GO:0034203":null}}


id: PBO:0028641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_meiosis","termid":"PBO:0028641"}


id: MONDO:0004953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common type of invasive breast carcinoma, accounting for approximately 70% of breast carcinomas. The gross appearance is usually typical with an irregular stellate outline. Microscopically, randomly arranged epithelial elements are seen. When large sheets of malignant cells are present, necrosis may be seen. With adequate tissue sampling, in situ carcinoma can be demonstrated in association with the infiltrating carcinoma. The in situ component is nearly always ductal but occasionally may be lobular or both.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast ductal adenocarcinoma","termid":"MONDO:0005590"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"invasive ductal breast carcinoma","secondary_identifiers":["NCIT:C4194","ICDO:8521/3","SCTID:408643008","ICDO:8500/3","ONCOTREE:IDC","MEDGEN:730612","UMLS:C1412014","DOID:3008","EFO:0000186","ICD9:174.8"],"synonyms":[{"name":"breast invasive ductal carcinoma","type":"related"},{"name":"ductal adenocarcinoma","type":"exact"},{"name":"infiltrating ductal adenocarcinoma","type":"exact"},{"name":"infiltrating ductal breast carcinoma","type":"exact"},{"name":"infiltrating ductal carcinoma","type":"exact"},{"name":"infiltrating ductal carcinoma of breast","type":"exact"},{"name":"infiltrating ductal carcinoma of the breast","type":"exact"},{"name":"invasive ductal adenocarcinoma","type":"exact"},{"name":"invasive ductal breast carcinoma","type":"exact"},{"name":"invasive ductal carcinoma","type":"exact"},{"name":"invasive ductal carcinoma of breast","type":"exact"},{"name":"invasive ductal carcinoma of the breast","type":"exact"},{"name":"invasive ductal carcinoma, NST","type":"exact"},{"name":"invasive ductal carcinoma, No specific type","type":"exact"}],"termid":"MONDO:0004953","xrefs":{"Monarch":{"xref_id":"0004953"}}}


id: PBO:0009980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm4/Cdc21","termid":"PBO:0009980"}


id: PBO:0072033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 3","termid":"PBO:0072033"}


id: PBO:0066169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 2","termid":"PBO:0066169"}


id: MONDO:0020031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare disease of cellular proliferation.","gene_count":0,"genotype_count":0,"name":"obsolete rare tumor (obsolete MONDO:0020031)","secondary_identifiers":["Orphanet:98057"],"synonyms":[{"name":"rare disease of cellular proliferation","type":"exact"},{"name":"rare neoplasm","type":"exact"},{"name":"rare neoplasm (disease)","type":"exact"}],"termid":"MONDO:0020031","xrefs":{"Monarch":{"xref_id":"0020031"}}}


id: PBO:0067234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 305, pseudogene","termid":"PBO:0067234"}


id: GO:0033189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin A stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin A","synonyms":[{"name":"response to retinol","type":"narrow"}],"termid":"GO:0033189"}


id: PBO:0028570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleotide-excision_repair_during_cellular_response_to_UV","termid":"PBO:0028570"}


id: PBO:0001544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein Rsa3 (predicted)","termid":"PBO:0001544"}


id: FYPO:0004733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains fewer cytoplasmic microtubules nucleated from the equatorial microtubule organizing center than normal.","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"cytoplasmic microtubules nucleated from eMTOC present in decreased numbers","synonyms":[{"name":"cytoplasmic microtubules nucleated from eMTOC present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubules nucleated from eMTOC present in decreased numbers during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules nucleated from eMTOC present in reduced numbers","type":"exact"},{"name":"cytoplasmic microtubules nucleated from equatorial microtubule organizing center present in decreased numbers","type":"exact"},{"name":"decreased number of cytoplasmic microtubules nucleated from eMTOC","type":"exact"},{"name":"reduced number of cytoplasmic microtubules nucleated from eMTOC","type":"exact"}],"termid":"FYPO:0004733"}


id: GO:0033119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of RNA splicing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of RNA splicing","termid":"GO:0043484"},{"relation_name":"negatively_regulates","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA splicing","termid":"GO:0033119"}


id: GO:2000881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of starch catabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"regulates","term_name":"starch catabolic process","termid":"GO:0005983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of starch catabolic process","synonyms":[{"name":"regulation of starch breakdown","type":"exact"},{"name":"regulation of starch catabolism","type":"exact"},{"name":"regulation of starch degradation","type":"exact"}],"termid":"GO:2000881"}


id: PR:Q10438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pby1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin--tyrosine ligase C12B10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.04","synonyms":[{"name":"Spom972h-pby1","type":"exact"}],"termid":"PR:Q10438"}


id: MONDO:0044245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nailbeds, pigmentation of (obsolete MONDO:0044245)","secondary_identifiers":["OMIM:161100"],"synonyms":[{"name":"NAILBEDS, pigmentation OF","type":"related"}],"termid":"MONDO:0044245","xrefs":{"Monarch":{"xref_id":"0044245"}}}


id: PBO:0040261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 14","termid":"PBO:0040261"}


id: MONDO:0008820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arthrogryposis, distal, with hypopituitarism, intellectual disability, and facial anomalies (obsolete MONDO:0008820)","termid":"MONDO:0008820","xrefs":{"Monarch":{"xref_id":"0008820"}}}


id: GO:0050159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: o-orsellinate + H+ = CO2 + orcinol.","definition_xrefs":["RHEA:16733","EC:4.1.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"orsellinate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R02831","MetaCyc:ORSELLINATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"orsellinate carboxy-lyase (orcinol-forming)","type":"related"},{"name":"orsellinate carboxy-lyase activity","type":"related"}],"termid":"GO:0050159"}


id: PBO:0040025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 1","termid":"PBO:0040025"}


id: MONDO:0007640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare progressive autosomal dominant macular dystrophy, presenting between the third and sixth decades of life, characterized by retinal atrophy and retinal detachment and leading to loss of central vision, then peripheral vision, and eventually blindness.","definition_xrefs":["Orphanet:59181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Sorsby fundus dystrophy","secondary_identifiers":["MESH:C564992","MEDGEN:338164","OMIM:136900","GARD:16480","DOID:0090114","UMLS:C1850938","SCTID:193410003","icd11.foundation:796458172"],"synonyms":[{"name":"SFD","type":"exact"},{"name":"Sorsby fundus dystrophy","type":"exact"},{"name":"Sorsby pseudoinflammatory fundus dystrophy","type":"related"},{"name":"Sorsby's fundus dystrophy","type":"exact"},{"name":"Sorsby's pseudoinflammatory macular dystrophy","type":"related"},{"name":"fundus dystrophy, pseudoinflammatory, of Sorsby","type":"related"},{"name":"hemorrhagic macular dystrophy","type":"exact"},{"name":"macular dystrophy, hemorrhagic","type":"related"},{"name":"pseudoinflammatory fundus dystrophy of Sorsby","type":"exact"}],"termid":"MONDO:0007640","xrefs":{"Monarch":{"xref_id":"0007640"}}}


id: PBO:0043412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cap methyltransferase 1","termid":"PBO:0043412"}


id: PBO:0016549
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by frog X-MAPK","termid":"PBO:0016549"}


id: PBO:0031605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_S_phase_progression","termid":"PBO:0031605"}


id: PBO:0025522
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by X. laevis MO15","termid":"PBO:0025522"}


id: PBO:0080062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 31","termid":"PBO:0080062"}


id: MONDO:0015444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cleidocranial dysplasia (obsolete MONDO:0015444)","termid":"MONDO:0015444","xrefs":{"Monarch":{"xref_id":"0015444"}}}


id: GO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates an innate immune response. Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. Examples of this process include activation of the hypersensitive response of Arabidopsis thaliana and activation of any NOD or TLR signaling pathway in vertebrate species.","definition_xrefs":["PMID:15199967","PMID:16177805","ISBN:0781735149","GO_REF:0000022","GOC:add","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of immune response","termid":"GO:0002253"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of innate immune response","secondary_identifiers":["GO:0002219"],"termid":"GO:0002218"}


id: FYPO:0003529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that enters the cell cycle and undergoes two or more rounds of cell division, but then becomes elongated and undergoes cell cycle arrest in interphase of the mitotic cell cycle, and eventually dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, cell cycle arrest in mitotic interphase, elongated cells","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated aseptate cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated cell arrested at interphase","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, cell cycle arrest in mitotic interphase, elongated cells","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, cell cycle arrest in mitotic interphase, elongated cells","type":"exact"}],"termid":"FYPO:0003529"}


id: PBO:0040843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLM RecQ like helicase","termid":"PBO:0040843"}


id: PBO:0075793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 11 pseudogene 1","termid":"PBO:0075793"}


id: MONDO:1011935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth and respiratory lethal syndrome, non-human animal","secondary_identifiers":["OMIA:002560"],"termid":"MONDO:1011935","xrefs":{"Monarch":{"xref_id":"1011935"}}}


id: GO:0141102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxymethylaminomethyluridine34 in tRNA(Leu) + S-adenosyl-L-methionine = 5-carboxymethylaminomethyl-2'-O-methyluridine34 in tRNA(Leu) + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:20855540","RHEA:43088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0016740","GO:0140098","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"tRNA (5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase activity","synonyms":[{"name":"tRNA (cytidine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase activity","type":"exact"}],"termid":"GO:0141102"}


id: SO:0001906
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the reduction of a genomic feature, with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_truncation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:feature_truncation","type":"exact"},{"name":"VEP:feature_truncation","type":"exact"},{"name":"feature truncation","type":"exact"}],"termid":"SO:0001906"}


id: MONDO:0007228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachymesomelia-renal syndrome","secondary_identifiers":["MESH:C537096","UMLS:C1862084","MEDGEN:350586","OMIM:113470"],"synonyms":[{"name":"brachymesomelia renal syndrome","type":"related"},{"name":"brachymesomelia-renal syndrome","type":"exact"},{"name":"severe upper limb brachymesomelia, glomerulocystic renal dysplasia, cranial and facial abnormalities, corneal opacities","type":"related"}],"termid":"MONDO:0007228","xrefs":{"Monarch":{"xref_id":"0007228"}}}


id: PBO:0048852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNRHR2 pseudogene 1","termid":"PBO:0048852"}


id: GO:1902007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of toxin transport.","definition_xrefs":["GOC:TermGenie","PMID:22792315","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of toxin transport (obsolete GO:1902007)","termid":"GO:1902007"}


id: PBO:0061134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME1-NME2 readthrough","termid":"PBO:0061134"}


id: PATO:0001056
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001056 number (obsolete PATO:0001056)","termid":"PATO:0001056"}


id: PBO:0076406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 4","termid":"PBO:0076406"}


id: FYPO:0002123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 4,6-pyruvylated D-galactose (4,6-O-[(1R)-1-carboxyethylidene]-D-galactose) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"pyruvylated galactose absent from cell","synonyms":[{"name":"4,6-O-[(1R)-1-carboxyethylidene]-D-galactose absent from cell","type":"exact"},{"name":"4,6-pyruvylated D-galactose absent from cell","type":"exact"},{"name":"PvGal absent from cell","type":"exact"},{"name":"pyruvylated galactose absent from cell during mitotic cell cycle","type":"related"},{"name":"pyruvylated galactose absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002123"}


id: MONDO:0000851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete achondrogenesis (obsolete MONDO:0000851)","termid":"MONDO:0000851","xrefs":{"Monarch":{"xref_id":"0000851"}}}


id: MONDO:0012822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 6","secondary_identifiers":["OMIM:612231","MEDGEN:436865","UMLS:C2677121"],"synonyms":[{"name":"CRCS6","type":"exact"},{"name":"colorectal cancer, susceptibility to, 6","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 8Q23","type":"related"}],"termid":"MONDO:0012822","xrefs":{"Monarch":{"xref_id":"0012822"}}}


id: GO:0018004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formylation of the N-terminal amino acid of proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein formylation","termid":"GO:0018256"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein formylation","termid":"GO:0018004"}


id: GO:0044779
data:
  {"annotated_genes":["SJAG_01330","SJAG_01837","SJAG_01082","SJAG_04126","SJAG_03327","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114288,106116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[75086,116460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[113575],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[101137],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell cycle checkpoint that delays the metaphase/anaphase transition of a meiotic nuclear division until the spindle is correctly assembled and that the chromosomes are attached to the spindle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle checkpoint signaling","termid":"GO:0031577"},{"relation_name":"is_a","term_name":"meiotic cell cycle checkpoint signaling","termid":"GO:0033313"},{"relation_name":"is_a","term_name":"negative regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902103"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"meiotic spindle checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902398"],"synonyms":[{"name":"intracellular signal transduction involved in meiotic spindle checkpoint","type":"exact"},{"name":"intracellular signal transduction pathway involved in meiotic spindle checkpoint","type":"exact"},{"name":"intracellular signaling cascade involved in meiotic spindle checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in meiotic spindle checkpoint","type":"exact"},{"name":"meiotic spindle checkpoint","type":"exact"}],"termid":"GO:0044779","terms_by_termid":{"GO:0033316":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: FYPO:0007683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which components of the actin fusion focus are more widely distributed along the shmoo tip than normal.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton","termid":"FYPO:0005665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"name":"wide actin fusion focus","synonyms":[{"name":"increased actin fusion focus diameter","type":"exact"},{"name":"increased actin fusion focus width","type":"exact"},{"name":"wider actin fusion focus","type":"exact"}],"termid":"FYPO:0007683"}


id: PBO:0081021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C2HC-type containing 1C","termid":"PBO:0081021"}


id: PBO:0059853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 6","termid":"PBO:0059853"}


id: PBO:0055100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2518","termid":"PBO:0055100"}


id: MONDO:0018586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"zinc-responsive necrolytic acral erythema","secondary_identifiers":["GARD:21825","UMLS:C4546437","SCTID:762543009","Orphanet:439196","MEDGEN:1613901"],"synonyms":[{"name":"NAE","type":"exact"},{"name":"necrolytic acral erythema","type":"exact"}],"termid":"MONDO:0018586","xrefs":{"Monarch":{"xref_id":"0018586"}}}


id: MONDO:0022557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar disorder","termid":"MONDO:0002427"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Behrens Baumann dust syndrome","secondary_identifiers":["UMLS:C2931582","GARD:4021","MEDGEN:444092","MESH:C537670"],"synonyms":[{"name":"Behrens-Baumann-Vogel syndrome","type":"exact"},{"name":"microphthalmia-optic nerve dysplasia","type":"related"},{"name":"oculo-cerebral dysplasia","type":"exact"},{"name":"unilateral aplasia of the optic nerve with cryptophthalmus and contralateral microphthalmus","type":"related"}],"termid":"MONDO:0022557","xrefs":{"Monarch":{"xref_id":"0022557"}}}


id: GO:0018511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-2,3-dihydroxy-2,3-dihydro-p-cumate + NAD+ = 2,3-dihydroxy-p-cumate + H+ + NADH.","definition_xrefs":["RHEA:23772","EC:1.3.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-665","UM-BBD_reactionID:r0396","KEGG_REACTION:R05240"],"synonyms":[{"name":"cis-2,3-dihydroxy-2,3-dihydro-p-cumate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018511"}


id: PR:O74897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swc5 gene.","definition_xrefs":["UniProtKB:O74897","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1-complex protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.13","synonyms":[{"name":"Spom972h-swc5","type":"exact"}],"termid":"PR:O74897"}


id: PBO:0067895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 197","termid":"PBO:0067895"}


id: PBO:0075366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX5 antisense RNA 1","termid":"PBO:0075366"}


id: MONDO:0009490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Papillon-Lefevre syndrome (PLS) is a rare ectodermal dysplasia characterized by palmoplantar keratoderma associated with early-onset periodontitis.","definition_xrefs":["Orphanet:678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodontal disorder","termid":"MONDO:0002635"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"functional neutrophil defect","termid":"MONDO:0015978"},{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"disorder of lysosomal-related organelles","termid":"MONDO:0017739"},{"relation_name":"is_a","term_name":"CTSC-related disorder","termid":"MONDO:0800465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005066","MONDO:0005570","MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"Papillon-Lefevre disease","secondary_identifiers":["OMIM:245000","DOID:3389","GARD:3100","MEDGEN:45306","NORD:1552","UMLS:C0030360","ICD9:759.89","NCIT:C84992","SCTID:40158001","MESH:D010214"],"synonyms":[{"name":"Keratoris palmoplantaris with periodontopathia","type":"related"},{"name":"PALS","type":"related"},{"name":"PAPILLON-Lefevre syndrome","type":"related"},{"name":"PLS","type":"exact"},{"name":"Papillon Lefevre syndrome","type":"exact"},{"name":"Papillon Lefèvre Syndrome","type":"exact"},{"name":"Papillon-LEFèvre syndrome","type":"related"},{"name":"Papillon-Lefvre syndrome","type":"exact"},{"name":"Pls","type":"related"},{"name":"hyperkeratosis palmoplantaris with periodontosis","type":"related"},{"name":"keratosis palmoplantar - periodontopathy","type":"related"},{"name":"keratosis palmoplantar-periodontopathy syndrome","type":"exact"},{"name":"keratosis palmoplantaris with periodontopathia","type":"related"},{"name":"palmar-plantar hyperkeratosis and concomitant periodontal destruction","type":"related"},{"name":"palmoplantar keratoderma with periodontosis","type":"related"}],"termid":"MONDO:0009490","xrefs":{"Monarch":{"xref_id":"0009490"}}}


id: GO:0044334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in the positive regulation of epithelial cell to mesenchymal cell transition.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of epithelial to mesenchymal transition (obsolete GO:0044334)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of epithelial to mesenchymal transition","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of epithelial to mesenchymal transition","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of epithelial to mesenchymal transition","type":"exact"}],"termid":"GO:0044334"}


id: PBO:0088949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Fyv7","termid":"PBO:0088949"}


id: PBO:0040468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase mitochondrial F1 complex assembly factor 2","termid":"PBO:0040468"}


id: FYPO:0002886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to heavy metal stress. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal transcription during cellular response to heavy metal stress","synonyms":[{"name":"normal transcription during cellular response to heavy metal stress during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to heavy metal stress during vegetative growth","type":"exact"},{"name":"normal transcription in response to heavy metal stress","type":"exact"}],"termid":"FYPO:0002886"}


id: FYPO:0004686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to streptothricin. Cells stop growing (and may die) at a concentration of streptothricin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to streptothricin","synonyms":[{"name":"hypersensitive to streptothricin","type":"exact"},{"name":"sensitive to streptothricin during mitotic cell cycle","type":"related"},{"name":"sensitive to streptothricin during vegetative growth","type":"exact"}],"termid":"FYPO:0004686"}


id: FYPO:0003088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal replication fork arrest","synonyms":[{"name":"abnormal replication fork arrest during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork arrest during vegetative growth","type":"exact"}],"termid":"FYPO:0003088"}


id: GO:0005355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of the hexose monosaccharide glucose from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete glucose transmembrane transporter activity (obsolete GO:0005355)","secondary_identifiers":["Reactome:R-HSA-499981","Reactome:R-HSA-5653873"],"synonyms":[{"name":"galactose/glucose (methylgalactoside) porter activity","type":"related"},{"name":"glucose permease activity","type":"exact"},{"name":"glucose transmembrane transporter activity","type":"exact"},{"name":"lactose/glucose efflux transporter activity","type":"narrow"}],"termid":"GO:0005355"}


id: PBO:0047997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXM1-regulated, gastric cancer associated","termid":"PBO:0047997"}


id: PBO:0079874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A pseudogene 1","termid":"PBO:0079874"}


id: SO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA region enriched in DNA loop anchors and across which DNA loops occur less often than expected by chance.","definition_xrefs":["PMID:32782014","GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"topologically_associated_domain","termid":"SO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topologically_associated_domain_boundary","synonyms":[{"name":"TAD boundary","type":"exact"},{"name":"TAD_boundary","type":"exact"},{"name":"topologically associated domain boundary","type":"exact"}],"termid":"SO:0002305"}


id: PBO:0042005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 60","termid":"PBO:0042005"}


id: GO:1902147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to cytokinesis checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to cell cycle checkpoint signaling","termid":"GO:1902145"},{"relation_name":"regulates","term_name":"response to cytokinesis checkpoint signaling","termid":"GO:0072399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cytokinesis checkpoint signaling","secondary_identifiers":["GO:1902149"],"synonyms":[{"name":"regulation of cytokinesis checkpoint effector process","type":"exact"},{"name":"regulation of response to signal involved in cytokinesis checkpoint","type":"exact"}],"termid":"GO:1902147"}


id: GO:0044329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in the positive regulation of cell to cell adhesion.","definition_xrefs":["GOC:jl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of cell-cell adhesion (obsolete GO:0044329)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of cell-cell adhesion","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of cell-cell adhesion","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of cell-cell adhesion","type":"exact"}],"termid":"GO:0044329"}


id: GO:0050460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NH3 + NAD+ + H2O = hydroxylamine + NADH + H+.","definition_xrefs":["EC:1.7.1.10","MetaCyc:HYDROXYLAMINE-REDUCTASE-NADH-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hydroxylamine reductase (NADH) activity","secondary_identifiers":["RHEA:20581"],"synonyms":[{"name":"N-hydroxy amine reductase activity","type":"related"},{"name":"NADH-hydroxylamine reductase activity","type":"related"},{"name":"NADH2:hydroxylamine oxidoreductase activity","type":"related"},{"name":"NADH:hydroxylamine oxidoreductase activity","type":"related"},{"name":"ammonium dehydrogenase activity","type":"related"},{"name":"ammonium:NAD+ oxidoreductase activity","type":"related"},{"name":"hydroxylamine reductase (NADH2)","type":"related"}],"termid":"GO:0050460"}


id: GO:0015935
data:
  {"annotated_genes":["SJAG_04378","SJAG_00860","SJAG_03762","SJAG_04814","SJAG_02340","SJAG_01767","SJAG_00782","SJAG_00544","SJAG_04256","SJAG_01468","SJAG_04173","SJAG_01734","SJAG_00465","SJAG_02280","SJAG_02522","SJAG_01132","SJAG_04324","SJAG_04188","SJAG_02861","SJAG_04494","SJAG_04918","SJAG_01609","SJAG_01366","SJAG_04281","SJAG_04788","SJAG_02643","SJAG_00628","SJAG_00105","SJAG_01226","SJAG_02324","SJAG_03034","SJAG_03424","SJAG_04695","SJAG_04029","SJAG_02452","SJAG_00060","SJAG_02046","SJAG_02682","SJAG_01296","SJAG_02803","SJAG_02201","SJAG_00503","SJAG_03065","SJAG_02253","SJAG_04998","SJAG_02020","SJAG_00148","SJAG_00944","SJAG_04174","SJAG_05320","SJAG_04672","SJAG_02894","SJAG_04746","SJAG_02067","SJAG_02870","SJAG_01387","SJAG_02477","SJAG_03053","SJAG_03422","SJAG_02184","SJAG_02777","SJAG_04663","SJAG_01287","SJAG_00468","SJAG_02904","SJAG_03262","SJAG_01548","SJAG_01632","SJAG_00733","SJAG_01512","SJAG_00523","SJAG_00069","SJAG_02749","SJAG_02224","SJAG_03254","SJAG_04753","SJAG_02335","SJAG_04168","SJAG_04204","SJAG_04164","SJAG_03859","SJAG_02585","SJAG_01520","SJAG_00889","SJAG_04342","SJAG_03584","SJAG_00513","SJAG_04476","SJAG_04475","SJAG_02359","SJAG_03568","SJAG_02479"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74998,79683,73061,74220,70950,78341,101349,74275,101350,73868,74559,76376,74811,73243,99844,113986,73636,105228,74295,79935,73096,105227,70180,71754,99593,78228,74325,76977,106505,75690,69806,113218,116086,74566,75002,113985,77596,73493,76890,76384,116085,73408,91394,58736,73333,78253,70599,70893,94549,78839,99594,75777,70968,113219,105202,69621,68433,105201,80081,72437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022627"},{"annotations":[73833,97784,78114,102106,112152,115806,72151,108383,75624,95716,102873,91873,73041,109926,110177,103796,72394,105833,117874,107877,89719,98016,73882,108135,106194,94282,93985,110457,115382,96423,97783,76318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"The smaller of the two subunits of a ribosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal subunit","termid":"GO:0044391"}],"gene_count":92,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00069":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00465":null,"SJAG_00468":null,"SJAG_00503":null,"SJAG_00513":null,"SJAG_00523":null,"SJAG_00544":null,"SJAG_00628":null,"SJAG_00733":null,"SJAG_00782":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01132":null,"SJAG_01226":null,"SJAG_01287":null,"SJAG_01296":null,"SJAG_01366":null,"SJAG_01387":null,"SJAG_01468":null,"SJAG_01512":null,"SJAG_01520":null,"SJAG_01548":null,"SJAG_01609":null,"SJAG_01632":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_02020":null,"SJAG_02046":null,"SJAG_02067":null,"SJAG_02184":null,"SJAG_02201":null,"SJAG_02224":null,"SJAG_02253":null,"SJAG_02280":null,"SJAG_02324":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02522":null,"SJAG_02585":null,"SJAG_02643":null,"SJAG_02682":null,"SJAG_02749":null,"SJAG_02777":null,"SJAG_02803":null,"SJAG_02861":null,"SJAG_02870":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_03034":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03254":null,"SJAG_03262":null,"SJAG_03422":null,"SJAG_03424":null,"SJAG_03568":null,"SJAG_03584":null,"SJAG_03762":null,"SJAG_03859":null,"SJAG_04029":null,"SJAG_04164":null,"SJAG_04168":null,"SJAG_04173":null,"SJAG_04174":null,"SJAG_04188":null,"SJAG_04204":null,"SJAG_04256":null,"SJAG_04281":null,"SJAG_04324":null,"SJAG_04342":null,"SJAG_04378":null,"SJAG_04475":null,"SJAG_04476":null,"SJAG_04494":null,"SJAG_04663":null,"SJAG_04672":null,"SJAG_04695":null,"SJAG_04746":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04814":null,"SJAG_04918":null,"SJAG_04998":null,"SJAG_05320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"small ribosomal subunit","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal small subunit","type":"exact"}],"termid":"GO:0015935","terms_by_termid":{"GO:0005763":null,"GO:0022627":null}}


id: PBO:0018198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone (predicted)","termid":"PBO:0018198"}


id: GO:0060047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multicellular organismal process in which the heart decreases in volume in a characteristic way to propel blood through the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart process","termid":"GO:0003015"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart contraction","synonyms":[{"name":"cardiac contraction","type":"related"},{"name":"heart beating","type":"exact"},{"name":"hemolymph circulation","type":"related"}],"termid":"GO:0060047"}


id: MONDO:0009557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, autosomal recessive inherited disorder caused by mutations in the LMNA gene. It is characterized by growth retardation, craniofacial abnormalities with mandibular hypoplasia, skeletal abnormalities with progressive osteolysis of the distal phalanges and clavicles, and mottled or patchy skin pigmentation. The affected individuals have a marked acral loss of adipose tissue with normal or increased adipose tissue in the neck and trunk.","definition_xrefs":["NCIT:C123417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mandibuloacral dysplasia","termid":"MONDO:0016584"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"mandibuloacral dysplasia with type A lipodystrophy","secondary_identifiers":["OMIM:248370","GARD:3374","icd11.foundation:1756335062","UMLS:C5399785","MEDGEN:1757618","DOID:0081128","Orphanet:90153","SCTID:109419009","MESH:C535705"],"synonyms":[{"name":"MADA","type":"related"},{"name":"MANDIBULOACRAL dysplasia with type A lipodystrophy","type":"related"},{"name":"Mandibuloacral dysplasia with type a lipodystrophy, atypical","type":"related"},{"name":"craniomandibular Dermatodysostosis","type":"related"},{"name":"lipodystrophy, type A, associated with Mandibuloacral dysplasia","type":"related"},{"name":"mandibuloacral dysplasia","type":"broad"},{"name":"mandibuloacral dysplasia with type A lipodystrophy","type":"exact"}],"termid":"MONDO:0009557","xrefs":{"Monarch":{"xref_id":"0009557"}}}


id: GO:0046477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramide metabolic process","termid":"GO:0006677"},{"relation_name":"is_a","term_name":"glycosphingolipid catabolic process","termid":"GO:0046479"},{"relation_name":"is_a","term_name":"ceramide catabolic process","termid":"GO:0046514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycosylceramide catabolic process","synonyms":[{"name":"glycosylceramide breakdown","type":"exact"},{"name":"glycosylceramide catabolism","type":"exact"},{"name":"glycosylceramide degradation","type":"exact"}],"termid":"GO:0046477"}


id: PBO:0028630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U6_2'-O-snRNA_methylation_at_residue_A41","termid":"PBO:0028630"}


id: GO:2000706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dense core granule biogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of dense core granule biogenesis","termid":"GO:2000705"},{"relation_name":"negatively_regulates","term_name":"dense core granule biogenesis","termid":"GO:0061110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of dense core granule biogenesis","termid":"GO:2000706"}


id: PBO:0003953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma2 (predicted)","termid":"PBO:0003953"}


id: GO:0018620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + phthalate = cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylate + NAD+.","definition_xrefs":["RHEA:17489","EC:1.14.12.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phthalate 4,5-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0102","KEGG_REACTION:R03630","MetaCyc:PHTHALATE-45-DIOXYGENASE-RXN"],"synonyms":[{"name":"PDO activity","type":"related"},{"name":"phthalate dioxygenase activity","type":"broad"},{"name":"phthalate,NADH:oxygen oxidoreductase (4,5-hydroxylating)","type":"related"}],"termid":"GO:0018620"}


id: PBO:0067670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 850, pseudogene","termid":"PBO:0067670"}


id: PBO:0073458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein A1","termid":"PBO:0073458"}


id: PBO:0075137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide A'","termid":"PBO:0075137"}


id: PBO:0078481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-1","termid":"PBO:0078481"}


id: PBO:0078759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 2","termid":"PBO:0078759"}


id: PBO:0086915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative zinc cluster protein, predicted to be a transcription factor; not an essential gene; EDS1 has a paralog, RGT1, that arose from the whole genome duplication","termid":"PBO:0086915"}


id: PBO:0004807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetohydroxyacid reductoisomerase (predicted)","termid":"PBO:0004807"}


id: GO:0007096
data:
  {"annotated_genes":["SJAG_03126","SJAG_04464","SJAG_04943","SJAG_03048","SJAG_01050","SJAG_00082","SJAG_01801"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69950,110806],"is_not":false,"summary":null,"term":"GO:0007096"},{"annotations":[67662,102161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001100"},{"annotations":[93547,102168,89786,111754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031536"}]},"cv_name":"biological_process","definition":"Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity.","definition_xrefs":["GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle phase transition","termid":"GO:1901990"},{"relation_name":"regulates","term_name":"exit from mitosis","termid":"GO:0010458"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01050":null,"SJAG_01801":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04464":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044772"],"is_obsolete":false,"name":"regulation of exit from mitosis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-176409"],"termid":"GO:0007096","terms_by_termid":{"GO:0001100":null,"GO:0007096":null,"GO:0031536":null}}


id: PBO:0034255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lays_eggs_in","termid":"PBO:0034255"}


id: GO:0070490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a Pup protein is conjugated to a target protein via an isopeptide bond between the carboxy-terminus of Pup and the epsilon-amino group of a lysine residue of the target protein.","definition_xrefs":["PMID:18980670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein pupylation","synonyms":[{"name":"Pup-protein conjugation","type":"exact"},{"name":"pupylation","type":"exact"}],"termid":"GO:0070490"}


id: PBO:0034551
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_subtelomeric_chromatin_knob_formation","termid":"PBO:0034551"}


id: MONDO:0033620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myofibrillar myopathy 10","secondary_identifiers":["MEDGEN:1769385","OMIM:619040","UMLS:C5436656","DOID:0112108"],"synonyms":[{"name":"MFM10","type":"exact"}],"termid":"MONDO:0033620","xrefs":{"Monarch":{"xref_id":"0033620"}}}


id: GO:0015538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sialate(out) + H+(out) = sialate(in) + H+(in).","definition_xrefs":["TC:2.A.1.12.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialic acid transmembrane transporter activity","termid":"GO:0015136"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sialic acid:proton symporter activity","secondary_identifiers":["Reactome:R-HSA-428585","RHEA:28987","Reactome:R-HSA-5624239","MetaCyc:TRANS-RXN-25"],"synonyms":[{"name":"sialic acid permease activity","type":"related"},{"name":"sialic acid:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015538"}


id: FYPO:0006532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is normal (i.e. indistinguishable from wild type) during prophase of the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"normal protein localization to centromere during meiotic prophase II","synonyms":[{"name":"normal protein localisation to centromere during meiotic prophase II","type":"exact"},{"name":"normal protein localisation to centromere during prophase II","type":"exact"},{"name":"normal protein localization to chromosome, centric region during meiotic prophase II","type":"exact"},{"name":"normal protein localization to chromosome, centromeric region during prophase II","type":"exact"}],"termid":"FYPO:0006532"}


id: GO:0001965
data:
  {"annotated_genes":["SJAG_02027"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72211],"is_not":false,"summary":null,"term":"GO:0001965"}]},"cv_name":"molecular_function","definition":"Binding to a G-protein alpha subunit. The alpha subunit binds a guanine nucleotide.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"G-protein alpha-subunit binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"G-alpha protein subunit binding","type":"exact"}],"termid":"GO:0001965","terms_by_termid":{"GO:0001965":null}}


id: GO:0018893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dibenzofuran, a substance composed of two benzene rings linked by one ether bond and one carbon-carbon bond. Dibenzofuran is a white crystalline solid created from the production of coal tar and used as an insecticide and an intermediate in the production of other chemicals.","definition_xrefs":["GOC:ai","UM-BBD_pathwayID:dbf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dibenzofuran metabolic process","synonyms":[{"name":"dibenzofuran metabolism","type":"exact"}],"termid":"GO:0018893"}


id: PBO:0027939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_reactive_oxygen_species_level_in_stationary_phase","termid":"PBO:0027939"}


id: MONDO:0009565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by intellectual deficit, marfanoid habitus, microcephaly, and glomerulonephritis.","definition_xrefs":["Orphanet:2172"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-glomerulonephritis-marfanoid habitus syndrome","secondary_identifiers":["UMLS:C1855348","MEDGEN:343327","OMIM:248760","GARD:3615","MESH:C565411"],"synonyms":[{"name":"MARFANOID habitus with microcephaly and glomerulonephritis","type":"related"},{"name":"microcephaly glomerulonephritis Marfanoid habitus","type":"related"}],"termid":"MONDO:0009565","xrefs":{"Monarch":{"xref_id":"0009565"}}}


id: PBO:0059574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 2A","termid":"PBO:0059574"}


id: PBO:0000441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF5 (predicted)","termid":"PBO:0000441"}


id: PR:O42877
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fcf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein fcf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.15c","synonyms":[{"name":"Spom972h-fcf2","type":"exact"}],"termid":"PR:O42877"}


id: GO:0044852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which chromatin structure of nonrepetitive regions of DNA is compacted prior to and during mitosis in eukaryotic cells.","definition_xrefs":["GOC:jl","PMID:10811823"],"gene_count":0,"genotype_count":0,"name":"obsolete nonrepetitive DNA condensation (obsolete GO:0044852)","synonyms":[{"name":"nonrepetitive DNA packaging","type":"exact"}],"termid":"GO:0044852"}


id: GO:0070608
data:
  {"annotated_genes":["SJAG_00424","SJAG_00610","SJAG_04666","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89227,102641,94732,92222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of (1->3)-alpha-glucan biosynthetic process","termid":"GO:0070606"},{"relation_name":"is_a","term_name":"regulation of cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070607"},{"relation_name":"regulates","term_name":"cell wall (1->3)-alpha-glucan biosynthetic process","termid":"GO:0070598"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cell wall (1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell wall 1,3-alpha-glucan anabolism","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan formation","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan synthesis","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan anabolism","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan biosynthesis","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan biosynthetic process","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan formation","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0070608","terms_by_termid":{"GO:0070610":null}}


