# terms

id: GO:0071354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-6 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-6","termid":"GO:0070741"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-6","synonyms":[{"name":"cellular response to IL-6","type":"exact"}],"termid":"GO:0071354"}


id: GO:0110113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of lipid transporter activity.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:rph","PMID:27365390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of transporter activity","termid":"GO:0032411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of lipid transporter activity","termid":"GO:0110113"}


id: MONDO:0017920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deafness-genital anomalies-metacarpal and metatarsal synostosis syndrome is characterized by sensorineural deafness, bilateral synostosis of the 4th and 5th metacarpals and metatarsals, genital anomalies (hypospadias in males), psychomotor delay and abnormal dermatoglyphics. So far, it has been described in two unrelated patients. Facial dysmorphism was noted in both patients (prominent forehead, ear anomalies, facial asymmetry and an open mouth appearance).","definition_xrefs":["Orphanet:3224"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-genital anomalies-metacarpal and metatarsal synostosis syndrome","secondary_identifiers":["UMLS:C2931654","GARD:4303","MEDGEN:419464","SCTID:721086004","MESH:C537887"],"synonyms":[{"name":"Pfeiffer Kapferer syndrome","type":"related"},{"name":"Pfeiffer-Kapferer syndrome","type":"exact"},{"name":"sensorineural deafness, hypospadias, and synostosis of metacarpals and metatarsals 4 and 5","type":"related"},{"name":"short stature, intellectual disability and multiple dysmorphisms","type":"related"},{"name":"short stature, mental retardation and multiple dysmorphisms","type":"related"}],"termid":"MONDO:0017920","xrefs":{"Monarch":{"xref_id":"0017920"}}}


id: GO:0015851
data:
  {"annotated_genes":["SJAG_03777","SJAG_03970","SJAG_04714","SJAG_04717","SJAG_00760","SJAG_02147"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77886],"is_not":false,"summary":null,"term":"GO:0015851"},{"annotations":[112337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"},{"annotations":[112338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[114942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140140"},{"annotations":[87880],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[88222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904082"},{"annotations":[95329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"},{"annotations":[79770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042906"}]},"cv_name":"biological_process","definition":"The directed movement of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00760":null,"SJAG_02147":null,"SJAG_03777":null,"SJAG_03970":null,"SJAG_04714":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"nucleobase transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase transmembrane transport","type":"exact"}],"termid":"GO:0015851","terms_by_termid":{"GO:0015851":null,"GO:0042906":null,"GO:0098702":null,"GO:0098710":null,"GO:0098721":null,"GO:0140140":null,"GO:1904082":null,"GO:1905530":null}}


id: PBO:0077268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM9 domain family member B","termid":"PBO:0077268"}


id: GO:0099000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont's genome into the host cell through the host cell envelope via a contractile tail ejection system consisting of a baseplate, a central tube and an external contractile sheath. Upon binding to the host cell surface, the baseplate changes its conformation and triggers sheath contraction, driving the rigid internal tail tube through the cell envelope. Occurs in non-enveloped prokaryotic viruses.","definition_xrefs":["GOC:dos","PMID:26283379","VZ:3950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont genome ejection through host cell envelope","termid":"GO:0039678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont genome ejection through host cell envelope, contractile tail mechanism","synonyms":[{"name":"viral contractile tail ejection system","type":"exact"},{"name":"viral genome ejection through host cell envelope, contractile tail mechanism","type":"related"}],"termid":"GO:0099000"}


id: MONDO:0006779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized bulging or dilatation in the muscle wall of a heart (myocardium), usually in the left ventricle. Blood-filled aneurysms are dangerous because they may burst. Fibrous aneurysms interfere with the heart function through the loss of contractility. True aneurysm is bound by the vessel wall or cardiac wall. False aneurysms are hematoma caused by myocardial rupture.","definition_xrefs":["MESH:D006322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"heart aneurysm","secondary_identifiers":["ICD9:414.10","ICD9:414.19","NANDO:2200234","ICD10CM:I25.3","MedDRA:10002350","MEDGEN:42360","EFO:1000959","DOID:9768","SCTID:65340007","UMLS:C0018789"],"synonyms":[{"name":"cardiac aneurysm","type":"exact"}],"termid":"MONDO:0006779","xrefs":{"Monarch":{"xref_id":"0006779"}}}


id: GO:0031033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a filament composed of myosin molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"myosin filament organization","synonyms":[{"name":"myosin filament assembly or disassembly","type":"related"},{"name":"myosin filament organisation","type":"exact"},{"name":"myosin polymerization or depolymerization","type":"related"}],"termid":"GO:0031033"}


id: PR:Q9UTL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribose-5-phosphate isomerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01935","PANTHER:PTHR11934:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-5-phosphate isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.12","secondary_identifiers":["UniProtKB:Q9UTL3"],"synonyms":[{"name":"D-ribose-5-phosphate ketol-isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Phosphoriboisomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RPIA","type":"exact"}],"termid":"PR:Q9UTL3"}


id: PBO:0040295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3","termid":"PBO:0040295"}


id: MONDO:0009855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic disorder that affects the ability of the body to effectively break down fat from our diet. It is typically characterized by hypotonia (low muscle tone) and seizures in the newborn period. Other symptoms include unusual facial features and an enlarged liver (hepatomegaly). Most babies with this condition nevergain anydevelopmental skills and do not survive past the age of 2. DBP deficiency is caused by mutations in the HSD17B4 gene and is inherited in an autosomal recessive manner. Some researchers have suggested classifying DBP deficiency into three subtypes, depending on how severely the mutation in the HSD17B4 gene affects the function of the gene and the protein that it codes for. Almost all individuals with types I, II, and III have similar signs and symptoms. A fourth subtype has additionally been proposed for individuals that have less severe symptoms. While there is no cure for DBP deficiency, treatment is focused on improving nutrition and growth, controlling symptoms, and limiting the progression of liver disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"d-bifunctional protein deficiency","secondary_identifiers":["MEDGEN:137982","DOID:0090031","GARD:4539","SCTID:238068007","NANDO:1200766","OMIM:261515","ICD9:277.6","Orphanet:300","NCIT:C119676","UMLS:C0342870"],"synonyms":[{"name":"17-beta-hydroxysteroid dehydrogenase 4 deficiency","type":"related"},{"name":"17-beta-hydroxysteroid dehydrogenase IV deficiency","type":"related"},{"name":"D-bifunctional enzyme deficiency","type":"exact"},{"name":"DBP deficiency","type":"related"},{"name":"HSD17B4 deficiency","type":"exact"},{"name":"Pbfe deficiency","type":"related"},{"name":"bifunctional enzyme deficiency","type":"related"},{"name":"d-bifunctional protein deficiency","type":"exact"},{"name":"multifunctional enzyme deficiency","type":"exact"},{"name":"peroxisomal bifunctional enzyme deficiency","type":"related"},{"name":"peroxisomal multifunctional enzyme (MFE2) deficiency","type":"exact"},{"name":"peroxisomal multifunctional enzyme deficiency","type":"exact"},{"name":"pseudo-Zellweger syndrome","type":"exact"}],"termid":"MONDO:0009855","xrefs":{"Monarch":{"xref_id":"0009855"}}}


id: GO:0015888
data:
  {"annotated_genes":["SJAG_02962","SJAG_04673","SJAG_00835","SJAG_03652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[100479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[89936,89935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of thiamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Thiamine is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"thiamine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thiamin transport","type":"exact"},{"name":"vitamin B1 transport","type":"exact"}],"termid":"GO:0015888","terms_by_termid":{"GO:0071934":null,"GO:0140125":null,"GO:1990545":null}}


id: FYPO:0005356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which site-specific DNA replication termination at RTS1 barrier in the mating type region does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal site-specific DNA replication termination at RTS1 barrier","termid":"FYPO:0005355"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished site-specific DNA replication termination at RTS1 barrier","synonyms":[{"name":"abolished site-specific DNA replication termination at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"abolished site-specific DNA replication termination at RTS1 barrier during vegetative growth","type":"exact"},{"name":"site-specific DNA replication termination at RTS1 barrier abolished","type":"exact"}],"termid":"FYPO:0005356"}


id: PBO:0003093
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconate dehydrogenase deficiency","termid":"PBO:0003093"}


id: GO:0006181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGMP, deoxyguanosine monophosphate (2'-deoxyguanosine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"dGMP metabolic process","termid":"GO:0046054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dGMP biosynthetic process","synonyms":[{"name":"dGMP anabolism","type":"exact"},{"name":"dGMP biosynthesis","type":"exact"},{"name":"dGMP formation","type":"exact"},{"name":"dGMP synthesis","type":"exact"}],"termid":"GO:0006181"}


id: PBO:0036424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone activator Aha1","termid":"PBO:0036424"}


id: MONDO:0000921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm involving the ampulla of Vater.","definition_xrefs":["NCIT:C4443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common bile duct neoplasm","termid":"MONDO:0006709"},{"relation_name":"is_a","term_name":"tumor of duodenum","termid":"MONDO:0021375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"ampulla of vater neoplasm","secondary_identifiers":["ONCOTREE:AMPULLAOFVATER","DOID:10022","MEDGEN:138029","SCTID:126858004","UMLS:C0345916"],"synonyms":[{"name":"AMPULLAOFVATER","type":"related"},{"name":"ampulla of Vater tumor","type":"exact"},{"name":"ampulla of Vater tumour","type":"exact"},{"name":"hepatopancreatic ampulla neoplasm","type":"exact"},{"name":"hepatopancreatic ampulla neoplasm (disease)","type":"exact"},{"name":"hepatopancreatic ampulla tumor","type":"exact"},{"name":"hepatopancreatic ampulla tumour","type":"exact"},{"name":"neoplasm of ampulla of Vater","type":"exact"},{"name":"neoplasm of hepatopancreatic ampulla","type":"exact"},{"name":"neoplasm of the ampulla of Vater","type":"exact"},{"name":"tumor of ampulla of Vater","type":"exact"},{"name":"tumor of hepatopancreatic ampulla","type":"exact"},{"name":"tumor of the ampulla of Vater","type":"exact"},{"name":"tumour of ampulla of Vater","type":"exact"},{"name":"tumour of hepatopancreatic ampulla","type":"exact"},{"name":"tumour of the ampulla of Vater","type":"exact"}],"termid":"MONDO:0000921","xrefs":{"Monarch":{"xref_id":"0000921"}}}


id: PBO:0049125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor class C group 5 member B","termid":"PBO:0049125"}


id: PBO:0090184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proline metabolism regulator","termid":"PBO:0090184"}


id: MONDO:0002678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from the deep soft tissues in children. It is characterized by the presence of spindle-shaped fibroblasts and collagenous stroma formation in a herringbone growth pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrosarcoma","termid":"MONDO:0005164"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric fibrosarcoma","secondary_identifiers":["MEDGEN:124685","UMLS:C0279981","NCIT:C8088","NANDO:2200060","DOID:3520"],"synonyms":[{"name":"childhood fibrosarcoma","type":"exact"},{"name":"fibrosarcoma","type":"broad"},{"name":"pediatric fibrosarcoma","type":"exact"}],"termid":"MONDO:0002678","xrefs":{"Monarch":{"xref_id":"0002678"}}}


id: GO:0141072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with, inhibits or disrupts a tumor necrosis factor-mediated signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:11805081","PMID:24736233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host tumor necrosis factor-mediated signaling pathway","synonyms":[{"name":"disruption of host TNF-mediated signaling pathway","type":"exact"},{"name":"disruption of host TNFR-mediated signaling pathway","type":"exact"},{"name":"disruption of host tumor necrosis factor receptor-mediated signaling pathway","type":"exact"},{"name":"disruption of host tumor necrosis factor-mediated signaling pathway","type":"exact"}],"termid":"GO:0141072"}


id: GO:0042937
data:
  {"annotated_genes":["SJAG_01660","SJAG_01983","SJAG_03577"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71695],"is_not":false,"summary":null,"term":"GO:0042937"},{"annotations":[95318,112925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034634"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a tripeptide, a compound containing three amino acids linked together by peptide bonds, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01660":null,"SJAG_01983":null,"SJAG_03577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"tripeptide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"tripeptide transporter activity","type":"related"}],"termid":"GO:0042937","terms_by_termid":{"GO:0034634":null,"GO:0042937":null}}


id: GO:0043045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A epigenetic process that happens during embryonic development that modulates gene expression potential at later stages of development of the organism, including the adult. Epigenetic regulation takes place via chromatin remodeling either by modifying higher order chromatin fiber structure, nucleosomal histones, or cytosine DNA methylation.","definition_xrefs":["GOC:go_curators","PMID:12138111","PMID:22868271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epigenetic regulation of gene expression","termid":"GO:0040029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"epigenetic programming of gene expression","synonyms":[{"name":"DNA methylation involved in embryo development","type":"related"},{"name":"de novo DNA methylation","type":"related"},{"name":"epigenetic regulation of embryonic gene expression","type":"related"},{"name":"post-fertilization epigenetic regulation of gene expression","type":"related"}],"termid":"GO:0043045"}


id: GO:0035506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of myosin light chain kinase activity.","definition_xrefs":["GOC:go_curators","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of myosin light chain kinase activity (obsolete GO:0035506)","termid":"GO:0035506"}


id: PR:Q9C105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone deacetylase complex subunit SAP130 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase-like protein PB1E7.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.04c","secondary_identifiers":["UniProtKB:Q9C105"],"synonyms":[{"name":"Spom972h-SAP130","type":"exact"}],"termid":"PR:Q9C105"}


id: PBO:0071885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 23","termid":"PBO:0071885"}


id: GO:0003408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the optic cup, a two-walled vesicle formed from the optic vesicle.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"optic cup morphogenesis involved in camera-type eye development","termid":"GO:0002072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic cup formation involved in camera-type eye development","termid":"GO:0003408"}


id: PBO:0015242
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(4)","termid":"PBO:0015242"}


id: PR:O74786
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec9 gene.","definition_xrefs":["UniProtKB:O74786","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.02c","synonyms":[{"name":"Spom972h-sec9","type":"exact"}],"termid":"PR:O74786"}


id: GO:0021833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction of a cell and the extracellular matrix involved in the directed tangential movement of cells mediated by cell-cell interactions in the developing cerebral cortex.","definition_xrefs":["PMID:12626695","GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"},{"relation_name":"part_of","term_name":"cerebral cortex tangential migration using cell-cell interactions","termid":"GO:0021823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-matrix adhesion involved in tangential migration using cell-cell interactions","termid":"GO:0021833"}


id: PBO:0031893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic10 (predicted)","termid":"PBO:0031893"}


id: PBO:0079785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A6","termid":"PBO:0079785"}


id: PBO:0013819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family protein Art1","termid":"PBO:0013819"}


id: MONDO:0013059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Aicardi-Goutieres syndrome in which the cause of the disease is a mutation in the SAMHD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Aicardi-Goutieres syndrome","termid":"MONDO:0018866"},{"relation_name":"is_a","term_name":"SAMHD1-related type 1 interferonopathy","termid":"MONDO:0700260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"Aicardi-Goutieres syndrome 5","secondary_identifiers":["GARD:10151","MESH:C535608","NANDO:2200897","UMLS:C2749659","MEDGEN:413116","NCIT:C168564","OMIM:612952"],"synonyms":[{"name":"AGS5","type":"related"},{"name":"Aicardi-Goutieres syndrome 5","type":"exact"},{"name":"Aicardi-Goutieres syndrome caused by mutation in SAMHD1","type":"exact"},{"name":"Aicardi-Goutieres syndrome type 5","type":"exact"},{"name":"SAMHD1 Aicardi-Goutieres syndrome","type":"exact"},{"name":"SAMHD1-related Aicardi-Goutieres syndrome","type":"related"}],"termid":"MONDO:0013059","xrefs":{"Monarch":{"xref_id":"0013059"}}}


id: MONDO:0004263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal tumor with multilayered rosettes, C19MC-altered that arises from the infratentorial region and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0002798"},{"relation_name":"is_a","term_name":"childhood infratentorial neoplasm","termid":"MONDO:0002915"},{"relation_name":"is_a","term_name":"infratentorial cancer","termid":"MONDO:0003107"},{"relation_name":"is_a","term_name":"intracranial primitive neuroectodermal tumor","termid":"MONDO:0003142"},{"relation_name":"is_a","term_name":"ependymoblastoma","termid":"MONDO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric infratentorial ependymoblastoma","secondary_identifiers":["NCIT:C6773","UMLS:C1332972","MEDGEN:272462","DOID:7522"],"synonyms":[{"name":"childhood infratentorial embryonal tumor with Multilayered Rosettes, C19MC-altered","type":"exact"},{"name":"childhood infratentorial embryonal tumour with Multilayered Rosettes, C19MC-altered","type":"exact"},{"name":"childhood infratentorial ependymoblastoma","type":"exact"},{"name":"pediatric infratentorial ependymoblastoma","type":"exact"}],"termid":"MONDO:0004263","xrefs":{"Monarch":{"xref_id":"0004263"}}}


id: MONDO:0008164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 1","secondary_identifiers":["DOID:0060920","UMLS:C4551901","MEDGEN:1639517","OMIM:166800"],"synonyms":[{"name":"OTS","type":"related"},{"name":"OTSC1","type":"exact"},{"name":"otosclerosis 1","type":"exact"}],"termid":"MONDO:0008164","xrefs":{"Monarch":{"xref_id":"0008164"}}}


id: PATO:0001887
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to having a strong affinity for water; tending to dissolve in, mix with, or be wetted by water.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrophilicity","termid":"PATO:0001886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrophilic","termid":"PATO:0001887"}


id: MONDO:0100416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly FLT3 tyrosine kinase domain point mutation. (Single nucleotide mutations in the tyrosine kinase domain encoded by the human FLT3 gene that are associated with acute myeloid leukemia and poor prognosis.)","definition_xrefs":["NCIT:C67495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, FLT3 tyrosine kinase domain point mutation","synonyms":[{"name":"AML, FLT3 tyrosine kinase domain point mutation","type":"exact"},{"name":"AML, FLT3-TKD Point Mutation","type":"exact"},{"name":"AML, FLT3/TKD Point Mutation","type":"exact"}],"termid":"MONDO:0100416","xrefs":{"Monarch":{"xref_id":"0100416"}}}


id: GO:2000061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ureter smooth muscle cell differentiation.","definition_xrefs":["GOC:obol","GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"regulates","term_name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ureter smooth muscle cell differentiation","termid":"GO:2000061"}


id: GO:0006100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving intermediates of the tricarboxylic acid cycle.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tricarboxylic acid cycle intermediate metabolic process (obsolete GO:0006100)","synonyms":[{"name":"Krebs cycle intermediate metabolic process","type":"exact"},{"name":"Krebs cycle intermediate metabolism","type":"exact"},{"name":"TCA intermediate metabolic process","type":"exact"},{"name":"TCA intermediate metabolism","type":"exact"},{"name":"citric acid cycle intermediate metabolic process","type":"exact"},{"name":"citric acid cycle intermediate metabolism","type":"exact"},{"name":"tricarboxylic acid cycle intermediate metabolic process","type":"exact"},{"name":"tricarboxylic acid cycle intermediate metabolism","type":"exact"}],"termid":"GO:0006100"}


id: PR:Q9P6P9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6P9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.11c","synonyms":[{"name":"Spom972h-pkp1","type":"exact"},{"name":"pyruvate dehydrogenase kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P9"}


id: MONDO:0100415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly FLT3 internal tandem duplication. (A genetic abnormality that arises from duplications of the juxtamembrane portion of the gene and results in constitutive activation of the FLT3 receptor tyrosine kinase protein in early hematopoietic progenitor cells. It is associated with acute myelogenous leukemia where it appears to correlate with a poor prognosis.)","definition_xrefs":["NCIT:C67494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, FLT3 internal tandem duplication","secondary_identifiers":["NCIT:C126748"],"synonyms":[{"name":"AML, Activating FLT3-ITD Gene Mutation","type":"exact"},{"name":"AML, Activating FLT3-ITD Mutation","type":"exact"},{"name":"AML, FLT3 ITD","type":"exact"},{"name":"AML, FLT3 internal tandem duplication","type":"exact"},{"name":"AML, FLT3-ITD","type":"exact"},{"name":"AML, FLT3-ITD Activating Mutation","type":"exact"},{"name":"AML, FLT3-ITD Mutation","type":"exact"},{"name":"AML, FLT3/ITD Mutation","type":"exact"}],"termid":"MONDO:0100415","xrefs":{"Monarch":{"xref_id":"0100415"}}}


id: PBO:0110421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIAL1 pseudogene","termid":"PBO:0110421"}


id: MONDO:0020782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic painless inflammation of the gums. It is characterized by erythema and edema of the gums and bleeding while brushing the teeth.","definition_xrefs":["NCIT:C34474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingivitis","termid":"MONDO:0002508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic gingivitis","secondary_identifiers":["MEDGEN:965","SCTID:72621003","UMLS:C0008684","ICD9:523.10","icd11.foundation:1542018172","ICD9:523.1"],"synonyms":[{"name":"Chronic Gingivitis","type":"related"},{"name":"Chronic gingivitis","type":"related"},{"name":"chronic gingivitis","type":"exact"}],"termid":"MONDO:0020782","xrefs":{"Monarch":{"xref_id":"0020782"}}}


id: MONDO:0014092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation of SLC1A1 on chromosome 9p24.2.","definition_xrefs":["DOID:0070093"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"schizophrenia","termid":"MONDO:0005090"},{"relation_name":"is_a","term_name":"schizophrenia, susceptibility to","termid":"MONDO:0100182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizophrenia 18","secondary_identifiers":["MEDGEN:815243","UMLS:C3808913","OMIM:615232"],"synonyms":[{"name":"SCZD18","type":"exact"},{"name":"chromosome 7q36.3 Duplication syndrome, 362-Kb","type":"exact"},{"name":"schizoaffective disorder","type":"related"},{"name":"schizophrenia 18","type":"exact"},{"name":"schizophrenia 18 with or without an affective disorder","type":"related"},{"name":"schizophrenia susceptibility 18","type":"exact"},{"name":"schizophrenia type 18","type":"exact"}],"termid":"MONDO:0014092","xrefs":{"Monarch":{"xref_id":"0014092"}}}


id: PBO:0012277
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombe methyltransferase","termid":"PBO:0012277"}


id: PBO:0085614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex; forms a subcomplex with Mcm4p and Mcm7p","termid":"PBO:0085614"}


id: PBO:0029131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_recombination","termid":"PBO:0029131"}


id: PBO:0026865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_double-strand_break_sites_during_mitotic_S_phase","termid":"PBO:0026865"}


id: PBO:0026855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_canavanine_and_rapamycin","termid":"PBO:0026855"}


id: PBO:0116251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in protein folding, human TAPT1 ortholog","termid":"PBO:0116251"}


id: GO:0099527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals that conveys information from the postsynapse to the nucleus via cytoskeletal transport of a protein from a postsynapse to the component to the nucleus where it affects biochemical processes that occur in the nucleus (e.g DNA transcription, mRNA splicing, or DNA/histone modifications).","definition_xrefs":["PMID:24317321","GOC:dos","PMID:25652077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic signal transduction","termid":"GO:0098926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"postsynapse to nucleus signaling pathway","synonyms":[{"name":"postsynaptic signaling to nucleus","type":"exact"}],"termid":"GO:0099527"}


id: SO:0001045
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A MGE region consisting of two fused plasmids resulting from a replicative transposition event.","definition_xrefs":["phigo:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cointegrated_plasmid","synonyms":[{"name":"cointegrated plasmid","type":"exact"},{"name":"cointegrated replicon","type":"exact"}],"termid":"SO:0001045"}


id: GO:0052482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of cell wall modification, in which the cell wall is reinforced and made thicker, that occurs as part of the defense response of an organism.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"cell wall thickening","termid":"GO:0052386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"defense response by cell wall thickening","synonyms":[{"name":"cell wall thickening during defense response","type":"related"}],"termid":"GO:0052482"}


id: FYPO:0009067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to amorolfine. Cells stop growing (and may die) at a concentration of amorolfine that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to amorolfine","synonyms":[{"name":"hypersensitive to amorolfine","type":"exact"},{"name":"sensitive to amorolfine during mitotic cell cycle","type":"related"},{"name":"sensitive to amorolfine during vegetative growth","type":"exact"}],"termid":"FYPO:0009067"}


id: PBO:0057435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 552","termid":"PBO:0057435"}


id: GO:1902649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2A-H2B dimer displacement.","definition_xrefs":["PMID:22199252","GOC:TermGenie","GOC:di","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2A-H2B dimer displacement (obsolete GO:1902649)","termid":"GO:1902649"}


id: PBO:0089698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain protein Bro1","termid":"PBO:0089698"}


id: MOD:01583
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01583"}


id: MONDO:0100024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the onset of seizures between 3 and 20 months of age (peak 6 months). Seizures may be frequent at onset but usually remit within 1 year from the onset. In untreated cases there can be isolated or brief clusters of seizures within the period from onset to remission. A minority of individuals may have epilepsy in later life. Some patients (with PRRT2 mutations) may develop paroxysmal kinesiogenic dyskinesia in later life.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neonatal/infantile epilepsy syndrome","termid":"MONDO:0100022"},{"relation_name":"is_a","term_name":"infantile-onset epilepsy","termid":"MONDO:0100207"},{"relation_name":"is_a","term_name":"neonatal/infantile-onset self-limited epilepsy syndrome","termid":"MONDO:0800488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"self-limited familial infantile epilepsy","synonyms":[{"name":"SeLFIE","type":"exact"},{"name":"self-limited familial and non-familial infantile seizures","type":"exact"}],"termid":"MONDO:0100024","xrefs":{"Monarch":{"xref_id":"0100024"}}}


id: MONDO:0001411
data:
  {"annotated_genes":["SJAG_02165","SJAG_04995","SJAG_03249","SJAG_02200","SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[84885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"},{"annotations":[85233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014558"},{"annotations":[85339,85340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009039"},{"annotations":[86412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013740"}]},"cv_name":"mondo","definition":"A disease characterized by abnormal union between adjacent bones or parts of a single bone formed by osseous material, such as ossified connecting cartilage or fibrous tissue.","definition_xrefs":["MESH:D013580","Wikipedia:Synostosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02165":null,"SJAG_02200":null,"SJAG_03249":null,"SJAG_04270":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"synostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:11689","UMLS:C0039093","DOID:11971"],"termid":"MONDO:0001411","terms_by_termid":{"MONDO:0008726":null,"MONDO:0009039":null,"MONDO:0013740":null,"MONDO:0014558":null,"MONDO:0020667":null},"xrefs":{"Monarch":{"xref_id":"0001411"}}}


id: GO:1900398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pyrimidine nucleotide biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide biosynthetic process","termid":"GO:0030809"},{"relation_name":"is_a","term_name":"regulation of pyrimidine nucleotide biosynthetic process","termid":"GO:1900397"},{"relation_name":"negatively_regulates","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"negative regulation of pyrimidine nucleotide biosynthetic process","synonyms":[{"name":"down regulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"down regulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"down regulation of pyrimidine nucleotide biosynthetic process","type":"exact"},{"name":"down regulation of pyrimidine nucleotide formation","type":"exact"},{"name":"down regulation of pyrimidine nucleotide synthesis","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide formation","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide synthesis","type":"exact"},{"name":"downregulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"downregulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"downregulation of pyrimidine nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of pyrimidine nucleotide formation","type":"exact"},{"name":"downregulation of pyrimidine nucleotide synthesis","type":"exact"},{"name":"inhibition of pyrimidine nucleotide anabolism","type":"exact"},{"name":"inhibition of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"inhibition of pyrimidine nucleotide biosynthetic process","type":"narrow"},{"name":"inhibition of pyrimidine nucleotide formation","type":"exact"},{"name":"inhibition of pyrimidine nucleotide synthesis","type":"exact"},{"name":"negative regulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"negative regulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of pyrimidine nucleotide formation","type":"exact"},{"name":"negative regulation of pyrimidine nucleotide synthesis","type":"exact"}],"termid":"GO:1900398"}


id: PBO:0027321
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_electron_transport,_NADH_to_ubiquinone","termid":"PBO:0027321"}


id: PBO:0002274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brix domain protein Rpf2 (predicted)","termid":"PBO:0002274"}


id: SO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a premature stop codon is gained in an upstream open reading frame.","definition_xrefs":["PMID:32461616","PMID:32926138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_stop_codon_variant","termid":"SO:0002386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_stop_codon_gain_variant","synonyms":[{"name":"uSTOP_gained","type":"exact"}],"termid":"SO:0002388"}


id: PBO:0030867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytokinesis","termid":"PBO:0030867"}


id: _global:reciprocal_of
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 reciprocal_of q2 if and only if : q1 and q2 are relational qualities and a phenotype e q1 e2 mutually implies a phenotype e2 q2 e.","definition_xrefs":["PATOC:CJM"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reciprocal_of","termid":"_global:reciprocal_of"}


id: PBO:0087274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET-domain lysine-N-methyltransferase; catalyzes the formation of dimethyllysine residues on the large ribosomal subunit proteins L23 (Rpl23Ap and Rpl23Bp) and monomethyllysine residues on L18 (Rps18Ap and Rps18Bp)","termid":"PBO:0087274"}


id: PBO:0047655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 7","termid":"PBO:0047655"}


id: GO:0061842
data:
  {"annotated_genes":["SJAG_01422","SJAG_04558","SJAG_03200","SJAG_01460","SJAG_02332","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111228,100404,112634,103253,89921,102613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140480"}]},"cv_name":"biological_process","definition":"Any process in which the microtubule organizing center is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["PMID:21281821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"microtubule organizing center localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MTOC localization","type":"exact"},{"name":"MTOC polarity","type":"narrow"},{"name":"microtubule organizing center polarity","type":"narrow"}],"termid":"GO:0061842","terms_by_termid":{"GO:0140480":null}}


id: PBO:0071847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 42","termid":"PBO:0071847"}


id: PBO:0078141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 20","termid":"PBO:0078141"}


id: MONDO:0015068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low or intermediate grade tumor with neuroendocrine differentiation that arises from the rectum.","definition_xrefs":["NCIT:C135213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system neuroendocrine tumor, grade 1/2","termid":"MONDO:0000386"},{"relation_name":"is_a","term_name":"rectum neuroendocrine neoplasm","termid":"MONDO:0003646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal neuroendocrine tumor","secondary_identifiers":["MEDGEN:1810164","UMLS:C5554035"],"synonyms":[{"name":"neuroendocrine tumor of rectum, well differentiated, low or intermediate grade","type":"exact"},{"name":"rectal well differentiated neuroendocrine neoplasm","type":"exact"},{"name":"rectal well-differentiated neuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0015068","xrefs":{"Monarch":{"xref_id":"0015068"}}}


id: PBO:0086692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced by treatment with 8-methoxypsoralen and UVA irradiation; null mutant is sensitive to expression of the top1-T722A allele; SWAT-GFP and mCherry fusion proteins localize to the cell periphery and vacuole; TDA6 has a paralog, VPS62, that arose from the whole genome duplication","termid":"PBO:0086692"}


id: PBO:0027994
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_activation_of_monopolar_cell_growth","termid":"PBO:0027994"}


id: GO:2000756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein acetylation","termid":"GO:1901983"},{"relation_name":"regulates","term_name":"peptidyl-lysine acetylation","termid":"GO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-lysine acetylation","termid":"GO:2000756"}


id: MONDO:0024561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vitelliform macular dystrophy in which the cause of the disease is a mutation in the PRPH2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult-onset foveomacular vitelliform dystrophy","termid":"MONDO:0011979"},{"relation_name":"is_a","term_name":"PRPH2-related retinopathy","termid":"MONDO:1040055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitelliform macular dystrophy 3","secondary_identifiers":["OMIM:608161"],"synonyms":[{"name":"PRPH2 vitelliform macular dystrophy","type":"exact"},{"name":"VMD3","type":"related"},{"name":"foveomacular dystrophy, adult-onset","type":"related"},{"name":"foveomacular dystrophy, adult-onset, with or without choroidal neovascularization","type":"related"},{"name":"macular dystrophy, vitelliform, 3","type":"related"},{"name":"vitelliform macular dystrophy caused by mutation in PRPH2","type":"exact"},{"name":"vitelliform macular dystrophy, adult-onset","type":"related"}],"termid":"MONDO:0024561","xrefs":{"Monarch":{"xref_id":"0024561"}}}


id: MONDO:0005687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by caliciviridae. They include hepatitis E; vesicular exanthema of swine; acute respiratory infections in felines, rabbit hemorrhagic disease, and some cases of gastroenteritis in humans.","definition_xrefs":["MESH:D017250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caliciviridae infectious disease","secondary_identifiers":["EFO:0007189"],"synonyms":[{"name":"Caliciviridae infection","type":"related"},{"name":"Calicivirus infection","type":"related"},{"name":"Calicivirus infections","type":"related"},{"name":"infection, Caliciviridae","type":"related"},{"name":"infection, Calicivirus","type":"related"},{"name":"infections, Caliciviridae","type":"related"},{"name":"infections, Calicivirus","type":"related"}],"termid":"MONDO:0005687","xrefs":{"Monarch":{"xref_id":"0005687"}}}


id: GO:1905221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of platelet formation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:10606160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell morphogenesis","termid":"GO:0010770"},{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"regulation of platelet formation","termid":"GO:1905219"},{"relation_name":"positively_regulates","term_name":"platelet formation","termid":"GO:0030220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet formation","synonyms":[{"name":"activation of platelet extrusion","type":"narrow"},{"name":"activation of platelet formation","type":"narrow"},{"name":"positive regulation of platelet extrusion","type":"exact"},{"name":"up regulation of platelet extrusion","type":"exact"},{"name":"up regulation of platelet formation","type":"exact"},{"name":"up-regulation of platelet extrusion","type":"exact"},{"name":"up-regulation of platelet formation","type":"exact"},{"name":"upregulation of platelet extrusion","type":"exact"},{"name":"upregulation of platelet formation","type":"exact"}],"termid":"GO:1905221"}


id: FYPO:0003575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0003223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K9 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"normal histone H3-K9 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"normal histone H3K9 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003575"}


id: GO:0005727
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Circular DNA structures that are not part of a chromosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"extrachromosomal DNA","termid":"GO:0046821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal circular DNA","termid":"GO:0005727"}


id: PBO:0043616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMMD5 pseudogene 1","termid":"PBO:0043616"}


id: PR:Q9P7A0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sgo1 gene.","definition_xrefs":["UniProtKB:Q9P7A0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shugoshin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.03c","synonyms":[{"name":"Spom972h-sgo1","type":"exact"}],"termid":"PR:Q9P7A0"}


id: PBO:0081168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFY antisense RNA 1","termid":"PBO:0081168"}


id: PBO:0113096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrosphingosine phosphate lyase; regulates intracellular levels of sphingolipid long-chain base phosphates (LCBPs), degrades phosphorylated long chain bases, prefers C16 dihydrosphingosine-l-phosphate as a substrate; localizes to the ER and to the peroxisome","termid":"PBO:0113096"}


id: GO:0046383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTDP-rhamnose, a substance composed of rhamnose in glycosidic linkage with deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dTDP-rhamnose metabolic process","synonyms":[{"name":"dTDP-rhamnose metabolism","type":"exact"}],"termid":"GO:0046383"}


id: GO:0097111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum (ER)-Golgi intermediate compartment.","definition_xrefs":["GOC:br","PMID:18287528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum-Golgi intermediate compartment organization","synonyms":[{"name":"ER-Golgi intermediate compartment organization","type":"exact"},{"name":"ERGIC organization","type":"exact"},{"name":"endoplasmic reticulum-Golgi intermediate compartment organisation","type":"exact"},{"name":"endoplasmic reticulum-Golgi intermediate compartment organization and biogenesis","type":"related"}],"termid":"GO:0097111"}


id: GO:0006476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deacetylation","synonyms":[{"name":"protein amino acid deacetylation","type":"exact"}],"termid":"GO:0006476"}


id: GO:0043272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethylene (C2-H4, ethene), occurring as part of the process of jasmonic acid and ethylene-dependent systemic resistance.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene biosynthetic process","termid":"GO:0009693"},{"relation_name":"part_of","term_name":"jasmonic acid and ethylene-dependent systemic resistance","termid":"GO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethylene biosynthesis involved in jasmonic acid and ethylene-dependent systemic resistance","synonyms":[{"name":"ethylene anabolism during jasmonic acid and ethylene-dependent systemic resistance","type":"related"},{"name":"ethylene biosynthetic process during jasmonic acid and ethylene-dependent systemic resistance","type":"related"},{"name":"ethylene formation during jasmonic acid and ethylene-dependent systemic resistance","type":"related"},{"name":"ethylene synthesis during jasmonic acid and ethylene-dependent systemic resistance","type":"related"}],"termid":"GO:0043272"}


id: MONDO:0006703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chronic interstitial cystitis (obsolete MONDO:0006703)","termid":"MONDO:0006703","xrefs":{"Monarch":{"xref_id":"0006703"}}}


id: GO:0062054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a fluoride ion through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:23991286","PMID:25156118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"},{"relation_name":"is_a","term_name":"fluoride transmembrane transporter activity","termid":"GO:1903425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"fluoride channel activity","termid":"GO:0062054"}


id: GO:0003859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-3-hydroxybutanoyl-CoA = (2E)-butenoyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.55","RHEA:17849"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxybutyryl-CoA dehydratase activity (obsolete GO:0003859)","synonyms":[{"name":"(3R)-3-hydroxybutanoyl-CoA hydro-lyase (crotonoyl-CoA-forming)","type":"related"},{"name":"(3R)-3-hydroxybutanoyl-CoA hydro-lyase activity","type":"related"},{"name":"3-hydroxybutyryl-CoA dehydratase activity","type":"broad"},{"name":"D-3-hydroxybutyryl coenzyme A dehydratase activity","type":"related"},{"name":"D-3-hydroxybutyryl-CoA dehydratase activity","type":"related"},{"name":"crotonase activity","type":"related"},{"name":"enoyl coenzyme A hydrase (D)","type":"broad"}],"termid":"GO:0003859"}


id: MONDO:1011244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal degeneration that occurs in crab-eating macaque.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal degeneration, crab-eating macaque","secondary_identifiers":["OMIA:000866-9541"],"termid":"MONDO:1011244","xrefs":{"Monarch":{"xref_id":"1011244"}}}


id: GO:0018723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-phenanthrol + X-SO3(-) = HX + 3-phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-phenanthrol sulfotransferase activity (obsolete GO:0018723)","synonyms":[{"name":"3-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018723"}


id: MONDO:0800025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disease characterized by hypertelorism with facial features that can closely resemble craniofrontonasal dysplasia, such as prominent forehead, widow's peak, heavy and broad eyebrows, long palpebral fissures, ptosis, high and broad nasal bridge, short nose, low-set ears, natal teeth, thin upper lip and a grooved chin, as well as limb (i.e. fifth-finger clinodactyly, pes adductus, mild interdigital webbing), urogenital (i.e. bilateral cryptorchidism and shawl scrotum in males) and umbilical (i.e. hernia/small omphalocele) anomalies and cardiac (i.e. ventricular or atrial septal defect, patent ductus arteriosus) defects. Additional findings such as polycystic kidneys and iridochorioretinal colobomas have also been reported and psychomotor development is normal. The facial features can also resemble Aarskog and Opitz G/BBB syndromes.","definition_xrefs":["Orphanet:1519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Teebi hypertelorism syndrome","termid":"MONDO:0030639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Teebi hypertelorism syndrome 1","secondary_identifiers":["GARD:957","SCTID:724284005","DOID:0080698","OMIM:145420"],"synonyms":[{"name":"Brachycephalofrontonasal dysplasia","type":"exact"},{"name":"Teebi hypertelorism syndrome","type":"broad"},{"name":"Teebi syndrome","type":"broad"},{"name":"craniofrontonasal dysplasia, Teebi type","type":"exact"},{"name":"hypertelorism, Teebi type","type":"broad"}],"termid":"MONDO:0800025","xrefs":{"Monarch":{"xref_id":"0800025"}}}


id: PBO:0077919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 10","termid":"PBO:0077919"}


id: GO:0010837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"keratinocyte proliferation","termid":"GO:0043616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of keratinocyte proliferation","termid":"GO:0010837"}


id: PBO:0004675
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.13","termid":"PBO:0004675"}


id: FYPO:0007885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of Lms2-8 complex binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:33378677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased Lsm2-8 complex binding","synonyms":[{"name":"reduced Lsm2-8 complex binding","type":"exact"}],"termid":"FYPO:0007885"}


id: PBO:0054715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2124","termid":"PBO:0054715"}


id: MONDO:0012556
data:
  {"annotated_genes":["SJAG_04231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85486],"is_not":false,"summary":null,"term":"MONDO:0012556"}]},"cv_name":"mondo","definition":"DK1-CDG is characterized by muscular hypotonia and ichthyosis. It has been described in four children from two consanguineous families. All the affected children died during early infancy, two from dilated cardiomyopathy. The syndrome is caused by a deficiency in dolichol kinase 1 (DK1), an enzyme involved in the de novo biosynthesis of dolichol phosphate. The mutations identified in the DK1 gene led to a 96 to 98% reduction in DK activity.","definition_xrefs":["Orphanet:91131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005066","MONDO:0024322","MONDO:0005093"],"is_obsolete":false,"name":"DK1-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1835849","DOID:0080565","MESH:C563666","GARD:12393","SCTID:718712005","MEDGEN:332072","OMIM:610768"],"synonyms":[{"name":"CDG Im","type":"related"},{"name":"CDG syndrome type Im","type":"exact"},{"name":"CDG-Im","type":"exact"},{"name":"CDG1M","type":"exact"},{"name":"CDGIm","type":"related"},{"name":"DK1-CDG","type":"exact"},{"name":"DK1-congenital disorder of glycosylation","type":"exact"},{"name":"DOLK-CDG (CDG-Im)","type":"related"},{"name":"Dk1 deficiency","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type Im","type":"exact"},{"name":"congenital disorder of glycosylation type 1m","type":"exact"},{"name":"congenital disorder of glycosylation type Im","type":"exact"},{"name":"congenital disorder of glycosylation, type Im","type":"related"},{"name":"dolichol kinase deficiency","type":"exact"},{"name":"hypotonia and ichthyosis due to dolichol phosphate deficiency","type":"exact"}],"termid":"MONDO:0012556","terms_by_termid":{"MONDO:0012556":null},"xrefs":{"Monarch":{"xref_id":"0012556"}}}


id: PBO:0002318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog (predicted)","termid":"PBO:0002318"}


id: FYPO:0000741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular pigment accumulation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular pigment accumulation phenotype","termid":"FYPO:0000739"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased cellular pigment accumulation","synonyms":[{"name":"abnormal cellular pigment accumulation","type":"exact"},{"name":"altered colony color","type":"related"},{"name":"altered colony colour","type":"related"},{"name":"increased cellular pigment accumulation during mitotic cell cycle","type":"related"},{"name":"increased cellular pigment accumulation during vegetative growth","type":"exact"}],"termid":"FYPO:0000741"}


id: FYPO:0006466
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature non-coding RNA (ncRNA) measured in a cell is lower than normal. Total ncRNA or a specific ncRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased mature ncRNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"decreased mature ncRNA accumulation","type":"related"},{"name":"decreased mature ncRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature ncRNA level during vegetative growth","type":"exact"},{"name":"decreased mature ncRNA transcript level","type":"exact"},{"name":"decreased mature non-coding RNA level","type":"exact"},{"name":"decreased ncRNA level","type":"broad"},{"name":"reduced mature ncRNA level","type":"exact"}],"termid":"FYPO:0006466","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: PBO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-terminal fragment of Rec8 generated by separase-mediated cleavage is an endogenous substrate of the N-end rule pathway","termid":"PBO:0015687"}


id: PBO:0005449
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Wall Protein","termid":"PBO:0005449"}


id: PBO:0113009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase involved in protein folding and NLS-directed nuclear transport; HSP70 family member; required for ubiquitin-dependent degradation of short-lived proteins; forms a chaperone complex with Ydj1p; localizes to the nucleus, cytoplasm and cell wall; unique functional specificity in the propagation of yeast [URE3] prions and vacuolar-mediated degradation of gluconeogenic enzymes; general targeting factor of Hsp104p to prion fibrils; 98% identity with paralog Ssa2p","termid":"PBO:0113009"}


id: GO:0048713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oligodendrocyte differentiation.","definition_xrefs":["PMID:15139015","GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"regulates","term_name":"oligodendrocyte differentiation","termid":"GO:0048709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oligodendrocyte differentiation","termid":"GO:0048713"}


id: PBO:0064121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 2 like 1, transient receptor potential cation channel","termid":"PBO:0064121"}


id: PBO:0053626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 670","termid":"PBO:0053626"}


id: PBO:0071172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 12","termid":"PBO:0071172"}


id: GO:0007292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction.","definition_xrefs":["GOC:dph","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female gamete generation","termid":"GO:0007292"}


id: GO:0008429
data:
  {"annotated_genes":["SJAG_02414"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70212],"is_not":false,"summary":null,"term":"GO:0008429"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatidylethanolamine, a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphatidylethanolamine binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0008429","terms_by_termid":{"GO:0008429":null}}


id: MONDO:0043543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any adverse condition in a patient occurring as the result of treatment by a physician, surgeon, or other health professional, especially infections acquired by a patient during the course of treatment.","definition_xrefs":["MESH:D007049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iatrogenic disease","secondary_identifiers":["MEDGEN:9393","UMLS:C0020732","SCTID:12456005","ICD10CM:T80-T88","ICD9:799.9"],"synonyms":[{"name":"condition, hospital-acquired","type":"related"},{"name":"conditions, hospital-acquired","type":"related"},{"name":"disease, iatrogenic","type":"related"},{"name":"diseases, iatrogenic","type":"related"},{"name":"hospital acquired condition","type":"related"},{"name":"hospital-acquired condition","type":"related"},{"name":"hospital-acquired conditions","type":"related"},{"name":"iatrogenic diseases","type":"related"},{"name":"iatrogenic disorder","type":"exact"}],"termid":"MONDO:0043543","xrefs":{"Monarch":{"xref_id":"0043543"}}}


id: GO:0031235
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a plasma membrane consisting of gene products and protein complexes that have some covalently attached part (e.g. peptide sequence or GPI anchor) which is embedded in the cytoplasmic side of the plasma membrane only.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of the cytoplasmic side of the plasma membrane (obsolete GO:0031235)","synonyms":[{"name":"intrinsic to cytoplasmic side of plasma membrane","type":"narrow"},{"name":"intrinsic to internal leaflet of plasma membrane","type":"exact"},{"name":"intrinsic to internal side of plasma membrane","type":"exact"}],"termid":"GO:0031235"}


id: PR:O74377
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sulfate anion transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03041","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate permease C3H7.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.02","secondary_identifiers":["UniProtKB:O74377"],"synonyms":[{"name":"Spom972h-SLC26A1","type":"exact"}],"termid":"PR:O74377"}


id: MOD:01695
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an 3-(carboxamidomethylthio)propanoyl group.","definition_xrefs":["PubMed:15121203","Unimod:293#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-(carboxamidomethylthio)propanoylated residue","termid":"MOD:00612"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino 3-(carboxamidomethylthio)propanoylated residue","synonyms":[{"name":"3-(carbamidomethylthio)propanoyl","type":"related"},{"name":"CAMthiopropanoyl","type":"related"}],"termid":"MOD:01695"}


id: GO:0150129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-33 production.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-33 production","termid":"GO:0150127"},{"relation_name":"positively_regulates","term_name":"interleukin-33 production","termid":"GO:0072639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-33 production","secondary_identifiers":["GO:0150125","GO:0150132"],"synonyms":[{"name":"positive regulation of interleukin-33 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-33 secretion","type":"narrow"}],"termid":"GO:0150129"}


id: FYPO:0002771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"abnormal protein localization to spindle pole body","termid":"FYPO:0002769"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0000138","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to meiotic spindle pole body","synonyms":[{"name":"abnormal protein localisation to meiotic spindle pole body","type":"exact"},{"name":"abnormal protein localization to meiotic SPB","type":"exact"}],"termid":"FYPO:0002771"}


id: PBO:0030033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-conjugation_without_glucose_starvation","termid":"PBO:0030033"}


id: GO:0052185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in an anatomical part or cellular component of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of structure of other organism involved in symbiotic interaction (obsolete GO:0052185)","synonyms":[{"name":"modification of structure of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052185"}


id: PBO:0063640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pepsinogen A3","termid":"PBO:0063640"}


id: PR:O42650
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase RIO1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10593:SF5","OMA:SCHPO00494","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase rio1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.10","secondary_identifiers":["UniProtKB:O42650"],"synonyms":[{"name":"Spom972h-RIOK1","type":"exact"}],"termid":"PR:O42650"}


id: MONDO:0013671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any complete hydatidiform mole in which the cause of the disease is a mutation in the KHDC3L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"complete hydatidiform mole","termid":"MONDO:0016785"},{"relation_name":"is_a","term_name":"gestational trophoblastic neoplasm","termid":"MONDO:0018944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydatidiform mole, recurrent, 2","secondary_identifiers":["OMIM:614293","MEDGEN:481982","UMLS:C3280352","GARD:18366"],"synonyms":[{"name":"HYDM2","type":"related"},{"name":"KHDC3L complete hydatidiform mole","type":"exact"},{"name":"complete hydatidiform mole caused by mutation in KHDC3L","type":"exact"},{"name":"hydatidiform MOLE, recurrent, 2","type":"related"},{"name":"hydatidiform Mole, complete","type":"related"},{"name":"hydatidiform Mole, recurrent, type 2","type":"exact"},{"name":"hydatidiform mole, recurrent, 2","type":"exact"}],"termid":"MONDO:0013671","xrefs":{"Monarch":{"xref_id":"0013671"}}}


id: PBO:0049308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase omega 3, pseudogene","termid":"PBO:0049308"}


id: GO:0035353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nicotinamide mononucleotide is transported across a membrane. Nicotinamide mononucleotide is a ribonucleotide in which the nitrogenous base, nicotinamide, is in beta-n-glycosidic linkage with the c-1 position of d-ribose. It is a constituent of NAD and NADP.","definition_xrefs":["GOC:bf","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinamide mononucleotide transport","termid":"GO:0015890"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"nicotinamide mononucleotide transmembrane transport","synonyms":[{"name":"nicotinamide mononucleotide membrane transport","type":"exact"}],"termid":"GO:0035353"}


id: MOD:01038
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because this represents a free amino acid and the corresponding residue is MOD:01026.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01038 norleucine (Nle) (obsolete MOD:01038)","termid":"MOD:01038"}


id: MOD:00220
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a 4-hydroxy-L-arginine.","definition_xrefs":["PubMed:7650037","PubMed:10966817","RESID:AA0215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated arginine","termid":"MOD:00682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-L-arginine","synonyms":[{"name":"(2S,4Xi)-2-amino-5-[(diaminomethylidene)amino]-4-hydroxypentanoic acid","type":"exact"},{"name":"2-amino-5-(carbamimidamido)-4-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-[(aminoiminomethyl)amino]-4-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-guanidino-4-hydroxypentanoic acid","type":"exact"},{"name":"4-hydroxy-L-arginine","type":"exact"},{"name":"4-hydroxylated L-arginine","type":"exact"},{"name":"4HyArg","type":"exact"},{"name":"C(gamma)-hydroxyarginine","type":"exact"},{"name":"MOD_RES 4-hydroxyarginine","type":"exact"},{"name":"gamma-hydroxyarginine","type":"exact"}],"termid":"MOD:00220"}


id: PBO:0079341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 25, pseudogene","termid":"PBO:0079341"}


id: PBO:0042407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC20 divergent transcript","termid":"PBO:0042407"}


id: PBO:0087137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that activates mRNA decapping directly; binds to mRNA substrate and enhances activity of decapping proteins Dcp1p and Dcp2p; has a role in translation during heat stress; protein becomes more abundant and forms cytoplasmic foci in response to DNA replication stress; EDC1 has a paralog, EDC2, that arose from the whole genome duplication","termid":"PBO:0087137"}


id: GO:0006785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heme B, a Fe(II) porphyrin complex readily isolated from the hemoglobin of beef blood, but also found in other proteins including other hemoglobins, myoglobins, cytochromes P-450, catalases, peroxidases as well as b type cytochromes.","definition_xrefs":["PMID:29414780","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme biosynthetic process","termid":"GO:0006783"},{"relation_name":"is_a","term_name":"heme B metabolic process","termid":"GO:0046492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme B biosynthetic process","synonyms":[{"name":"haem B biosynthesis","type":"exact"},{"name":"haem B biosynthetic process","type":"exact"},{"name":"heme B anabolism","type":"exact"},{"name":"heme B biosynthesis","type":"exact"},{"name":"heme B formation","type":"exact"},{"name":"heme B synthesis","type":"exact"},{"name":"protoheme biosynthesis","type":"exact"},{"name":"protoheme biosynthetic process","type":"exact"}],"termid":"GO:0006785"}


id: PBO:0004259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutL family protein Mlh1 (predicted)","termid":"PBO:0004259"}


id: FYPO:0007400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome does not occur during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during mitotic interphase","termid":"FYPO:0007174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to kinetochore during mitotic interphase","synonyms":[{"name":"abolished protein localisation to kinetochore during interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to kinetochore during interphase of mitotic cell cycle","type":"related"},{"name":"protein localization to kinetochore abolished during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0007400"}


id: MONDO:0957428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with t(17;19)","secondary_identifiers":["Orphanet:641375","UMLS:C5816789","MEDGEN:1843405"],"termid":"MONDO:0957428","xrefs":{"Monarch":{"xref_id":"0957428"}}}


id: PBO:0043080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 10 subunit","termid":"PBO:0043080"}


id: MONDO:0006137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic process in the cervix characterized by morphologic features of both moderate and severe intraepithelial neoplasia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"},{"relation_name":"is_a","term_name":"cervical intraepithelial neoplasia","termid":"MONDO:0022394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical intraepithelial neoplasia grade 2/3","secondary_identifiers":["EFO:1000166","NCIT:C94676","MEDGEN:458848","UMLS:C2986622"],"synonyms":[{"name":"CIN 2/3","type":"exact"}],"termid":"MONDO:0006137","xrefs":{"Monarch":{"xref_id":"0006137"}}}


id: PBO:0072816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 11","termid":"PBO:0072816"}


id: PBO:0054552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1953","termid":"PBO:0054552"}


id: GO:0070386
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A procollagen-proline 4-dioxygenase complex that contains alpha subunits of the type I isoform; its activity is readily inhibited by poly(L-proline).","definition_xrefs":["PMID:7753822","PMID:14500733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"procollagen-proline 4-dioxygenase complex","termid":"GO:0016222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"procollagen-proline 4-dioxygenase complex, alpha(I) type","synonyms":[{"name":"procollagen-proline, 2-oxoglutarate-4-dioxygenase complex, alpha(I) type","type":"exact"},{"name":"prolyl 4-hydroxylase complex (alpha(I)-type)","type":"broad"}],"termid":"GO:0070386"}


id: FYPO:0007624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial cytochrome c oxidase (respiratory chain complex IV) assembly is decreased.","definition_xrefs":["GO:0033617","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitochondrial respiratory chain complex assembly","termid":"FYPO:0007122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitochondrial respiratory chain complex IV assembly","synonyms":[{"name":"decreased mitochondrial cytochrome c oxidase assembly","type":"exact"},{"name":"decreased mitochondrial respiratory chain complex IV assembly during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial respiratory chain complex IV assembly during vegetative growth","type":"exact"},{"name":"decreased respiratory chain complex IV assembly","type":"exact"}],"termid":"FYPO:0007624"}


id: PBO:0091525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation and termination factor eIF5A","termid":"PBO:0091525"}


id: GO:0045852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pH","termid":"GO:0006885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pH elevation","termid":"GO:0045852"}


id: MONDO:0060690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenytoin toxicity","secondary_identifiers":["MEDGEN:101775","OMIM:617955","UMLS:C0149969"],"synonyms":[{"name":"arene oxide detoxification defect","type":"related"},{"name":"diphenylhydantoin, defect in hydroxylation of","type":"related"},{"name":"fetal hydantoin syndrome","type":"related"},{"name":"foetal hydantoin syndrome","type":"related"},{"name":"phenytoin toxicity","type":"exact"}],"termid":"MONDO:0060690","xrefs":{"Monarch":{"xref_id":"0060690"}}}


id: PBO:0061710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 5","termid":"PBO:0061710"}


id: PBO:0059680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 46","termid":"PBO:0059680"}


id: RO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which the partners are related via a feeding relationship.","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophically_interacts_with","termid":"RO:0002438"}


id: MONDO:0015720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Moderately severe hemophilia A is a form of hemophilia A characterized by factor VIII deficiency leading to abnormal bleeding as a result of minor injuries, or following surgery or tooth extraction.","definition_xrefs":["Orphanet:169805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A","termid":"MONDO:0010602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"moderately severe hemophilia A","secondary_identifiers":["MEDGEN:543974","UMLS:C0272323","GARD:17060"],"synonyms":[{"name":"moderately severe factor VIII deficiency","type":"exact"},{"name":"moderately severe haemophilia type A","type":"exact"},{"name":"moderately severe hemophilia type A","type":"exact"}],"termid":"MONDO:0015720","xrefs":{"Monarch":{"xref_id":"0015720"}}}


id: SO:0001749
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL4 RNA leader sequence to the 5' end of an mRNA. SL4 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL4_acceptor_site","synonyms":[{"name":"SL4 acceptor site","type":"exact"}],"termid":"SO:0001749"}


id: MONDO:0001733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"retinal vein occlusion","termid":"MONDO:0006951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"occlusion of tributary of retinal vein","secondary_identifiers":["ICD9:362.36","DOID:13514"],"synonyms":[{"name":"venous tributary (branch) occlusion of retina","type":"exact"},{"name":"venous tributary branch occlusion of retina","type":"exact"},{"name":"venous tributary occlusion of retina","type":"exact"}],"termid":"MONDO:0001733","xrefs":{"Monarch":{"xref_id":"0001733"}}}


id: PBO:0079923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"URB1 ribosome biogenesis homolog","termid":"PBO:0079923"}


id: MONDO:0025353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 90","secondary_identifiers":["DOID:0070381","GARD:15286","OMIM:301058","UMLS:C5542345","MEDGEN:1786502"],"synonyms":[{"name":"DEE90","type":"exact"},{"name":"developmental and epileptic encephalopathy 90","type":"exact"},{"name":"developmental and epileptic encephalopathy 90, X-linked recessive, X-linked dominant","type":"exact"}],"termid":"MONDO:0025353","xrefs":{"Monarch":{"xref_id":"0025353"}}}


id: PBO:0090901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Ale1","termid":"PBO:0090901"}


id: PBO:0039096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase like 2","termid":"PBO:0039096"}


id: PBO:0030858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_calcium_level_during_cellular_response_to_salt_stress","termid":"PBO:0030858"}


id: MONDO:0002530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant spindle cell melanoma (obsolete MONDO:0002530)","termid":"MONDO:0002530","xrefs":{"Monarch":{"xref_id":"0002530"}}}


id: PBO:0112868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase Fcy1","termid":"PBO:0112868"}


id: MONDO:0006713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"New blood vessels originating from the corneal veins and extending from the limbus into the adjacent corneal stroma. Neovascularization in the superficial and/or deep corneal stroma is a sequel to numerous inflammatory diseases of the ocular anterior segment, such as trachoma, viral interstitial keratitis, microbial keratoconjunctivitis, and the immune response elicited by corneal transplantation.","definition_xrefs":["MESH:D016510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis","termid":"MONDO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal neovascularization","secondary_identifiers":["EFO:1000880","ICD9:370.60","DOID:11382","ICD9:370.6","UMLS:C0085109","icd11.foundation:2077068570","MedDRA:10011031","MEDGEN:43103","SCTID:19161004"],"termid":"MONDO:0006713","xrefs":{"Monarch":{"xref_id":"0006713"}}}


id: GO:1990478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultrasonic stimulus.","definition_xrefs":["PMID:20950932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ultrasound","termid":"GO:1990478"}


id: PBO:0066739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 36","termid":"PBO:0066739"}


id: PBO:0081908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 875","termid":"PBO:0081908"}


id: PR:P78898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16A3.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase C16A3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.12c","synonyms":[{"name":"Spom972h-SPBC16A3.12c","type":"exact"}],"termid":"PR:P78898"}


id: PBO:0067535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 679, pseudogene","termid":"PBO:0067535"}


id: FYPO:0000477
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or both meiotic nuclear division(s) begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of meiosis","synonyms":[{"name":"delayed meiosis","type":"exact"},{"name":"delayed onset of meiotic nuclear division","type":"exact"},{"name":"meiosis: delayed","type":"related"}],"termid":"FYPO:0000477"}


id: PBO:0090050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Sec11","termid":"PBO:0090050"}


id: PR:P20772
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trifunctional purine biosynthetic protein adenosine-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional purine biosynthetic protein ADE1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.01","secondary_identifiers":["UniProtKB:P20772"],"synonyms":[{"name":"Spom972h-GART","type":"exact"}],"termid":"PR:P20772"}


id: PBO:0049681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HuR (ELAVL1) associated fibroblast migratory lncRNA","termid":"PBO:0049681"}


id: PBO:0018273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex SMC subunit Smc2","termid":"PBO:0018273"}


id: MONDO:0010020
data:
  {"annotated_genes":["SJAG_01537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84894],"is_not":false,"summary":null,"term":"MONDO:0010020"}]},"cv_name":"mondo","definition":"Any congenital generalized lipodystrophy in which the cause of the disease is a mutation in the BSCL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital generalized lipodystrophy","termid":"MONDO:0006536"},{"relation_name":"is_a","term_name":"Berardinelli-Seip congenital lipodystrophy","termid":"MONDO:0018883"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"congenital generalized lipodystrophy type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:269700","UMLS:C1720863","GARD:10212","DOID:0111136","MEDGEN:318593"],"synonyms":[{"name":"BSCL2 congenital generalised lipodystrophy (disease)","type":"exact"},{"name":"BSCL2 congenital generalized lipodystrophy (disease)","type":"exact"},{"name":"BSCL2-related Brunzell syndrome","type":"related"},{"name":"Berardinelli Seip congenital lipodystrophy type 2","type":"related"},{"name":"Berardinelli syndrome","type":"related"},{"name":"Berardinelli-Seip congenital lipodystrophy type 2","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy, type 2","type":"related"},{"name":"Berardinelli-Seip syndrome","type":"exact"},{"name":"Brunzell syndrome BSCL2-related","type":"exact"},{"name":"Brunzell syndrome, BSCL2-related","type":"related"},{"name":"CGL2","type":"exact"},{"name":"Seip syndrome","type":"related"},{"name":"congenital generalised lipodystrophy (disease) caused by mutation in BSCL2","type":"exact"},{"name":"congenital generalized lipodystrophy (disease) caused by mutation in BSCL2","type":"exact"},{"name":"congenital lipoatrophic diabetes","type":"exact"},{"name":"lipoatrophic diabetes, congenital","type":"related"},{"name":"lipodystrophy, Berardinelli-Seip congenital, type 2","type":"related"},{"name":"lipodystrophy, congenital generalized, type 2","type":"related"},{"name":"lipodystrophy, total, and acromegaloid gigantism","type":"related"},{"name":"total lipodystrophy and acromegaloid gigantism","type":"exact"}],"termid":"MONDO:0010020","terms_by_termid":{"MONDO:0010020":null},"xrefs":{"Monarch":{"xref_id":"0010020"}}}


id: PBO:0042966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 4","termid":"PBO:0042966"}


id: MONDO:0008452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy, facioscapulohumeral type","secondary_identifiers":["MESH:C566674","OMIM:182970","UMLS:C1866783","MEDGEN:357136"],"synonyms":[{"name":"Fshsma","type":"related"},{"name":"spinal muscular atrophy, facioscapulohumeral type","type":"exact"}],"termid":"MONDO:0008452","xrefs":{"Monarch":{"xref_id":"0008452"}}}


id: MONDO:0009211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor VII (FVII) deficiency is a rare hereditary hemorrhagic disease caused by the diminution or absence of this coagulation factor.","definition_xrefs":["Orphanet:327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor VII deficiency","termid":"MONDO:0002244"},{"relation_name":"is_a","term_name":"congenital vitamin K-dependent coagulation factors deficiency","termid":"MONDO:0015722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital factor VII deficiency","secondary_identifiers":["UMLS:C0272320","NCIT:C131631","DOID:2215","GARD:2238","MedDRA:10016079","MEDGEN:473015","OMIM:227500"],"synonyms":[{"name":"F7 deficiency","type":"related"},{"name":"congenital factor VII deficiency","type":"exact"},{"name":"congenital proconvertin deficiency","type":"exact"},{"name":"factor 7 deficiency","type":"related"},{"name":"factor VII deficiency","type":"related"},{"name":"hypoproconvertinemia","type":"exact"}],"termid":"MONDO:0009211","xrefs":{"Monarch":{"xref_id":"0009211"}}}


id: PBO:0111817
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT1 subfamily","termid":"PBO:0111817"}


id: GO:0010670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of oxygen and reactive oxygen species metabolic process (obsolete GO:0010670)","synonyms":[{"name":"positive regulation of oxygen and reactive oxygen species metabolic process","type":"exact"}],"termid":"GO:0010670"}


id: MONDO:0004373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary meningioma occurring in adults.","definition_xrefs":["NCIT:C8293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdoid meningioma","termid":"MONDO:0003262"},{"relation_name":"is_a","term_name":"papillary meningioma","termid":"MONDO:0021088"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult papillary meningioma","secondary_identifiers":["DOID:7826","MEDGEN:76256","UMLS:C0281334"],"synonyms":[{"name":"adult papillary meningioma","type":"exact"},{"name":"papillary meningioma","type":"broad"},{"name":"papillary meningioma of adults","type":"exact"}],"termid":"MONDO:0004373","xrefs":{"Monarch":{"xref_id":"0004373"}}}


id: GO:0030079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Bacteriochlorophyll a binding complex that is peripherally associated to the bacterial reaction center.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane light-harvesting complex","termid":"GO:0030077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"light-harvesting complex, peripheral complex","termid":"GO:0030079"}


id: MONDO:0005144
data:
  {"annotated_genes":["SJAG_03170","SJAG_02289","SJAG_02242","SJAG_03923","SJAG_03345","SJAG_04489","SJAG_04387","SJAG_07000","SJAG_02695","SJAG_02509","SJAG_01317","SJAG_00053","SJAG_04178","SJAG_03598","SJAG_00668"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859529"},{"annotations":[87073,85043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007103"},{"annotations":[86575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012945"},{"annotations":[86686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010459"},{"annotations":[85450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013715"},{"annotations":[85196,85197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014531"},{"annotations":[86310,86311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011223"},{"annotations":[86437,86438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012077"},{"annotations":[86542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[85124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[87063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"}]},"cv_name":"mondo","definition":"An instance of amyotrophic lateral sclerosis that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyotrophic lateral sclerosis","termid":"MONDO:0004976"},{"relation_name":"is_a","term_name":"hereditary motor neuron disease","termid":"MONDO:0024257"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00668":null,"SJAG_01317":null,"SJAG_02242":null,"SJAG_02289":null,"SJAG_02509":null,"SJAG_02695":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03598":null,"SJAG_03923":null,"SJAG_04178":null,"SJAG_04387":null,"SJAG_04489":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"familial amyotrophic lateral sclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1642547","OMIMPS:105400","EFO:0001356","UMLS:C4551993"],"synonyms":[{"name":"hereditary amyotrophic lateral sclerosis","type":"exact"}],"termid":"MONDO:0005144","terms_by_termid":{"MONDO:0007103":null,"MONDO:0008458":null,"MONDO:0010459":null,"MONDO:0010936":null,"MONDO:0011223":null,"MONDO:0012077":null,"MONDO:0012945":null,"MONDO:0013501":null,"MONDO:0013715":null,"MONDO:0014531":null,"MONDO:0859529":null},"xrefs":{"Monarch":{"xref_id":"0005144"}}}


id: PBO:0048952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 3","termid":"PBO:0048952"}


id: FYPO:0007679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the RTS1 barrier (normally located in the mating-type region) occurs to a greater extent than normal.","definition_xrefs":["PMID:33568651","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"increased replication fork arrest at RTS1 barrier","termid":"FYPO:0007679"}


id: MONDO:0001755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vaginal carcinosarcoma (obsolete MONDO:0001755)","termid":"MONDO:0001755","xrefs":{"Monarch":{"xref_id":"0001755"}}}


id: GO:0097334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a perphenazine stimulus. Perphenazine is a phenothiazine derivative having a chloro substituent at the 2-position and a 3-[4-(2-hydroxyethyl)piperazin-1-yl]propyl group at the N-10 position.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to perphenazine","termid":"GO:0097334"}


id: PBO:0050972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 15","termid":"PBO:0050972"}


id: PBO:0028762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytoplasmic_translational_initiation","termid":"PBO:0028762"}


id: PBO:0078464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-2","termid":"PBO:0078464"}


id: PBO:0080378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS9D1 antisense RNA 1","termid":"PBO:0080378"}


id: PBO:0054262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1647","termid":"PBO:0054262"}


id: PBO:0044665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicarbonyl and L-xylulose reductase","termid":"PBO:0044665"}


id: MONDO:0008940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endosteal sclerosis-cerebellar hypoplasia syndrome (obsolete MONDO:0008940)","termid":"MONDO:0008940","xrefs":{"Monarch":{"xref_id":"0008940"}}}


id: PBO:0083547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YBL095W","termid":"PBO:0083547"}


id: MONDO:0011099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Human HOXA1 syndromes is characterized by deafness, central hypoventilation, congenital ocular paralysis and developmental retardation. Cardiac anomalies and paralysis of the vocal chords may also be present. Six cases have been reported so far. Transmission is thought to be autosomal recessive.","definition_xrefs":["Orphanet:69739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"human HOXA1 syndromes","secondary_identifiers":["GARD:8333","DOID:0050682","OMIM:601536","MEDGEN:330410","SCTID:720518006","UMLS:C1832215"],"synonyms":[{"name":"ABDS","type":"related"},{"name":"ABSD","type":"exact"},{"name":"Athabascan brainstem dysgenesis syndrome","type":"exact"},{"name":"Athabaskan brainstem dysgenesis","type":"related"},{"name":"Athabaskan brainstem dysgenesis syndrome","type":"exact"},{"name":"BSAS","type":"related"},{"name":"Bosley Salih Alorainy syndrome","type":"related"},{"name":"Bosley-Salih-Alorainy syndrome","type":"related"},{"name":"Human HOXA1 syndromes","type":"related"},{"name":"Navajo brainstem syndrome","type":"exact"}],"termid":"MONDO:0011099","xrefs":{"Monarch":{"xref_id":"0011099"}}}


id: PBO:0012837
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature peptide sequence is YTPKVPYM","termid":"PBO:0012837"}


id: MONDO:0009916
data:
  {"annotated_genes":["SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86736],"is_not":false,"summary":null,"term":"MONDO:0009916"}]},"cv_name":"mondo","definition":"Decreased activity of the steroidogenic enzyme, 17-beta-hydroxysteroid dehydrogenase, associated with mutation(s) in the HSD17B3 gene, leading to reduced testosterone production.","definition_xrefs":["NCIT:C120203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00630":null},"genotype_count":0,"is_obsolete":false,"name":"46,XY disorder of sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:887793448","OMIM:264300","MESH:C564868","NANDO:2200390","UMLS:C0268296","Orphanet:752","DOID:0112248","SCTID:50658006","MESH:C537805","MEDGEN:120626","GARD:5659"],"synonyms":[{"name":"17 Beta HSD3 deficiency","type":"exact"},{"name":"17 alpha KSR deficiency","type":"related"},{"name":"17 alpha ketosteroid reductase deficiency of testis","type":"related"},{"name":"17 beta HSD3 deficiency","type":"exact"},{"name":"17 beta hydroxysteroid dehydrogenase III deficiency","type":"related"},{"name":"17-BETA hydroxysteroid dehydrogenase III deficiency","type":"related"},{"name":"17-Beta hydroxysteroid dehydrogenase 3 deficiency","type":"related"},{"name":"17-KSR deficiency","type":"related"},{"name":"17-beta hydroxysteroid dehydrogenase 3 deficiency","type":"related"},{"name":"17-beta-hydroxysteroid dehydrogenase 3 deficiency","type":"exact"},{"name":"17-ketoreductase deficiency","type":"exact"},{"name":"17-ketosteroid reductase deficiency of testis","type":"related"},{"name":"17-ketosteroidreductase deficiency","type":"exact"},{"name":"46,XY disorder of sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency","type":"exact"},{"name":"Male pseudoherma-phroditism with gynecomastia","type":"related"},{"name":"Male pseudohermaphroditism due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency","type":"exact"},{"name":"neutral 17 beta hydroxysteroid oxidoreductase deficiency","type":"related"},{"name":"neutral 17-Beta-hydroxysteroid oxidoreductase deficiency","type":"related"},{"name":"polycystic ovarian disease due to 17-ketosteroid reductase deficiency","type":"related"},{"name":"polycystic ovary syndrome due to 17-ketosteroid reductase deficiency","type":"related"},{"name":"pseudohermaphroditism, Male, with gynecomastia","type":"related"}],"termid":"MONDO:0009916","terms_by_termid":{"MONDO:0009916":null},"xrefs":{"Monarch":{"xref_id":"0009916"}}}


id: GO:0150105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained, in a location within a cell-cell junction.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:26706435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell junction","termid":"GO:1902414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell-cell junction","termid":"GO:0150105"}


id: MONDO:0007773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperproglucagonemia","secondary_identifiers":["MESH:C564159","MEDGEN:326726","UMLS:C1840388","OMIM:145270"],"synonyms":[{"name":"glucagon, large molecular weight species of","type":"related"},{"name":"hyperproglucagonemia","type":"exact"}],"termid":"MONDO:0007773","xrefs":{"Monarch":{"xref_id":"0007773"}}}


id: PBO:0063731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHACTR3 antisense RNA 1","termid":"PBO:0063731"}


id: MONDO:0016387
data:
  {"annotated_genes":["SJAG_04568","SJAG_00404","SJAG_01303","SJAG_04738","SJAG_04885","SJAG_06603","SJAG_01865","SJAG_01413","SJAG_04367","SJAG_01575","SJAG_04094","SJAG_02848","SJAG_02615","SJAG_04378","SJAG_03813","SJAG_00186","SJAG_01797","SJAG_MIT04","SJAG_00721","SJAG_00933","SJAG_00797","SJAG_03585","SJAG_02229","SJAG_03992","SJAG_01043","SJAG_02324","SJAG_00513","SJAG_02656","SJAG_02452","SJAG_01640","SJAG_MIT13","SJAG_02428","SJAG_02353","SJAG_04317","SJAG_01649","SJAG_00522","SJAG_00088","SJAG_05218","SJAG_02201","SJAG_02564","SJAG_02050","SJAG_00653","SJAG_04019","SJAG_02641","SJAG_06022","SJAG_00358","SJAG_04285","SJAG_04183","SJAG_02658","SJAG_02977","SJAG_00255","SJAG_04588","SJAG_02721","SJAG_03563","SJAG_00459","SJAG_05560","SJAG_00885","SJAG_03461","SJAG_MIT15","SJAG_MIT03","SJAG_00103","SJAG_00894","SJAG_03104","SJAG_00997","SJAG_03155","SJAG_00308","SJAG_04553","SJAG_05199","SJAG_01368","SJAG_04397","SJAG_01577","SJAG_01647","SJAG_00133","SJAG_03071","SJAG_01174","SJAG_01190","SJAG_03773","SJAG_01524","SJAG_04000","SJAG_00319","SJAG_01004","SJAG_04856","SJAG_02302","SJAG_02548","SJAG_02384","SJAG_04862","SJAG_01503","SJAG_00634","SJAG_01890","SJAG_03014","SJAG_04473","SJAG_01077","SJAG_02016","SJAG_03584","SJAG_05271","SJAG_03046","SJAG_01589","SJAG_01866","SJAG_01179","SJAG_03332","SJAG_16456","SJAG_07003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013111"},{"annotations":[85568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008134"},{"annotations":[86107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012784"},{"annotations":[85156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011451"},{"annotations":[84911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014051"},{"annotations":[84890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014667"},{"annotations":[84888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014668"},{"annotations":[86660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014455"},{"annotations":[86675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014467"},{"annotations":[85740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014733"},{"annotations":[86249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011829"},{"annotations":[86099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013838"},{"annotations":[85670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033615"},{"annotations":[86992,86993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013969"},{"annotations":[86832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013986"},{"annotations":[86831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013987"},{"annotations":[85726,85727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014190"},{"annotations":[85781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012510"},{"annotations":[86073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014397"},{"annotations":[86074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014398"},{"annotations":[86528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014525"},{"annotations":[85216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014547"},{"annotations":[85039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014636"},{"annotations":[84900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014684"},{"annotations":[85660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012534"},{"annotations":[87038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013306"},{"annotations":[85768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013570"},{"annotations":[86259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013811"},{"annotations":[85455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014269"},{"annotations":[86679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020727"},{"annotations":[85736,85735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014775"},{"annotations":[85020,85019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054677"},{"annotations":[84902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054741"},{"annotations":[84901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054742"},{"annotations":[85799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054781"},{"annotations":[85913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032712"},{"annotations":[85935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032726"},{"annotations":[85309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030006"},{"annotations":[85310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030007"},{"annotations":[85314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030008"},{"annotations":[85321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030017"},{"annotations":[85166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033533"},{"annotations":[85168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033534"},{"annotations":[85167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033537"},{"annotations":[86364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030311"},{"annotations":[86906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859228"},{"annotations":[85514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859323"},{"annotations":[85398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859337"},{"annotations":[85860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957992"},{"annotations":[85334,85335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013116"},{"annotations":[87059,84829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010799"},{"annotations":[86098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013837"},{"annotations":[85327,85328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013726"},{"annotations":[86096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013840"},{"annotations":[86095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[85772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012512"},{"annotations":[85634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014261"},{"annotations":[85240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012191"},{"annotations":[85082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014020"},{"annotations":[85918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014882"},{"annotations":[85886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014869"},{"annotations":[86709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013458"},{"annotations":[85760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014162"},{"annotations":[85348,85346,85347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010788"},{"annotations":[86786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014976"},{"annotations":[86715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012622"},{"annotations":[86998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013971"},{"annotations":[86668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032869"},{"annotations":[84909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014091"},{"annotations":[85295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011421"},{"annotations":[86349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957254"},{"annotations":[86348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957255"},{"annotations":[84930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[85159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011283"},{"annotations":[86986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014959"},{"annotations":[85714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014175"},{"annotations":[85629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014820"},{"annotations":[86973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014943"},{"annotations":[86792,86791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032815"},{"annotations":[85298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032932"},{"annotations":[86848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008758"},{"annotations":[86850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013350"},{"annotations":[85438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009747"},{"annotations":[86120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012792"},{"annotations":[87016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009504"},{"annotations":[86119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012791"},{"annotations":[85945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013865"},{"annotations":[85738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010779"},{"annotations":[86689,86690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024553"},{"annotations":[87041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013307"},{"annotations":[84819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010794"},{"annotations":[85234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014562"},{"annotations":[85265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008133"},{"annotations":[85249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"},{"annotations":[86997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[85807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[85114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012683"},{"annotations":[85698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014754"},{"annotations":[84925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[85487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008922"},{"annotations":[86231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011835"},{"annotations":[86708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010437"},{"annotations":[85290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012664"},{"annotations":[86856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013354"},{"annotations":[86466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013776"},{"annotations":[84984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"}]},"cv_name":"mondo","definition":"A multisystem disorder with variable manifestations resulting from a defect in the mitochondrial oxidative phosphorylation (OXPHOS) system.","definition_xrefs":["OMIM:609060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"}],"gene_count":102,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00103":null,"SJAG_00133":null,"SJAG_00186":null,"SJAG_00255":null,"SJAG_00308":null,"SJAG_00319":null,"SJAG_00358":null,"SJAG_00404":null,"SJAG_00459":null,"SJAG_00513":null,"SJAG_00522":null,"SJAG_00634":null,"SJAG_00653":null,"SJAG_00721":null,"SJAG_00797":null,"SJAG_00885":null,"SJAG_00894":null,"SJAG_00933":null,"SJAG_00997":null,"SJAG_01004":null,"SJAG_01043":null,"SJAG_01077":null,"SJAG_01174":null,"SJAG_01179":null,"SJAG_01190":null,"SJAG_01303":null,"SJAG_01368":null,"SJAG_01413":null,"SJAG_01503":null,"SJAG_01524":null,"SJAG_01575":null,"SJAG_01577":null,"SJAG_01589":null,"SJAG_01640":null,"SJAG_01647":null,"SJAG_01649":null,"SJAG_01797":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_01890":null,"SJAG_02016":null,"SJAG_02050":null,"SJAG_02201":null,"SJAG_02229":null,"SJAG_02302":null,"SJAG_02324":null,"SJAG_02353":null,"SJAG_02384":null,"SJAG_02428":null,"SJAG_02452":null,"SJAG_02548":null,"SJAG_02564":null,"SJAG_02615":null,"SJAG_02641":null,"SJAG_02656":null,"SJAG_02658":null,"SJAG_02721":null,"SJAG_02848":null,"SJAG_02977":null,"SJAG_03014":null,"SJAG_03046":null,"SJAG_03071":null,"SJAG_03104":null,"SJAG_03155":null,"SJAG_03332":null,"SJAG_03461":null,"SJAG_03563":null,"SJAG_03584":null,"SJAG_03585":null,"SJAG_03773":null,"SJAG_03813":null,"SJAG_03992":null,"SJAG_04000":null,"SJAG_04019":null,"SJAG_04094":null,"SJAG_04183":null,"SJAG_04285":null,"SJAG_04317":null,"SJAG_04367":null,"SJAG_04378":null,"SJAG_04397":null,"SJAG_04473":null,"SJAG_04553":null,"SJAG_04568":null,"SJAG_04588":null,"SJAG_04738":null,"SJAG_04856":null,"SJAG_04862":null,"SJAG_04885":null,"SJAG_05199":null,"SJAG_05218":null,"SJAG_05271":null,"SJAG_05560":null,"SJAG_06022":null,"SJAG_06603":null,"SJAG_07003":null,"SJAG_16456":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial oxidative phosphorylation disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:223713","UMLS:C5679825","GARD:20546","icd11.foundation:1204111545","MEDGEN:1825947"],"synonyms":[{"name":"OXPHOS disease","type":"exact"},{"name":"OXPHOS system deficiency","type":"exact"}],"termid":"MONDO:0016387","terms_by_termid":{"MONDO:0008133":null,"MONDO:0008134":null,"MONDO:0008758":null,"MONDO:0008922":null,"MONDO:0009504":null,"MONDO:0009747":null,"MONDO:0010437":null,"MONDO:0010779":null,"MONDO:0010788":null,"MONDO:0010794":null,"MONDO:0010799":null,"MONDO:0011283":null,"MONDO:0011421":null,"MONDO:0011451":null,"MONDO:0011829":null,"MONDO:0011835":null,"MONDO:0012191":null,"MONDO:0012450":null,"MONDO:0012510":null,"MONDO:0012512":null,"MONDO:0012534":null,"MONDO:0012622":null,"MONDO:0012664":null,"MONDO:0012683":null,"MONDO:0012784":null,"MONDO:0012791":null,"MONDO:0012792":null,"MONDO:0012992":null,"MONDO:0013111":null,"MONDO:0013116":null,"MONDO:0013306":null,"MONDO:0013307":null,"MONDO:0013350":null,"MONDO:0013354":null,"MONDO:0013458":null,"MONDO:0013570":null,"MONDO:0013726":null,"MONDO:0013776":null,"MONDO:0013811":null,"MONDO:0013836":null,"MONDO:0013837":null,"MONDO:0013838":null,"MONDO:0013840":null,"MONDO:0013865":null,"MONDO:0013969":null,"MONDO:0013971":null,"MONDO:0013972":null,"MONDO:0013986":null,"MONDO:0013987":null,"MONDO:0014020":null,"MONDO:0014051":null,"MONDO:0014062":null,"MONDO:0014091":null,"MONDO:0014126":null,"MONDO:0014162":null,"MONDO:0014175":null,"MONDO:0014190":null,"MONDO:0014261":null,"MONDO:0014269":null,"MONDO:0014397":null,"MONDO:0014398":null,"MONDO:0014455":null,"MONDO:0014467":null,"MONDO:0014525":null,"MONDO:0014547":null,"MONDO:0014562":null,"MONDO:0014636":null,"MONDO:0014656":null,"MONDO:0014667":null,"MONDO:0014668":null,"MONDO:0014684":null,"MONDO:0014733":null,"MONDO:0014754":null,"MONDO:0014775":null,"MONDO:0014820":null,"MONDO:0014869":null,"MONDO:0014882":null,"MONDO:0014943":null,"MONDO:0014959":null,"MONDO:0014976":null,"MONDO:0020727":null,"MONDO:0024553":null,"MONDO:0030006":null,"MONDO:0030007":null,"MONDO:0030008":null,"MONDO:0030017":null,"MONDO:0030311":null,"MONDO:0032712":null,"MONDO:0032726":null,"MONDO:0032815":null,"MONDO:0032869":null,"MONDO:0032932":null,"MONDO:0033533":null,"MONDO:0033534":null,"MONDO:0033537":null,"MONDO:0033615":null,"MONDO:0054677":null,"MONDO:0054741":null,"MONDO:0054742":null,"MONDO:0054781":null,"MONDO:0859228":null,"MONDO:0859323":null,"MONDO:0859337":null,"MONDO:0957254":null,"MONDO:0957255":null,"MONDO:0957992":null},"xrefs":{"Monarch":{"xref_id":"0016387"}}}


id: PBO:0073801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 7","termid":"PBO:0073801"}


id: PBO:0071299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 22","termid":"PBO:0071299"}


id: PBO:0057439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 556","termid":"PBO:0057439"}


id: PBO:0054490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1890","termid":"PBO:0054490"}


id: PBO:0081110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAND2A pseudogene 1","termid":"PBO:0081110"}


id: MONDO:0013520
data:
  {"annotated_genes":["SJAG_04266"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85271],"is_not":false,"summary":null,"term":"MONDO:0013520"}]},"cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal recessive mutation of WRAP53 on chromosome 17p13.1.","definition_xrefs":["DOID:0070019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal recessive 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613988","MEDGEN:462792","UMLS:C3151442","NCIT:C176927","GARD:15740"],"synonyms":[{"name":"DKCB3","type":"exact"},{"name":"autosomal recessive dyskeratosis congenita 3","type":"related"},{"name":"dyskeratosis congenita, autosomal recessive 3","type":"exact"},{"name":"dyskeratosis congenita, autosomal recessive type 3","type":"exact"}],"termid":"MONDO:0013520","terms_by_termid":{"MONDO:0013520":null},"xrefs":{"Monarch":{"xref_id":"0013520"}}}


id: GO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a microglial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microglial cell activation","termid":"GO:0001774"},{"relation_name":"is_a","term_name":"macrophage activation involved in immune response","termid":"GO:0002281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell activation involved in immune response","synonyms":[{"name":"microglial cell activation during immune response","type":"related"}],"termid":"GO:0002282"}


id: GO:0045296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cadherin, a type I membrane protein involved in cell adhesion.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion molecule binding","termid":"GO:0050839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"cadherin binding","termid":"GO:0045296"}


id: SO:1000064
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An umbrella term for terms describing an effect of a sequence variation on the frame of translation.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000064 sequence_variation_affecting_reading_frame (obsolete SO:1000064)","synonyms":[{"name":"mutation affecting reading frame","type":"exact"},{"name":"sequence variation affecting reading frame","type":"related"}],"termid":"SO:1000064"}


id: GO:1901762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of oxytetracycline.","definition_xrefs":["PMID:8163168","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"oxytetracycline metabolic process","termid":"GO:1901761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"oxytetracycline catabolic process","synonyms":[{"name":"oxytetracycline breakdown","type":"exact"},{"name":"oxytetracycline catabolism","type":"exact"},{"name":"oxytetracycline degradation","type":"exact"}],"termid":"GO:1901762"}


id: GO:1900624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte aggregation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monocyte aggregation","termid":"GO:1900623"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"negatively_regulates","term_name":"monocyte aggregation","termid":"GO:0070487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of monocyte aggregation","synonyms":[{"name":"down regulation of monocyte aggregation","type":"exact"},{"name":"down regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"down-regulation of monocyte aggregation","type":"exact"},{"name":"down-regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"downregulation of monocyte aggregation","type":"exact"},{"name":"downregulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"inhibition of monocyte aggregation","type":"narrow"},{"name":"inhibition of mononuclear phagocyte aggregation","type":"exact"},{"name":"negative regulation of mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:1900624"}


id: GO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids containing sulfur, comprising cysteine, methionine and selenocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"sulfur amino acid catabolic process","secondary_identifiers":["Reactome:R-HSA-1614558"],"synonyms":[{"name":"sulfur amino acid breakdown","type":"exact"},{"name":"sulfur amino acid catabolism","type":"exact"},{"name":"sulfur amino acid degradation","type":"exact"},{"name":"sulphur amino acid catabolic process","type":"exact"},{"name":"sulphur amino acid catabolism","type":"exact"}],"termid":"GO:0000098"}


id: PBO:0058149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4444-2","termid":"PBO:0058149"}


id: GO:0042093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized thymocyte acquires specialized features of a T-helper cell.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation involved in immune response","termid":"GO:0002294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper cell differentiation","synonyms":[{"name":"T-helper cell development","type":"related"},{"name":"helper T cell differentiation","type":"exact"}],"termid":"GO:0042093"}


id: GO:0050014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-erythrulose 1-phosphate = formaldehyde + glycerone phosphate.","definition_xrefs":["EC:4.1.2.2","RHEA:20932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ketotetrose-phosphate aldolase activity","secondary_identifiers":["KEGG_REACTION:R01014","MetaCyc:KETOTETROSE-PHOSPHATE-ALDOLASE-RXN"],"synonyms":[{"name":"erythrose-1-phosphate synthase activity","type":"related"},{"name":"erythrulose-1-phosphate formaldehyde-lyase (glycerone-phosphate-forming)","type":"related"},{"name":"erythrulose-1-phosphate formaldehyde-lyase activity","type":"related"},{"name":"erythrulose-1-phosphate synthetase activity","type":"related"},{"name":"phosphoketotetrose aldolase activity","type":"related"}],"termid":"GO:0050014"}


id: PBO:0041031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2","termid":"PBO:0041031"}


id: MONDO:0017517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly of toes","termid":"MONDO:0017452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly of toes, unilateral","secondary_identifiers":["icd11.foundation:714196201","Orphanet:295132"],"synonyms":[{"name":"short toes, unilateral","type":"exact"}],"termid":"MONDO:0017517","xrefs":{"Monarch":{"xref_id":"0017517"}}}


id: GO:0051292
data:
  {"annotated_genes":["SJAG_01833"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107560],"is_not":false,"summary":null,"term":"GO:0051292"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a nuclear pore complex.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear pore organization","termid":"GO:0006999"},{"relation_name":"is_a","term_name":"pore complex assembly","termid":"GO:0046931"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01833":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"nuclear pore complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NPC assembly","type":"exact"},{"name":"nuclear pore assembly","type":"exact"},{"name":"nuclear pore biogenesis","type":"exact"},{"name":"nuclear pore biosynthesis","type":"exact"},{"name":"nuclear pore complex biogenesis","type":"exact"},{"name":"nuclear pore complex biosynthesis","type":"exact"},{"name":"nuclear pore complex formation","type":"exact"},{"name":"nuclear pore formation","type":"exact"}],"termid":"GO:0051292","terms_by_termid":{"GO:0051292":null}}


id: PBO:0086575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; contains a zinc finger motif similar to that of Adr1p","termid":"PBO:0086575"}


id: PBO:0062006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily I member 1 pseudogene","termid":"PBO:0062006"}


id: PBO:0071689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 21","termid":"PBO:0071689"}


id: PBO:0067048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 68, pseudogene","termid":"PBO:0067048"}


id: PBO:0067692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal N4","termid":"PBO:0067692"}


id: PBO:0049562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.K variant histone 1","termid":"PBO:0049562"}


id: MONDO:0018942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired skeletal muscle disease","termid":"MONDO:0016105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophagic myofasciitis","secondary_identifiers":["Orphanet:592","MEDGEN:419858","MESH:C537829","UMLS:C2931639","GARD:176","SCTID:718175009"],"synonyms":[{"name":"MMF","type":"exact"},{"name":"Macrophagic myofasciitis, childhood","type":"related"}],"termid":"MONDO:0018942","xrefs":{"Monarch":{"xref_id":"0018942"}}}


id: GO:0043169
data:
  {"annotated_genes":["SJAG_01029","SJAG_05239","SJAG_04089","SJAG_03249","SJAG_04217","SJAG_04972","SJAG_05209","SJAG_06022","SJAG_05353","SJAG_03984","SJAG_MIT04","SJAG_00449","SJAG_03643","SJAG_00225","SJAG_04309","SJAG_03578","SJAG_03918","SJAG_01465","SJAG_05223","SJAG_00402","SJAG_02052","SJAG_03324","SJAG_02048","SJAG_01858","SJAG_02464","SJAG_03982","SJAG_02253","SJAG_01507","SJAG_05273","SJAG_04242","SJAG_03657","SJAG_02763","SJAG_02587","SJAG_03255","SJAG_00403","SJAG_02954","SJAG_01088","SJAG_03112","SJAG_02990","SJAG_02003","SJAG_01797","SJAG_00173","SJAG_02796","SJAG_00561","SJAG_03743","SJAG_02532","SJAG_02629","SJAG_05245","SJAG_00013","SJAG_04249","SJAG_02785","SJAG_02340","SJAG_00552","SJAG_00644","SJAG_04414","SJAG_01740","SJAG_01150","SJAG_00638","SJAG_00803","SJAG_01910","SJAG_00188","SJAG_02652","SJAG_02107","SJAG_00989","SJAG_00485","SJAG_06576","SJAG_02582","SJAG_02847","SJAG_03222","SJAG_02215","SJAG_02080","SJAG_03626","SJAG_03822","SJAG_04574","SJAG_00072","SJAG_01560","SJAG_03939","SJAG_03185","SJAG_01129","SJAG_03275","SJAG_04584","SJAG_03855","SJAG_04429","SJAG_01212","SJAG_01052","SJAG_01179","SJAG_03761","SJAG_03430","SJAG_01673","SJAG_00637","SJAG_04966","SJAG_03096","SJAG_00052","SJAG_04410","SJAG_03286","SJAG_02510","SJAG_03628","SJAG_04743","SJAG_00209","SJAG_03362","SJAG_03313","SJAG_01400","SJAG_02963","SJAG_00410","SJAG_00642","SJAG_00231","SJAG_02691","SJAG_01209","SJAG_01418","SJAG_00204","SJAG_02319","SJAG_05237","SJAG_04791","SJAG_03812","SJAG_04991","SJAG_02399","SJAG_01760","SJAG_01945","SJAG_00475","SJAG_00251","SJAG_00509","SJAG_04396","SJAG_01266","SJAG_01281","SJAG_03689","SJAG_00701","SJAG_03755","SJAG_02203","SJAG_03840","SJAG_00304","SJAG_04449","SJAG_01044","SJAG_00865","SJAG_02334","SJAG_00111","SJAG_04682","SJAG_01149","SJAG_04619","SJAG_03976","SJAG_01768","SJAG_01310","SJAG_04487","SJAG_03862","SJAG_02433","SJAG_01992","SJAG_02709","SJAG_03813","SJAG_03370","SJAG_03945","SJAG_01110","SJAG_00827","SJAG_01859","SJAG_00116","SJAG_00063","SJAG_04496","SJAG_02347","SJAG_04579","SJAG_03647","SJAG_03373","SJAG_00758","SJAG_03225","SJAG_02897","SJAG_04013","SJAG_01075","SJAG_06642","SJAG_04901","SJAG_00483","SJAG_01269","SJAG_00321","SJAG_03465","SJAG_03509","SJAG_00461","SJAG_04043","SJAG_02794","SJAG_02199","SJAG_03183","SJAG_00532","SJAG_01765","SJAG_05345","SJAG_00717","SJAG_00406","SJAG_03322","SJAG_03886","SJAG_05173","SJAG_03051","SJAG_00221","SJAG_04466","SJAG_04183","SJAG_01776","SJAG_03180","SJAG_05234","SJAG_04998","SJAG_04990","SJAG_04677","SJAG_03227","SJAG_02415","SJAG_03665","SJAG_02381","SJAG_04373","SJAG_03240","SJAG_05337","SJAG_02786","SJAG_03658","SJAG_03734","SJAG_04553","SJAG_00752","SJAG_03326","SJAG_01533","SJAG_03482","SJAG_03276","SJAG_02908","SJAG_01313","SJAG_04336","SJAG_04970","SJAG_00096","SJAG_00502","SJAG_03175","SJAG_01731","SJAG_03448","SJAG_01832","SJAG_01677","SJAG_05343","SJAG_01004","SJAG_01414","SJAG_00249","SJAG_03231","SJAG_01511","SJAG_04915","SJAG_04030","SJAG_01321","SJAG_03029","SJAG_01140","SJAG_00456","SJAG_03750","SJAG_03615","SJAG_03793","SJAG_01996","SJAG_01686","SJAG_01875","SJAG_01165","SJAG_01665","SJAG_01584","SJAG_04063","SJAG_01375","SJAG_03103","SJAG_00742","SJAG_00755","SJAG_02569","SJAG_02741","SJAG_01702","SJAG_01523","SJAG_02459","SJAG_04407","SJAG_03303","SJAG_00381","SJAG_06611","SJAG_05118","SJAG_06599","SJAG_04621","SJAG_04896","SJAG_04051","SJAG_04448","SJAG_00964","SJAG_04724","SJAG_00386","SJAG_00124","SJAG_00706","SJAG_04403","SJAG_06597","SJAG_04898","SJAG_01372","SJAG_01457","SJAG_04189","SJAG_01046","SJAG_02348","SJAG_02813","SJAG_00792","SJAG_03196","SJAG_04233","SJAG_03866","SJAG_04205","SJAG_03018","SJAG_01535","SJAG_01081","SJAG_03771","SJAG_02007","SJAG_03613","SJAG_00819","SJAG_00724","SJAG_00832","SJAG_03599","SJAG_06636","SJAG_01593","SJAG_02247","SJAG_04768","SJAG_01200","SJAG_00341","SJAG_01355","SJAG_03473","SJAG_03519","SJAG_01254","SJAG_00926","SJAG_03043","SJAG_02096","SJAG_04151","SJAG_03393","SJAG_00439","SJAG_02261","SJAG_04789","SJAG_03006","SJAG_00337","SJAG_01948","SJAG_02627","SJAG_03405","SJAG_01772","SJAG_04425","SJAG_03268","SJAG_03120","SJAG_04842","SJAG_03883","SJAG_00751","SJAG_03191","SJAG_00727","SJAG_03142","SJAG_03241","SJAG_02730","SJAG_01572","SJAG_02370","SJAG_01684","SJAG_04781","SJAG_02165","SJAG_02521","SJAG_00853","SJAG_04641","SJAG_03985","SJAG_00946","SJAG_05012","SJAG_03723","SJAG_03879","SJAG_05679","SJAG_06639","SJAG_02397","SJAG_01351","SJAG_03831","SJAG_04297","SJAG_05373","SJAG_02766","SJAG_03496","SJAG_02298","SJAG_02503","SJAG_02689","SJAG_00134","SJAG_05311","SJAG_03090","SJAG_03538","SJAG_02752","SJAG_00923","SJAG_03752","SJAG_03135","SJAG_03930","SJAG_04679","SJAG_05105","SJAG_01575","SJAG_01715","SJAG_00464","SJAG_03346","SJAG_05003","SJAG_03153","SJAG_04362","SJAG_01284","SJAG_05243","SJAG_00467","SJAG_01669","SJAG_00719","SJAG_02659","SJAG_00181","SJAG_00166","SJAG_04106","SJAG_05323","SJAG_04292","SJAG_03388","SJAG_00228","SJAG_05192","SJAG_03943","SJAG_03697","SJAG_04048","SJAG_02539","SJAG_03088","SJAG_00240","SJAG_02583","SJAG_04353","SJAG_01498","SJAG_01430","SJAG_03861","SJAG_03884","SJAG_03230","SJAG_01226","SJAG_02149","SJAG_03032","SJAG_00396","SJAG_02019","SJAG_01787","SJAG_01298","SJAG_04788","SJAG_01404","SJAG_05338","SJAG_03588","SJAG_04238","SJAG_00612","SJAG_02290","SJAG_02679","SJAG_00037","SJAG_00501","SJAG_04913","SJAG_04016","SJAG_04533","SJAG_00032","SJAG_00498","SJAG_02349","SJAG_01854","SJAG_00296","SJAG_00500","SJAG_02252","SJAG_03005","SJAG_00910","SJAG_00988","SJAG_04080","SJAG_03811","SJAG_01734","SJAG_02299","SJAG_05354","SJAG_02746","SJAG_03254","SJAG_03850","SJAG_04859","SJAG_00044","SJAG_00353","SJAG_04374","SJAG_02435","SJAG_00664","SJAG_00399","SJAG_02668","SJAG_00153","SJAG_04129","SJAG_03974","SJAG_01929","SJAG_00802","SJAG_04757","SJAG_02734","SJAG_03071","SJAG_02369","SJAG_03140","SJAG_01955","SJAG_04865","SJAG_04516","SJAG_04571","SJAG_04024","SJAG_03044","SJAG_00309","SJAG_01253","SJAG_03539","SJAG_04726","SJAG_01325","SJAG_01930","SJAG_05274","SJAG_00668","SJAG_00199","SJAG_02694","SJAG_02206","SJAG_03548","SJAG_02033","SJAG_01194","SJAG_04213","SJAG_04886","SJAG_03911","SJAG_01600","SJAG_00081","SJAG_02648","SJAG_00163","SJAG_05398","SJAG_03387","SJAG_03983","SJAG_05010","SJAG_00045","SJAG_04747","SJAG_00074","SJAG_04712","SJAG_04538","SJAG_01542","SJAG_02511","SJAG_05264","SJAG_03635","SJAG_00555","SJAG_02575","SJAG_02938","SJAG_01280","SJAG_04765","SJAG_05242","SJAG_03396","SJAG_00577","SJAG_02956","SJAG_02406","SJAG_02461","SJAG_00451","SJAG_00119","SJAG_04845","SJAG_03428","SJAG_05236","SJAG_00412","SJAG_02589","SJAG_04479","SJAG_01626","SJAG_MIT20","SJAG_01694","SJAG_03968","SJAG_04368","SJAG_02903","SJAG_01672","SJAG_01137","SJAG_00237","SJAG_03893","SJAG_02818","SJAG_05344","SJAG_02277","SJAG_01707","SJAG_01896","SJAG_01637","SJAG_04054","SJAG_02808","SJAG_02138","SJAG_01630","SJAG_01648","SJAG_02851","SJAG_00896","SJAG_00527","SJAG_01997","SJAG_00934","SJAG_02169","SJAG_03562","SJAG_00510","SJAG_03744","SJAG_04882","SJAG_02447","SJAG_04434","SJAG_03398","SJAG_03695","SJAG_00436","SJAG_00610","SJAG_03250","SJAG_01450","SJAG_03022","SJAG_01574","SJAG_01728","SJAG_05200","SJAG_00669","SJAG_01583","SJAG_04391","SJAG_00067","SJAG_02043","SJAG_03618"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58878,61761,63421,64836,116783],"is_not":false,"summary":null,"term":"GO:0043169"},{"annotations":[68378,88674,69862,73713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016208"},{"annotations":[97164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046870"},{"annotations":[67214,102651,59253,59938,67861,68862,59568,101430,105924,107856,108468,112105,113554,67647,78322,117994,117433,60074,66545,68863,68913,60078,116791,59193,59635,110820,71981,78709,79147,58858,118663,77967,66428,103419,105091,65675,106276,63627,108091,117323,59810,58818,89401,96085,74787,73835,61051,60198,60565,61184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005509"},{"annotations":[101921,77855,116850,61258,68566,66050,106663,77523,74119,114829,118824,74771,118873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005507"},{"annotations":[71325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008199"},{"annotations":[71324,77799,66739,101023,100378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008198"},{"annotations":[74037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016594"},{"annotations":[57069,117157,74958,59017,58690,73516,67409,93860,67954,112589,77352,61736,59900,57132,59559,63447,60044,79642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005506"},{"annotations":[57738,77345,105712,67704,58010,58347,59110,58127,60569,56949,62425,61492,63221,58854,64383,65275,65732,63331,61074,62478,68165,79720,79266,68413,88489,59971,64208,91256,57126,70817,60838,62659,67235,64932,97004,58565,61634,68439,99651,102730,103552,109936,57654,56983,65935,61662,65480,91350,91468,100906,60466,62643,61227,67440,67698,90106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000287"},{"annotations":[68197,57773,105713,65944,70257,115455,60079,105562,76932,99652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030145"},{"annotations":[93114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046911"},{"annotations":[57964,59861,60477,64934,63248,63107,60216,62216,64224,66714,62808,66746,73577,95982,60500,63906,67179,60264,58636,67883,96218,62958,60794,61407,65344,57669,66324,64113,59254,66679,59816,58067,69300,69339,63319,78980,60691,66624,59390,59304,62675,64016,65838,62375,65219,102566,57043,103083,69076,69286,92074,57714,104534,65820,61467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046872"},{"annotations":[58956,59294,58689,65249,65464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016151"},{"annotations":[69646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031210"},{"annotations":[68415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030955"},{"annotations":[87494,87495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901691"},{"annotations":[57341,97648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904047"},{"annotations":[66952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030975"},{"annotations":[58566,58855,64384,72970,57592,61663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030976"},{"annotations":[69019,66135,65748,68864,89972,67228,76321,62843,104822,110469,69389,65022,114445,62233,60776,97954,59003,61292,63816,60966,65847,67417,89337,59998,114034,66201,69409,107678,56974,59040,60028,60397,59569,64513,62695,65596,57156,65859,66104,59359,66204,69672,74948,101497,111653,62107,99607,112751,60128,57067,66625,90193,58212,64407,62051,66673,64350,68733,64442,63853,58868,99608,115460,62565,60476,112753,67490,66597,61632,78195,58097,63206,66610,63257,61326,64741,60813,69211,66081,63992,112752,58629,59259,57057,61577,66124,57356,58852,59818,64203,113428,115789,65711,67299,93896,64909,60810,67377,64275,58151,57305,60763,64045,66364,67523,67563,90384,61654,62140,87290,88101,98110,58728,87815,72497,60208,60323,106626,63161,65371,64207,88823,61729,111995,60377,57671,65993,102590,74935,65058,59945,89770,63329,91437,62738,59295,62109,63266,65791,56913,68774,105538,64872,94291,76802,60242,67006,61141,60437,62170,62673,98775,59263,61713,107426,61216,66027,64311,57359,58415,63942,66572,113456,68211,67550,68115,117836,57644,63398,64078,67047,68611,109365,64041,60349,61502,59691,61364,62870,64868,62899,91731,117121,68798,67151,66619,60808,66825,57712,61913,91335,68675,71463,64970,115486,66145,62626,57605,61787,68936,59197,58801,58589,63596,60667,65018,57927,64844,102127,63005,87184,65475,97746,60715,57496,62715,64527,57416,57575,65067,65852,67361,96382,90040,90553,72758,61933,97413,65736,108032,67666,67189,64546,66882,63738,65388,71206,77952,58310,68288,95512,109344,60256,70897,58328,66941,66740,64298,67527,102540,63655,65983,62599,65072,103369,112755,62045,66860,63016,62986,69064,64049,67124,69541,58207,68053,95208,76946,61604,62927,92800,64664,66414,61556,89319,89997,104681,61981,61039,58997,57135,58459,64752,65924,69041,94804,63710,97230,112931,114410,57639,66379,65250,78799,68761,105539,62756,111994,67895,60069,88397,118648,60353,103396,59606,115526,72436,59618,60297,65419,61057,67034,59881,62678,67404,68105,62270,68582,68934,96467,67484,58559,69353,65143,66650,62123,65780,65397,66304,67907,64778,61527,59370,60757,58725,64528,99309,63922,60823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008270"}]},"cv_name":"molecular_function","definition":"Binding to a cation, a charged atom or group of atoms with a net positive charge.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion binding","termid":"GO:0043167"}],"gene_count":560,"genes_by_uniquename":{"SJAG_00013":null,"SJAG_00032":null,"SJAG_00037":null,"SJAG_00044":null,"SJAG_00045":null,"SJAG_00052":null,"SJAG_00063":null,"SJAG_00067":null,"SJAG_00072":null,"SJAG_00074":null,"SJAG_00081":null,"SJAG_00096":null,"SJAG_00111":null,"SJAG_00116":null,"SJAG_00119":null,"SJAG_00124":null,"SJAG_00134":null,"SJAG_00153":null,"SJAG_00163":null,"SJAG_00166":null,"SJAG_00173":null,"SJAG_00181":null,"SJAG_00188":null,"SJAG_00199":null,"SJAG_00204":null,"SJAG_00209":null,"SJAG_00221":null,"SJAG_00225":null,"SJAG_00228":null,"SJAG_00231":null,"SJAG_00237":null,"SJAG_00240":null,"SJAG_00249":null,"SJAG_00251":null,"SJAG_00296":null,"SJAG_00304":null,"SJAG_00309":null,"SJAG_00321":null,"SJAG_00337":null,"SJAG_00341":null,"SJAG_00353":null,"SJAG_00381":null,"SJAG_00386":null,"SJAG_00396":null,"SJAG_00399":null,"SJAG_00402":null,"SJAG_00403":null,"SJAG_00406":null,"SJAG_00410":null,"SJAG_00412":null,"SJAG_00436":null,"SJAG_00439":null,"SJAG_00449":null,"SJAG_00451":null,"SJAG_00456":null,"SJAG_00461":null,"SJAG_00464":null,"SJAG_00467":null,"SJAG_00475":null,"SJAG_00483":null,"SJAG_00485":null,"SJAG_00498":null,"SJAG_00500":null,"SJAG_00501":null,"SJAG_00502":null,"SJAG_00509":null,"SJAG_00510":null,"SJAG_00527":null,"SJAG_00532":null,"SJAG_00552":null,"SJAG_00555":null,"SJAG_00561":null,"SJAG_00577":null,"SJAG_00610":null,"SJAG_00612":null,"SJAG_00637":null,"SJAG_00638":null,"SJAG_00642":null,"SJAG_00644":null,"SJAG_00664":null,"SJAG_00668":null,"SJAG_00669":null,"SJAG_00701":null,"SJAG_00706":null,"SJAG_00717":null,"SJAG_00719":null,"SJAG_00724":null,"SJAG_00727":null,"SJAG_00742":null,"SJAG_00751":null,"SJAG_00752":null,"SJAG_00755":null,"SJAG_00758":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00803":null,"SJAG_00819":null,"SJAG_00827":null,"SJAG_00832":null,"SJAG_00853":null,"SJAG_00865":null,"SJAG_00896":null,"SJAG_00910":null,"SJAG_00923":null,"SJAG_00926":null,"SJAG_00934":null,"SJAG_00946":null,"SJAG_00964":null,"SJAG_00988":null,"SJAG_00989":null,"SJAG_01004":null,"SJAG_01029":null,"SJAG_01044":null,"SJAG_01046":null,"SJAG_01052":null,"SJAG_01075":null,"SJAG_01081":null,"SJAG_01088":null,"SJAG_01110":null,"SJAG_01129":null,"SJAG_01137":null,"SJAG_01140":null,"SJAG_01149":null,"SJAG_01150":null,"SJAG_01165":null,"SJAG_01179":null,"SJAG_01194":null,"SJAG_01200":null,"SJAG_01209":null,"SJAG_01212":null,"SJAG_01226":null,"SJAG_01253":null,"SJAG_01254":null,"SJAG_01266":null,"SJAG_01269":null,"SJAG_01280":null,"SJAG_01281":null,"SJAG_01284":null,"SJAG_01298":null,"SJAG_01310":null,"SJAG_01313":null,"SJAG_01321":null,"SJAG_01325":null,"SJAG_01351":null,"SJAG_01355":null,"SJAG_01372":null,"SJAG_01375":null,"SJAG_01400":null,"SJAG_01404":null,"SJAG_01414":null,"SJAG_01418":null,"SJAG_01430":null,"SJAG_01450":null,"SJAG_01457":null,"SJAG_01465":null,"SJAG_01498":null,"SJAG_01507":null,"SJAG_01511":null,"SJAG_01523":null,"SJAG_01533":null,"SJAG_01535":null,"SJAG_01542":null,"SJAG_01560":null,"SJAG_01572":null,"SJAG_01574":null,"SJAG_01575":null,"SJAG_01583":null,"SJAG_01584":null,"SJAG_01593":null,"SJAG_01600":null,"SJAG_01626":null,"SJAG_01630":null,"SJAG_01637":null,"SJAG_01648":null,"SJAG_01665":null,"SJAG_01669":null,"SJAG_01672":null,"SJAG_01673":null,"SJAG_01677":null,"SJAG_01684":null,"SJAG_01686":null,"SJAG_01694":null,"SJAG_01702":null,"SJAG_01707":null,"SJAG_01715":null,"SJAG_01728":null,"SJAG_01731":null,"SJAG_01734":null,"SJAG_01740":null,"SJAG_01760":null,"SJAG_01765":null,"SJAG_01768":null,"SJAG_01772":null,"SJAG_01776":null,"SJAG_01787":null,"SJAG_01797":null,"SJAG_01832":null,"SJAG_01854":null,"SJAG_01858":null,"SJAG_01859":null,"SJAG_01875":null,"SJAG_01896":null,"SJAG_01910":null,"SJAG_01929":null,"SJAG_01930":null,"SJAG_01945":null,"SJAG_01948":null,"SJAG_01955":null,"SJAG_01992":null,"SJAG_01996":null,"SJAG_01997":null,"SJAG_02003":null,"SJAG_02007":null,"SJAG_02019":null,"SJAG_02033":null,"SJAG_02043":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02080":null,"SJAG_02096":null,"SJAG_02107":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02165":null,"SJAG_02169":null,"SJAG_02199":null,"SJAG_02203":null,"SJAG_02206":null,"SJAG_02215":null,"SJAG_02247":null,"SJAG_02252":null,"SJAG_02253":null,"SJAG_02261":null,"SJAG_02277":null,"SJAG_02290":null,"SJAG_02298":null,"SJAG_02299":null,"SJAG_02319":null,"SJAG_02334":null,"SJAG_02340":null,"SJAG_02347":null,"SJAG_02348":null,"SJAG_02349":null,"SJAG_02369":null,"SJAG_02370":null,"SJAG_02381":null,"SJAG_02397":null,"SJAG_02399":null,"SJAG_02406":null,"SJAG_02415":null,"SJAG_02433":null,"SJAG_02435":null,"SJAG_02447":null,"SJAG_02459":null,"SJAG_02461":null,"SJAG_02464":null,"SJAG_02503":null,"SJAG_02510":null,"SJAG_02511":null,"SJAG_02521":null,"SJAG_02532":null,"SJAG_02539":null,"SJAG_02569":null,"SJAG_02575":null,"SJAG_02582":null,"SJAG_02583":null,"SJAG_02587":null,"SJAG_02589":null,"SJAG_02627":null,"SJAG_02629":null,"SJAG_02648":null,"SJAG_02652":null,"SJAG_02659":null,"SJAG_02668":null,"SJAG_02679":null,"SJAG_02689":null,"SJAG_02691":null,"SJAG_02694":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02734":null,"SJAG_02741":null,"SJAG_02746":null,"SJAG_02752":null,"SJAG_02763":null,"SJAG_02766":null,"SJAG_02785":null,"SJAG_02786":null,"SJAG_02794":null,"SJAG_02796":null,"SJAG_02808":null,"SJAG_02813":null,"SJAG_02818":null,"SJAG_02847":null,"SJAG_02851":null,"SJAG_02897":null,"SJAG_02903":null,"SJAG_02908":null,"SJAG_02938":null,"SJAG_02954":null,"SJAG_02956":null,"SJAG_02963":null,"SJAG_02990":null,"SJAG_03005":null,"SJAG_03006":null,"SJAG_03018":null,"SJAG_03022":null,"SJAG_03029":null,"SJAG_03032":null,"SJAG_03043":null,"SJAG_03044":null,"SJAG_03051":null,"SJAG_03071":null,"SJAG_03088":null,"SJAG_03090":null,"SJAG_03096":null,"SJAG_03103":null,"SJAG_03112":null,"SJAG_03120":null,"SJAG_03135":null,"SJAG_03140":null,"SJAG_03142":null,"SJAG_03153":null,"SJAG_03175":null,"SJAG_03180":null,"SJAG_03183":null,"SJAG_03185":null,"SJAG_03191":null,"SJAG_03196":null,"SJAG_03222":null,"SJAG_03225":null,"SJAG_03227":null,"SJAG_03230":null,"SJAG_03231":null,"SJAG_03240":null,"SJAG_03241":null,"SJAG_03249":null,"SJAG_03250":null,"SJAG_03254":null,"SJAG_03255":null,"SJAG_03268":null,"SJAG_03275":null,"SJAG_03276":null,"SJAG_03286":null,"SJAG_03303":null,"SJAG_03313":null,"SJAG_03322":null,"SJAG_03324":null,"SJAG_03326":null,"SJAG_03346":null,"SJAG_03362":null,"SJAG_03370":null,"SJAG_03373":null,"SJAG_03387":null,"SJAG_03388":null,"SJAG_03393":null,"SJAG_03396":null,"SJAG_03398":null,"SJAG_03405":null,"SJAG_03428":null,"SJAG_03430":null,"SJAG_03448":null,"SJAG_03465":null,"SJAG_03473":null,"SJAG_03482":null,"SJAG_03496":null,"SJAG_03509":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03539":null,"SJAG_03548":null,"SJAG_03562":null,"SJAG_03578":null,"SJAG_03588":null,"SJAG_03599":null,"SJAG_03613":null,"SJAG_03615":null,"SJAG_03618":null,"SJAG_03626":null,"SJAG_03628":null,"SJAG_03635":null,"SJAG_03643":null,"SJAG_03647":null,"SJAG_03657":null,"SJAG_03658":null,"SJAG_03665":null,"SJAG_03689":null,"SJAG_03695":null,"SJAG_03697":null,"SJAG_03723":null,"SJAG_03734":null,"SJAG_03743":null,"SJAG_03744":null,"SJAG_03750":null,"SJAG_03752":null,"SJAG_03755":null,"SJAG_03761":null,"SJAG_03771":null,"SJAG_03793":null,"SJAG_03811":null,"SJAG_03812":null,"SJAG_03813":null,"SJAG_03822":null,"SJAG_03831":null,"SJAG_03840":null,"SJAG_03850":null,"SJAG_03855":null,"SJAG_03861":null,"SJAG_03862":null,"SJAG_03866":null,"SJAG_03879":null,"SJAG_03883":null,"SJAG_03884":null,"SJAG_03886":null,"SJAG_03893":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_03930":null,"SJAG_03939":null,"SJAG_03943":null,"SJAG_03945":null,"SJAG_03968":null,"SJAG_03974":null,"SJAG_03976":null,"SJAG_03982":null,"SJAG_03983":null,"SJAG_03984":null,"SJAG_03985":null,"SJAG_04013":null,"SJAG_04016":null,"SJAG_04024":null,"SJAG_04030":null,"SJAG_04043":null,"SJAG_04048":null,"SJAG_04051":null,"SJAG_04054":null,"SJAG_04063":null,"SJAG_04080":null,"SJAG_04089":null,"SJAG_04106":null,"SJAG_04129":null,"SJAG_04151":null,"SJAG_04183":null,"SJAG_04189":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04217":null,"SJAG_04233":null,"SJAG_04238":null,"SJAG_04242":null,"SJAG_04249":null,"SJAG_04292":null,"SJAG_04297":null,"SJAG_04309":null,"SJAG_04336":null,"SJAG_04353":null,"SJAG_04362":null,"SJAG_04368":null,"SJAG_04373":null,"SJAG_04374":null,"SJAG_04391":null,"SJAG_04396":null,"SJAG_04403":null,"SJAG_04407":null,"SJAG_04410":null,"SJAG_04414":null,"SJAG_04425":null,"SJAG_04429":null,"SJAG_04434":null,"SJAG_04448":null,"SJAG_04449":null,"SJAG_04466":null,"SJAG_04479":null,"SJAG_04487":null,"SJAG_04496":null,"SJAG_04516":null,"SJAG_04533":null,"SJAG_04538":null,"SJAG_04553":null,"SJAG_04571":null,"SJAG_04574":null,"SJAG_04579":null,"SJAG_04584":null,"SJAG_04619":null,"SJAG_04621":null,"SJAG_04641":null,"SJAG_04677":null,"SJAG_04679":null,"SJAG_04682":null,"SJAG_04712":null,"SJAG_04724":null,"SJAG_04726":null,"SJAG_04743":null,"SJAG_04747":null,"SJAG_04757":null,"SJAG_04765":null,"SJAG_04768":null,"SJAG_04781":null,"SJAG_04788":null,"SJAG_04789":null,"SJAG_04791":null,"SJAG_04842":null,"SJAG_04845":null,"SJAG_04859":null,"SJAG_04865":null,"SJAG_04882":null,"SJAG_04886":null,"SJAG_04896":null,"SJAG_04898":null,"SJAG_04901":null,"SJAG_04913":null,"SJAG_04915":null,"SJAG_04966":null,"SJAG_04970":null,"SJAG_04972":null,"SJAG_04990":null,"SJAG_04991":null,"SJAG_04998":null,"SJAG_05003":null,"SJAG_05010":null,"SJAG_05012":null,"SJAG_05105":null,"SJAG_05118":null,"SJAG_05173":null,"SJAG_05192":null,"SJAG_05200":null,"SJAG_05209":null,"SJAG_05223":null,"SJAG_05234":null,"SJAG_05236":null,"SJAG_05237":null,"SJAG_05239":null,"SJAG_05242":null,"SJAG_05243":null,"SJAG_05245":null,"SJAG_05264":null,"SJAG_05273":null,"SJAG_05274":null,"SJAG_05311":null,"SJAG_05323":null,"SJAG_05337":null,"SJAG_05338":null,"SJAG_05343":null,"SJAG_05344":null,"SJAG_05345":null,"SJAG_05353":null,"SJAG_05354":null,"SJAG_05373":null,"SJAG_05398":null,"SJAG_05679":null,"SJAG_06022":null,"SJAG_06576":null,"SJAG_06597":null,"SJAG_06599":null,"SJAG_06611":null,"SJAG_06636":null,"SJAG_06639":null,"SJAG_06642":null,"SJAG_MIT04":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cation binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0043169","terms_by_termid":{"GO:0000287":null,"GO:0005506":null,"GO:0005507":null,"GO:0005509":null,"GO:0008198":null,"GO:0008199":null,"GO:0008270":null,"GO:0016151":null,"GO:0016208":null,"GO:0016594":null,"GO:0030145":null,"GO:0030955":null,"GO:0030975":null,"GO:0030976":null,"GO:0031210":null,"GO:0043169":null,"GO:0046870":null,"GO:0046872":null,"GO:0046911":null,"GO:1901691":null,"GO:1904047":null}}


id: PBO:0028490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-separate_mitotic_half_spindles_present","termid":"PBO:0028490"}


id: GO:0047384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + [hydroxymethylglutaryl-CoA reductase (NADPH)] phosphate = phosphate + [hydroxymethylglutaryl-CoA reductase (NADPH)].","definition_xrefs":["MetaCyc:3.1.3.47-RXN","EC:3.1.3.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016788","GO:0003824","GO:0016787","GO:0004721"],"is_obsolete":false,"name":"[hydroxymethylglutaryl-CoA reductase (NADPH)]-phosphatase activity","synonyms":[{"name":"hydroxymethylglutaryl-CoA reductase (NADPH)-phosphatase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase (NADPH)-phosphate phosphohydrolase activity","type":"related"},{"name":"reductase phosphatase activity","type":"broad"}],"termid":"GO:0047384"}


id: MONDO:0006017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete western equine encephalitis (obsolete MONDO:0006017)","termid":"MONDO:0006017","xrefs":{"Monarch":{"xref_id":"0006017"}}}


id: PBO:0003960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, involved in translation (predicted)","termid":"PBO:0003960"}


id: GO:0019048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in the structure or processes of its host organism.","definition_xrefs":["GOC:bf","ISBN:0781718325","GOC:jl","UniProtKB-KW:KW-0945"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host process (obsolete GO:0019048)","secondary_identifiers":["VZ:886"],"synonyms":[{"name":"disruption by virus of host cell","type":"related"},{"name":"host-virus interaction","type":"exact"},{"name":"modulation by virus of host anatomical structure or process","type":"related"},{"name":"modulation by virus of host anatomy or process","type":"exact"},{"name":"modulation by virus of host morphology or physiology","type":"related"},{"name":"viral interaction with host","type":"exact"},{"name":"viral-host process","type":"exact"},{"name":"virus-host interaction","type":"broad"},{"name":"virus-host process","type":"exact"}],"termid":"GO:0019048"}


id: MONDO:0015077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenal/paraganglial tumor (obsolete MONDO:0015077)","termid":"MONDO:0015077","xrefs":{"Monarch":{"xref_id":"0015077"}}}


id: GO:0090295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["GOC:mah","GOC:rb","PMID:19104072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"catabolite repression","termid":"GO:0061984"},{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription","termid":"GO:0090293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"nitrogen catabolite repression of transcription","synonyms":[{"name":"negative regulation of transcription by nitrogen catabolites","type":"exact"},{"name":"nitrogen catabolite repression","type":"exact"}],"termid":"GO:0090295"}


id: PBO:0031129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-genome_stability_defects_(obsolete_FYPO:0000241)","termid":"PBO:0031129"}


id: GO:0098801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a system process, a multicellular organismal process carried out by the renal system.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"renal system process","termid":"GO:0003014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of renal system process","termid":"GO:0098801"}


id: GO:0070738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the posttranslational transfer of one or more glycine residues to a specific glutamate residue on a target tubulin molecule; acts on alpha or beta tubulin.","definition_xrefs":["GOC:mah","PMID:19524510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glycine ligase activity","termid":"GO:0070735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"tubulin-glycine ligase activity","synonyms":[{"name":"tubulin glycylase activity","type":"exact"}],"termid":"GO:0070738"}


id: PBO:0070078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 35, pseudogene","termid":"PBO:0070078"}


id: GO:0004379
data:
  {"annotated_genes":["SJAG_00102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77938],"is_not":false,"summary":null,"term":"GO:0004379"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide.","definition_xrefs":["EC:2.3.1.97"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"},{"relation_name":"is_a","term_name":"myristoyltransferase activity","termid":"GO:0019107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glycylpeptide N-tetradecanoyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:2.3.1.97-RXN","GO:0019106","Reactome:R-HSA-2534087","RHEA:15521","Reactome:R-HSA-184392","Reactome:R-HSA-203611"],"synonyms":[{"name":"N-myristoyltransferase activity","type":"exact"},{"name":"myristoyl-CoA-protein N-myristoyltransferase activity","type":"related"},{"name":"myristoyl-coenzyme A:protein N-myristoyl transferase activity","type":"related"},{"name":"myristoylating enzymes","type":"related"},{"name":"peptide N-myristoyltransferase activity","type":"related"},{"name":"peptide N-tetradecanoyltransferase activity","type":"related"},{"name":"protein N-myristoyltransferase activity","type":"related"},{"name":"tetradecanoyl-CoA:glycylpeptide N-tetradecanoyltransferase activity","type":"related"}],"termid":"GO:0004379","terms_by_termid":{"GO:0004379":null}}


id: GO:1902927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of inulin.","definition_xrefs":["PMID:23104410","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructan catabolic process","termid":"GO:0010147"},{"relation_name":"is_a","term_name":"inulin metabolic process","termid":"GO:1902926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"inulin catabolic process","synonyms":[{"name":"inulin breakdown","type":"exact"},{"name":"inulin catabolism","type":"exact"},{"name":"inulin degradation","type":"exact"}],"termid":"GO:1902927"}


id: PBO:0029069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_cellular_response_to_salt_stress","termid":"PBO:0029069"}


id: PBO:0081622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 551","termid":"PBO:0081622"}


id: PBO:0070219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 152 pseudogene","termid":"PBO:0070219"}


id: PR:Q9P7V8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphate carrier protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03484","PANTHER:PTHR24089:SF22","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphate carrier protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.13c","secondary_identifiers":["UniProtKB:Q9P7V8"],"synonyms":[{"name":"Spom972h-SLC25A3","type":"exact"}],"termid":"PR:Q9P7V8"}


id: GO:0034498
data:
  {"annotated_genes":["SJAG_04219","SJAG_02750"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71196,115015],"is_not":false,"summary":null,"term":"GO:0034498"}]},"cv_name":"biological_process","definition":"The directed movement of substances from early endosomes to the Golgi.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02750":null,"SJAG_04219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"early endosome to Golgi transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PGE to Golgi transport","type":"exact"},{"name":"post-Golgi endosome to Golgi transport","type":"exact"}],"termid":"GO:0034498","terms_by_termid":{"GO:0034498":null}}


id: PBO:0056840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT4 family member E, pseudogene","termid":"PBO:0056840"}


id: MONDO:0011990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign neonatal seizures","termid":"MONDO:0016027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial neonatal, 3","secondary_identifiers":["OMIM:608217","MESH:C564274","UMLS:C1842382","GARD:15427","MEDGEN:334063"],"synonyms":[{"name":"BFNS3","type":"exact"},{"name":"convulsions, benign familial neonatal, 3","type":"related"},{"name":"seizures, benign familial neonatal, 3","type":"exact"}],"termid":"MONDO:0011990","xrefs":{"Monarch":{"xref_id":"0011990"}}}


id: MONDO:0008887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic bronchiectasis","termid":"MONDO:0018956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiectasis with or without elevated sweat chloride 1","secondary_identifiers":["OMIM:211400","GARD:18054","DOID:0080526","MESH:C567618","UMLS:C2749757","MEDGEN:440868"],"synonyms":[{"name":"BESC1","type":"related"},{"name":"bronchiectasis with or without elevated sweat chloride 1","type":"exact"},{"name":"bronchiectasis with or without elevated sweat chloride 1, modifier of","type":"exact"},{"name":"bronchiectasis with or without elevated sweat chloride type 1","type":"exact"},{"name":"cystic fibrosis-like syndrome","type":"related"}],"termid":"MONDO:0008887","xrefs":{"Monarch":{"xref_id":"0008887"}}}


id: PBO:0088358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease, XP-G family protein Ast1","termid":"PBO:0088358"}


id: GO:0031843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 neuropeptide Y receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor binding","termid":"GO:0031841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 2 neuropeptide Y receptor binding","synonyms":[{"name":"type 2 neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031843"}


id: PBO:0055041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2456","termid":"PBO:0055041"}


id: GO:0031011
data:
  {"annotated_genes":["SJAG_01611","SJAG_02303","SJAG_00735","SJAG_04355","SJAG_00045","SJAG_01016","SJAG_04989","SJAG_00746","SJAG_03033","SJAG_00873","SJAG_03036","SJAG_03839","SJAG_03579","SJAG_02872","SJAG_05020","SJAG_02549","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57841,61108,66622,69684,71296,71536,72165,72343,72604,75901,87589,88658,93802,101357,108849,112933,115191],"is_not":false,"summary":null,"term":"GO:0031011"}]},"cv_name":"cellular_component","definition":"A multisubunit protein complex that contains the Ino80p ATPase; exhibits chromatin remodeling activity.","definition_xrefs":["GOC:jh","GOC:rb","PMID:19355820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"INO80-type complex","termid":"GO:0097346"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00735":null,"SJAG_00746":null,"SJAG_00873":null,"SJAG_01016":null,"SJAG_01611":null,"SJAG_02303":null,"SJAG_02549":null,"SJAG_02872":null,"SJAG_03033":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03579":null,"SJAG_03839":null,"SJAG_04355":null,"SJAG_04989":null,"SJAG_05020":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"Ino80 complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"INO80 chromatin remodeling complex","type":"exact"}],"termid":"GO:0031011","terms_by_termid":{"GO:0031011":null}}


id: PR:Q9P7B7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7B7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C140.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC140.04","synonyms":[{"name":"Spom972h-ctr1","type":"exact"}],"termid":"PR:Q9P7B7"}


id: MONDO:0010226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 2","secondary_identifiers":["DOID:0111777","MEDGEN:341190","OMIM:300018","UMLS:C1848296","MESH:C535601","NANDO:1200404","GARD:9159"],"synonyms":[{"name":"46,XY SEX reversal 2","type":"related"},{"name":"46,XY Sex reversal type 2","type":"exact"},{"name":"46,XY Sex reversal, Dax1-related","type":"related"},{"name":"46,XY sex reversal 2","type":"exact"},{"name":"46XY sex reversal 2, dosage-sensitive","type":"exact"},{"name":"SRXY2","type":"related"},{"name":"dosage-sensitive Sex reversal","type":"related"}],"termid":"MONDO:0010226","xrefs":{"Monarch":{"xref_id":"0010226"}}}


id: GO:0010819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of T cell chemotaxis. T cell chemotaxis is the directed movement of a T cell in response to an external stimulus.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte chemotaxis","termid":"GO:1901623"},{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"regulates","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell chemotaxis","termid":"GO:0010819"}


id: PBO:0078275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 9-3","termid":"PBO:0078275"}


id: MONDO:1012017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atopy, non-human animal","termid":"MONDO:1011733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atopy, dog","secondary_identifiers":["OMIA:000082-9615"],"termid":"MONDO:1012017","xrefs":{"Monarch":{"xref_id":"1012017"}}}


id: PBO:0054500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1900","termid":"PBO:0054500"}


id: PBO:0067708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 6","termid":"PBO:0067708"}


id: PBO:0005240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase (predicted)","termid":"PBO:0005240"}


id: MONDO:0010351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi anemia caused by mutations of the FANCB gene. This gene encodes the protein for complementation group B.","definition_xrefs":["NCIT:C125703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005570","MONDO:0005066","MONDO:0005046","MONDO:0002280"],"is_obsolete":false,"name":"Fanconi anemia complementation group B","secondary_identifiers":["MESH:C564497","MEDGEN:336901","GARD:15257","UMLS:C1845292","OMIM:300514","DOID:0111098"],"synonyms":[{"name":"FA2","type":"exact"},{"name":"FACB","type":"exact"},{"name":"FANCB","type":"exact"},{"name":"Fanconi Anemia, complementation group type B","type":"exact"},{"name":"Fanconi anaemia complementation group type B","type":"exact"},{"name":"Fanconi anemia complementation group B","type":"exact"},{"name":"Fanconi anemia complementation group type B","type":"exact"},{"name":"Fanconi anemia, complementation group B","type":"related"},{"name":"Fanconi anemia, complementation group B, X-linked recessive","type":"exact"},{"name":"Fanconi pancytopenia type 2","type":"exact"},{"name":"Fanconi pancytopenia, type 2","type":"related"}],"termid":"MONDO:0010351","xrefs":{"Monarch":{"xref_id":"0010351"}}}


id: SO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where there is no resulting change to the encoded amino acid.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_sequence_variant","termid":"SO:0001580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synonymous_variant","secondary_identifiers":["http://vat.gersteinlab.org/formats.php","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","SO:0001588","http://en.wikipedia.org/wiki/Silent_mutation","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://en.wikipedia.org/wiki/Synonymous_mutation","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:synonymous SNV","type":"related"},{"name":"Jannovar:synonymous_variant","type":"exact"},{"name":"Seattleseq:synonymous","type":"exact"},{"name":"Seattleseq:synonymous-near-splice","type":"related"},{"name":"VAAST:synonymous_codon","type":"exact"},{"name":"VAAST:synonymous_variant","type":"exact"},{"name":"VAT:synonymous","type":"exact"},{"name":"VEP:synonymous_variant","type":"exact"},{"name":"coding-synon","type":"exact"},{"name":"silent mutation","type":"related"},{"name":"silent substitution","type":"related"},{"name":"silent_mutation","type":"related"},{"name":"snpEff:SYNONYMOUS_CODING","type":"exact"},{"name":"synonymous codon","type":"exact"},{"name":"synonymous_coding","type":"exact"},{"name":"synonymous_codon","type":"exact"}],"termid":"SO:0001819"}


id: PBO:0082441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in cell cycle progression; also involved in response to DNA damage; activates Cdc28p to promote the transition from G2 to M phase; accumulates during G2 and M, then targeted via a destruction box motif for ubiquitin-mediated degradation by the proteasome; CLB2 has a paralog, CLB1, that arose from the whole genome duplication","termid":"PBO:0082441"}


id: GO:0018809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: E-phenylitaconyl-CoA + H2O = (hydroxymethylphenyl)succinyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete E-phenylitaconyl-CoA hydratase activity (obsolete GO:0018809)","termid":"GO:0018809"}


id: PBO:0036240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nrd1 complex poly(A) binding protein Nab3 (predicted)","termid":"PBO:0036240"}


id: PBO:0041012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biphenyl hydrolase like","termid":"PBO:0041012"}


id: FYPO:0005063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 4 of histone H3 at the mating type locus occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K4 methylation at mating type locus during vegetative growth","synonyms":[{"name":"increased histone H3 K4 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 methylation at mating type locus during mitotic cell cycle","type":"related"},{"name":"increased histone H3K4 methylation at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone H3K4me at mating type locus during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K4 methylation at mating type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0005063"}


id: PBO:0031491
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_spindle","termid":"PBO:0031491"}


id: GO:0007205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a G protein-coupled receptor binding to its physiological ligand, where the pathway proceeds with activation of protein kinase C (PKC). PKC is activated by second messengers including diacylglycerol (DAG).","definition_xrefs":["GOC:mah","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase C-activating G protein-coupled receptor signaling pathway (obsolete GO:0007205)","synonyms":[{"name":"activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway","type":"related"},{"name":"activation of protein kinase C activity by G-protein coupled receptor protein signalling pathway","type":"related"},{"name":"protein kinase C-activating G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0007205"}


id: PBO:0030001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-P-bodies_present_in_decreased_numbers_during_vegetative_growth","termid":"PBO:0030001"}


id: MONDO:0024245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine carcinoma","termid":"MONDO:0024240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"ductal eccrine adenocarcinoma","secondary_identifiers":["NCIT:C43345","SCTID:403939009","UMLS:C1260964","DOID:5570","MEDGEN:266048"],"synonyms":[{"name":"anaplastic syringoma","type":"exact"},{"name":"ductal eccrine adenocarcinoma","type":"exact"},{"name":"ductal eccrine carcinoma","type":"exact"},{"name":"eccrine ductal carcinoma","type":"exact"},{"name":"eccrine ductal carcinoma (morphologic abnormality)","type":"related"},{"name":"eccrine ductal carcinoma of skin","type":"related"},{"name":"hidradenocarcinoma","type":"related"},{"name":"malignant acrospiroma","type":"exact"},{"name":"malignant hidradenoma","type":"related"},{"name":"primary mucoepidermoid cutaneous carcinoma","type":"related"},{"name":"sweat gland carcinoma of the hand","type":"narrow"}],"termid":"MONDO:0024245","xrefs":{"Monarch":{"xref_id":"0024245"}}}


id: GO:0031552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of brain-derived neurotrophic factor-activated receptor activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of brain-derived neurotrophic factor-activated receptor activity (obsolete GO:0031552)","synonyms":[{"name":"down regulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"down-regulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"downregulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"inhibition of brain-derived neurotrophic factor receptor activity","type":"narrow"},{"name":"negative regulation of BDNF receptor activity","type":"exact"},{"name":"negative regulation of brain-derived neurotrophic factor receptor activity","type":"exact"}],"termid":"GO:0031552"}


id: PBO:0082765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SMC5-SMC6 complex; this complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair","termid":"PBO:0082765"}


id: GO:0016492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the tridecapeptide neurotensin to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state.","definition_xrefs":["PMID:10390649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled neurotensin receptor activity","synonyms":[{"name":"G protein coupled neurotensin receptor activity","type":"exact"},{"name":"G-protein coupled neurotensin receptor activity","type":"exact"},{"name":"neurotensin receptor activity, G protein coupled","type":"exact"},{"name":"neurotensin receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0016492"}


id: GO:0007633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actions or reactions of an individual in response to the orientation of a visual pattern. This is exemplified by some classes of insects which are able to detect and learn the orientation of a set of stripes and subsequently behaviorally discriminate between horizontal, vertical or 45 degree stripes.","definition_xrefs":["PMID:9933535","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual behavior","termid":"GO:0007632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern orientation","synonyms":[{"name":"behavioral response to pattern orientation","type":"exact"},{"name":"behavioural response to pattern orientation","type":"exact"}],"termid":"GO:0007633"}


id: FYPO:0006271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to floxuridine (5-fluoro-2'-deoxyuridine). Cells stop growing (and may die) at a concentration of floxuridine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to floxuridine","synonyms":[{"name":"hypersensitive to floxuridine","type":"exact"},{"name":"sensitive to 5-fluoro-2'-deoxyuridine","type":"exact"},{"name":"sensitive to 5-fluoro-2-deoxyuridine","type":"exact"},{"name":"sensitive to FUDR","type":"exact"},{"name":"sensitive to FdU","type":"exact"},{"name":"sensitive to floxuridin","type":"exact"},{"name":"sensitive to floxuridine during mitotic cell cycle","type":"related"},{"name":"sensitive to floxuridine during vegetative growth","type":"exact"}],"termid":"FYPO:0006271"}


id: MONDO:0016094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that involves the vagina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal cancer","termid":"MONDO:0001402"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal germ cell malignant tumor","secondary_identifiers":["Orphanet:206489","UMLS:C4749402","GARD:20347","MEDGEN:1670250"],"synonyms":[{"name":"malignant germ cell tumor of the vagina","type":"related"},{"name":"malignant germ cell tumour of the vagina","type":"related"},{"name":"vagina malignant germ cell tumor","type":"exact"},{"name":"vagina malignant germ cell tumour","type":"exact"},{"name":"vaginal germ cell cancer","type":"exact"}],"termid":"MONDO:0016094","xrefs":{"Monarch":{"xref_id":"0016094"}}}


id: MONDO:0005428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pemphigus vulgaris (obsolete MONDO:0005428)","termid":"MONDO:0005428","xrefs":{"Monarch":{"xref_id":"0005428"}}}


id: MONDO:0010505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-balding-patella luxation-acromicria syndrome is characterized by severe intellectual deficit, patella luxations, acromicria, hypogonadism, facial dysmorphism (including midface hypoplasia and premature frontotemporal balding). It has been described in three unrelated males.","definition_xrefs":["Orphanet:3041"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-balding-patella luxation-acromicria syndrome","secondary_identifiers":["MEDGEN:401129","GARD:257","SCTID:722002002","MESH:C536638","UMLS:C1866985","OMIM:300977"],"synonyms":[{"name":"SCHOLTE syndrome","type":"related"},{"name":"SHLTS","type":"exact"},{"name":"Scholte syndrome","type":"exact"},{"name":"Scholte-Begeer-van Essen syndrome","type":"exact"},{"name":"early balding, patella luxation, acromicria and hypogonadism","type":"related"},{"name":"early balding, patella luxation, acromicria, and hypogonadism","type":"related"}],"termid":"MONDO:0010505","xrefs":{"Monarch":{"xref_id":"0010505"}}}


id: PBO:0050213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 30","termid":"PBO:0050213"}


id: MONDO:0020974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor-like nodule or mass of inflammatory granulation tissue projecting into the lumen of the LARYNX.","definition_xrefs":["MESH:D006102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal granuloma","secondary_identifiers":["ICD9:478.79","SCTID:72211003","MEDGEN:6674","UMLS:C0018196"],"synonyms":[{"name":"Granuloma of Larynx","type":"related"},{"name":"Granuloma, Laryngeal","type":"related"},{"name":"Granulomas, Laryngeal","type":"related"},{"name":"Laryngeal Granuloma","type":"related"},{"name":"Laryngeal Granulomas","type":"related"},{"name":"Laryngeal granuloma","type":"related"},{"name":"Larynx Granuloma","type":"related"},{"name":"Larynx Granulomas","type":"related"},{"name":"laryngeal granuloma","type":"exact"}],"termid":"MONDO:0020974","xrefs":{"Monarch":{"xref_id":"0020974"}}}


id: GO:0070200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the telomeric region of a chromosome.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome, telomeric region","termid":"GO:0070198"},{"relation_name":"is_a","term_name":"establishment of protein localization to chromosome","termid":"GO:0070199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to telomere","synonyms":[{"name":"establishment of protein localisation to telomere","type":"exact"},{"name":"establishment of protein localization to chromosome, telomeric region","type":"exact"}],"termid":"GO:0070200"}


id: GO:0043179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the generation of rhythmic, synchronous excitatory synaptic inputs in a neural circuit.","definition_xrefs":["GOC:go_curators","ISBN:0195088433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythmic synaptic transmission","termid":"GO:0060024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"rhythmic excitation","termid":"GO:0043179"}


id: PBO:0042616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol synthase 2","termid":"PBO:0042616"}


id: PBO:0059266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L32","termid":"PBO:0059266"}


id: PBO:0113484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Third subunit of DNA polymerase delta; involved in chromosomal DNA replication; required for error-prone DNA synthesis in the presence of DNA damage and processivity; parental H3-H4 histone chaperone that mediates transfer of parental histones to the lagging strand via Pol1p during DNA replication; forms a complex with Rev3p, Rev7p and Pol31p; interacts with Hys2p, PCNA (Pol30p), and Pol1p","termid":"PBO:0113484"}


id: PBO:0052254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDEL endoplasmic reticulum protein retention receptor 1","termid":"PBO:0052254"}


id: PBO:0063194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 7","termid":"PBO:0063194"}


id: GO:0060942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neural crest cell acquires the specialized structural and/or functional features of a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac fibroblast cell differentiation","termid":"GO:0060942"}


id: GO:0061394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance (obsolete GO:0061394)","termid":"GO:0061394"}


id: MONDO:0005099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intracranial hemorrhage into the subarachnoid space.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subarachnoid hemorrhage","secondary_identifiers":["HP:0002138","ICD9:430","MEDGEN:11625","MESH:D013345","SCTID:21454007","UMLS:C0038525","EFO:0000713"],"synonyms":[{"name":"subarachnoid haemorrhage (disease)","type":"exact"},{"name":"subarachnoid hemorrhage","type":"exact"},{"name":"subarachnoid hemorrhage (disease)","type":"exact"}],"termid":"MONDO:0005099","xrefs":{"Monarch":{"xref_id":"0005099"}}}


id: GO:0042959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an alkanesulfonate from one side of a membrane to the other according to the reaction: ATP + H2O + alkanesulfonate(out) = ADP + phosphate + alkanesulfonate(in).","definition_xrefs":["PMID:10506196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"ATPase-coupled organic acid transmembrane transporter activity","termid":"GO:0033283"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type alkanesulfonate transporter transporter activity","synonyms":[{"name":"alkanesulfonate transmembrane transporter activity","type":"broad"},{"name":"alkanesulfonate transporter activity","type":"related"},{"name":"alkanesulphonate transporter activity","type":"exact"}],"termid":"GO:0042959"}


id: PR:Q9Y802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsd1 gene.","definition_xrefs":["UniProtKB:Q9Y802","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine-specific histone demethylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.09c","synonyms":[{"name":"Spom972h-lsd1","type":"exact"}],"termid":"PR:Q9Y802"}


id: FYPO:0005589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular phosphatidylserine level","synonyms":[{"name":"normal cellular PS level","type":"exact"},{"name":"normal cellular phosphatidylserine accumulation","type":"related"},{"name":"normal cellular phosphatidylserine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylserine level during vegetative growth","type":"exact"}],"termid":"FYPO:0005589"}


id: GO:1902646
data:
  {"annotated_genes":["SJAG_03170","SJAG_00053","SJAG_02613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104172,90202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[117329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process.","definition_xrefs":["GOC:di","GO_REF:0000058","PMID:22562153","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol biosynthetic process","termid":"GO:0010511"},{"relation_name":"regulates","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","termid":"GO:1902635"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_02613":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate anabolism","type":"exact"},{"name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthesis","type":"exact"},{"name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate formation","type":"exact"},{"name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate synthesis","type":"exact"}],"termid":"GO:1902646","terms_by_termid":{"GO:1902647":null,"GO:1902648":null}}


id: PBO:0076587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 9B","termid":"PBO:0076587"}


id: MONDO:0957018
data:
  {"annotated_genes":["SJAG_02039","SJAG_04541","SJAG_04569","SJAG_03805","SJAG_03151","SJAG_05239","SJAG_00400","SJAG_04290","SJAG_04380","SJAG_04118","SJAG_01884","SJAG_04969"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[84975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[84978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[85064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[87072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014629"},{"annotations":[86544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054698"},{"annotations":[86355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054700"},{"annotations":[85228,85227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054699"},{"annotations":[86229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[86080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"},{"annotations":[85446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010523"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_03151":null,"SJAG_03805":null,"SJAG_04118":null,"SJAG_04290":null,"SJAG_04380":null,"SJAG_04541":null,"SJAG_04569":null,"SJAG_04969":null,"SJAG_05239":null},"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory syndrome of childhood","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21427","Orphanet:319719","MEDGEN:1842803","UMLS:C5680962"],"termid":"MONDO:0957018","terms_by_termid":{"MONDO:0010523":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0013818":null,"MONDO:0014007":null,"MONDO:0014629":null,"MONDO:0024541":null,"MONDO:0054698":null,"MONDO:0054699":null,"MONDO:0054700":null},"xrefs":{"Monarch":{"xref_id":"0957018"}}}


id: GO:0102164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-heptyl-4-quinolone + NADH + O2 + H+ = 2-heptyl-3-hydroxy-4-quinolone + NAD + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-heptyl-3-hydroxy-4(1H)-quinolone synthase activity","secondary_identifiers":["RHEA:37871","MetaCyc:RXN-11849"],"termid":"GO:0102164"}


id: PBO:0073260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 4","termid":"PBO:0073260"}


id: GO:0009716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavonoid phytoalexins, a group of water-soluble phenolic derivatives containing a flavan skeleton, which possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"flavonoid phytoalexin metabolic process","termid":"GO:0046285"},{"relation_name":"is_a","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"flavonoid phytoalexin biosynthetic process","synonyms":[{"name":"flavonoid phytoalexin anabolism","type":"exact"},{"name":"flavonoid phytoalexin biosynthesis","type":"exact"},{"name":"flavonoid phytoalexin formation","type":"exact"},{"name":"flavonoid phytoalexin synthesis","type":"exact"}],"termid":"GO:0009716"}


id: PBO:0089527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase Zwf1","termid":"PBO:0089527"}


id: PBO:0059375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21","termid":"PBO:0059375"}


id: GO:0061194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the taste bud are generated and organized. The taste bud is a specialized area of the tongue that contains taste receptors.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"tongue morphogenesis","termid":"GO:0043587"},{"relation_name":"part_of","term_name":"taste bud development","termid":"GO:0061193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taste bud morphogenesis","termid":"GO:0061194"}


id: PBO:0067910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 212","termid":"PBO:0067910"}


id: GO:0008035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to high-density lipoprotein particle, a lipoprotein particle with a high density (typically 1.063-1.21 g/ml) and a diameter of 5-10 nm that contains APOAs and may contain APOCs and APOE.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle binding","termid":"GO:0071813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"high-density lipoprotein particle binding","synonyms":[{"name":"HDL binding","type":"exact"}],"termid":"GO:0008035"}


id: GO:1901387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated calcium channel activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transporter activity","termid":"GO:1901021"},{"relation_name":"is_a","term_name":"regulation of voltage-gated calcium channel activity","termid":"GO:1901385"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of voltage-gated calcium channel activity","synonyms":[{"name":"activation of depolarization-activated calcium channel","type":"broad"},{"name":"activation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"activation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"activation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"activation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"activation of voltage gated calcium channel activity","type":"exact"},{"name":"activation of voltage-dependent calcium channel activity","type":"exact"},{"name":"activation of voltage-gated calcium channel activity","type":"narrow"},{"name":"activation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"activation of voltage-sensitive calcium channel","type":"exact"},{"name":"positive regulation of depolarization-activated calcium channel","type":"broad"},{"name":"positive regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"positive regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"positive regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"positive regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"positive regulation of voltage gated calcium channel activity","type":"exact"},{"name":"positive regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"positive regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"positive regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"up regulation of depolarization-activated calcium channel","type":"broad"},{"name":"up regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"up regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"up regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"up regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"up regulation of voltage gated calcium channel activity","type":"exact"},{"name":"up regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"up regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"up regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"up regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"up-regulation of depolarization-activated calcium channel","type":"broad"},{"name":"up-regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"up-regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"up-regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"up-regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"up-regulation of voltage gated calcium channel activity","type":"exact"},{"name":"up-regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"up-regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"upregulation of depolarization-activated calcium channel","type":"broad"},{"name":"upregulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"upregulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"upregulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"upregulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"upregulation of voltage gated calcium channel activity","type":"exact"},{"name":"upregulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"upregulation of voltage-gated calcium channel activity","type":"exact"},{"name":"upregulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"upregulation of voltage-sensitive calcium channel","type":"exact"}],"termid":"GO:1901387"}


id: GO:0070698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type I activin receptor.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin receptor binding","termid":"GO:0070697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type I activin receptor binding","termid":"GO:0070698"}


id: PBO:0028811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0028811"}


id: PBO:0039994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 8B","termid":"PBO:0039994"}


id: PBO:0108989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilizer of axonemal microtubules 5","termid":"PBO:0108989"}


id: MONDO:0007977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesomelic dysplasia Kantaputra type (MDK) is a rare skeletal disease characterized by symmetric shortening of the middle segments of limbs and short stature.","definition_xrefs":["Orphanet:1836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"mesomelic dysplasia","termid":"MONDO:0023599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mesomelic dysplasia, Kantaputra type","secondary_identifiers":["GARD:3074","MEDGEN:331880","MESH:C535547","OMIM:156232","SCTID:719397009","UMLS:C1835009"],"synonyms":[{"name":"Kantaputra mesomelic dysplasia","type":"exact"},{"name":"MDK","type":"exact"},{"name":"MMDK","type":"related"},{"name":"Mdk","type":"related"},{"name":"mesomelic dysplasia Kantaputra type","type":"related"},{"name":"mesomelic dysplasia Thai type","type":"related"},{"name":"mesomelic dysplasia with ankle carpal and tarsal synostosis","type":"related"},{"name":"mesomelic dysplasia with ankle, carpal, and tarsal synostosis","type":"related"},{"name":"mesomelic dysplasia, Kantaputra type","type":"exact"},{"name":"mesomelic dysplasia, Thai type","type":"exact"}],"termid":"MONDO:0007977","xrefs":{"Monarch":{"xref_id":"0007977"}}}


id: MONDO:0858921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small cell sarcoma that is characterized by the absence of EWSR1 rearrangement and the presence of small round malignant cells with a small amount of cytoplasm.","definition_xrefs":["DOID:0081249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell sarcoma","termid":"MONDO:0006974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"EWSR1-negative small round cell tumor","secondary_identifiers":["UMLS:C5237359","NCIT:C165671","MEDGEN:1714743"],"termid":"MONDO:0858921","xrefs":{"Monarch":{"xref_id":"0858921"}}}


id: PBO:0044537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DALR anticodon binding domain containing 3","termid":"PBO:0044537"}


id: PBO:0088072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease component of the SAGA acetylation complex; required for SAGA (Spt-Ada-Gcn5-Acetyltransferase)-mediated deubiquitination of histone H2B","termid":"PBO:0088072"}


id: GO:0180010
data:
  {"annotated_genes":["SJAG_02037","SJAG_00961","SJAG_01175","SJAG_03126","SJAG_01791","SJAG_04022","SJAG_02551","SJAG_00527","SJAG_04942","SJAG_03624","SJAG_02720","SJAG_03594","SJAG_04587","SJAG_00435","SJAG_02668","SJAG_03500","SJAG_01412","SJAG_03233","SJAG_02865","SJAG_03226","SJAG_03853","SJAG_01599"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67428,87424,88176,90416,92621,92730,93243,93265,96981,97935,98894,100102,104500,104538,104790,109611,111093,111365,111751,113362,115088,118016],"is_not":false,"summary":null,"term":"GO:0180010"}]},"cv_name":"biological_process","definition":"Any process involved in transcription termination-coupled 3' processing of RNA polymerase II mRNA transcripts by the 3' end cleavage and addition of a poly(A) tail.","definition_xrefs":["PMID:31499460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"},{"relation_name":"is_a","term_name":"co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway","termid":"GO:0180012"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00435":null,"SJAG_00527":null,"SJAG_00961":null,"SJAG_01175":null,"SJAG_01412":null,"SJAG_01599":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_02551":null,"SJAG_02668":null,"SJAG_02720":null,"SJAG_02865":null,"SJAG_03126":null,"SJAG_03226":null,"SJAG_03233":null,"SJAG_03500":null,"SJAG_03594":null,"SJAG_03624":null,"SJAG_03853":null,"SJAG_04022":null,"SJAG_04587":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"cotranscriptional 3' processing of RNA polymerase II mRNA transcripts","type":"exact"},{"name":"mRNA polyadenylation","type":"related"}],"termid":"GO:0180010","terms_by_termid":{"GO:0180010":null}}


id: GO:0005723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, compact region of heterochromatin located in the middle of the polytene chromosome chromocenter, which undergoes little or no replication during polytenization.","definition_xrefs":["PMID:8878678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericentric heterochromatin","termid":"GO:0005721"},{"relation_name":"part_of","term_name":"polytene chromosome chromocenter","termid":"GO:0005701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"alpha-heterochromatin","termid":"GO:0005723"}


id: PBO:0048340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 51","termid":"PBO:0048340"}


id: PBO:0001002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine transporter Thi9","termid":"PBO:0001002"}


id: GO:0016662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","secondary_identifiers":["EC:1.7.2.-"],"termid":"GO:0016662"}


id: PBO:0029722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytoplasmic_microtubules","termid":"PBO:0029722"}


id: FYPO:0007151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form actin cables that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable morphology","termid":"FYPO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"long actin cables","synonyms":[{"name":"elongated actin cables","type":"exact"},{"name":"increased actin cable length","type":"exact"},{"name":"long actin cables during mitotic cell cycle","type":"related"},{"name":"long actin cables during vegetative growth","type":"exact"},{"name":"long formin-nucleated actin cables","type":"exact"}],"termid":"FYPO:0007151"}


id: PBO:0040208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL transcriptional regulator 1","termid":"PBO:0040208"}


id: GO:1901165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of trophoblast cell migration.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of trophoblast cell migration","termid":"GO:1901163"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"trophoblast cell migration","termid":"GO:0061450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of trophoblast cell migration","synonyms":[{"name":"activation of trophoblast cell migration","type":"narrow"},{"name":"up regulation of trophoblast cell migration","type":"exact"},{"name":"up-regulation of trophoblast cell migration","type":"exact"},{"name":"upregulation of trophoblast cell migration","type":"exact"}],"termid":"GO:1901165"}


id: PBO:0073511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 4B","termid":"PBO:0073511"}


id: GO:0102059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 isopentenyl diphosphate + dimethylallyl diphosphate = (2Z,6Z)-farnesyl diphosphate + 2 diphosphate.","definition_xrefs":["RHEA:27810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"(2Z,6Z)-farnesyl diphosphate synthase activity","secondary_identifiers":["GO:0102192","EC:2.5.1.92","MetaCyc:RXN-10481"],"synonyms":[{"name":"2-cis,6-cis-farnesyl pyrophosphate synthase activity","type":"exact"},{"name":"Z,Z-FPP synthase activity","type":"exact"},{"name":"Z,Z-farnesyl pyrophosphate synthase activity","type":"exact"},{"name":"cis,cis-farnesyl diphosphate synthase activity","type":"exact"},{"name":"neryl-diphosphate:isopentenyl-diphosphate cistransferase activity","type":"narrow"},{"name":"zFPS activity","type":"exact"}],"termid":"GO:0102059"}


id: PBO:0035940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_methyltransferase_activity","termid":"PBO:0035940"}


id: PBO:0056921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misshapen like kinase 1","termid":"PBO:0056921"}


id: GO:0048101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: nucleoside 3',5'-cyclic GMP + H2O = GMP + H+; this activity is activated by binding to calcium-bound calmodulin.","definition_xrefs":["PMID:35216259","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-GMP phosphodiesterase activity","termid":"GO:0047555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"calmodulin-activated 3',5'-cyclic-GMP phosphodiesterase activity","synonyms":[{"name":"calcium- and calmodulin-regulated 3',5'-cyclic-GMP phosphodiesterase activity","type":"broad"},{"name":"calcium- and calmodulin-regulated cGMP phosphodiesterase activity","type":"related"},{"name":"calcium- and calmodulin-regulated cGMP-specific phosphodiesterase activity","type":"exact"},{"name":"calcium- and calmodulin-regulated cyclic-GMP phosphodiesterase activity","type":"exact"},{"name":"calcium/calmodulin-regulated cGMP-specific phosphodiesterase activity","type":"exact"}],"termid":"GO:0048101"}


id: PBO:0030510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_protease_inhibitor","termid":"PBO:0030510"}


id: PBO:0034381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_synthesis_of","termid":"PBO:0034381"}


id: PBO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.20","termid":"PBO:0001800"}


id: PBO:0044443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 12","termid":"PBO:0044443"}


id: PBO:0067546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 692, pseudogene","termid":"PBO:0067546"}


id: FYECO:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition specifying the temperature at which the experiment was performed.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000002 temperature (obsolete FYECO:0000002)","termid":"FYECO:0000002"}


id: PR:000035574
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A MAD2:MAD3 complex whose components are encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:12676091","PRO:KER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAD2:MAD3 complex (Schizosaccharomyces pombe 972h-)","synonyms":[{"name":"Spom972h-(MAD2:MAD3)","type":"exact"}],"termid":"PR:000035574"}


id: GO:0015891
data:
  {"annotated_genes":["SJAG_02735","SJAG_03667","SJAG_02834"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61837,61946,68972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"}]},"cv_name":"biological_process","definition":"The directed movement of siderophores, low molecular weight Fe(III)-chelating substances, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron coordination entity transport","termid":"GO:1901678"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null,"SJAG_03667":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"siderophore transport","references_by_uniquename":{"GO_REF:0000108":null},"secondary_identifiers":["GO:0015892"],"synonyms":[{"name":"iron-siderochrome transport","type":"narrow"},{"name":"iron-siderophore transport","type":"exact"},{"name":"siderochrome transport","type":"narrow"},{"name":"siderophore-iron transport","type":"exact"}],"termid":"GO:0015891","terms_by_termid":{"GO:0044718":null}}


id: FYPO:0002791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more, but smaller, vacuoles than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small vacuoles during stationary phase","termid":"FYPO:0002789"},{"relation_name":"has_part","term_name":"lipid droplets present in spore cytoplasm in decreased numbers, mislocalized to ascus epiplasm","termid":"FYPO:0006053"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"},{"relation_name":"is_a","term_name":"small vacuoles during stationary phase","termid":"FYPO:0002789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during stationary phase","synonyms":[{"name":"fragmented vacuoles during stationary phase","type":"related"},{"name":"small vacuoles present in greater numbers during stationary phase","type":"exact"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during stationary phase","type":"exact"}],"termid":"FYPO:0002791"}


id: GO:1905250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of memory.","definition_xrefs":["GO_REF:0000058","PMID:25905804","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of memory (obsolete GO:1905250)","synonyms":[{"name":"enhancement of memory","type":"narrow"}],"termid":"GO:1905250"}


id: PBO:0066829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 128","termid":"PBO:0066829"}


id: PBO:0079370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 4","termid":"PBO:0079370"}


id: PATO:0000103
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000103 micronutrient sensitivity (obsolete PATO:0000103)","termid":"PATO:0000103"}


id: MOD:01874
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-carboxy-L-valine.","definition_xrefs":["PubMed:4647257","PubMed:4593770","PubMed:18688235","PubMed:8312270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carboxy-L-valine","synonyms":[{"name":"(S)-2-carboxyamino-propanoic acid","type":"exact"},{"name":"2-carbamic-propanoic acid","type":"exact"},{"name":"N-carboxymethionine","type":"exact"}],"termid":"MOD:01874"}


id: MONDO:0859169
data:
  {"annotated_genes":["SJAG_03454"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86136],"is_not":false,"summary":null,"term":"MONDO:0859169"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03454":null},"genotype_count":0,"is_obsolete":false,"name":"White-Kernohan syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619426","UMLS:C5543635","MEDGEN:1785087"],"termid":"MONDO:0859169","terms_by_termid":{"MONDO:0859169":null},"xrefs":{"Monarch":{"xref_id":"0859169"}}}


id: MONDO:0012137
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86115,86116],"is_not":false,"summary":null,"term":"MONDO:0012137"}]},"cv_name":"mondo","definition":"Carney complex-trismus-pseudocamptodactyly syndrome is a rare genetic heart-hand syndrome characterized by typical manifestations of the Carney complex (spotty pigmentation of the skin, familial cardiac and cutaneous myxomas and endocrinopathy) associated with trismus and distal arthrogryposis (presenting as involuntary contraction of distal and proximal interphalangeal joints of hands evident only on dorsiflexion of wrist and similar lower-limb contractures producing foot deformities).","definition_xrefs":["Orphanet:319340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Carney complex","termid":"MONDO:0015285"},{"relation_name":"is_a","term_name":"heart-hand syndrome","termid":"MONDO:0016432"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"Carney complex - trismus - pseudocamptodactyly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1837245","MEDGEN:332400","OMIM:608837","GARD:17448"],"synonyms":[{"name":"CARNEY complex variant","type":"related"},{"name":"Carney complex variant","type":"exact"}],"termid":"MONDO:0012137","terms_by_termid":{"MONDO:0012137":null},"xrefs":{"Monarch":{"xref_id":"0012137"}}}


id: GO:2001015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle cell differentiation","termid":"GO:2001014"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle cell differentiation","termid":"GO:0035914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle cell differentiation","termid":"GO:2001015"}


id: GO:0110126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of loading solutes into the sieve tube or companion cell of the phloem for long distance transport from source to sink.","definition_xrefs":["GOC:lr","PMID:19025382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phloem transport","termid":"GO:0010233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"phloem loading","termid":"GO:0110126"}


id: MONDO:0100532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharospasm, benign essential, susceptibility to","secondary_identifiers":["MEDGEN:1640286","OMIM:606798","UMLS:C4692845"],"termid":"MONDO:0100532","xrefs":{"Monarch":{"xref_id":"0100532"}}}


id: PBO:0053680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 867","termid":"PBO:0053680"}


id: GO:0047606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (S)-hydroxynitrile = hydrogen cyanide + an aldehyde or ketone.","definition_xrefs":["PMID:3377504","EC:4.1.2.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"(S)-hydroxynitrile lyase activity","secondary_identifiers":["GO:0046991"],"synonyms":[{"name":"alpha-hydroxynitrile lyase activity","type":"narrow"},{"name":"hydroxynitrilase activity","type":"broad"},{"name":"hydroxynitrile lyase activity","type":"exact"},{"name":"oxynitrilase activity","type":"related"}],"termid":"GO:0047606"}


id: PBO:0085504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; has an extraribosomal function in regulation of RPS28B, in which Rps28Ap binds to a decapping complex via Edc3p, which then binds to RPS28B mRNA leading to its decapping and degradation; homologous to mammalian ribosomal protein S28, no bacterial homolog; RPS28A has a paralog, RPS28B, that arose from the whole genome duplication","termid":"PBO:0085504"}


id: PBO:0056159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MACROD2 intronic transcript 1","termid":"PBO:0056159"}


id: MONDO:0020339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked complex spastic paraplegia (obsolete MONDO:0020339)","secondary_identifiers":["Orphanet:98888"],"synonyms":[{"name":"Complex X-linked HSP","type":"exact"},{"name":"Complex X-linked SPG","type":"exact"},{"name":"X-linked complicated spastic paraplegia","type":"exact"},{"name":"complicated X-linked HSP","type":"exact"},{"name":"complicated X-linked SPG","type":"exact"}],"termid":"MONDO:0020339","xrefs":{"Monarch":{"xref_id":"0020339"}}}


id: GO:0060706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of the embryonic placenta.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"embryonic placenta development","termid":"GO:0001892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"}


id: GO:0062119
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that associates with chromatin to form linear elements in fission yeast. In S. pombe, the LinE complex contains four main structural components (Rec10, Rec25, Rec27, and Mug20) and other associated proteins.","definition_xrefs":["PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"LinE complex","termid":"GO:0062119"}


id: PBO:0045523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrobrevin binding protein 1","termid":"PBO:0045523"}


id: GO:0097544
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The mid part of a cilium between the ciliary base and ciliary tip that extends into the extracellular space.","definition_xrefs":["GOC:cilia","PMID:19866682","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary shaft","synonyms":[{"name":"cilial shaft","type":"exact"},{"name":"cilium shaft","type":"exact"},{"name":"flagellar shaft","type":"exact"},{"name":"flagellum shaft","type":"exact"}],"termid":"GO:0097544"}


id: PBO:0084900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial transporter repressible by thiamine; THI74 has a paralog, YML018C, that arose from the whole genome duplication; shows sequence homology to human gene SLC35F3, a thiamine transporter implicated in hypertension","termid":"PBO:0084900"}


id: MONDO:0010246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Female restricted epilepsy with intellectual disability is a rare X-linked epilepsy syndrome characterized by febrile or afebrile seizures (mainly tonic-clonic, but also absence, myoclonic, and atonic) starting in the first years of life and, in most cases, developmental delay and intellectual disability of variable severity. Behavioral disturbances (e.g. autistic features, hyperactivity, and aggressiveness) are also frequently associated. This disease affects exclusively females, with male carriers being unaffected, despite an X-linked inheritance.","definition_xrefs":["Orphanet:101039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked intellectual disability-epilepsy syndrome","termid":"MONDO:0016160"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"},{"relation_name":"is_a","term_name":"X-linked complex neurodevelopmental disorder","termid":"MONDO:0100148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 9","secondary_identifiers":["MEDGEN:338393","DOID:0060848","MESH:C564715","GARD:10806","NANDO:1200599","OMIM:300088","UMLS:C1848137"],"synonyms":[{"name":"DEE9","type":"exact"},{"name":"EFMR","type":"exact"},{"name":"EIEE9","type":"exact"},{"name":"Juberg Hellman syndrome","type":"exact"},{"name":"Juberg-Hellman syndrome","type":"exact"},{"name":"PCDH19 early infantile epileptic encephalopathy","type":"exact"},{"name":"PCDH19-related FLE","type":"related"},{"name":"PCDH19-related female-limited epilepsy","type":"related"},{"name":"PCDH19-related infantile epileptic encephalopathy","type":"related"},{"name":"developmental and epileptic encephalopathy 9","type":"exact"},{"name":"developmental and epileptic encephalopathy, 9","type":"exact"},{"name":"early infantile epileptic encephalopathy 9","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in PCDH19","type":"exact"},{"name":"early infantile epileptic encephalopathy type 9","type":"exact"},{"name":"early infantile female-limited epilecptic encephalopathy","type":"exact"},{"name":"epilepsy and intellectual disability limited to females","type":"related"},{"name":"epilepsy and mental retardation limited to females","type":"related"},{"name":"epilepsy, female restricted, with intellectual disability","type":"related"},{"name":"epilepsy, female restricted, with mental retardation","type":"related"},{"name":"epilepsy, female-restricted, with intellectual disability","type":"related"},{"name":"epilepsy, female-restricted, with mental retardation","type":"related"},{"name":"epileptic encephalopathy, early infantile, 9","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 9","type":"exact"},{"name":"familial epilepsy and intellectual disability limited to females","type":"exact"},{"name":"familial epilepsy and mental retardation limited to females","type":"exact"},{"name":"female restricted epilepsy with intellectual deficit","type":"related"},{"name":"female restricted epilepsy with intellectual disability","type":"exact"},{"name":"female restricted epilepsy with mental retardation","type":"exact"}],"termid":"MONDO:0010246","xrefs":{"Monarch":{"xref_id":"0010246"}}}


id: GO:0002040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of new blood vessels from existing vessels into avascular tissues, this process includes the specialization of endothelial cells into leading tip and stalk cells, proliferation and migration of the endothelial cells and cell adhesion resulting in angiogenic sprout fusion or lumen formation.","definition_xrefs":["PMID:16391003","PMID:23031691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sprouting angiogenesis","termid":"GO:0002040"}


id: PBO:0000838
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.7.1","termid":"PBO:0000838"}


id: GO:0034755
data:
  {"annotated_genes":["SJAG_04260","SJAG_02735","SJAG_02968","SJAG_01007","SJAG_04675","SJAG_02457","SJAG_04737","SJAG_04867","SJAG_03667","SJAG_02473","SJAG_02834"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61335,75412,77698],"is_not":false,"summary":null,"term":"GO:0034755"},{"annotations":[97878,113580,69941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[113003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[89062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[68972,61837,61946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"}]},"cv_name":"biological_process","definition":"A process in which an iron ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","PMID:11390404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transport","termid":"GO:0006826"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_02457":null,"SJAG_02473":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_02968":null,"SJAG_03667":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04737":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"iron ion transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0061839","GO:0006827","GO:0000040","GO:1903874"],"synonyms":[{"name":"ferrous ion transmembrane transport","type":"narrow"},{"name":"ferrous iron transmembrane transport","type":"narrow"},{"name":"high affinity ferrous ion transmembrane transport","type":"narrow"},{"name":"high affinity iron ion transport","type":"narrow"},{"name":"high-affinity ferrous ion transmembrane transport","type":"narrow"},{"name":"high-affinity iron ion transmembrane transport","type":"narrow"},{"name":"high-affinity iron ion transport","type":"narrow"},{"name":"iron ion membrane transport","type":"exact"},{"name":"iron(2+) transmembrane transport","type":"narrow"},{"name":"low affinity iron ion transport","type":"narrow"},{"name":"low-affinity iron ion transmembrane transport","type":"narrow"},{"name":"low-affinity iron ion transport","type":"narrow"},{"name":"transmembrane iron transport","type":"exact"}],"termid":"GO:0034755","terms_by_termid":{"GO:0034755":null,"GO:0044718":null,"GO:0048250":null,"GO:0098711":null,"GO:0140466":null}}


id: PBO:0050344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 46","termid":"PBO:0050344"}


id: PBO:0060982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGFR antisense RNA 1","termid":"PBO:0060982"}


id: PBO:0030133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_zinc_level","termid":"PBO:0030133"}


id: PBO:0081266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 33A","termid":"PBO:0081266"}


id: MONDO:0016448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudoxanthoma elasticum-like papillary dermal elastolysis (PXE-PDE) is a rare, acquired, idiopathic dermal tissue disorder characterized by numerous, asymptomatic, 2-3 mm, yellowish, non-follicular papules that tend to converge into cobblestone-like plaques which are distributed symmetrically over the posterior neck, supraclavicular region, axillae, and sometimes abdomen. Unlike PXE, these skin lesions show select elimination (absence or marked loss) of elastic fibers in the papillary dermis and there is no systemic involvement.","definition_xrefs":["Orphanet:228293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pseudoxanthoma elasticum-like papillary dermal elastolysis","secondary_identifiers":["SCTID:764105002","icd11.foundation:704601885","GARD:20588","MEDGEN:1638395","UMLS:C4049455"],"synonyms":[{"name":"PXE-PDE","type":"exact"},{"name":"PXE-like papillary dermal elastolysis","type":"exact"}],"termid":"MONDO:0016448","xrefs":{"Monarch":{"xref_id":"0016448"}}}


id: PBO:0077086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 1","termid":"PBO:0077086"}


id: GO:0005432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in).","definition_xrefs":["GOC:curators","PMID:16371597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"calcium:monoatomic cation antiporter activity","termid":"GO:0015368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"calcium:sodium antiporter activity","secondary_identifiers":["Reactome:R-HSA-425661","Reactome:R-HSA-8949688","Reactome:R-HSA-8949703","RHEA:29255"],"synonyms":[{"name":"mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"sodium/calcium exchanger","type":"exact"},{"name":"sodium:calcium exchange","type":"related"}],"termid":"GO:0005432"}


id: PBO:0079348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tweety family member 1","termid":"PBO:0079348"}


id: PBO:0027110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-narrow_cell_fusion_site_following_conjugation_with_cellular_fusion","termid":"PBO:0027110"}


id: GO:0019024
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome composed of single stranded RNA of either positive or negative sense.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete ssRNA viral genome (obsolete GO:0019024)","termid":"GO:0019024"}


id: PBO:0087880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator of a variety of genes; phosphorylation by protein kinase A stimulates Opi1p function in negative regulation of phospholipid biosynthetic genes; involved in telomere maintenance; null exhibits disrupted mitochondrial metabolism and low cardiolipin content, strongly correlated with overproduction of inositol; binds to phosphatidic acid","termid":"PBO:0087880"}


id: MONDO:0021112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the scrotum.","definition_xrefs":["NCIT:C3560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scrotum neoplasm","termid":"MONDO:0003319"},{"relation_name":"is_a","term_name":"male reproductive organ cancer","termid":"MONDO:0005836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"scrotum cancer","secondary_identifiers":["MEDGEN:57564","UMLS:C0153604","SCTID:363454002","ICD9:187.7"],"synonyms":[{"name":"cancer of scrotum","type":"exact"},{"name":"malignant neoplasm of scrotum","type":"exact"},{"name":"malignant neoplasm of the scrotum","type":"exact"},{"name":"malignant scrotal neoplasm","type":"exact"},{"name":"malignant scrotal tumor","type":"exact"},{"name":"malignant scrotal tumour","type":"exact"},{"name":"malignant scrotum neoplasm","type":"exact"},{"name":"malignant tumor of scrotum","type":"exact"},{"name":"malignant tumor of the scrotum","type":"exact"},{"name":"malignant tumour of scrotum","type":"exact"},{"name":"malignant tumour of the scrotum","type":"exact"},{"name":"scrotum cancer","type":"exact"}],"termid":"MONDO:0021112","xrefs":{"Monarch":{"xref_id":"0021112"}}}


id: GO:0050418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NH3 + H2O + acceptor = hydroxylamine + reduced acceptor.","definition_xrefs":["EC:1.7.99.1","MetaCyc:HYDROXYLAMINE-REDUCTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hydroxylamine reductase activity","secondary_identifiers":["RHEA:22052"],"synonyms":[{"name":"ammonia:(acceptor) oxidoreductase activity","type":"related"},{"name":"ammonia:acceptor oxidoreductase activity","type":"related"},{"name":"hydroxylamine (acceptor) reductase activity","type":"related"}],"termid":"GO:0050418"}


id: GO:0034955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxydiphenyl ether + O2 + H2O = 2-hydroxymuconate + phenol.","definition_xrefs":["UM-BBD_reactionID:r1451"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-dihydroxydiphenyl ether dioxygenase activity (obsolete GO:0034955)","termid":"GO:0034955"}


id: PBO:0052751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 43","termid":"PBO:0052751"}


id: GO:0062074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An area where exine is reduced or absent, in the pollen wall.","definition_xrefs":["PMID:30150313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pollen wall","termid":"GO:0043667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pollen aperture","termid":"GO:0062074"}


id: GO:0045919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytolysis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytolysis","termid":"GO:0042268"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cytolysis","termid":"GO:0019835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytolysis","synonyms":[{"name":"activation of cytolysis","type":"narrow"},{"name":"stimulation of cytolysis","type":"narrow"},{"name":"up regulation of cytolysis","type":"exact"},{"name":"up-regulation of cytolysis","type":"exact"},{"name":"upregulation of cytolysis","type":"exact"}],"termid":"GO:0045919"}


id: MONDO:0010170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Usher syndrome in which the cause of the disease is a mutation in the CLRN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome type 3","termid":"MONDO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 3A","secondary_identifiers":["GARD:15242","UMLS:C5779850","ICD10CM:H35.5","OMIM:276902","MEDGEN:1830415","DOID:0110841"],"synonyms":[{"name":"CLRN1 Usher syndrome","type":"exact"},{"name":"USH3A","type":"exact"},{"name":"USHER syndrome, type IIIA","type":"related"},{"name":"Usher syndrome caused by mutation in CLRN1","type":"exact"},{"name":"Usher syndrome type 3A","type":"exact"},{"name":"Usher syndrome type IIIA","type":"exact"},{"name":"Usher syndrome, type 3","type":"related"},{"name":"Usher syndrome, type 3A","type":"related"}],"termid":"MONDO:0010170","xrefs":{"Monarch":{"xref_id":"0010170"}}}


id: MONDO:0003129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-encapsulated, well defined pulmonary blastoma, composed of irregular tubular structures. It affects mostly middle-aged adults and it is rare in children. The prognosis is better compared to the biphasic pulmonary blastoma.","definition_xrefs":["NCIT:C36053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary blastoma","termid":"MONDO:0005933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epithelial predominant pulmonary blastoma","secondary_identifiers":["MEDGEN:234222","DOID:4768","UMLS:C1333420"],"synonyms":[{"name":"epithelial predominant pulmonary blastoma","type":"exact"}],"termid":"MONDO:0003129","xrefs":{"Monarch":{"xref_id":"0003129"}}}


id: PBO:0090259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable element related protein","termid":"PBO:0090259"}


id: MONDO:0007079
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87115],"is_not":false,"summary":null,"term":"MONDO:0007079"}]},"cv_name":"mondo","definition":"Physical and psychological dependence on alcohol.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drug dependence","termid":"MONDO:0005303"},{"relation_name":"is_a","term_name":"alcohol-related disorders","termid":"MONDO:0021698"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"is_obsolete":false,"name":"alcohol dependence","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0001973","ICD9:303.90","icd11.foundation:1580466198","NCIT:C93040","ICD9:305.0","MEDGEN:1801","DOID:0050741","MESH:D000437","MESH:D010610","MESH:D019973","NCIT:C3325","OMIM:103780","SCTID:66590003"],"synonyms":[{"name":"aerodigestive tract cancer, squamous cell, alcohol-related, protection against","type":"related"},{"name":"alcohol dependence","type":"exact"},{"name":"alcohol dependence, protection against","type":"related"},{"name":"alcohol dependence, susceptibility to","type":"related"},{"name":"alcoholism","type":"exact"}],"termid":"MONDO:0007079","terms_by_termid":{"MONDO:0007079":null},"xrefs":{"Monarch":{"xref_id":"0007079"}}}


id: FYPO:0000923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of isocitrate dehydrogenase (NAD+) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal isocitrate dehydrogenase (NAD+) activity","termid":"FYPO:0000922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased isocitrate dehydrogenase (NAD+) activity","synonyms":[{"name":"increased NAD-IDH activity","type":"exact"}],"termid":"FYPO:0000923"}


id: GO:0046270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-toluenecarboxylate biosynthetic process (obsolete GO:0046270)","synonyms":[{"name":"4-toluenecarboxylate anabolism","type":"exact"},{"name":"4-toluenecarboxylate biosynthesis","type":"exact"},{"name":"4-toluenecarboxylate biosynthetic process","type":"exact"},{"name":"4-toluenecarboxylate formation","type":"exact"},{"name":"4-toluenecarboxylate synthesis","type":"exact"}],"termid":"GO:0046270"}


id: PBO:0061682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP107 divergent transcript","termid":"PBO:0061682"}


id: PBO:0000411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4 (predicted)","termid":"PBO:0000411"}


id: MONDO:0012967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemolytic anemia due to adenylate kinase deficiency is a rare hemolytic anemia due to an erythrocyte nucleotide metabolism disorder characterized by moderate to severe chronic nonspherocytic hemolytic anemia that may require regular blood transfusions and/or splenectomy and may be associated with psychomotor impairment.","definition_xrefs":["Orphanet:86817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hemolytic anemia due to adenylate kinase deficiency","secondary_identifiers":["SCTID:766982000","GARD:16760","MEDGEN:390802","MESH:C567228","OMIM:612631","UMLS:C2675459"],"synonyms":[{"name":"ADENYLATE KINASE deficiency, hemolytic anaemia due to","type":"related"},{"name":"ADENYLATE KINASE deficiency, hemolytic anemia due to","type":"related"}],"termid":"MONDO:0012967","xrefs":{"Monarch":{"xref_id":"0012967"}}}


id: PBO:0001198
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.1.4","termid":"PBO:0001198"}


id: MONDO:1012830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any craniomandibular osteopathy that occurs in dogs due to a mutation in the SLC37A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"craniomandibular osteopathy, dog","termid":"MONDO:1012054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniomandibular osteopathy, SLC37A2-related, dog","secondary_identifiers":["OMIA:002244-9615"],"termid":"MONDO:1012830","xrefs":{"Monarch":{"xref_id":"1012830"}}}


id: PBO:0033818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit 2-like Tca17 (predicted)","termid":"PBO:0033818"}


id: GO:0000458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage to separate a pre-LSU-rRNA from a pre-5S rRNA originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)","termid":"GO:0000449"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)","termid":"GO:0002108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0042254","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage between LSU-rRNA and 5S rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)","termid":"GO:0000458"}


id: FYPO:0002242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable tapered vegetative cell","termid":"FYPO:0002111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable elongated tapered vegetative cell","synonyms":[{"name":"inviable elongated bottle-shaped vegetative cell","type":"exact"},{"name":"inviable elongated bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated bottle/skittle vegetative cell","type":"exact"},{"name":"inviable elongated skittle-shaped vegetative cell","type":"exact"},{"name":"inviable elongated tapered cell during vegetative growth","type":"exact"},{"name":"inviable long tapered vegetative cell","type":"exact"},{"name":"lethal; elongated tapered vegetative cell","type":"exact"}],"termid":"FYPO:0002242"}


id: FYPO:0001800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is abolished, and the protein is instead detected distributed throughout the plasma membrane and/or cell cortex.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during vegetative growth","termid":"FYPO:0001585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to cell tip, with protein distributed in plasma membrane or cortex","synonyms":[{"name":"abolished protein localisation to cell tip, with protein distributed in plasma membrane or cortex","type":"exact"},{"name":"abolished protein localization to cell end, with protein distributed in plasma membrane or cortex","type":"exact"},{"name":"abolished protein localization to cell tip, with protein distributed in cell cortex","type":"narrow"},{"name":"abolished protein localization to cell tip, with protein distributed in cell membrane or cortex","type":"exact"},{"name":"abolished protein localization to cell tip, with protein distributed in plasma membrane","type":"narrow"},{"name":"abolished protein localization to cell tip, with protein distributed in plasma membrane or cortex during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cell tip, with protein distributed in plasma membrane or cortex, during vegetative growth","type":"exact"},{"name":"protein localization to cell tip abolished, with protein distributed in plasma membrane or cortex","type":"exact"}],"termid":"FYPO:0001800"}


id: MONDO:0020742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cataract, microcephaly, failure to thrive, kyphoscoliosis syndrome (obsolete MONDO:0020742)","secondary_identifiers":["OMIM:212540","Orphanet:1317","MESH:C537965"],"synonyms":[{"name":"CAMAK syndrome","type":"related"},{"name":"CAMFAK syndrome","type":"related"},{"name":"cataract, microcephaly, arthrogryposis, kyphosis syndrome","type":"related"},{"name":"cataract, microcephaly, failure to thrive, kyphoscoliosis syndrome","type":"related"},{"name":"cataract-microcephaly-failure to thrive-kyphoscoliosis","type":"related"}],"termid":"MONDO:0020742","xrefs":{"Monarch":{"xref_id":"0020742"}}}


id: GO:1900342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from dimethyl sulfide.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from dimethyl sulfide","termid":"GO:2001131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from dimethyl sulfide","termid":"GO:1900342"}


id: PBO:0028818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_replication_forks_during_cellular_response_to_hydroxyurea","termid":"PBO:0028818"}


id: PBO:0027834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_septum_edging_catabolic_process","termid":"PBO:0027834"}


id: MONDO:0007187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare hereditary disorder due to autosomal dominant transmission with hamartosis characterized by multiple early-onset basal cell carcinoma (BCC), multiple jaw keratocysts and skeletal abnormalities.","definition_xrefs":["Orphanet:377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"nevoid basal cell carcinoma syndrome","secondary_identifiers":["icd11.foundation:1012745138","NANDO:2200828","DOID:2512","DOID:0070365","MESH:D001478","GARD:7166","MedDRA:10062804","SCTID:69408002","UMLS:C0004779","NORD:1507","OMIMPS:109400","MEDGEN:2554","NCIT:C2892"],"synonyms":[{"name":"BCNS","type":"related"},{"name":"Gorlin syndrome","type":"exact"},{"name":"Gorlin-Goltz syndrome","type":"exact"},{"name":"NBCCS","type":"exact"},{"name":"basal cell nevus syndrome","type":"exact"},{"name":"multiple basal cell carcinomas","type":"exact"},{"name":"multiple basal cell nevi, odontogenic keratocysts, and skeletal anomalies","type":"related"},{"name":"nevoid basal cell cancer syndrome","type":"exact"},{"name":"nevoid basal cell carcinoma syndrome","type":"exact"}],"termid":"MONDO:0007187","xrefs":{"Monarch":{"xref_id":"0007187"}}}


id: PBO:0029461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere_morphology","termid":"PBO:0029461"}


id: GO:0010008
data:
  {"annotated_genes":["SJAG_02587","SJAG_04024","SJAG_00314","SJAG_02429","SJAG_01112","SJAG_01379","SJAG_04912","SJAG_03511","SJAG_00299","SJAG_00108","SJAG_01236","SJAG_01242","SJAG_04936","SJAG_05207","SJAG_03783","SJAG_00900","SJAG_04023","SJAG_01981","SJAG_03250","SJAG_04513","SJAG_07012","SJAG_05210","SJAG_03892","SJAG_00638","SJAG_00301","SJAG_00416","SJAG_03347","SJAG_04822","SJAG_02100","SJAG_04349","SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60668,72354,77863,79990,98486,101764,101776],"is_not":false,"summary":null,"term":"GO:0010008"},{"annotations":[90367],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010009"},{"annotations":[95687,99513,80105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031901"},{"annotations":[71887,87908],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000813"},{"annotations":[70730,71893,78246],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000814"},{"annotations":[70804,69811,75525,76174,70569,77560],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000815"},{"annotations":[91796,99312,75797,78244,100878,97457,87909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031902"},{"annotations":[62328,119249,60368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032585"},{"annotations":[98666,75036],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00314":null,"SJAG_00416":null,"SJAG_00638":null,"SJAG_00900":null,"SJAG_01112":null,"SJAG_01236":null,"SJAG_01242":null,"SJAG_01379":null,"SJAG_01981":null,"SJAG_02100":null,"SJAG_02429":null,"SJAG_02587":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03511":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04513":null,"SJAG_04822":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"endosome membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"secondary_identifiers":["NIF_Subcellular:sao978443756"],"synonyms":[{"name":"endosomal membrane","type":"exact"}],"termid":"GO:0010008","terms_by_termid":{"GO:0000813":null,"GO:0000814":null,"GO:0000815":null,"GO:0010008":null,"GO:0010009":null,"GO:0031901":null,"GO:0031902":null,"GO:0032585":null,"GO:0034424":null}}


id: PBO:0111132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1 family protein, DNA-repair associated protein, Srr1, conflicting annotations across species","termid":"PBO:0111132"}


id: GO:0008673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-gluconate + ATP = 2-dehydro-3-deoxy-6-phospho-D-gluconate + ADP + 2 H+.","definition_xrefs":["RHEA:14797","EC:2.7.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"2-dehydro-3-deoxygluconokinase activity","secondary_identifiers":["KEGG_REACTION:R01541","MetaCyc:DEOXYGLUCONOKIN-RXN"],"synonyms":[{"name":"2-keto-3-deoxy-D-gluconic acid kinase activity","type":"related"},{"name":"2-keto-3-deoxygluconate kinase activity","type":"related"},{"name":"2-keto-3-deoxygluconokinase (phosphorylating)","type":"related"},{"name":"2-keto-3-deoxygluconokinase activity","type":"related"},{"name":"3-deoxy-2-oxo-D-gluconate kinase activity","type":"related"},{"name":"ATP:2-dehydro-3-deoxy-D-gluconate 6-phosphotransferase activity","type":"related"},{"name":"KDG kinase activity","type":"related"},{"name":"ketodeoxygluconokinase activity","type":"related"}],"termid":"GO:0008673"}


id: PBO:0084579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YBR100W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YBR098W","termid":"PBO:0084579"}


id: PBO:0086242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that localizes to the mitochondrial intermembrane space; localizes via the Mia40p-Erv1p system; contains twin cysteine-x(9)-cysteine motifs","termid":"PBO:0086242"}


id: PBO:0064656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA binding protein 2","termid":"PBO:0064656"}


id: MONDO:0017561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital knee dislocation","termid":"MONDO:0017470"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital genu flexum","secondary_identifiers":["icd11.foundation:830907514","MEDGEN:1842651","GARD:21226","Orphanet:295232","UMLS:C5681090"],"termid":"MONDO:0017561","xrefs":{"Monarch":{"xref_id":"0017561"}}}


id: PBO:0049299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 2 pseudogene 1","termid":"PBO:0049299"}


id: PBO:0051777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing with AAA domain 1 like","termid":"PBO:0051777"}


id: GO:0062172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lutein.","definition_xrefs":["PMID:24397433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"lutein metabolic process","termid":"GO:0062170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lutein catabolic process","synonyms":[{"name":"lutein breakdown","type":"exact"},{"name":"lutein catabolism","type":"exact"},{"name":"lutein degradation","type":"exact"}],"termid":"GO:0062172"}


id: GO:0061100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuroendocrine cell of the lung epithelium.","definition_xrefs":["PMID:9126746","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"is_a","term_name":"lung secretory cell differentiation","termid":"GO:0061140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung neuroendocrine cell differentiation","termid":"GO:0061100"}


id: GO:0005020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with stem cell factor (SCF) receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate. Stem cell factor is a cytokine that stimulates mast cell growth and differentiation.","definition_xrefs":["GOC:jl","GOC:signaling","PMID:10698217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016301","GO:0003824","GO:0004672","GO:0038023","GO:0016740"],"is_obsolete":false,"name":"stem cell factor receptor activity","synonyms":[{"name":"KIT","type":"related"},{"name":"KIT ligand receptor activity","type":"exact"},{"name":"KL receptor activity","type":"exact"},{"name":"SCF receptor activity","type":"exact"}],"termid":"GO:0005020"}


id: PBO:0048400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 6","termid":"PBO:0048400"}


id: GO:0060713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the labyrinthine layer of the placenta is generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic placenta morphogenesis","termid":"GO:0060669"},{"relation_name":"part_of","term_name":"labyrinthine layer development","termid":"GO:0060711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labyrinthine layer morphogenesis","termid":"GO:0060713"}


id: PBO:0030268
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_with_unreplicated_DNA","termid":"PBO:0030268"}


id: PBO:0056275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1C member 1","termid":"PBO:0056275"}


id: GO:0033906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of 1,3-linkages between beta-D-glucuronate and N-acetyl-D-glucosamine residues in hyaluronate.","definition_xrefs":["EC:3.2.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hyaluronoglucuronidase activity","secondary_identifiers":["MetaCyc:3.2.1.36-RXN"],"synonyms":[{"name":"glucuronoglucosaminoglycan hyaluronate lyase activity","type":"related"},{"name":"hyaluronate 3-glycanohydrolase activity","type":"related"},{"name":"hyaluronidase activity","type":"broad"},{"name":"orgelase activity","type":"related"}],"termid":"GO:0033906"}


id: FYPO:0007566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation begins earlier than normal.","definition_xrefs":["PMID:11927555","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000337"],"is_obsolete":false,"name":"premature mitotic chromosome condensation","synonyms":[{"name":"advanced mitotic chromosome condensation","type":"exact"},{"name":"premature chromosome condensation during mitotic cell cycle","type":"related"},{"name":"premature mitotic chromosome condensation during vegetative growth","type":"exact"}],"termid":"FYPO:0007566"}


id: MONDO:0006003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the body of uterus.","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cancer","termid":"MONDO:0002715"},{"relation_name":"is_a","term_name":"corpus uteri neoplasm","termid":"MONDO:0021254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus cancer","secondary_identifiers":["EFO:0007532","ICD9:182","DOID:9460","MEDGEN:364875","SCTID:371972005","NCIT:C61574","UMLS:C1883486"],"synonyms":[{"name":"body of uterus cancer","type":"exact"},{"name":"cancer of body of uterus","type":"exact"},{"name":"cancer of the corpus uteri","type":"exact"},{"name":"corpus uteri cancer","type":"exact"},{"name":"endometrial cancer","type":"related"},{"name":"malignant body of uterus neoplasm","type":"exact"},{"name":"malignant neoplasm of body of uterus","type":"exact"},{"name":"uterine (including endometrial) cancer","type":"exact"},{"name":"uterine corpus cancer","type":"exact"}],"termid":"MONDO:0006003","xrefs":{"Monarch":{"xref_id":"0006003"}}}


id: MONDO:0020172
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the skin of eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid neoplasm","termid":"MONDO:0002235"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"palpebral epidermal tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:712469","UMLS:C1290083","SCTID:126499002","Orphanet:98581"],"synonyms":[{"name":"neoplasm of skin of eyelid","type":"exact"},{"name":"skin of eyelid neoplasm","type":"exact"},{"name":"skin of eyelid neoplasm (disease)","type":"exact"},{"name":"skin of eyelid tumor","type":"exact"},{"name":"skin of eyelid tumour","type":"exact"},{"name":"tumor of skin of eyelid","type":"exact"},{"name":"tumour of skin of eyelid","type":"exact"}],"termid":"MONDO:0020172","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0020172"}}}


id: FYPO:0002763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of tRNA (guanine(9)-N(1))-methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal tRNA (guanine(9)-N(1))-methyltransferase activity","termid":"FYPO:0002763"}


id: PBO:0089759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine protein transferase Ate1","termid":"PBO:0089759"}


id: GO:1905490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sensory neuron axon guidance.","definition_xrefs":["GO_REF:0000058","PMID:16516839","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of axon guidance","termid":"GO:1902668"},{"relation_name":"is_a","term_name":"regulation of sensory neuron axon guidance","termid":"GO:1905489"},{"relation_name":"negatively_regulates","term_name":"sensory neuron axon guidance","termid":"GO:0097374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sensory neuron axon guidance","synonyms":[{"name":"down regulation of sensory neuron axon guidance","type":"exact"},{"name":"down-regulation of sensory neuron axon guidance","type":"exact"},{"name":"downregulation of sensory neuron axon guidance","type":"exact"},{"name":"inhibition of sensory neuron axon guidance","type":"narrow"}],"termid":"GO:1905490"}


id: GO:0047762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-caffeate + O2 = 3-(2-carboxyethenyl)-cis,cis-muconate + 2 H+.","definition_xrefs":["RHEA:22216","EC:1.13.11.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"caffeate 3,4-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03365","MetaCyc:CAFFEATE-34-DIOXYGENASE-RXN"],"synonyms":[{"name":"3,4-dihydroxy-trans-cinnamate:oxygen 3,4-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047762"}


id: GO:0070922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a single-stranded small RNA is incorporated within the RNA-initiated silencing complex (RISC). The assembly includes the maturation of the small RNA, the stabilization of the complex by accessory proteins of the RISC complex, duplex separation and the release of the second strand, forming a base-pairing complement complex that mediates gene silencing by small RNA.","definition_xrefs":["PMID:14744438","PMID:27184117","PMID:14512631","PMID:19239886","PMID:22233755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"RISC complex assembly","secondary_identifiers":["GO:0035280","GO:0070923","GO:0035087"],"synonyms":[{"name":"RISC assembly","type":"related"},{"name":"gene silencing by RNA, small RNA loading onto RISC","type":"related"},{"name":"miRISC assembly","type":"broad"},{"name":"miRNA loading onto RISC","type":"narrow"},{"name":"siRNA loading onto RISC involved in RNA interference","type":"narrow"},{"name":"siRNA loading onto RISC involved in gene silencing by small RNA","type":"narrow"},{"name":"small RNA loading onto RISC","type":"related"}],"termid":"GO:0070922"}


id: PBO:0111950
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DBF type","termid":"PBO:0111950"}


id: PBO:0110333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PF pseudogene 3","termid":"PBO:0110333"}


id: PBO:0003284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Kms2","termid":"PBO:0003284"}


id: PBO:0045697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 3 pseudogene 1","termid":"PBO:0045697"}


id: MONDO:0003011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade carcinoma of the kidney characterized by the presence of tubules which are separated by mucinous stroma. Often the tubular structures have a spindle cell appearance. Patients are usually asymptomatic and occasionally they may present with hematuria or flank pain.","definition_xrefs":["NCIT:C39807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"},{"relation_name":"is_a","term_name":"renal tubule disorder","termid":"MONDO:0021568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"mucinous tubular and spindle renal cell carcinoma","secondary_identifiers":["SCTID:764990003","GARD:21418","DOID:4472","UMLS:C4707257","Orphanet:319322","ICDO:0000/0","ONCOTREE:MTSCC","MEDGEN:1640204"],"synonyms":[{"name":"carcinoma, renal, tubular, malignant","type":"exact"},{"name":"mucinous tubular and spindle cell carcinoma of the kidney","type":"exact"},{"name":"mucinous tubular and spindle cell renal carcinoma","type":"exact"},{"name":"renal mucinous tubular spindle cell carcinoma","type":"related"}],"termid":"MONDO:0003011","xrefs":{"Monarch":{"xref_id":"0003011"}}}


id: FYPO:0003651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to nitrosative stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during cellular response to nitrosative stress","synonyms":[{"name":"decreased protein accumulation during cellular response to nitrosative stress","type":"related"},{"name":"decreased protein level during cellular response to nitrosative stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to nitrosative stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to nitrosative stress","type":"exact"}],"termid":"FYPO:0003651"}


id: GO:1905375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a homocysteine stimulus.","definition_xrefs":["PMID:26722473","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to homocysteine","termid":"GO:1905374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to homocysteine","synonyms":[{"name":"cellular response to 2-amino-4-mercaptobutyric acid","type":"exact"},{"name":"cellular response to 2-amino-4-sulfanylbutanoic acid","type":"exact"},{"name":"cellular response to Hcy","type":"exact"}],"termid":"GO:1905375"}


id: PBO:0056090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme g1","termid":"PBO:0056090"}


id: GO:0072268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the metanephros to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in metanephros development","synonyms":[{"name":"metanephros pattern formation","type":"related"},{"name":"metanephros pattern specification","type":"exact"},{"name":"pattern formation involved in metanephros development","type":"related"}],"termid":"GO:0072268"}


id: PBO:0081026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 7B","termid":"PBO:0081026"}


id: PBO:0065733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 4","termid":"PBO:0065733"}


id: PBO:0005636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine synthase Pps1","termid":"PBO:0005636"}


id: PBO:0003280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp46 (predicted)","termid":"PBO:0003280"}


id: FYPO:0001858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal fatty acid synthase activity","termid":"FYPO:0000720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased fatty acid synthase activity","synonyms":[{"name":"increased FAS activity","type":"exact"}],"termid":"FYPO:0001858"}


id: PBO:0000916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranyltranstransferase Fps1","termid":"PBO:0000916"}


id: GO:0033659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the structure or function of host cell mitochondria. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:35069483","PMID:37175745","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical structure","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host mitochondrion","synonyms":[{"name":"disruption by symbiont of host mitochondrion","type":"exact"},{"name":"modification by symbiont of host mitochondrion","type":"related"}],"termid":"GO:0033659"}


id: GO:0002808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antibacterial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antibacterial peptide production","termid":"GO:0002786"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"},{"relation_name":"regulates","term_name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"}


id: PBO:0088686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase complex subunit Iml1","termid":"PBO:0088686"}


id: PBO:0064991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photoreceptor disc component","termid":"PBO:0064991"}


id: PBO:0051963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPRIP like 1","termid":"PBO:0051963"}


id: PBO:0116794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPAMD8 pseudogene 1","termid":"PBO:0116794"}


id: GO:1905291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CAMKK-AMPK signaling cascade.","definition_xrefs":["PMID:22128786","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium-mediated signaling","termid":"GO:0050850"},{"relation_name":"is_a","term_name":"regulation of CAMKK-AMPK signaling cascade","termid":"GO:1905289"},{"relation_name":"positively_regulates","term_name":"CAMKK-AMPK signaling cascade","termid":"GO:0061762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of CAMKK-AMPK signaling cascade","synonyms":[{"name":"activation of CAMKK-AMPK signaling cascade","type":"narrow"},{"name":"activation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"positive regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"up regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"up regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"up-regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"up-regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"upregulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"upregulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:1905291"}


id: GO:1901699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen compound stimulus.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrogen compound","synonyms":[{"name":"cellular response to nitrogen molecular entity","type":"exact"}],"termid":"GO:1901699"}


id: PBO:0070791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 21","termid":"PBO:0070791"}


id: PBO:0075258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 11","termid":"PBO:0075258"}


id: MONDO:0015440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 6 syndrome is a rare chromosomal anomaly syndrome with highly variable phenotype principally characterized by prenatal/postnatal growth failure, intellectual disability, developmental delay, craniofacial dysmorphism (incl. microcephaly, microphthalmia, epicanthus, low-set and malformed ears, broad and flat nasal bridge, full lips, micrognathia), central nervous system anomalies (e.g. hydrocephalus, cortical atrophy, ventriculomegaly), short neck, and delayed bone age. Cardiac defects, limb anomalies, hip joint malformations, and seizures have also been reported.","definition_xrefs":["Orphanet:1448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 6 disorder","termid":"MONDO:0700013"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 6","secondary_identifiers":["MEDGEN:167069","MESH:C537763","NCIT:C121985","NORD:958","SCTID:765488003","UMLS:C0795814","GARD:6095"],"synonyms":[{"name":"Chromosome 6 Ring","type":"exact"},{"name":"R6","type":"related"},{"name":"Ring 6","type":"related"},{"name":"Ring chromosome 6 syndrome","type":"related"},{"name":"Ring chromosome type 6","type":"exact"},{"name":"chromosome 6 ring","type":"related"},{"name":"rose cluster 6","type":"exact"}],"termid":"MONDO:0015440","xrefs":{"Monarch":{"xref_id":"0015440"}}}


id: PBO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.1.13","termid":"PBO:0001988"}


id: PBO:0045297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 49","termid":"PBO:0045297"}


id: GO:1900560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of austinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"austinol metabolic process","termid":"GO:1900558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"austinol biosynthetic process","synonyms":[{"name":"austinol anabolism","type":"exact"},{"name":"austinol biosynthesis","type":"exact"},{"name":"austinol formation","type":"exact"},{"name":"austinol synthesis","type":"exact"}],"termid":"GO:1900560"}


id: MONDO:0002182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an individual's inability to comprehend or share ideas or feelings because of an impairment in language, speech, or hearing.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific developmental disorder","termid":"MONDO:0000592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"communication disorder","secondary_identifiers":["UMLS:C0009460","ICD9:307.9","MESH:D003147","NCIT:C2958","SCTID:278919001","DOID:2033","MEDGEN:3549"],"synonyms":[{"name":"communicative disorders","type":"exact"}],"termid":"MONDO:0002182","xrefs":{"Monarch":{"xref_id":"0002182"}}}


id: MONDO:0003427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign lung neoplasm characterized by the presence of a fibrovascular stroma lined by cuboidal to columnar cells. Patients are usually asymptomatic and it is incidentally discovered as a pulmonary nodule during chest X-ray examination. Surgical excision is curative.","definition_xrefs":["NCIT:C3494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenoma","termid":"MONDO:0002533"},{"relation_name":"is_a","term_name":"bronchial neoplasm","termid":"MONDO:0002807"},{"relation_name":"is_a","term_name":"lung adenoma","termid":"MONDO:0003422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchus adenoma","secondary_identifiers":["UMLS:C0149845","DOID:5391","MEDGEN:56206","ICDO:8260/0"],"synonyms":[{"name":"adenoma of bronchus","type":"exact"},{"name":"adenoma of the bronchus","type":"exact"},{"name":"adenoma, bronchial, benign","type":"exact"},{"name":"bronchial adenoma","type":"exact"},{"name":"bronchial adenoma NOS (morphologic abnormality)","type":"exact"},{"name":"bronchus adenoma","type":"exact"},{"name":"lung papillary adenoma","type":"exact"},{"name":"papillary adenoma of type II pneumocytes","type":"exact"},{"name":"peripheral papillary tumor of type II pneumocytes","type":"exact"},{"name":"peripheral papillary tumour of type II pneumocytes","type":"exact"},{"name":"type II pneumocyte adenoma","type":"exact"}],"termid":"MONDO:0003427","xrefs":{"Monarch":{"xref_id":"0003427"}}}


id: GO:0016993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: precorrin-8X = hydrogenobyrinate.","definition_xrefs":["EC:5.4.99.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular acyltransferase activity","termid":"GO:0016867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"precorrin-8X methylmutase activity","secondary_identifiers":["RHEA:22512","MetaCyc:5.4.1.2-RXN"],"synonyms":[{"name":"HBA synthase activity","type":"related"},{"name":"hydrogenobyrinic acid-binding protein activity","type":"narrow"},{"name":"precorrin isomerase activity","type":"related"},{"name":"precorrin-8X 11,12-methylmutase activity","type":"exact"}],"termid":"GO:0016993"}


id: MONDO:0012104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lipodystrophy characterized by the association of lipoatrophy of the upper part of the body and lipohypertrophy of the thighs.","definition_xrefs":["Orphanet:79087"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"excluded_subClassOf","term_name":"laminopathy","termid":"MONDO:0021106"},{"relation_name":"is_a","term_name":"acquired lipodystrophy","termid":"MONDO:0020089"},{"relation_name":"is_a","term_name":"partial lipodystrophy","termid":"MONDO:0027767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"acquired partial lipodystrophy","secondary_identifiers":["GARD:10509","NANDO:1200862","icd11.foundation:2042663302","MEDGEN:66352","MESH:C562448","NCIT:C129723","SCTID:75659004","UMLS:C0220989"],"synonyms":[{"name":"APLD","type":"exact"},{"name":"APLD, susceptibility to","type":"related"},{"name":"Barraquer-Simons syndrome","type":"exact"},{"name":"acquired partial lipodystrophy","type":"exact"},{"name":"lipodystophy partial progressive","type":"related"},{"name":"lipodystrophy cephalothoracic type","type":"related"},{"name":"lipodystrophy partial acquired","type":"related"},{"name":"lipodystrophy, cephalothoracic type","type":"related"},{"name":"lipodystrophy, partial, acquired, susceptibility to","type":"related"},{"name":"lipodystrophy, partial, progressive","type":"related"},{"name":"partial acquired lipodystrophy","type":"exact"},{"name":"progressive cephalothoracic lipodystrophy","type":"exact"},{"name":"susceptibility to partial acquired lipodystrophy","type":"related"}],"termid":"MONDO:0012104","xrefs":{"Monarch":{"xref_id":"0012104"}}}


id: FYPO:0003226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein localization to mitotic spindle","synonyms":[{"name":"delayed onset of protein localisation to mitotic spindle","type":"exact"},{"name":"delayed onset of protein localization to spindle during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein mitotic spindle to mitotic spindle during vegetative growth","type":"exact"},{"name":"delayed protein localization to mitotic spindle","type":"exact"}],"termid":"FYPO:0003226"}


id: PBO:0055247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2674","termid":"PBO:0055247"}


id: FYPO:0004054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleus during cellular response to salt stress","synonyms":[{"name":"abolished protein localisation to nucleus during cellular response to salt stress","type":"exact"},{"name":"abolished protein localization to nucleus during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleus during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"abolished protein localization to nucleus during salt stress","type":"exact"},{"name":"nuclear exclusion during cellular response to salt stress","type":"related"},{"name":"nuclear protein exclusion during cellular response to salt stress","type":"related"},{"name":"protein localization to nucleus abolished during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004054"}


id: PBO:0050573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HCLS1 binding protein 3","termid":"PBO:0050573"}


id: PBO:0072758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 8","termid":"PBO:0072758"}


id: PBO:0063034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK1 interacting protein 1","termid":"PBO:0063034"}


id: MONDO:1010456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in woolly monkeys.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, woolly monkeys","secondary_identifiers":["OMIA:000515-9518"],"termid":"MONDO:1010456","xrefs":{"Monarch":{"xref_id":"1010456"}}}


id: PBO:0027577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth","termid":"PBO:0027577"}


id: PBO:0089932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA-binding protein","termid":"PBO:0089932"}


id: PBO:0042357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD99 molecule pseudogene 1","termid":"PBO:0042357"}


id: GO:0004181
data:
  {"annotated_genes":["SJAG_00451","SJAG_03586"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57984,74067],"is_not":false,"summary":null,"term":"GO:0004181"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single C-terminal amino acid residue from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.","direct_ancestors":[{"relation_name":"is_a","term_name":"carboxypeptidase activity","termid":"GO:0004180"},{"relation_name":"is_a","term_name":"metalloexopeptidase activity","termid":"GO:0008235"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00451":null,"SJAG_03586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0008233","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"metallocarboxypeptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["EC:3.4.17.-","Reactome:R-HSA-8866105","Reactome:R-HSA-2028294","Reactome:R-HSA-9023159","Reactome:R-HSA-9023163","Reactome:R-HSA-8852809","Reactome:R-HSA-8955712","Reactome:R-HSA-2022378","Reactome:R-HSA-2022379"],"termid":"GO:0004181","terms_by_termid":{"GO:0004181":null}}


id: PBO:0067027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 40, pseudogene","termid":"PBO:0067027"}


id: GO:0140117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H4 monomethylated at lysine 20.","definition_xrefs":["PMID:19494831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 reader activity","termid":"GO:0140008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140566"}],"interesting_parent_ids":["GO:0003674","GO:0140566","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"histone H4K20me1 reader activity","synonyms":[{"name":"H4K20me1 modified histone binding","type":"narrow"}],"termid":"GO:0140117"}


id: MONDO:0010953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi anemia caused by mutations of the FANCE gene. This is a protein coding gene. It is required for the nuclear accumulation of FANCC and provides a critical bridge between the FA complex and FANCD2.","definition_xrefs":["NCIT:C125709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005570","MONDO:0002280","MONDO:0005046","MONDO:0005066"],"is_obsolete":false,"name":"Fanconi anemia complementation group E","secondary_identifiers":["UMLS:C3160739","DOID:0111084","OMIM:600901","GARD:15324","MEDGEN:463628"],"synonyms":[{"name":"FACE","type":"exact"},{"name":"FANCE","type":"exact"},{"name":"FANCE Fanconi anaemia","type":"exact"},{"name":"FANCE Fanconi anemia","type":"exact"},{"name":"Fanconi Anemia, complementation group type E","type":"exact"},{"name":"Fanconi anaemia caused by mutation in FANCE","type":"exact"},{"name":"Fanconi anaemia complementation group type E","type":"exact"},{"name":"Fanconi anemia caused by mutation in FANCE","type":"exact"},{"name":"Fanconi anemia complementation group E","type":"exact"},{"name":"Fanconi anemia complementation group type E","type":"exact"},{"name":"Fanconi anemia, complementation group E","type":"related"},{"name":"face","type":"exact"}],"termid":"MONDO:0010953","xrefs":{"Monarch":{"xref_id":"0010953"}}}


id: GO:0008934
data:
  {"annotated_genes":["SJAG_03739"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77058],"is_not":false,"summary":null,"term":"GO:0008934"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1-phosphate + H2O = myo-inositol + phosphate.","definition_xrefs":["RHEA:27670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol monophosphate phosphatase activity","termid":"GO:0052834"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"inositol monophosphate 1-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN0-5408","Reactome:R-HSA-1855154"],"synonyms":[{"name":"L-myo-inositol-1-phosphate phosphatase activity","type":"related"},{"name":"inositol 1-phosphatase activity","type":"related"},{"name":"inositol-1(or 4)-monophosphatase activity","type":"broad"},{"name":"myo-inositol 1-phosphatase activity","type":"related"},{"name":"myo-inositol-1(or 4)-monophosphatase activity","type":"broad"},{"name":"myo-inositol-1(or 4)-phosphate phosphohydrolase activity","type":"broad"},{"name":"myo-inositol-1-phosphatase activity","type":"related"}],"termid":"GO:0008934","terms_by_termid":{"GO:0008934":null}}


id: MONDO:0044347
data:
  {"annotated_genes":["SJAG_04217","SJAG_00839","SJAG_03929","SJAG_02796","SJAG_02297","SJAG_00235"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[85983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[85790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009606"},{"annotations":[85337,85338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009605"},{"annotations":[85400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"}]},"cv_name":"mondo","definition":"A disease or disorder that involves the erythrocyte.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00839":null,"SJAG_02297":null,"SJAG_02796":null,"SJAG_03929":null,"SJAG_04217":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"erythrocyte disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:526127","ICD9:289.9","SCTID:38292009","UMLS:C0221016"],"synonyms":[{"name":"disease of erythrocyte","type":"exact"},{"name":"disease or disorder of erythrocyte","type":"exact"},{"name":"disorder of erythrocyte","type":"exact"},{"name":"erythrocyte disease","type":"exact"},{"name":"erythrocyte disease or disorder","type":"exact"},{"name":"red blood cell disease","type":"exact"},{"name":"red blood cell disorder","type":"exact"}],"termid":"MONDO:0044347","terms_by_termid":{"MONDO:0009605":null,"MONDO:0009606":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0013275":null},"xrefs":{"Monarch":{"xref_id":"0044347"}}}


id: FYPO:0005425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is elongated, is curved along the long axis, and contains cytoplasmic microtubules that are longer than normal and curved. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"long curved microtubules","termid":"FYPO:0004863"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002399","FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"curved elongated vegetative cell with long curved interphase microtubules","synonyms":[{"name":"curved elongated cell with elongated curved interphase microtubules","type":"exact"},{"name":"curved elongated cell with long curved interphase microtubules during vegetative growth","type":"exact"},{"name":"curved elongated vegetative cell with long curved cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"curved elongated vegetative cell with long curved interphase cytoplasmic microtubules","type":"exact"},{"name":"curved elongated vegetative cell with long curved interphase microtubules during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005425"}


id: PBO:0056988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 31","termid":"PBO:0056988"}


id: GO:0009495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin-like 2Fe-2S ferredoxin (obsolete GO:0009495)","synonyms":[{"name":"thioredoxin-like 2Fe-2S ferredoxin","type":"exact"}],"termid":"GO:0009495"}


id: MONDO:0024633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kidney damage that results from chronically elevated blood pressure; complications include glomerular damage resulting in proteinuria and hematuria.","definition_xrefs":["NCIT:C4757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hypertensive nephropathy","secondary_identifiers":["ICD9:403.90","OMIM:608026","UMLS:C0848548","SCTID:38481006","MESH:C563161","MEDGEN:167258"],"synonyms":[{"name":"HNP1","type":"exact"},{"name":"hypertensive nephropathy","type":"exact"},{"name":"hypertensive renal disease","type":"exact"}],"termid":"MONDO:0024633","xrefs":{"Monarch":{"xref_id":"0024633"}}}


id: PBO:0031458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_leptomycin_B","termid":"PBO:0031458"}


id: MONDO:0004112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the bladder due to irradiation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation cystitis","secondary_identifiers":["ICD10CM:N30.4","MEDGEN:510221","NCIT:C123174","DOID:7127","ICD9:595.82","SCTID:11251000","UMLS:C0156270"],"synonyms":[{"name":"irradiation cystitis","type":"exact"}],"termid":"MONDO:0004112","xrefs":{"Monarch":{"xref_id":"0004112"}}}


id: PBO:0055564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3000","termid":"PBO:0055564"}


id: GO:0005729
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasmid commonly found in Saccharomyces, inherited in a non-Mendelian manner and often present in 100-400 copies.","definition_xrefs":["PMID:12073320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrachromosomal circular DNA","termid":"GO:0005727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"2-micrometer circle DNA","termid":"GO:0005729"}


id: GO:0043911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lysine + 2-oxoglutarate = L-glutamate + 6-amino-2-oxohexanoate.","definition_xrefs":["GOC:jl","PMID:17259313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"D-lysine transaminase activity","synonyms":[{"name":"D-lysine aminotransferase activity","type":"exact"}],"termid":"GO:0043911"}


id: PR:O94700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endothelial differentiation-related factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02913","PRO:DNx","PANTHER:PTHR10245:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiprotein-bridging factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.17","secondary_identifiers":["UniProtKB:O94700"],"synonyms":[{"name":"Spom972h-EDF1","type":"exact"}],"termid":"PR:O94700"}


id: PATO:0000797
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000797 urination value (obsolete PATO:0000797)","termid":"PATO:0000797"}


id: PR:O74451
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pus3 gene.","definition_xrefs":["UniProtKB:O74451","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase C16C4.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.06c","synonyms":[{"name":"Spom972h-pus3","type":"exact"}],"termid":"PR:O74451"}


id: MONDO:0005290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A clinical syndrome resulting from direct or indirect muscle injury and subsequent release of myoglobin into the plasma.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete rhabdomyolysis (obsolete MONDO:0005290)","secondary_identifiers":["HP:0003201","NCIT:C118318","MESH:D012206","ICD9:728.88","SCTID:240131006"],"synonyms":[{"name":"rhabdomyolysis","type":"exact"},{"name":"rhabdomyolysis (disease)","type":"exact"}],"termid":"MONDO:0005290","xrefs":{"Monarch":{"xref_id":"0005290"}}}


id: GO:1903396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of secondary cell septum biogenesis.","definition_xrefs":["GOC:TermGenie","PMID:23878277","GOC:di","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic division septum assembly","termid":"GO:0140280"},{"relation_name":"is_a","term_name":"regulation of secondary cell septum biogenesis","termid":"GO:1903395"},{"relation_name":"negatively_regulates","term_name":"secondary cell septum biogenesis","termid":"GO:1990344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0008150","GO:0000281"],"is_obsolete":false,"name":"negative regulation of secondary cell septum biogenesis","synonyms":[{"name":"down regulation of secondary cell septum biogenesis","type":"exact"},{"name":"down-regulation of secondary cell septum biogenesis","type":"exact"},{"name":"downregulation of secondary cell septum biogenesis","type":"exact"},{"name":"inhibition of secondary cell septum biogenesis","type":"narrow"}],"termid":"GO:1903396"}


id: PBO:0048117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucose mutarotase","termid":"PBO:0048117"}


id: GO:1901382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chorionic trophoblast cell proliferation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"chorionic trophoblast cell proliferation","termid":"GO:0097360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chorionic trophoblast cell proliferation","termid":"GO:1901382"}


id: MONDO:0016843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"20q13.33 is a rare chromosomal anomaly syndrome resulting from the partial deletion of the long arm of chromosome 20 with a highly variable phenotype typically characterized by hypotonia, intellectual disability, cognitive and language deficits (including decreased or absent speech), pre and post-natal growth retardation, feeding difficulties, microcephaly, and malformed hands and feet. Neurodevelopmental disorders (including hyperactivity, social interactive problems and autism spectrum disorder), seizures and dysmorphic facial features (high forehead, hypertelorism, malformed ears, broad nasal bridge, bulbous nasal tip, thin upper lip, small chin) are frequently associated.","definition_xrefs":["Orphanet:261311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 20","termid":"MONDO:0016918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20q13.33 microdeletion syndrome","secondary_identifiers":["SCTID:733520002","GARD:20778","MEDGEN:1384661","UMLS:C4518823"],"synonyms":[{"name":"Del(20)(q13.33)","type":"exact"},{"name":"monosomy 20q13.33","type":"exact"}],"termid":"MONDO:0016843","xrefs":{"Monarch":{"xref_id":"0016843"}}}


id: GO:0070098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a chemokine binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to chemokine","termid":"GO:1990869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"chemokine-mediated signaling pathway","synonyms":[{"name":"chemokine-mediated signalling pathway","type":"exact"}],"termid":"GO:0070098"}


id: PBO:0035817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_trimethylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0035817"}


id: PBO:0050138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 48","termid":"PBO:0050138"}


id: GO:0036209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9beta-pimara-7,15-diene + 3 O2 + 3 reduced [NADPH-hemoprotein reductase] = 9beta-pimara-7,15-dien-19-oate + 4 H+ + 4 H2O + 3 oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["RHEA:31951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"9beta-pimara-7,15-diene oxidase activity","secondary_identifiers":["EC:1.14.14.111","KEGG_REACTION:R09865","MetaCyc:RXN-15437","GO:0102609"],"synonyms":[{"name":"9-beta-stemod-13(17)-ene oxidase activity","type":"related"}],"termid":"GO:0036209"}


id: MONDO:0020185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eyebrow/eyelashes hypertrichosis (obsolete MONDO:0020185)","secondary_identifiers":["Orphanet:98595"],"termid":"MONDO:0020185","xrefs":{"Monarch":{"xref_id":"0020185"}}}


id: PBO:0113146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-dependent zinc transferase; couples GTP hydrolysis to the activation of methionine aminopeptidase Map1p, especially during zinc starvation; deletion confers reduced fitness in saline; contains GTPase sequence motifs and a CxCC metal-binding motif","termid":"PBO:0113146"}


id: PBO:0072743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A7A","termid":"PBO:0072743"}


id: PBO:0072207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 6","termid":"PBO:0072207"}


id: GO:0097654
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that is capable of fusing intracellular vesicles to the plasma membrane of platelets for exocytosis of alpha-granules or dense granules. Contains isoforms of VAMP, SNAP and syntaxin proteins. Ternary SNARE complexes interact in a circular array to form ring complexes or channels around the membrane fusion. A common composition in human is VAMP-8, SNAP-23 and syntaxin-2 or -4.","definition_xrefs":["PMID:12130530","PMID:19450911","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"platelet SNARE complex","termid":"GO:0097654"}


