# terms

id: MONDO:0007258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine teeth, absence of upper permanent","secondary_identifiers":["OMIM:114600","MEDGEN:396244","UMLS:C1861899"],"synonyms":[{"name":"canine teeth, absence of upper permanent","type":"exact"}],"termid":"MONDO:0007258","xrefs":{"Monarch":{"xref_id":"0007258"}}}


id: PBO:0039977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 5A","termid":"PBO:0039977"}


id: PBO:0045820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 10","termid":"PBO:0045820"}


id: PBO:0087033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L16A; N-terminally acetylated, binds 5.8 S rRNA; transcriptionally regulated by Rap1p; homologous to mammalian ribosomal protein L13A and bacterial L13; RPL16A has a paralog, RPL16B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087033"}


id: GO:0102123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A4 + O2 + H+ + NAD(P)H = 16alpha,17-epoxy gibberellin A4 + H2O + NAD(P).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A4 16alpha,17 epoxidase activity (obsolete GO:0102123)","termid":"GO:0102123"}


id: FYPO:0006316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more spindle pole bodies (SPBs) than normal during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:29259000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole bodies present in increased numbers during meiosis","termid":"FYPO:0004609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"spindle pole bodies present in increased numbers during meiosis II","synonyms":[{"name":"SPBs present in increased numbers during meiosis II","type":"exact"},{"name":"excess meiotic spindle pole bodies present during meiosis II","type":"exact"},{"name":"excess spindle pole bodies present during meiosis II","type":"exact"},{"name":"extra spindle pole bodies present during meiosis II","type":"exact"},{"name":"spindle pole bodies present in greater numbers during meiosis II","type":"exact"},{"name":"spindle pole bodies present in increased numbers during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006316"}


id: PBO:0076870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 16, pseudogene","termid":"PBO:0076870"}


id: PBO:0090128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L67","termid":"PBO:0090128"}


id: MONDO:1012261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stringhalt, non-human animal","termid":"MONDO:1011631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stringhalt, horse","secondary_identifiers":["OMIA:000950-9796"],"termid":"MONDO:1012261","xrefs":{"Monarch":{"xref_id":"1012261"}}}


id: PBO:0002489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor (predicted)","termid":"PBO:0002489"}


id: FYPO:0001624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuolar asparagine level","synonyms":[{"name":"normal level of asparagine in vacuole","type":"exact"},{"name":"normal vacuolar L-asparagine level","type":"exact"},{"name":"normal vacuolar asparagine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001624"}


id: PBO:0077797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin family 1 member B","termid":"PBO:0077797"}


id: FYPO:0008062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding to the chromatin central core by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PMID:15908586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin binding at centromere central core","termid":"FYPO:0008062"}


id: PBO:0053430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 375","termid":"PBO:0053430"}


id: GO:0005351
data:
  {"annotated_genes":["SJAG_03608","SJAG_03820","SJAG_02958","SJAG_04905","SJAG_03960","SJAG_04068","SJAG_03606","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70852,72745,72941,72966,74478,76094],"is_not":false,"summary":null,"term":"GO:0005351"},{"annotations":[117007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[95562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[75394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: carbohydrate(out) + H+(out) = carbohydrate(in) + H+(in).","definition_xrefs":["TC:2.A.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02958":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"carbohydrate:proton symporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015542","GO:0005403"],"synonyms":[{"name":"cation/sugar symporter activity","type":"narrow"},{"name":"hydrogen:sugar symporter activity","type":"narrow"},{"name":"hydrogen:sugar transporter activity","type":"broad"},{"name":"lactose/glucose efflux transporter activity","type":"narrow"},{"name":"proton:sugar symporter activity","type":"exact"},{"name":"sugar efflux transmembrane transporter activity","type":"narrow"},{"name":"sugar porter activity","type":"narrow"},{"name":"sugar transporter","type":"broad"},{"name":"sugar:hydrogen ion symporter activity","type":"narrow"},{"name":"sugar:hydrogen symporter activity","type":"exact"},{"name":"sugar:proton symporter activity","type":"narrow"}],"termid":"GO:0005351","terms_by_termid":{"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0008506":null}}


id: GO:0018445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of prothoracicotrophic hormone, a peptide hormone that is secreted by the brain and, upon receptor binding, acts on the prothoracic gland to stimulate the release of ecdysone in insects.","definition_xrefs":["PMID:3301403","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0005488","GO:0098772","GO:0005515","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"prothoracicotrophic hormone activity","termid":"GO:0018445"}


id: PBO:0061202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOC2 like nucleolar associated transcriptional repressor pseudogene 2","termid":"PBO:0061202"}


id: GO:1901354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-canavanine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-canavanine","termid":"GO:1901354"}


id: FYPO:0005350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear chromatin organization is abnormal, such that chromatin is distributed in a ring-shaped structure around the nuclear periphery rather than throughout the nucleus.","definition_xrefs":["PMID:16453724","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"abnormal chromatin organization resulting in peripheral chromatin distribution","synonyms":[{"name":"abnormal chromatin organisation resulting in peripheral chromatin distribution","type":"exact"},{"name":"abnormal chromatin organization resulting in peripheral chromatin distribution during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin organization resulting in peripheral chromatin distribution during vegetative growth","type":"exact"},{"name":"abnormal chromatin organization resulting in ring-shaped chromatin distribution","type":"exact"},{"name":"abnormal nuclear chromatin organization resulting in peripheral chromatin distribution","type":"exact"},{"name":"chromatin abnormally dispersed around nuclear periphery","type":"related"}],"termid":"FYPO:0005350"}


id: MONDO:0008557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paris-Trousseau thrombocytopenia (TCPT) is a contiguous gene syndrome characterized by mild bleeding tendency, variable thrombocytopenia (THC), dysmorphic facies, abnormal giant alpha-granules in platelets and dysmegakaryopoiesis.","definition_xrefs":["Orphanet:851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 11","termid":"MONDO:0016910"},{"relation_name":"is_a","term_name":"alpha granule disease","termid":"MONDO:0020117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Paris-Trousseau thrombocytopenia","secondary_identifiers":["UMLS:C1956093","GARD:4224","OMIM:188025","icd11.foundation:1441183910","MEDGEN:365037"],"synonyms":[{"name":"Paris-Trousseau syndrome","type":"related"},{"name":"TCPT","type":"related"},{"name":"chromosome 11q23 deletion syndrome","type":"related"},{"name":"thrombocytopenia Paris-Trousseau type","type":"related"},{"name":"thrombocytopenia, Paris-TROUSSEAU type","type":"related"},{"name":"thrombocytopenia, Paris-Trousseau type, Isolated cases","type":"exact"}],"termid":"MONDO:0008557","xrefs":{"Monarch":{"xref_id":"0008557"}}}


id: FYPO:0004645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","termid":"FYPO:0004644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","termid":"FYPO:0004645"}


id: FYPO:0003156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the monopolar growth of a cell is normal (i.e. indistinguishable from wild type in timing, extent, rate, etc.) in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:24146635","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell growth","termid":"FYPO:0002085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal monopolar cell growth","synonyms":[{"name":"normal monopolar vegetative cell growth","type":"exact"}],"termid":"FYPO:0003156"}


id: GO:0032136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing an A/C mispair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"adenine/cytosine mispair binding","synonyms":[{"name":"A/C mispair binding","type":"exact"},{"name":"C/A mispair binding","type":"exact"},{"name":"cytosine/adenine mispair binding","type":"related"}],"termid":"GO:0032136"}


id: GO:0005204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin sulfate proteoglycan (obsolete GO:0005204)","synonyms":[{"name":"chondroitin sulfate proteoglycan","type":"exact"},{"name":"chondroitin sulphate proteoglycan","type":"exact"}],"termid":"GO:0005204"}


id: PBO:0086799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR220C is not an essential gene","termid":"PBO:0086799"}


id: PBO:0038844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 13","termid":"PBO:0038844"}


id: PBO:0052697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 5","termid":"PBO:0052697"}


id: GO:0007035
data:
  {"annotated_genes":["SJAG_01397","SJAG_00136","SJAG_00301","SJAG_01913","SJAG_00516","SJAG_00212","SJAG_02023","SJAG_05294","SJAG_04616","SJAG_01817","SJAG_03962","SJAG_04955"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70647,72446,72793,73803,78310,79900,87826,95444,95624,99817,101435,103703],"is_not":false,"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process that reduces the pH of the vacuole, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular pH reduction","termid":"GO:0051452"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00301":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_03962":null,"SJAG_04616":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vacuolar acidification","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0007035","terms_by_termid":{"GO:0007035":null}}


id: GO:0036399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a TCR signalosome.","definition_xrefs":["GOC:krc","PMID:22426112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"TCR signalosome assembly","synonyms":[{"name":"LAT signalosome assembly","type":"exact"},{"name":"linker for activation of T cells signalosome assembly","type":"exact"}],"termid":"GO:0036399"}


id: PBO:0061062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKAIN1 pseudogene 2","termid":"PBO:0061062"}


id: FYPO:0002741
data:
  {"alleles_by_uniquename":{"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a mitotic cell cycle process normally (i.e. indistinguishably from wild type). A mitotic cell cycle process is any of the processes that form part of the mitotic cell cycle, and thereby ensures successive accurate and complete genome replication and chromosome segregation.","definition_xrefs":["GO:1903047","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle","termid":"FYPO:0000411"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":1,"genotypes_by_uniquename":{"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic cell cycle process","references_by_uniquename":{"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta"],"termid":"FYPO:0002741","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001007":null}}


id: GO:0051456
data:
  {"annotated_genes":["SJAG_04508","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87658,93626],"is_not":false,"summary":null,"term":"GO:0051456"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis II. During meiosis II sister kinetochores are situated facing opposite spindle poles and bipolar attachment of the sister chromosomes to the spindle occurs.","definition_xrefs":["GOC:ai","GOC:clt","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of meiotic spindle microtubules to kinetochore","termid":"GO:0051316"},{"relation_name":"part_of","term_name":"meiotic metaphase II chromosome alignment","termid":"GO:0043061"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00678":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to meiosis II kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of meiotic spindle microtubules to kinetochore in meiosis II","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiosis II","type":"related"},{"name":"meiotic bipolar attachment","type":"related"}],"termid":"GO:0051456","terms_by_termid":{"GO:0051456":null}}


id: MONDO:0016553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital hypogonadotropic hypogonadism that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated congenital hypogonadotropic hypogonadism","secondary_identifiers":["ICD10CM:E23.0","GARD:20643","Orphanet:238666","MEDGEN:1842176","UMLS:C5679849"],"synonyms":[{"name":"nonsyndromic congenital hypogonadotropic hypogonadism","type":"exact"}],"termid":"MONDO:0016553","xrefs":{"Monarch":{"xref_id":"0016553"}}}


id: PBO:0028866
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mRNA_level_during_vegetative_growth","termid":"PBO:0028866"}


id: PR:O74172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2501 gene.","definition_xrefs":["UniProtKB:O74172","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.15","synonyms":[{"name":"S31-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps2501","type":"exact"}],"termid":"PR:O74172"}


id: PR:O94646
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.04","synonyms":[{"name":"Spom972h-med8","type":"exact"},{"name":"cell separation protein sep15 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mediator complex subunit 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94646"}


id: PBO:0080678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"whirlin","termid":"PBO:0080678"}


id: FYPO:0005096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle pole body for a longer time than normal during anaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein localization to mitotic spindle pole body","termid":"FYPO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic spindle pole body during anaphase","synonyms":[{"name":"increased duration of protein localisation to mitotic spindle pole body during anaphase","type":"exact"},{"name":"increased duration of protein localization to mitotic SPB during anaphase","type":"exact"},{"name":"increased duration of protein localization to spindle pole body during anaphase during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to spindle pole body during mitotic anaphase","type":"exact"},{"name":"prolonged protein localization to mitotic spindle pole body during anaphase","type":"exact"}],"termid":"FYPO:0005096"}


id: GO:0015755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fructose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"fructose transmembrane transport","synonyms":[{"name":"fructose transport","type":"related"}],"termid":"GO:0015755"}


id: PBO:0048482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 4","termid":"PBO:0048482"}


id: SO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for plastid LSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_rRNA_gene","termid":"SO:0002366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_LSU_rRNA_gene","synonyms":[{"name":"plastid large subunit rRNA gene","type":"exact"}],"termid":"SO:0002367"}


id: MONDO:1012566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal sequestra, non-human animal","termid":"MONDO:1012003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal sequestra, domestic cat","secondary_identifiers":["OMIA:002574-9685"],"termid":"MONDO:1012566","xrefs":{"Monarch":{"xref_id":"1012566"}}}


id: MOD:01942
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to D-aspartic acid.","definition_xrefs":["ChEBI:48094","PubMed:9384562","RESID:AA0190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartic acid","synonyms":[{"name":"(2R)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"D-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:01942"}


id: MONDO:1010894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in dogs due to a mutation in the CLN8 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, dog","termid":"MONDO:1011570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CLN8, dog","secondary_identifiers":["OMIA:001506-9615"],"synonyms":[{"name":"CLN8","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 8, dog","type":"related"}],"termid":"MONDO:1010894","xrefs":{"Monarch":{"xref_id":"1010894"}}}


id: PBO:0001647
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.130","termid":"PBO:0001647"}


id: GO:0102998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5-oxo-2-sulfonato-2,5-dihydrofuran-2-yl)acetate + H2O = maleylacetate + sulfite + 2 H+.","definition_xrefs":["EC:3.1.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"4-sulfomuconolactone hydrolase activity","secondary_identifiers":["RHEA:33711","UM-BBD_reactionID:r0583","MetaCyc:RXN-9733"],"termid":"GO:0102998"}


id: GO:0044496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process by which one organism decreases the force with which blood travels through the circulatory system of another organism.","definition_xrefs":["GOC:fj","PMID:19837656","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of blood pressure in another organism (obsolete GO:0044496)","synonyms":[{"name":"negative regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044496"}


id: GO:0046233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxyphenylacetate biosynthetic process (obsolete GO:0046233)","synonyms":[{"name":"3-hydroxyphenylacetate anabolism","type":"exact"},{"name":"3-hydroxyphenylacetate biosynthesis","type":"exact"},{"name":"3-hydroxyphenylacetate biosynthetic process","type":"exact"},{"name":"3-hydroxyphenylacetate formation","type":"exact"},{"name":"3-hydroxyphenylacetate synthesis","type":"exact"}],"termid":"GO:0046233"}


id: GO:0006129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-disulfide reduction (obsolete GO:0006129)","synonyms":[{"name":"protein-disulfide reduction","type":"exact"},{"name":"protein-disulphide reduction","type":"exact"}],"termid":"GO:0006129"}


id: PBO:0071853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 48","termid":"PBO:0071853"}


id: PBO:0109644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 10 like 2 (pseudogene)","termid":"PBO:0109644"}


id: GO:1990624
data:
  {"annotated_genes":["SJAG_02786","SJAG_03629"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91997,97027],"is_not":false,"summary":null,"term":"GO:1990624"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a guanyl nucleotide exchange factor.","definition_xrefs":["GOC:vw","PMID:25635048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02786":null,"SJAG_03629":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0004857","GO:0098772","GO:0140678","GO:0030234"],"is_obsolete":false,"name":"guanyl nucleotide exchange factor inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990624","terms_by_termid":{"GO:1990624":null}}


id: PBO:0065443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC2 pseudogene 2","termid":"PBO:0065443"}


id: PBO:0001392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycerol dehydrogenase Gld1","termid":"PBO:0001392"}


id: GO:0015154
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[75394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of disaccharide from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:jl","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transmembrane transporter activity","termid":"GO:0015157"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"disaccharide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015154","terms_by_termid":{"GO:0005364":null,"GO:0008506":null}}


id: PBO:0024481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, possible chaperone (predicted)","termid":"PBO:0024481"}


id: PBO:0003022
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forced sequence to give coding product","termid":"PBO:0003022"}


id: MONDO:0011973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc deficiency, transient neonatal","secondary_identifiers":["OMIM:608118","MESH:C564286","UMLS:C1842486","MEDGEN:330858"],"synonyms":[{"name":"TNZD","type":"related"},{"name":"zinc deficiency, neonatal, due to Low breast milk zinc","type":"related"},{"name":"zinc deficiency, transient neonatal","type":"exact"},{"name":"zinc in breast milk, reduced","type":"related"}],"termid":"MONDO:0011973","xrefs":{"Monarch":{"xref_id":"0011973"}}}


id: PBO:0046302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engrailed homeobox 2","termid":"PBO:0046302"}


id: MONDO:0020207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare isolated myopia is a rare, genetic, refraction anomaly disorder characterized by non-syndromic severe myopia, which may be associated with cataract and vitreoretinal degeneration (retinal detachment) that may lead to blindness.","definition_xrefs":["Orphanet:98619"],"gene_count":0,"genotype_count":0,"name":"obsolete rare isolated myopia (obsolete MONDO:0020207)","termid":"MONDO:0020207","xrefs":{"Monarch":{"xref_id":"0020207"}}}


id: FYPO:0002957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus","termid":"FYPO:0002956"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to nucleus during meiosis","synonyms":[{"name":"abnormal protein localisation to nucleus during meiosis","type":"exact"},{"name":"abnormal protein localization to nucleus during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002957"}


id: GO:0160004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ADP-ribosylation of the target protein.","definition_xrefs":["PMID:26673700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-D-ribose modification-dependent protein binding","termid":"GO:0160002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"poly-ADP-D-ribose modification-dependent protein binding","termid":"GO:0160004"}


id: GO:0090344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell aging (obsolete GO:0090344)","termid":"GO:0090344"}


id: MONDO:0014113
data:
  {"annotated_genes":["SJAG_02342","SJAG_01181","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84826,84827,84828],"is_not":false,"summary":null,"term":"MONDO:0014113"}]},"cv_name":"mondo","definition":"Any cardiofaciocutaneous syndrome in which the cause of the disease is a mutation in the MAP2K1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiofaciocutaneous syndrome","termid":"MONDO:0015280"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005267"],"is_obsolete":false,"name":"cardiofaciocutaneous syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111462","GARD:15936","MEDGEN:815336","OMIM:615279","UMLS:C3809006"],"synonyms":[{"name":"CFC3","type":"related"},{"name":"MAP2K1 cardiofaciocutaneous syndrome","type":"exact"},{"name":"cardiofaciocutaneous syndrome 3","type":"exact"},{"name":"cardiofaciocutaneous syndrome caused by mutation in MAP2K1","type":"exact"},{"name":"cardiofaciocutaneous syndrome type 3","type":"exact"}],"termid":"MONDO:0014113","terms_by_termid":{"MONDO:0014113":null},"xrefs":{"Monarch":{"xref_id":"0014113"}}}


id: PBO:0054592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1995","termid":"PBO:0054592"}


id: GO:0051028
data:
  {"annotated_genes":["SJAG_01185","SJAG_04202","SJAG_04115","SJAG_03283","SJAG_00093","SJAG_01065","SJAG_03593","SJAG_04148","SJAG_04536","SJAG_04379","SJAG_01715","SJAG_04310","SJAG_00178","SJAG_04656","SJAG_01529","SJAG_04347","SJAG_03847","SJAG_02704","SJAG_04480","SJAG_00641","SJAG_00992","SJAG_04645","SJAG_03300","SJAG_04589","SJAG_03986","SJAG_04360","SJAG_00471","SJAG_05328","SJAG_01374","SJAG_00298","SJAG_00375","SJAG_01083","SJAG_01584","SJAG_04472","SJAG_03693","SJAG_01449","SJAG_02209","SJAG_04017","SJAG_01467","SJAG_02425","SJAG_03002","SJAG_02534","SJAG_04721","SJAG_01652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58205,59789,64402],"is_not":false,"summary":null,"term":"GO:0051028"},{"annotations":[76484,80035,72416,100952,62307,89272,72658,73800,61061,117058,77348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[72961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[71246,110221,91990,101193,101661,74542,103736,102447,72956,77112,69571,115594,72836,80162,96744,110913,118721,117817,75569,114250,115847,116105,73389,73727,109652,107430,74185,74068,111542,96326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"}]},"cv_name":"biological_process","definition":"The directed movement of mRNA, messenger ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02425":null,"SJAG_02534":null,"SJAG_02704":null,"SJAG_03002":null,"SJAG_03283":null,"SJAG_03300":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04360":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mRNA transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0051028","terms_by_termid":{"GO:0006406":null,"GO:0016973":null,"GO:0031990":null,"GO:0051028":null}}


id: MONDO:0700117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complex movement disorder characterized by tremor, rigidity, bradykinesia, chorea, reduced facial expression, and Parkinsonism-dystonia. This disease is caused by loss of function variants in the SLC6A3 gene, which impair the dopamine transporter protein. The onset of this disease ranges from infancy to adulthood.","definition_xrefs":["PMID:24613933","PMID:28749637","PMID:21112253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A3-related dopamine transporter deficiency syndrome","secondary_identifiers":["DOID:0070487"],"synonyms":[{"name":"DTDS","type":"exact"},{"name":"Dopamine transporter deficiency syndrome","type":"exact"}],"termid":"MONDO:0700117","xrefs":{"Monarch":{"xref_id":"0700117"}}}


id: PBO:0002147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT hook protein","termid":"PBO:0002147"}


id: GO:0090689
data:
  {"annotated_genes":["SJAG_03915","SJAG_02572"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87778,91073],"is_not":false,"summary":null,"term":"GO:0090689"}]},"cv_name":"cellular_component","definition":"The 'trough' of the cleavage furrow. This is the part of the cleavage furrow closest to the contractile ring.","definition_xrefs":["PMID:27082518","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cleavage furrow","termid":"GO:0032154"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02572":null,"SJAG_03915":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cleavage furrow leading edge","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090689","terms_by_termid":{"GO:0090689":null}}


id: MOD:01927
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-glycosyltyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-glycosyl-L-tyrosine","synonyms":[{"name":"OGlycoTyr","type":"exact"}],"termid":"MOD:01927"}


id: MONDO:0013591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple epiphyseal dysplasia in which the cause of the disease is a mutation in the COL9A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia due to collagen 9 anomaly","termid":"MONDO:0015627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"epiphyseal dysplasia, multiple, 6","secondary_identifiers":["MEDGEN:436517","GARD:13376","UMLS:C2675767","OMIM:614135","DOID:0070301"],"synonyms":[{"name":"COL9A1 multiple epiphyseal dysplasia (disease)","type":"exact"},{"name":"EDM6","type":"related"},{"name":"epiphyseal dysplasia, multiple, 6","type":"exact"},{"name":"epiphyseal dysplasia, multiple, type 6","type":"exact"},{"name":"multiple epiphyseal dysplasia (disease) caused by mutation in COL9A1","type":"exact"},{"name":"multiple epiphyseal dysplasia 6","type":"related"}],"termid":"MONDO:0013591","xrefs":{"Monarch":{"xref_id":"0013591"}}}


id: PBO:0035931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bent_cell_during_G0_to_G1_transition","termid":"PBO:0035931"}


id: MONDO:0012954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 11","secondary_identifiers":["OMIM:612592","UMLS:C2675480","MEDGEN:390809"],"synonyms":[{"name":"CRCS11","type":"exact"},{"name":"colorectal cancer, susceptibility to, 11","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 20P","type":"related"}],"termid":"MONDO:0012954","xrefs":{"Monarch":{"xref_id":"0012954"}}}


id: GO:0042801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the addition of a phosphate group onto a serine or threonine residue in any member of the polo kinase class of proteins.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete polo kinase kinase activity (obsolete GO:0042801)","termid":"GO:0042801"}


id: PBO:0068858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 98, pseudogene","termid":"PBO:0068858"}


id: PBO:0073959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 8","termid":"PBO:0073959"}


id: PBO:0069175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 429, pseudogene","termid":"PBO:0069175"}


id: PBO:0069672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 949, pseudogene","termid":"PBO:0069672"}


id: GO:0140094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of cytoplasmic lattice of the the mammalian ooplasm.","definition_xrefs":["PMID:37922900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of cytoplasmic lattice","termid":"GO:0140094"}


id: MONDO:0016257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenosarcoma of the corpus uteri (obsolete MONDO:0016257)","termid":"MONDO:0016257","xrefs":{"Monarch":{"xref_id":"0016257"}}}


id: GO:0085006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via a symbiont-containing vacuole, a specialized sac within the host in which the symbiont resides. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by symbiont secreted substance released from symbiont-containing vacuole (obsolete GO:0085006)","synonyms":[{"name":"interaction with host mediated by symbiont secreted substance released from parasitophorous vacuole","type":"exact"}],"termid":"GO:0085006"}


id: PATO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000142 substance (obsolete PATO:0000142)","termid":"PATO:0000142"}


id: PBO:0065175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominin 1","termid":"PBO:0065175"}


id: PBO:0060902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal differentiation 1","termid":"PBO:0060902"}


id: PATO:0000753
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000753 spontaneous activity value (obsolete PATO:0000753)","termid":"PATO:0000753"}


id: MONDO:0007787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital generalized hypertrichosis, Ambras type is an extremely rare type of hypertrichosis lanuginosa congenita, a congenital skin disease, that is characterized by the presence of vellus-type hair on the entire body, especially on the face, ears and shoulders, with the exception of palms, soles, and mucous membranes. Facial and dental anomalies can also be observed, such as triangular, coarse face, bulbous nasal tip, long palpebral fissures, delayed tooth eruption and absence of teeth.","definition_xrefs":["Orphanet:1023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis lanuginosa congenita","termid":"MONDO:0016381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Ambras type hypertrichosis universalis congenita","secondary_identifiers":["MEDGEN:333542","OMIM:145701","GARD:8206","UMLS:C1840362","DOID:0111060"],"synonyms":[{"name":"Ambras syndrome","type":"exact"},{"name":"HTC 1","type":"related"},{"name":"HTC1","type":"exact"},{"name":"congenital generalised hypertrichosis, Ambras type","type":"related"},{"name":"congenital generalized hypertrichosis, Ambras type","type":"related"},{"name":"hypertrichosis universalis congenita Ambras type","type":"related"},{"name":"hypertrichosis universalis congenita, Ambras type","type":"related"},{"name":"hypertrichosis, congenital generalised","type":"related"},{"name":"hypertrichosis, congenital generalized","type":"related"}],"termid":"MONDO:0007787","xrefs":{"Monarch":{"xref_id":"0007787"}}}


id: GO:0015145
data:
  {"annotated_genes":["SJAG_03608","SJAG_00057","SJAG_03820"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005354"},{"annotations":[102779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015149"},{"annotations":[113967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[117007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a monosaccharide from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar transmembrane transporter activity","termid":"GO:0051119"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null,"SJAG_03820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"monosaccharide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015145","terms_by_termid":{"GO:0005354":null,"GO:0005358":null,"GO:0015149":null,"GO:0140108":null}}


id: PBO:0048161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 6","termid":"PBO:0048161"}


id: PBO:0076447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 3","termid":"PBO:0076447"}


id: GO:0018419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a protein structure comprising two or more rings that are interlocked but not covalently joined; resembling the links of a chain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"protein catenane formation","termid":"GO:0018419"}


id: PR:000059626
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inner kinetochore subunit cnp20 (Schizosaccharomyces pombe) that has not been phosphorylated on residues equivalent to Ser-3, Thr-8, Ser-12, Ser-13, Ser-14, Thr-21, Ser-23, Thr-29, Ser-31, Ser-33, Thr-36, Ser-39, Thr-43, and Thr-45 of the amino acid sequence represented by UniProtKB:Q9HGK9. Example: UniProtKB:Q9HGK9, Ser-3/Thr-8/Ser-12/Ser-13/Ser-14/Thr-21/Ser-23/Thr-29/Ser-31/Ser-33/Thr-36/Ser-39/Thr-43/Thr-45, PR:000026291.","definition_xrefs":["PomBase:VW","PMID:34810257","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cnp20/UnPhos-CIM","pombase_gene_id":"SPBC800.13","synonyms":[{"name":"Cnp20/UnPhos-CIM","type":"exact"},{"name":"PomBase_original_PRO_term_name: inner kinetochore subunit cnp20 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cnp20/UnPhos:1","type":"exact"},{"name":"UniProtKB:Q9HGK9, Ser-3/Thr-8/Ser-12/Ser-13/Ser-14/Thr-21/Ser-23/Thr-29/Ser-31/Ser-33/Thr-36/Ser-39/Thr-43/Thr-45, PR:000026291","type":"narrow"}],"termid":"PR:000059626"}


id: MONDO:0012830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"10q22.3q23.3 microdeletion syndrome is a rare partial autosomal monosomy characterized by a mild facial dysmorphism variably including macrocephaly, broad forehead, hypertelorism or hypotelorism, deep-set eyes, upslanting or downslanting palpebral fissures, low-set ears, flat nasal bridge, smooth philtrum, thin upper lip), cleft palate, cerebellar and cardiac malformations, psychomotor development delay, and behavioral abnormalities (attention deficit hyperactivity disorder, autism). Other rare features may include congenital breast aplasia, arachnodactyly, joint hyperlaxity, club feet, feeding difficulties, failure to thrive.","definition_xrefs":["Orphanet:276413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 10","termid":"MONDO:0016909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10q23 deletion syndrome","secondary_identifiers":["MEDGEN:906099","MESH:C567385","OMIM:612242","GARD:17280","UMLS:C4225669","DOID:0060389"],"synonyms":[{"name":"10q22.3q23 microdeletion syndrome","type":"related"},{"name":"10q22.3q23.3 microdeletion syndrome","type":"related"},{"name":"Del(10)(q22.3q23.3)","type":"exact"},{"name":"chromosome 10Q22.3-q23.2 deletion syndrome","type":"related"},{"name":"chromosome 10q22.3-q23.2 deletion syndrome","type":"related"},{"name":"chromosome 10q23 deletion syndrome","type":"exact"},{"name":"deletion 10q22.3q23.3","type":"exact"},{"name":"juvenile polyposis of infancy","type":"related"},{"name":"juvenile polyposis, infantile","type":"related"},{"name":"monosomy 10q22.3q23.3","type":"exact"}],"termid":"MONDO:0012830","xrefs":{"Monarch":{"xref_id":"0012830"}}}


id: MOD:01145
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to N-tau-(ADP-ribosyl)diphthamide.","definition_xrefs":["DeltaMass:0","ChEBI:82697"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"2'-[3-carboxamido-3-(trimethylammonio)propyl]-L-histidine","termid":"MOD:00049"},{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-tau-(ADP-ribosyl)diphthamide","synonyms":[{"name":"MOD_RES ADP-ribosyldiphthamide","type":"exact"}],"termid":"MOD:01145"}


id: GO:0004661
data:
  {"annotated_genes":["SJAG_04923","SJAG_03029","SJAG_04434","SJAG_03810"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73722,71099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004662"},{"annotations":[101204,73569,78666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004663"}]},"cv_name":"molecular_function","definition":"Catalysis of the covalent addition of a geranylgeranyl (20-carbon isoprenoid) group via thioether linkages to a cysteine residue at or near the C terminus of a protein.","definition_xrefs":["PMID:8621375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenyltransferase activity","termid":"GO:0008318"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03029":null,"SJAG_03810":null,"SJAG_04434":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein geranylgeranyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0018224","RHEA:21240"],"synonyms":[{"name":"protein-cysteine geranylgeranyltransferase activity","type":"exact"}],"termid":"GO:0004661","terms_by_termid":{"GO:0004662":null,"GO:0004663":null}}


id: PBO:0085119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; constituent of 66S pre-ribosomal particles; depletion leads to defects in rRNA processing and a block in the assembly of large ribosomal subunits; possesses a sigma(70)-like RNA-binding motif","termid":"PBO:0085119"}


id: GO:0106216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vesicle fusion with Golgi apparatus.","definition_xrefs":["GOC:se","PMID:26195667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106214"},{"relation_name":"positively_regulates","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106216"}


id: PBO:0044085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A5","termid":"PBO:0044085"}


id: PBO:0085391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane metalloid/H+ antiporter; member of bile/arsenite/riboflavin transporter (BART) superfamily; transports arsenite and antimonite; required for resistance to arsenic compounds; transcription is activated by Arr1p in the presence of arsenite; protein displays 10 transmembrane segments with cytoplasmically oriented N- and C-terminal domains","termid":"PBO:0085391"}


id: PBO:0044712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11","termid":"PBO:0044712"}


id: FYPO:0001485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to oxidative stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"},{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000298","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular response to oxidative stress","synonyms":[{"name":"normal cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal oxidative stress response","type":"exact"}],"termid":"FYPO:0001485"}


id: PBO:0003862
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy","termid":"PBO:0003862"}


id: GO:0034637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular carbohydrate biosynthetic process (obsolete GO:0034637)","termid":"GO:0034637"}


id: FYPO:0005688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, and morphology of astral microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytoplasmic microtubules during vegetative growth","termid":"FYPO:0001976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal astral microtubules","synonyms":[{"name":"normal astral microtubules during mitotic cell cycle","type":"related"},{"name":"normal astral microtubules during vegetative growth","type":"exact"},{"name":"normal cytoplasmic astral microtubules","type":"exact"}],"termid":"FYPO:0005688"}


id: MONDO:0005095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of inflammatory rheumatic diseases associated with arthritis and enthesitis, and often involving the axial skeleton. The most common form of spondyloarthritis is ankylosing spondylitis. Other forms include axial spondyloarthritis, peripheral spondyloarthritis, reactive arthritis, psoriatic arthritis/spondylitis and enteropathic arthritis/spondylitis.","definition_xrefs":["NCIT:C116778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"spondyloarthropathy","secondary_identifiers":["UMLS:C0949691","DOID:1123","SCTID:372109003","MESH:D055009","MEDGEN:181888","EFO:0000706","SCTID:8847002"],"synonyms":[{"name":"seronegative spondyloarthropathy","type":"exact"},{"name":"spondarthropathy","type":"exact"},{"name":"spondylarthropathy","type":"related"},{"name":"spondylarthrosis","type":"exact"},{"name":"spondyloarthritis","type":"exact"}],"termid":"MONDO:0005095","xrefs":{"Monarch":{"xref_id":"0005095"}}}


id: MONDO:0005580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Esophageal squamous cell carcinoma (ESCC) is a type of esophageal carcinoma (EC) that can affect any part of the esophagus, but is usually located in the upper or middle third.","definition_xrefs":["Orphanet:99977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"carcinoma of esophagus","termid":"MONDO:0019086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"esophageal squamous cell carcinoma","secondary_identifiers":["MEDGEN:124635","SCTID:276804009","UMLS:C0279626","EFO:0005922","MESH:C562729","NCIT:C4024","ONCOTREE:ESCC","DOID:3748","MESH:D000077277","GARD:18901","icd11.foundation:1417891145"],"synonyms":[{"name":"ESCC","type":"exact"},{"name":"esophageal epidermoid carcinoma","type":"exact"},{"name":"esophageal scc","type":"exact"},{"name":"esophageal squamous cell cancer","type":"exact"},{"name":"esophageal squamous cell carcinoma","type":"exact"},{"name":"esophagus scc","type":"exact"},{"name":"esophagus squamous cell carcinoma","type":"exact"},{"name":"oesophagus scc","type":"exact"},{"name":"oesophagus squamous cell carcinoma","type":"exact"},{"name":"scc of esophagus","type":"exact"},{"name":"scc of oesophagus","type":"exact"},{"name":"scc of the esophagus","type":"exact"},{"name":"scc of the oesophagus","type":"exact"},{"name":"squamous cell car. - esophagus","type":"exact"},{"name":"squamous cell car. - oesophagus","type":"exact"},{"name":"squamous cell carcinoma of esophagus","type":"exact"},{"name":"squamous cell carcinoma of oesophagus","type":"exact"},{"name":"squamous cell carcinoma of the esophagus","type":"exact"},{"name":"squamous cell carcinoma of the oesophagus","type":"exact"}],"termid":"MONDO:0005580","xrefs":{"Monarch":{"xref_id":"0005580"}}}


id: FYPO:0002010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein encoded by genes normally induced during iron ion starvation measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of iron ion starvation-induced proteins","synonyms":[{"name":"increased level of iron ion depletion-induced proteins","type":"exact"},{"name":"increased level of iron ion deprivation-induced proteins","type":"exact"},{"name":"increased level of iron ion starvation-induced proteins during mitotic cell cycle","type":"related"},{"name":"increased level of iron ion starvation-induced proteins during vegetative growth","type":"exact"},{"name":"increased level of proteins expressed during iron ion starvation","type":"exact"},{"name":"increased level of proteins induced by iron ion starvation","type":"exact"},{"name":"increased protein level of genes (normally) induced during iron starvation","type":"exact"}],"termid":"FYPO:0002010"}


id: GO:0141199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of GDP-mannose from glucose.","definition_xrefs":["PMID:21273394","PMID:9287314"],"gene_count":0,"genotype_count":0,"name":"obsolete GDP-mannose biosynthetic process from glucose (obsolete GO:0141199)","termid":"GO:0141199"}


id: PBO:0112591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltranstransferase/ geranyltranstransferase Fps1","termid":"PBO:0112591"}


id: PBO:0059120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPC1 divergent transcript","termid":"PBO:0059120"}


id: PBO:0012279
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase","termid":"PBO:0012279"}


id: PBO:0072770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein Z","termid":"PBO:0072770"}


id: PBO:0048221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate decarboxylase 2","termid":"PBO:0048221"}


id: PBO:0089887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein, claudin Dni1","termid":"PBO:0089887"}


id: MONDO:0003931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytoma that arises from the visual pathway and occurs during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"optic nerve astrocytoma","termid":"MONDO:0003234"},{"relation_name":"excluded_subClassOf","term_name":"childhood optic nerve glioma","termid":"MONDO:0003932"},{"relation_name":"is_a","term_name":"childhood cerebral astrocytoma","termid":"MONDO:0004071"},{"relation_name":"is_a","term_name":"optic tract astrocytoma","termid":"MONDO:0024649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood optic tract astrocytoma","secondary_identifiers":["MEDGEN:232072","DOID:6575","NCIT:C7534","UMLS:C1333014"],"synonyms":[{"name":"childhood optic tract astrocytoma","type":"exact"},{"name":"childhood visual pathway astrocytoma","type":"exact"},{"name":"optic tract astrocytoma of childhood","type":"exact"},{"name":"paediatric optic tract astrocytoma","type":"exact"},{"name":"paediatric visual pathway astrocytoma","type":"exact"},{"name":"pediatric optic tract astrocytoma","type":"exact"},{"name":"pediatric visual pathway astrocytoma","type":"exact"}],"termid":"MONDO:0003931","xrefs":{"Monarch":{"xref_id":"0003931"}}}


id: GO:0046653
data:
  {"annotated_genes":["SJAG_01466","SJAG_01198","SJAG_04156","SJAG_00815","SJAG_00106","SJAG_02225","SJAG_01126","SJAG_01766","SJAG_01616","SJAG_03275","SJAG_03914","SJAG_03712","SJAG_02408"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112205,108141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[60609,70828,57112,79574,105884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[76355,104587,61089,72327,70586,59459,71649,75640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrofolate, 5,6,7,8-tetrahydrofolic acid, a folate derivative bearing additional hydrogens on the pterin group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_01766":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_03712":null,"SJAG_03914":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrahydrofolate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"tetrahydrofolate metabolism","type":"exact"}],"termid":"GO:0046653","terms_by_termid":{"GO:0009257":null,"GO:0035999":null,"GO:0046654":null}}


id: MONDO:0001230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease of orbital part of eye adnexa","termid":"MONDO:0004751"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute orbital inflammation","secondary_identifiers":["ICD9:376.0","UMLS:C0155256","DOID:11230","ICD9:376.00","MEDGEN:509876","SCTID:20551005"],"synonyms":[{"name":"acute inflammation of orbit","type":"exact"}],"termid":"MONDO:0001230","xrefs":{"Monarch":{"xref_id":"0001230"}}}


id: PBO:0088865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleocytoplasmic transport chaperone Srp40","termid":"PBO:0088865"}


id: PBO:0067211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 277, pseudogene","termid":"PBO:0067211"}


id: GO:0015965
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015966"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diadenosine tetraphosphate, a derivative of the nucleoside adenosine with four phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"diadenosine tetraphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine tetraphosphate metabolism","type":"exact"}],"termid":"GO:0015965","terms_by_termid":{"GO:0015966":null}}


id: GO:0050477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-acyl-L-lysine = L-lysine + a carboxylate.","definition_xrefs":["EC:3.5.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"acyl-lysine deacylase activity","secondary_identifiers":["RHEA:24548","MetaCyc:ACYL-LYSINE-DEACYLASE-RXN"],"synonyms":[{"name":"6-N-acyl-L-lysine amidohydrolase activity","type":"related"},{"name":"N6-acyl-L-lysine amidohydrolase activity","type":"related"},{"name":"epsilon-lysine acylase activity","type":"related"}],"termid":"GO:0050477"}


id: PATO:0001788
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density which is higher relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"dense","termid":"PATO:0001164"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased mass density","synonyms":[{"name":"high density","type":"exact"}],"termid":"PATO:0001788"}


id: FYPO:0002079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing calcium ions during a cellular hypotonic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth on calcium","termid":"FYPO:0001020"},{"relation_name":"is_a","term_name":"normal growth during cellular response to osmotic stress","termid":"FYPO:0001021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on calcium during cellular hypotonic response","synonyms":[{"name":"normal cell population growth in presence of calcium ions during cellular hypotonic response","type":"exact"},{"name":"normal cell population growth on calcium during cellular hypotonic response","type":"exact"},{"name":"normal cell population growth on calcium ion during cellular hypoosmotic response","type":"exact"},{"name":"normal cell population growth on calcium ion during cellular hypotonic response","type":"exact"},{"name":"normal cell population growth on excess calcium during cellular hypotonic response","type":"exact"},{"name":"normal cellular response to calcium ion during cellular hypotonic response","type":"related"},{"name":"normal growth on calcium ion during cellular hypotonic response","type":"exact"},{"name":"normal vegetative cell population growth on calcium ion during cellular hypotonic response","type":"exact"}],"termid":"FYPO:0002079"}


id: PBO:0003893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase complex subunit (predicted)","termid":"PBO:0003893"}


id: MONDO:0010362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign form of phosphorylase kinase deficiency caused by variants in PHKA1, characterized by exercise intolerance, myalgia, muscle cramps, myoglobinuria, and progressive muscle weakness.","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease IXd","secondary_identifiers":["MESH:C564485","UMLS:C1845151","GARD:3858","MEDGEN:335112","DOID:0111040","NANDO:2201167","OMIM:300559","NANDO:1200830","Orphanet:715"],"synonyms":[{"name":"GSD IXd","type":"exact"},{"name":"GSD Vb","type":"related"},{"name":"GSD due to muscle phosphorylase kinase deficiency","type":"exact"},{"name":"GSD type 9D","type":"exact"},{"name":"GSD type IXd","type":"exact"},{"name":"GSD9D","type":"exact"},{"name":"PHKA1 glycogen storage disease","type":"exact"},{"name":"PHKA1-related glycogen storage disease type IX","type":"exact"},{"name":"glycogen storage disease caused by mutation in PHKA1","type":"exact"},{"name":"glycogen storage disease due to muscle phosphorylase kinase deficiency","type":"exact"},{"name":"glycogen storage disease type 9D","type":"exact"},{"name":"glycogen storage disease type IXd","type":"exact"},{"name":"glycogen storage disease, type IXd","type":"related"},{"name":"glycogenosis due to muscle phosphorylase kinase deficiency","type":"exact"},{"name":"glycogenosis type 9D","type":"exact"},{"name":"glycogenosis type IXd","type":"exact"},{"name":"muscle glycogenosis, X-linked","type":"related"},{"name":"muscle glycogenosis, X-linked recessive","type":"exact"},{"name":"muscle phosphorylase kinase deficiency","type":"exact"},{"name":"muscular phosphorylase kinase deficiency","type":"related"}],"termid":"MONDO:0010362","xrefs":{"Monarch":{"xref_id":"0010362"}}}


id: MOD:01549
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["Unimod:730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01549"}


id: PR:O74989
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pbi2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C338.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.12","synonyms":[{"name":"Spom972h-pbi2","type":"exact"}],"termid":"PR:O74989"}


id: SO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of chromosome variation where the chromosome complement is not an exact multiple of the haploid number as extra chromosomes are present.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid","termid":"SO:0000054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Hyperploid"],"termid":"SO:0000055"}


id: PBO:0082644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of RNA polymerase II general transcription factor TFIIH; involved in transcription initiation and in nucleotide-excision repair; relocalizes to the cytosol in response to hypoxia; homolog of Chlamydomonas reinhardtii REX1-S protein involved in DNA repair","termid":"PBO:0082644"}


id: PBO:0091174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BC10 family small membrane protein, unknown biological role, human BLCAP ortholog","termid":"PBO:0091174"}


id: PBO:0066420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REPIN1 antisense RNA 1","termid":"PBO:0066420"}


id: GO:1903926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bisphenol A stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22957036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to bisphenol A","termid":"GO:1903925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bisphenol A","termid":"GO:1903926"}


id: PBO:0038880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADCY6 divergent transcript","termid":"PBO:0038880"}


id: PBO:0078220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 10-1","termid":"PBO:0078220"}


id: GO:0097345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of the apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","GOC:pg","GOC:BHF","PMID:21041309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability involved in apoptotic process","termid":"GO:1902110"},{"relation_name":"part_of","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007005","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"mitochondrial outer membrane permeabilization","synonyms":[{"name":"MOMP","type":"exact"},{"name":"mitochondrial outer membrane permeabilization during apoptotic cell death","type":"broad"},{"name":"mitochondrion outer membrane permeabilization","type":"exact"}],"termid":"GO:0097345"}


id: GO:0003978
data:
  {"annotated_genes":["SJAG_02951","SJAG_01784","SJAG_03818"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70402,72431,73538],"is_not":false,"summary":null,"term":"GO:0003978"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose = UDP-galactose.","definition_xrefs":["EC:5.1.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01784":null,"SJAG_02951":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-glucose 4-epimerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:UDPGLUCEPIM-RXN","RHEA:22168","Reactome:R-HSA-5610036","Reactome:R-HSA-70369"],"synonyms":[{"name":"4-epimerase activity","type":"related"},{"name":"UDP-D-galactose 4-epimerase activity","type":"related"},{"name":"UDP-galactose 4-epimerase activity","type":"related"},{"name":"UDP-glucose epimerase activity","type":"related"},{"name":"UDPG-4-epimerase activity","type":"related"},{"name":"UDPgalactose 4-epimerase activity","type":"related"},{"name":"UDPglucose 4-epimerase activity","type":"related"},{"name":"galactowaldenase activity","type":"related"},{"name":"uridine diphosphate galactose 4-epimerase activity","type":"related"},{"name":"uridine diphosphate glucose 4-epimerase activity","type":"related"},{"name":"uridine diphospho-galactose-4-epimerase activity","type":"related"},{"name":"uridine diphosphoglucose 4-epimerase activity","type":"related"},{"name":"uridine diphosphoglucose epimerase activity","type":"related"}],"termid":"GO:0003978","terms_by_termid":{"GO:0003978":null}}


id: PBO:0016970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug162","termid":"PBO:0016970"}


id: PBO:0001900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase zeta catalytic subunit Rev3 (predicted)","termid":"PBO:0001900"}


id: GO:0071127
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to osteopontin.","definition_xrefs":["PMID:16005200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-osteopontin complex","synonyms":[{"name":"ITGA9-ITGB1-SPP1 complex","type":"narrow"}],"termid":"GO:0071127"}


id: PBO:0064617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 7","termid":"PBO:0064617"}


id: GO:1900015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytokine production involved in inflammatory response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"cytokine production involved in inflammatory response","termid":"GO:0002534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of cytokine production involved in inflammatory response","synonyms":[{"name":"regulation of cytokine production involved in acute inflammatory response","type":"narrow"}],"termid":"GO:1900015"}


id: GO:1900200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in metanephros development.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis","GOC:mtg_kidney_jan10","GOC:yaf","PMID:17314325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"},{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in metanephros development","synonyms":[{"name":"mesenchymal cell apoptosis involved in metanephros development","type":"narrow"}],"termid":"GO:1900200"}


id: FYPO:0007981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the distribution of lengths of interpolar microtubules in the mitotic spindle is abnormal during anaphase B.","definition_xrefs":["PomBase:mlr","PMID:15689489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000120","FYPO:0000054","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"abnormal interpolar microtubule length distribution during anaphase B","termid":"FYPO:0007981"}


id: PBO:0074144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B4","termid":"PBO:0074144"}


id: PBO:0043550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IV alpha 1 chain","termid":"PBO:0043550"}


id: GO:0039723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces a cytoplasmic pattern recognition receptor signaling pathway in a host organism by reducing the activity of a host serine/threonine kinase TBK1.","definition_xrefs":["PMID:34084167","PMID:22171259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of TBK1 activity","secondary_identifiers":["VZ:4477"],"synonyms":[{"name":"inhibition of host TBK1 by virus","type":"related"},{"name":"suppression by virus of host TBK1 activity","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of TBK1 activity","type":"narrow"},{"name":"symbiont-mediated suppression of host TKB signaling","type":"related"}],"termid":"GO:0039723"}


id: PBO:0013470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing protein Dbl6","termid":"PBO:0013470"}


id: GO:0021525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of lateral motor column neurons. Lateral motor column neurons are generated only on limb levels and send axons into the limb mesenchyme. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","PMID:11262869","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"},{"relation_name":"part_of","term_name":"somatic motor neuron differentiation","termid":"GO:0021523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral motor column neuron differentiation","termid":"GO:0021525"}


id: FYPO:0004915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the sequence of the telomeric repeating unit is normal (i.e. identical to that found in wild type).","definition_xrefs":["PMID:18157152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal telomeric repeat sequence","termid":"FYPO:0004915"}


id: MONDO:0010842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucocutaneous venous malformations (VMCMs) are hereditary vascular malformations characterized by the presence of small, multifocal, bluish-purple venous lesions involving the skin and mucosa.","definition_xrefs":["Orphanet:2451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"multiple cutaneous and mucosal venous malformations","secondary_identifiers":["MEDGEN:325026","MESH:C563977","DOID:0050792","GARD:16600","OMIM:600195","UMLS:C1838437","SCTID:699301008"],"synonyms":[{"name":"VENOUS malformations, multiple cutaneous and mucosal","type":"related"},{"name":"VMCM","type":"exact"},{"name":"Vmcm1","type":"related"},{"name":"cutaneous and mucosal venous malformation","type":"exact"},{"name":"mucocutaneous venous malformations","type":"related"}],"termid":"MONDO:0010842","xrefs":{"Monarch":{"xref_id":"0010842"}}}


id: GO:0006415
data:
  {"annotated_genes":["SJAG_00642","SJAG_00286","SJAG_03232","SJAG_02812","SJAG_05221","SJAG_02189","SJAG_03658","SJAG_03949","SJAG_00338","SJAG_01518","SJAG_04862","SJAG_05265","SJAG_02601","SJAG_00308","SJAG_01696","SJAG_04283","SJAG_02704"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61819,77356],"is_not":false,"summary":null,"term":"GO:0006415"},{"annotations":[73633,96272,108956,106972,94598,117292,108957,115821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002184"},{"annotations":[95291,101868,104503,98451,111316,95729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070126"},{"annotations":[65979,68357,76247],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045905"},{"annotations":[73736],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006449"}]},"cv_name":"biological_process","definition":"The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code).","definition_xrefs":["ISBN:019879276X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00308":null,"SJAG_00338":null,"SJAG_00642":null,"SJAG_01518":null,"SJAG_01696":null,"SJAG_02189":null,"SJAG_02601":null,"SJAG_02704":null,"SJAG_02812":null,"SJAG_03232":null,"SJAG_03658":null,"SJAG_03949":null,"SJAG_04283":null,"SJAG_04862":null,"SJAG_05221":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translational termination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0006456","GO:0006443","Reactome:R-HSA-72764"],"synonyms":[{"name":"protein synthesis termination","type":"broad"},{"name":"translation termination","type":"exact"},{"name":"translational complex disassembly","type":"exact"}],"termid":"GO:0006415","terms_by_termid":{"GO:0002184":null,"GO:0006415":null,"GO:0006449":null,"GO:0045905":null,"GO:0070126":null}}


id: PBO:0073211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 4C","termid":"PBO:0073211"}


id: MONDO:0060629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal recessive","secondary_identifiers":["UMLS:C4693325","EFO:0009300","OMIM:617820","MEDGEN:1646665"],"synonyms":[{"name":"NDHMSR","type":"related"},{"name":"neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal recessive","type":"exact"}],"termid":"MONDO:0060629","xrefs":{"Monarch":{"xref_id":"0060629"}}}


id: PBO:0002700
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possibly related to human/mouse periphilin","termid":"PBO:0002700"}


id: MONDO:0009633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"LTBP2-related ocular dysgenesis","termid":"MONDO:0100236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microspherophakia and/or megalocornea, with ectopia lentis and with or without secondary glaucoma","secondary_identifiers":["MEDGEN:761238","OMIM:251750","UMLS:C3538951"],"synonyms":[{"name":"MSPKA","type":"related"},{"name":"microspherophakia and/or megalocornea, with ectopia lentis and with or without secondary glaucoma","type":"exact"}],"termid":"MONDO:0009633","xrefs":{"Monarch":{"xref_id":"0009633"}}}


id: MONDO:0015403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-involuting congenital hemangioma (NICH) is a rare type of infantile hemangioma, which is a tumor that forms from the abnormal growth of blood vessels in the skin. NICH looks like an oval,purplish mark or bump that can occur on any part of the body. NICH is present from birth (congenital) and increases in size as the child grows. Unlike other hemangiomas, NICH do not disappear spontaneously (involute).","definition_xrefs":["GARD:0010890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hemangioma","termid":"MONDO:0018715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-involuting congenital hemangioma","secondary_identifiers":["SCTID:703295003","GARD:10890","NCIT:C172208","UMLS:C1275417","MEDGEN:698685","Orphanet:141179"],"synonyms":[{"name":"NICH","type":"exact"},{"name":"noninvoluting congenital hemangioma","type":"exact"}],"termid":"MONDO:0015403","xrefs":{"Monarch":{"xref_id":"0015403"}}}


id: GO:0070279
data:
  {"annotated_genes":["SJAG_00714","SJAG_00186","SJAG_00582","SJAG_03434","SJAG_01019","SJAG_04678","SJAG_03671","SJAG_03055","SJAG_03861","SJAG_03312","SJAG_04149","SJAG_00097","SJAG_03914","SJAG_00830","SJAG_03306","SJAG_02791","SJAG_02972","SJAG_04145","SJAG_00937","SJAG_04988","SJAG_03102","SJAG_02205","SJAG_01766","SJAG_00495","SJAG_02305","SJAG_05230","SJAG_00673","SJAG_04178","SJAG_00432","SJAG_03961"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61597,65295,57835,74036,79388,70319,68335,74216,57217,73193,64488,63413,64910,79167,110234,66157,67257,71778,65212,66065,65573,67753,67589,69570,72200,58233,68666,78105,60064,65867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030170"}]},"cv_name":"molecular_function","definition":"Binding to a vitamin B6 compound: pyridoxal, pyridoxamine, pyridoxine, or the active form, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00186":null,"SJAG_00432":null,"SJAG_00495":null,"SJAG_00582":null,"SJAG_00673":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00937":null,"SJAG_01019":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02305":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03055":null,"SJAG_03102":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03434":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_03961":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04178":null,"SJAG_04678":null,"SJAG_04988":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vitamin B6 binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070279","terms_by_termid":{"GO:0030170":null}}


id: PATO:0002029
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An osmolality which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"osmolality","termid":"PATO:0002027"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased osmolality","synonyms":[{"name":"high osmolality","type":"exact"}],"termid":"PATO:0002029"}


id: PBO:0038553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 8","termid":"PBO:0038553"}


id: GO:0033218
data:
  {"annotated_genes":["SJAG_01458","SJAG_04031","SJAG_05181","SJAG_00869","SJAG_03690","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097001"},{"annotations":[70227,99078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043295"},{"annotations":[75686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"},{"annotations":[59097,64728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031177"}]},"cv_name":"molecular_function","definition":"Binding to an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00869":null,"SJAG_01351":null,"SJAG_01458":null,"SJAG_03690":null,"SJAG_04031":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"amide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033218","terms_by_termid":{"GO:0031177":null,"GO:0036042":null,"GO:0043295":null,"GO:0097001":null}}


id: GO:1901338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catecholamine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"catecholamine binding","termid":"GO:1901338"}


id: MONDO:0007784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pituitary resistance to thyroid hormone is a rare, genetic thyroid disease, due to reduced pituitary gland responsiveness to thyroid hormone, characterized by mild to moderate hyperthyroidism in association with elevated circulating thyroid hormone levels, normal or elevated thyroid stimulating hormone, and no abnormalities of the pituitary gland on MRI. Patients present with diffuse large goiter, tachycardia, atrial fibrillation, weight loss and/or heat intolerance/perspiration, but no exophthalmos or anterior tibial mixedema.","definition_xrefs":["Orphanet:165994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid hormone resistance syndrome","termid":"MONDO:0001328"},{"relation_name":"is_a","term_name":"hyperthyroidism","termid":"MONDO:0004425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"selective pituitary resistance to thyroid hormone","secondary_identifiers":["icd11.foundation:482664523","MESH:C564154","OMIM:145650","UMLS:C1840364","DOID:0111374","MEDGEN:333543"],"synonyms":[{"name":"PRTH","type":"exact"},{"name":"hyperthyroidism, familial, due to inappropriate thyrotropin secretion","type":"related"},{"name":"pituitary resistance to thyroid hormone","type":"related"},{"name":"thyroid hormone resistance, selective pituitary","type":"related"}],"termid":"MONDO:0007784","xrefs":{"Monarch":{"xref_id":"0007784"}}}


id: PBO:0052995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMA5 antisense RNA 1","termid":"PBO:0052995"}


id: PATO:0002457
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a leaf.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leaf-like","termid":"PATO:0002457"}


id: GO:0006851
data:
  {"annotated_genes":["SJAG_03873","SJAG_03399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97147,95423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"}]},"cv_name":"biological_process","definition":"The process in which a calcium ion (Ca2+) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03399":null,"SJAG_03873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"mitochondrial calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8949215"],"synonyms":[{"name":"mitochondrial calcium transport","type":"exact"}],"termid":"GO:0006851","terms_by_termid":{"GO:0036444":null}}


id: PBO:0065697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio RNA binding family member 2","termid":"PBO:0065697"}


id: GO:1900466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of arginine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8455631","GOC:dgf","GOC:TermGenie","PMID:19233144"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900466)","synonyms":[{"name":"activation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900466"}


id: PR:Q9P780
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear protein localization protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03153","PANTHER:PTHR12710:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein localization protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.10c","secondary_identifiers":["UniProtKB:Q9P780"],"synonyms":[{"name":"Spom972h-NPLOC4","type":"exact"}],"termid":"PR:Q9P780"}


id: PBO:0082566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone required for correct maturation of the 20S proteasome; short-lived chaperone; may inhibit premature dimerization of proteasome half-mers; degraded by proteasome upon completion of its assembly","termid":"PBO:0082566"}


id: PATO:0000154
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000154 pain threshold (obsolete PATO:0000154)","termid":"PATO:0000154"}


id: PR:Q10097
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.18c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C11D3.18C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.18c","synonyms":[{"name":"Spom972h-SPAC11D3.18c","type":"exact"}],"termid":"PR:Q10097"}


id: PBO:0035714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035714"}


id: GO:0033395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-alanine via the intermediate 3-hydroxypropionate.","definition_xrefs":["MetaCyc:PWY-3941","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-alanine biosynthetic process","termid":"GO:0019483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"beta-alanine biosynthetic process via 3-hydroxypropionate","synonyms":[{"name":"beta-alanine anabolism via 3-hydroxypropionate","type":"exact"},{"name":"beta-alanine biosynthesis via 3-hydroxypropionate","type":"exact"},{"name":"beta-alanine formation via 3-hydroxypropionate","type":"exact"},{"name":"beta-alanine synthesis via 3-hydroxypropionate","type":"exact"}],"termid":"GO:0033395"}


id: FYPO:0002308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of IMP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal IMP binding","termid":"FYPO:0002308"}


id: FYECO:0000122
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition pertaining to the duration or frequency of one or more steps in a protocol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping growth timing","termid":"FYECO:0000122"}


id: PBO:0116404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein (FoldSeek), possible PF15874 family (Pfam-N), implicated in mRNA splicing ot RNA surveillance","termid":"PBO:0116404"}


id: GO:0061436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the epithelial barrier, the functional barrier in the skin that limits its permeability.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin epidermis development","termid":"GO:0098773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of skin barrier","synonyms":[{"name":"epithelial barrier development","type":"related"},{"name":"establishment of epithelial barrier","type":"broad"},{"name":"skin barrier development","type":"related"}],"termid":"GO:0061436"}


id: MONDO:1012410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined deficiency of factors IX and XII, non-human animal","termid":"MONDO:1011701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined deficiency of factors IX and XII, domestic cat","secondary_identifiers":["OMIA:001526-9685"],"termid":"MONDO:1012410","xrefs":{"Monarch":{"xref_id":"1012410"}}}


id: GO:0150111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transepithelial transport.","definition_xrefs":["GOC:aruk","PMID:27593915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"transepithelial transport","termid":"GO:0070633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of transepithelial transport","termid":"GO:0150111"}


id: MONDO:0000329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epidemic typhus (obsolete MONDO:0000329)","termid":"MONDO:0000329","xrefs":{"Monarch":{"xref_id":"0000329"}}}


id: PBO:0063062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase 2","termid":"PBO:0063062"}


id: PBO:0046421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPHA5 antisense RNA 1","termid":"PBO:0046421"}


id: FYPO:0006004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule organization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["GO:0031122","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal interphase microtubule organization","synonyms":[{"name":"normal cytoplasmic microtubule organization during interphase during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule organization during interphase of mitotic cell cycle","type":"exact"},{"name":"normal cytoplasmic microtubule organization during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubule organization","type":"exact"},{"name":"normal interphase microtubule organisation","type":"exact"}],"termid":"FYPO:0006004"}


id: PBO:0116555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp9, implicated in mRNA splicing","termid":"PBO:0116555"}


id: SO:0002137
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variable gene that rearranges at the DNA level and codes the variable region of the variable domain of aT-cell receptor chain.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_gene","termid":"SO:0002133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_V_Gene","synonyms":[{"name":"T_cell_receptor_V_gene","type":"exact"}],"termid":"SO:0002137"}


id: GO:0031382
data:
  {"annotated_genes":["SJAG_01993","SJAG_01794","SJAG_02989","SJAG_01943","SJAG_03453","SJAG_01894","SJAG_02700","SJAG_02379","SJAG_00514","SJAG_04509","SJAG_02864"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92309,98089,98781,88047,98699,114110],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[90641,111159,87685,93278,89656],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a cell projection in response to mating pheromone. This process is observed in unicellular fungi.","definition_xrefs":["GOC:mah","PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"},{"relation_name":"part_of","term_name":"cell morphogenesis involved in conjugation with cellular fusion","termid":"GO:0000753"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02379":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0000747"],"is_obsolete":false,"name":"mating projection formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mating projection assembly","type":"exact"},{"name":"mating projection biogenesis","type":"related"},{"name":"shmooing","type":"narrow"}],"termid":"GO:0031382","terms_by_termid":{"GO:1902917":null,"GO:1904600":null}}


id: PBO:0058923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIRLET7B host gene","termid":"PBO:0058923"}


id: PBO:0078929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 1-1","termid":"PBO:0078929"}


id: GO:1904324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inhibitory G protein-coupled receptor phosphorylation.","definition_xrefs":["GOC:TermGenie","PMID:15937517","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of inhibitory G protein-coupled receptor phosphorylation","termid":"GO:1904323"},{"relation_name":"negatively_regulates","term_name":"inhibitory G protein-coupled receptor phosphorylation","termid":"GO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"down regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"down-regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"downregulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"inhibition of inhibitory G-protein coupled receptor phosphorylation","type":"narrow"},{"name":"negative regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:1904324"}


id: GO:0050816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phosphorylated threonine residue within a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylated amino acid binding","termid":"GO:0045309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"phosphothreonine residue binding","synonyms":[{"name":"phosphothreonine binding","type":"related"}],"termid":"GO:0050816"}


id: PBO:0067051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 72, pseudogene","termid":"PBO:0067051"}


id: MONDO:0004648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A degenerative vascular disorder affecting the brain. It is caused by the blockage of the blood supply to the brain. It is manifested with decline of memory and cognitive functions.","definition_xrefs":["NCIT:C34525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dementia","termid":"MONDO:0001627"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"vascular dementia","secondary_identifiers":["UMLS:C0011269","DOID:8725","SCTID:429998004","MESH:D015140","EFO:0004718","ICD9:290.4","MEDGEN:41447"],"synonyms":[{"name":"multi infarct dementia","type":"narrow"},{"name":"multifocal dementia","type":"related"},{"name":"vascular dementia","type":"exact"}],"termid":"MONDO:0004648","xrefs":{"Monarch":{"xref_id":"0004648"}}}


id: PBO:0046520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroblast membrane associated protein (Scianna blood group)","termid":"PBO:0046520"}


id: GO:0140880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terrein, a fungal metabolite with ecological, antimicrobial, antiproliferative, and antioxidative activities.","definition_xrefs":["PMID:24816227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"terrein biosynthetic process","synonyms":[{"name":"terrein anabolism","type":"exact"},{"name":"terrein biosynthesis","type":"exact"},{"name":"terrein formation","type":"exact"},{"name":"terrein synthesis","type":"exact"}],"termid":"GO:0140880"}


id: PBO:0057349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 544a","termid":"PBO:0057349"}


id: PBO:0069966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1261, pseudogene","termid":"PBO:0069966"}


id: PBO:0049620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 23","termid":"PBO:0049620"}


id: MONDO:0019291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic dermis disorder (obsolete MONDO:0019291)","secondary_identifiers":["Orphanet:79377"],"synonyms":[{"name":"dermis disorder","type":"related"}],"termid":"MONDO:0019291","xrefs":{"Monarch":{"xref_id":"0019291"}}}


id: GO:0002904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte apoptotic process","termid":"GO:0070230"},{"relation_name":"positively_regulates","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell apoptotic process","synonyms":[{"name":"activation of B cell apoptosis","type":"narrow"},{"name":"positive regulation of B cell apoptosis","type":"narrow"},{"name":"stimulation of B cell apoptosis","type":"narrow"},{"name":"up regulation of B cell apoptosis","type":"exact"},{"name":"up-regulation of B cell apoptosis","type":"exact"},{"name":"upregulation of B cell apoptosis","type":"exact"}],"termid":"GO:0002904"}


id: GO:0061574
data:
  {"annotated_genes":["SJAG_05926","SJAG_00888"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75590,114141],"is_not":false,"summary":null,"term":"GO:0061574"}]},"cv_name":"cellular_component","definition":"A protein complex involved in regulation of mRNA processing and apoptosis. It binds to RNA in a sequence-independent manner and is recruited to the EJC prior to or during the splicing process. In humans the core proteins are RNPS1, SAP18 and ACIN1.","definition_xrefs":["PMID:16314458","PMID:22388736","PMID:12665594","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00888":null,"SJAG_05926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ASAP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0061574","terms_by_termid":{"GO:0061574":null}}


id: PBO:0070279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 20","termid":"PBO:0070279"}


id: PBO:0113111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eisosome core component involved in endocytosis; mitochondria phosphoprotein that localizes to the outer membrane and is involved in maintaining mitochondrial morphology and mitophagy; phosphorylated (T233) upon Pkc1p hyperactivation in a Slt2p MAPK-dependent fashion; null mutant shows activation of Pkc1p/Ypk1p stress resistance pathways; BAR domain family member; protein increases in abundance and relocalizes from the plasma membrane to cytoplasm upon DNA replication stress","termid":"PBO:0113111"}


id: PATO:0000659
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000659 temparature_quantity (obsolete PATO:0000659)","termid":"PATO:0000659"}


id: PBO:0054520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1920","termid":"PBO:0054520"}


id: PBO:0089452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-acetyltransferase E2, Lat1","termid":"PBO:0089452"}


id: GO:0047878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + erythritol = D-erythritol 4-phosphate + ADP + 2 H+.","definition_xrefs":["RHEA:20708","EC:2.7.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"erythritol kinase activity","secondary_identifiers":["KEGG_REACTION:R02430","MetaCyc:ERYTHRITOL-KINASE-RXN"],"synonyms":[{"name":"ATP:erythritol 4-phosphotransferase activity","type":"related"},{"name":"erythritol kinase (phosphorylating)","type":"related"}],"termid":"GO:0047878"}


id: GO:0006280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which genetic material undergoes a detectable and heritable structural change. There are three categories of mutation: genome mutations, involving addition or subtraction of one or more whole chromosomes; chromosome mutations, which alter the structure of chromosomes; and gene mutations, where the structure of a gene is altered at the molecular level.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete mutagenesis (obsolete GO:0006280)","synonyms":[{"name":"mutagenesis","type":"exact"}],"termid":"GO:0006280"}


id: GO:2001070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to starch.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"starch binding","synonyms":[{"name":"amidon binding","type":"related"},{"name":"amylum binding","type":"related"}],"termid":"GO:2001070"}


id: PBO:0087945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF1A; essential protein that forms a complex with Sui1p (eIF1) and 40S ribosomal subunit and scans for start codons; C-terminus associates with Fun12p (eIF5B); N terminus interacts with eIF2 and eIF3; ortholog of bacterial translation initiation factor IF1","termid":"PBO:0087945"}


id: PBO:0080067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 4","termid":"PBO:0080067"}


id: GO:1990737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of endoplasmic reticulum stress caused by a manganese stimulus.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:23934647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"},{"relation_name":"is_a","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to manganese-induced endoplasmic reticulum stress","synonyms":[{"name":"manganese-induced ER stress response","type":"exact"},{"name":"response to Mn-induced ER stress","type":"exact"},{"name":"response to manganese-induced ER stress","type":"exact"}],"termid":"GO:1990737"}


id: PBO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Rsd1 (predicted)","termid":"PBO:0002338"}


id: FYECO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which oleate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ oleate","termid":"FYECO:0000320"}


id: MONDO:0017408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare disorder that appears after the first year and a half of life in previously healthy children. It is characterized by rapid-onset weight gain, hypothalamic dysfunction, breathing abnormalities, and autonomic system dysregulation. The hypothalamic dysfunction manifestations include inability to maintain normal water balance, high prolactin levels, low thyroid, low cortisol, and early or late puberty. The breathing abnormalities include sleep apnea and alveolar hypoventilation, requiring ventilation support. The autonomic system dysregulation includes eye abnormalities, intestinal abnormalities, temperature dysregulation, and low heart rhythm. This disorder requires early recognition because it may lead to cardiorespiratory arrest. Up to 40% of the patients develop tumors of neural crest origin.","definition_xrefs":["NCIT:C121944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rapid-onset childhood obesity-hypothalamic dysfunction-hypoventilation-autonomic dysregulation syndrome","secondary_identifiers":["GARD:10407","NORD:1648","Orphanet:293987","MEDGEN:1670711","UMLS:C4751121"],"synonyms":[{"name":"ROHHAD","type":"exact"},{"name":"ROHHAD syndrome","type":"exact"},{"name":"ROHHADNET","type":"exact"},{"name":"Rapid-onset Obesity with Hypothalamic Dysfunction, Hypoventilation, and Autonomic Dysregulation","type":"exact"},{"name":"rapid-onset childhood obesity-hypothalamic dysfunction-hypoventilation-autonomic dysregulation-neural tumors syndrome","type":"exact"},{"name":"rapid-onset childhood obesity-hypothalamic dysfunction-hypoventilation-autonomic dysregulation-neural tumours syndrome","type":"exact"},{"name":"rapid-onset obesity with hypothalamic dysfunction, hypoventilation and autonomic dysregulation","type":"related"},{"name":"rapid-onset obesity with hypothalamic dysfunction, hypoventilation, and autonomic dysregulation","type":"exact"},{"name":"rapid-onset obesity with hypothalamic dysfunction, hypoventilation, and autonomic dysregulation syndrome","type":"exact"}],"termid":"MONDO:0017408","xrefs":{"Monarch":{"xref_id":"0017408"}}}


id: PBO:0027247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_polyadenylated_25S_rRNA_level","termid":"PBO:0027247"}


id: PBO:0029105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_valine_level","termid":"PBO:0029105"}


id: GO:0034494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the microneme membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"microneme","termid":"GO:0020009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microneme lumen","termid":"GO:0034494"}


id: MONDO:0017640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cyanide-induced parkinsonism is a rare parkinsonian syndrome due to intoxication which develops in individuals surviving an acute cyanide intoxication episode or due to chronic exposure to small cyanide doses. It presents several weeks after acute exposure with progressive typical clinical features of parkinsonism including bradykinesia, rigidity, dystonia, hypomimia, hypokinetic dysarthria, postural instability and retropulsion but no resting or postural tremor. Brain MRI reveals bilateral lesions in the pallidum, posterior putamen, substantia nigra, subthalamic nucleus, temporal and occipital cortex, and cerebellum.","definition_xrefs":["Orphanet:306692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"},{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanide-induced parkinsonism","secondary_identifiers":["GARD:21266","icd11.foundation:1717111858","UMLS:C4707859","MEDGEN:1639789","SCTID:766872002"],"termid":"MONDO:0017640","xrefs":{"Monarch":{"xref_id":"0017640"}}}


id: PBO:0073723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signaling lymphocytic activation molecule family member 1","termid":"PBO:0073723"}


id: GO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic dynein heavy chain (obsolete GO:0001687)","synonyms":[{"name":"cytoplasmic dynein heavy chain","type":"exact"}],"termid":"GO:0001687"}


id: PBO:0086461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metalloprotease of the mitochondrial inner membrane; required for processing of Atp6p; has an additional role in assembly of the F0 sector of the F1F0 ATP synthase complex; substrate of the Mia40p-Erv1p disulfide relay system, and folding is assisted by Mia40p","termid":"PBO:0086461"}


id: GO:0021829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oligodendrocytes from the subpallium to the cerebral cortex during forebrain development.","definition_xrefs":["GOC:dph","GOC:cls","PMID:12626695","GO_REF:0000021","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-independent telencephalic tangential migration","termid":"GO:0021826"},{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte cell migration from the subpallium to the cortex","termid":"GO:0021829"}


id: MONDO:0850150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A kidney disease that is located in the kidney cortex.","definition_xrefs":["DOID:0080616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney cortex disease","termid":"MONDO:0850150","xrefs":{"Monarch":{"xref_id":"0850150"}}}


id: PR:000050547
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the pxl1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC4F6.12","termid":"PR:000050547"}


id: MONDO:0007935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominantly inherited cystoid macular edema manifesting with macular atrophy, strabismus and, sometimes, pericentral retinitis pigmentosa. It is associated with a poor visual prognosis.","definition_xrefs":["Orphanet:75381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macular retinal edema","termid":"MONDO:0003005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cystoid macular edema","secondary_identifiers":["OMIM:153880","GARD:16694","MEDGEN:7435","ICD10CM:H35.5","NCIT:C34794","SCTID:312921000","DOID:4447","UMLS:C0024440"],"synonyms":[{"name":"DCMD","type":"exact"},{"name":"Mddc","type":"related"},{"name":"autosomal dominant cystoid macular edema","type":"exact"},{"name":"autosomal dominant cystoid macular oedema","type":"exact"},{"name":"cystoid macular dystrophy","type":"related"},{"name":"familial macular edema","type":"exact"},{"name":"familial macular oedema","type":"exact"},{"name":"macular dystrophy, dominant cystoid","type":"related"},{"name":"macular edema, cystoid","type":"related"}],"termid":"MONDO:0007935","xrefs":{"Monarch":{"xref_id":"0007935"}}}


id: MONDO:0008036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myasthenia gravis","termid":"MONDO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"myasthenia, limb-girdle, autoimmune","secondary_identifiers":["MESH:C563552","OMIM:159400","UMLS:C1834635","MEDGEN:331795"],"synonyms":[{"name":"myasthenia gravis, limb-girdle","type":"related"},{"name":"myasthenia, limb-girdle, autoimmune","type":"exact"}],"termid":"MONDO:0008036","xrefs":{"Monarch":{"xref_id":"0008036"}}}


id: PBO:0035722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_processing_during_vegetative_growth","termid":"PBO:0035722"}


id: GO:0098866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fusion of the membrane of a multivesicular body with the apical plasma membrane, resulting in release of exosomes from the cell.","definition_xrefs":["PMID:26459596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion to plasma membrane","termid":"GO:0099500"},{"relation_name":"part_of","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"multivesicular body fusion to apical plasma membrane","termid":"GO:0098866"}


id: MONDO:0002440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that is caused by excess erythropoietin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired secondary polycythemia","termid":"MONDO:0016541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"erythropoietin polycythemia","secondary_identifiers":["NCIT:C35434","DOID:2839","MEDGEN:98214","SCTID:367328005","UMLS:C0391869"],"synonyms":[{"name":"nephrogenous polycythemia","type":"exact"},{"name":"polycythaemia due to Excess erythropoetin production","type":"exact"},{"name":"polycythemia due to excess erythopoetin production","type":"exact"},{"name":"polycythemia, nephrogenous","type":"exact"},{"name":"secondary polycythemia with excess erythropoietin","type":"exact"}],"termid":"MONDO:0002440","xrefs":{"Monarch":{"xref_id":"0002440"}}}


id: GO:0099031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic density membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic density membrane (obsolete GO:0099031)","termid":"GO:0099031"}


id: PBO:0028667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0028667"}


id: MONDO:0015345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Perioral myoclonia with absences is a rare epilepsy syndrome characterized by absence seizures with perioral myoclonia as the main seizure type, accompanied by generalized tonic-clonic seizures, appearing before or together with absences. Consciousness is usually impaired, although to variable degree. Commonly observed absence status epilepticus, poor response to antiepileptic drugs and persistence of seizures into adulthood, in the presence of normal neurological status and intelligence, are additional clinical features of this syndrome.","definition_xrefs":["Orphanet:139426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"perioral myoclonia with absences","secondary_identifiers":["GARD:19915","MEDGEN:1637328","UMLS:C4707846","icd11.foundation:1067045592","SCTID:766815007"],"synonyms":[{"name":"POMA","type":"exact"}],"termid":"MONDO:0015345","xrefs":{"Monarch":{"xref_id":"0015345"}}}


id: FYPO:0008083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the endoplasmic reticulum is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal reticulophagy","termid":"FYPO:0008083"}


id: MONDO:0018267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined dystonia","termid":"MONDO:0020065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"combined cervical dystonia","secondary_identifiers":["Orphanet:370114"],"termid":"MONDO:0018267","xrefs":{"Monarch":{"xref_id":"0018267"}}}


id: GO:0042465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a cell or organism in response to a stimulus in which the rate of movement depends on the intensity (rather than the direction) of the stimulus.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kinesis","secondary_identifiers":["Wikipedia:Kinesis"],"termid":"GO:0042465"}


id: GO:2000831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of steroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of steroid hormone secretion","termid":"GO:2000831"}


id: MONDO:0013199
data:
  {"annotated_genes":["SJAG_00289","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86262,86263],"is_not":false,"summary":null,"term":"MONDO:0013199"}]},"cv_name":"mondo","definition":"Tuberous sclerosis mapped to chromosome 16p13.3 (TSC2 gene).","definition_xrefs":["NCIT:C75331"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete tuberous sclerosis complex (obsolete MONDO:0019341)","termid":"MONDO:0019341"},{"relation_name":"is_a","term_name":"tuberous sclerosis","termid":"MONDO:0001734"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"tuberous sclerosis 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:348170","DOID:0080325","MESH:C566021","OMIM:613254","UMLS:C1860707","GARD:15640"],"synonyms":[{"name":"TSC2","type":"related"},{"name":"TSC2 Angiomyolipomas, renal, modifier of","type":"related"},{"name":"tuberous sclerosis 2","type":"exact"},{"name":"tuberous sclerosis type 2","type":"exact"},{"name":"tuberous sclerosis, type 2","type":"related"},{"name":"tuberous sclerosis-2","type":"exact"}],"termid":"MONDO:0013199","terms_by_termid":{"MONDO:0013199":null},"xrefs":{"Monarch":{"xref_id":"0013199"}}}


id: PBO:0088422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv25","termid":"PBO:0088422"}


id: GO:0048380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lateral mesoderm cell fate specification.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate specification","termid":"GO:0042662"},{"relation_name":"is_a","term_name":"regulation of lateral mesodermal cell fate specification","termid":"GO:0048378"},{"relation_name":"negatively_regulates","term_name":"lateral mesodermal cell fate specification","termid":"GO:0048377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lateral mesodermal cell fate specification","synonyms":[{"name":"down regulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"downregulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"inhibition of lateral mesodermal cell fate specification","type":"narrow"},{"name":"negative regulation of lateral plate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048380"}


id: PBO:0062134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 1 pseudogene","termid":"PBO:0062134"}


id: PBO:0030995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_stress_during_vegetative_growth","termid":"PBO:0030995"}


id: MONDO:0859212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder, nonprogressive, with spasticity and transient opisthotonus","secondary_identifiers":["OMIM:619653","MEDGEN:1794250","UMLS:C5562040"],"termid":"MONDO:0859212","xrefs":{"Monarch":{"xref_id":"0859212"}}}


id: GO:0009656
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Pigment-protein complex primarily associated to PSII in plants, green algae and cyanobacteria. Involved in state transitions that cause migration to PSI under certain environmental conditions such as high light.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"PSII associated light-harvesting complex II","termid":"GO:0009517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II, peripheral complex","termid":"GO:0009656"}


id: PBO:0071380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 3","termid":"PBO:0071380"}


id: PBO:0087506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of HDA1 histone deacetylase complex; tetrameric trichostatin A-sensitive class II histone deacetylase complex contains Hda1p homodimer and an Hda2p-Hda3p heterodimer; involved in telomere maintenance; Hda2p relocalizes to cytosol in response to hypoxia; other members of the HDA1 histone deacetylase complex, which regulates aging through trehalose metabolism, are Hda1p and Hda3p","termid":"PBO:0087506"}


id: MONDO:0003215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the apocrine sweat gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"sweat gland cancer","termid":"MONDO:0002206"},{"relation_name":"is_a","term_name":"apocrine sweat gland neoplasm","termid":"MONDO:0003686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"apocrine sweat gland cancer","secondary_identifiers":["DOID:4934","NCIT:C6800","MEDGEN:277327","UMLS:C1334561"],"synonyms":[{"name":"apocrine sweat gland cancer","type":"exact"},{"name":"cancer of apocrine sweat gland","type":"exact"},{"name":"malignant apocrine neoplasm","type":"exact"},{"name":"malignant apocrine neoplasm of skin","type":"exact"},{"name":"malignant apocrine neoplasm of the skin","type":"exact"},{"name":"malignant apocrine skin neoplasm","type":"exact"},{"name":"malignant apocrine skin tumor","type":"exact"},{"name":"malignant apocrine skin tumour","type":"exact"},{"name":"malignant apocrine sweat gland neoplasm","type":"exact"},{"name":"malignant apocrine tumor","type":"exact"},{"name":"malignant apocrine tumor of skin","type":"exact"},{"name":"malignant apocrine tumor of the skin","type":"exact"},{"name":"malignant apocrine tumour","type":"exact"},{"name":"malignant apocrine tumour of skin","type":"exact"},{"name":"malignant apocrine tumour of the skin","type":"exact"},{"name":"malignant neoplasm of apocrine sweat gland","type":"exact"}],"termid":"MONDO:0003215","xrefs":{"Monarch":{"xref_id":"0003215"}}}


id: FYPO:0007374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of histones in centromeric regions is abnormal. All histone methylation may be affected, or methylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone methylation at centromere during vegetative growth","synonyms":[{"name":"abnormal centromeric histone methylation during vegetative growth","type":"exact"},{"name":"abnormal histone methylation at centromere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007374"}


id: PR:Q9UUE3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17G9.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUE3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine N-acyltransferase C17G9.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.06c","synonyms":[{"name":"Spom972h-SPBC17G9.06c","type":"exact"}],"termid":"PR:Q9UUE3"}


id: PBO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CuSE 5'-[ACT]T[ACT]NNGCTG[AGT]-3'","termid":"PBO:0000339"}


id: PBO:0065261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 23 domain containing 2","termid":"PBO:0065261"}


id: PBO:0038555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 17B, depalmitoylase","termid":"PBO:0038555"}


id: GO:0006573
data:
  {"annotated_genes":["SJAG_04149","SJAG_06635","SJAG_00396","SJAG_00944","SJAG_02496","SJAG_04098","SJAG_03985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902114"},{"annotations":[58595,75911,79763,63848,76627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009099"},{"annotations":[72707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving valine, 2-amino-3-methylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_00944":null,"SJAG_02496":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"valine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"valine metabolism","type":"exact"}],"termid":"GO:0006573","terms_by_termid":{"GO:0006574":null,"GO:0009099":null,"GO:1902114":null}}


id: GO:0071241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inorganic substance stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to inorganic substance (obsolete GO:0071241)","termid":"GO:0071241"}


id: PBO:0067879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 181","termid":"PBO:0067879"}


id: GO:0009202
data:
  {"annotated_genes":["SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a deoxyribonucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate biosynthetic process","termid":"GO:0009142"},{"relation_name":"is_a","term_name":"deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside triphosphate anabolism","type":"exact"},{"name":"deoxyribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"deoxyribonucleoside triphosphate formation","type":"exact"},{"name":"deoxyribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009202","terms_by_termid":{"GO:0009216":null}}


id: PBO:0074008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 9","termid":"PBO:0074008"}


id: MONDO:0859382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 50 with or without glaucoma","secondary_identifiers":["OMIM:620253","UMLS:C5830299","MEDGEN:1840935"],"termid":"MONDO:0859382","xrefs":{"Monarch":{"xref_id":"0859382"}}}


id: SO:0001627
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant occurring within an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:intronic","type":"related"},{"name":"Jannovar:intron_variant","type":"exact"},{"name":"Seattleseq:intron","type":"exact"},{"name":"Seattleseq:intron-near-splice","type":"related"},{"name":"VAAST:intron_variant","type":"exact"},{"name":"VEP:intron_variant","type":"exact"},{"name":"intron variant","type":"exact"},{"name":"intron_","type":"exact"},{"name":"intronic","type":"exact"},{"name":"snpEff:INTRON","type":"exact"}],"termid":"SO:0001627"}


id: MONDO:1012893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in dogs due to a mutation in the KRT1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, dog","termid":"MONDO:1012978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, KRT1-related, dog","secondary_identifiers":["OMIA:002425-9615"],"synonyms":[{"name":"non-epidermolytic ichthyosis, dog","type":"related"}],"termid":"MONDO:1012893","xrefs":{"Monarch":{"xref_id":"1012893"}}}


id: GO:0046626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of insulin receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"insulin receptor signaling pathway","termid":"GO:0008286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of insulin receptor signaling pathway","synonyms":[{"name":"regulation of insulin receptor signalling pathway","type":"exact"}],"termid":"GO:0046626"}


id: PBO:0066751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 49","termid":"PBO:0066751"}


id: GO:1902674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a right posteriolateral flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["GOC:TermGenie","ISBN:9780124260207","GOC:giardia","PMID:5961344","GO_REF:0000064","PMID:16607022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"right posteriolateral flagellum","termid":"GO:0097557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"right posteriolateral basal body","synonyms":[{"name":"cilial basal body of right posteriolateral cilium","type":"exact"},{"name":"cilial basal body of right posteriolateral flagellum","type":"exact"},{"name":"cilial basal body of right posterolateral cilium","type":"exact"},{"name":"cilial basal body of right posterolateral flagellum","type":"exact"},{"name":"ciliary basal body of right posteriolateral cilium","type":"exact"},{"name":"ciliary basal body of right posteriolateral flagellum","type":"exact"},{"name":"ciliary basal body of right posterolateral cilium","type":"exact"},{"name":"ciliary basal body of right posterolateral flagellum","type":"exact"},{"name":"cilium basal body of right posteriolateral cilium","type":"exact"},{"name":"cilium basal body of right posteriolateral flagellum","type":"exact"},{"name":"cilium basal body of right posterolateral cilium","type":"exact"},{"name":"cilium basal body of right posterolateral flagellum","type":"exact"},{"name":"microtubule basal body of right posteriolateral cilium","type":"exact"},{"name":"microtubule basal body of right posteriolateral flagellum","type":"exact"},{"name":"microtubule basal body of right posterolateral cilium","type":"exact"},{"name":"microtubule basal body of right posterolateral flagellum","type":"exact"},{"name":"right posteriolateral flagellum ciliary basal body","type":"exact"}],"termid":"GO:1902674"}


id: PBO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap130 (predicted)","termid":"PBO:0002329"}


id: PBO:0071368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 27","termid":"PBO:0071368"}


id: PBO:0028665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_processing","termid":"PBO:0028665"}


id: PBO:0068068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 373","termid":"PBO:0068068"}


id: GO:0004258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a C-terminal amino acid with a broad specificity.","definition_xrefs":["EC:3.4.16.5"],"gene_count":0,"genotype_count":0,"name":"obsolete vacuolar carboxypeptidase Y (obsolete GO:0004258)","synonyms":[{"name":"vacuolar carboxypeptidase Y","type":"exact"}],"termid":"GO:0004258"}


id: MONDO:0021166
data:
  {"annotated_genes":["SJAG_03703","SJAG_01756","SJAG_03994","SJAG_04109","SJAG_04743","SJAG_03363","SJAG_05979","SJAG_02431","SJAG_03850","SJAG_00856"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[85864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"},{"annotations":[86330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"},{"annotations":[84865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"},{"annotations":[85942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013898"},{"annotations":[85145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010939"},{"annotations":[87053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009624"},{"annotations":[85052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014592"},{"annotations":[85069,85068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011577"}]},"cv_name":"mondo","definition":"A disease involving a pathogenic inflammatory response in the anatomical structure.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01756":null,"SJAG_02431":null,"SJAG_03363":null,"SJAG_03703":null,"SJAG_03850":null,"SJAG_03994":null,"SJAG_04109":null,"SJAG_04743":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"inflammatory disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C93210","ICD9:799.89","MEDGEN:452939","UMLS:C1290884","SCTID:128139000"],"synonyms":[{"name":"anatomical structure inflammation","type":"exact"},{"name":"inflammation of anatomical structure","type":"exact"},{"name":"inflammatory disease","type":"exact"},{"name":"inflammatory disorder","type":"exact"}],"termid":"MONDO:0021166","terms_by_termid":{"MONDO:0008218":null,"MONDO:0008296":null,"MONDO:0009624":null,"MONDO:0010600":null,"MONDO:0010939":null,"MONDO:0011577":null,"MONDO:0013898":null,"MONDO:0014592":null,"MONDO:0800029":null},"xrefs":{"Monarch":{"xref_id":"0021166"}}}


id: PBO:0085702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in RNA splicing by the spliceosome; component of a complex containing Cef1p; interacts genetically with ISY1 and BUD13; may bind RNA; has similarity to S. pombe Cwf21p","termid":"PBO:0085702"}


id: PBO:0066811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 110","termid":"PBO:0066811"}


id: PBO:0069431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 696, pseudogene","termid":"PBO:0069431"}


id: MONDO:0015785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Prader-Willi syndrome","termid":"MONDO:0008300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"Prader-Willi syndrome due to translocation","secondary_identifiers":["UMLS:C5680509","MEDGEN:1826085","Orphanet:177907","GARD:17074"],"termid":"MONDO:0015785","xrefs":{"Monarch":{"xref_id":"0015785"}}}


id: MONDO:0019186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection caused by Coxiella burnetii. It is transmitted to humans by the inhalation of infected air particles or contact with fluids and feces of infected animals. Signs and symptoms include the abrupt onset of fever, headache, myalgias, and weakness.","definition_xrefs":["NCIT:C34970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Q fever","secondary_identifiers":["SCTID:186788009","DOID:11100","EFO:0005224","ICD10CM:A78","ICD9:083.0","MedDRA:10037688","MEDGEN:48290","MESH:D011778","UMLS:C0034362","MedDRA:10037731","GARD:7515","icd11.foundation:2113860626","Orphanet:781","NORD:1643"],"synonyms":[{"name":"Coxiella burnetii caused disease or disorder","type":"exact"},{"name":"Coxiella burnetii disease or disorder","type":"exact"},{"name":"Coxiella burnetii fever","type":"related"},{"name":"Coxiella burnetii infectious disease","type":"exact"},{"name":"Coxiellosis","type":"exact"},{"name":"Q fever pneumonia","type":"related"},{"name":"infection due to Coxiella burnetii","type":"exact"},{"name":"nine Mile fever","type":"exact"},{"name":"quadrilateral fever","type":"exact"},{"name":"query fever","type":"exact"}],"termid":"MONDO:0019186","xrefs":{"Monarch":{"xref_id":"0019186"}}}


id: FYPO:0000213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which vesicle-mediated transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vesicle-mediated transport during vegetative growth","synonyms":[{"name":"abnormal vesicle-mediated protein transport during vegetative growth","type":"narrow"},{"name":"abnormal vesicle-mediated transport during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000213"}


id: PBO:0043051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHP1 pseudogene 1","termid":"PBO:0043051"}


id: FYPO:0000966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000965"},{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000966"}


id: PBO:0059875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 12","termid":"PBO:0059875"}


id: MONDO:0017100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neutropenia-monocytopenia-deafness syndrome is characterized by neutropenia with myeloid marrow hypoplasia, monocytopenia, and congenital deafness. It has been described in three siblings who suffered recurrent bacterial infections.","definition_xrefs":["Orphanet:2690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"neutropenia-monocytopenia-deafness syndrome","secondary_identifiers":["GARD:3982","UMLS:C4518430","MEDGEN:1383523"],"termid":"MONDO:0017100","xrefs":{"Monarch":{"xref_id":"0017100"}}}


id: MONDO:0019242
data:
  {"annotated_genes":["SJAG_03290","SJAG_04149","SJAG_02433","SJAG_00944","SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009603"},{"annotations":[86078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[85320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100058"},{"annotations":[84923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014057"},{"annotations":[85012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of branched-chain amino acid metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00944":null,"SJAG_02433":null,"SJAG_03069":null,"SJAG_03290":null,"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"inborn disorder of branched-chain amino acid metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79197","GARD:18971","SCTID:116020001","UMLS:C0342712","MEDGEN:87452","icd11.foundation:5456505"],"synonyms":[{"name":"branched chain amino acid metabolism disorder","type":"related"},{"name":"disorder of branched chain amino acid metabolism","type":"related"},{"name":"disorder of branched-chain amino acid metabolism","type":"exact"},{"name":"inborn branched-chain amino acid metabolic process disorder","type":"exact"},{"name":"inborn disorder of branched-chain amino acid metabolism","type":"exact"},{"name":"inborn error of branched-chain amino acid metabolic process","type":"exact"},{"name":"rare inborn error of branched-chain amino acid metabolic process","type":"exact"}],"termid":"MONDO:0019242","terms_by_termid":{"MONDO:0009529":null,"MONDO:0009603":null,"MONDO:0009666":null,"MONDO:0014057":null,"MONDO:0100058":null},"xrefs":{"Monarch":{"xref_id":"0019242"}}}


id: PBO:0005875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15S rRNA","termid":"PBO:0005875"}


id: GO:0140413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: zinc(out) + HCO3-(out) + HO3Se-(out) = zinc(in) + HCO3-(in) + HO3Se-(out).","definition_xrefs":["PMID:27166256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"zinc:bicarbonate symporter activity","termid":"GO:0140412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"zinc:bicarbonate:selenite symporter activity","synonyms":[{"name":"zinc:hydrogencarbonate:selenate symporter activity","type":"exact"}],"termid":"GO:0140413"}


id: MONDO:0003958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immature teratoma that arises from the central nervous system and occurs during childhood.","definition_xrefs":["NCIT:C27405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system immature teratoma","termid":"MONDO:0003735"},{"relation_name":"is_a","term_name":"childhood central nervous system germ cell tumor","termid":"MONDO:0003750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood central nervous system immature teratoma","secondary_identifiers":["UMLS:C1332954","DOID:6654","MEDGEN:232344"],"synonyms":[{"name":"central nervous system immature teratoma of childhood","type":"exact"},{"name":"childhood central nervous system immature teratoma","type":"exact"},{"name":"paediatric central nervous system immature teratoma","type":"exact"},{"name":"pediatric central nervous system immature teratoma","type":"exact"}],"termid":"MONDO:0003958","xrefs":{"Monarch":{"xref_id":"0003958"}}}


id: MONDO:0006226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade, indolent B-cell lymphoma, usually associated with Helicobacter pylori infection. Morphologically it is characterized by a dense mucosal atypical lymphocytic (centrocyte-like cell) infiltrate with often prominent lymphoepithelial lesions and plasmacytic differentiation. Approximately 40% of gastric MALT lymphomas carry the t(11;18)(q21;q21). Such cases are resistant to Helicobacter pylori therapy.","definition_xrefs":["NCIT:C5266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spleen cancer","termid":"MONDO:0005966"},{"relation_name":"is_a","term_name":"MALT lymphoma","termid":"MONDO:0007650"},{"relation_name":"is_a","term_name":"hereditary gastric cancer","termid":"MONDO:0018502"},{"relation_name":"is_a","term_name":"gastric non-hodgkin lymphoma","termid":"MONDO:0042493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"gastric mucosa-associated lymphoid tissue lymphoma","secondary_identifiers":["MEDGEN:232547","UMLS:C1333782","EFO:1000274"],"synonyms":[{"name":"MALT lymphoma of stomach","type":"exact"},{"name":"MALT lymphoma of the stomach","type":"exact"},{"name":"MALToma of stomach","type":"exact"},{"name":"MALToma of the stomach","type":"exact"},{"name":"gastric MALT lymphoma","type":"exact"},{"name":"gastric MALToma","type":"exact"},{"name":"gastric mucosa-associated lymphoid tissue lymphoma","type":"exact"},{"name":"primary MALT lymphoma of stomach","type":"exact"},{"name":"primary MALT lymphoma of the stomach","type":"exact"},{"name":"primary gastric B-cell MALT lymphoma","type":"exact"},{"name":"primary gastric MALT lymphoma","type":"exact"},{"name":"stomach MALT lymphoma","type":"exact"}],"termid":"MONDO:0006226","xrefs":{"Monarch":{"xref_id":"0006226"}}}


id: PR:Q92342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F8.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.04c","synonyms":[{"name":"Spom972h-SPAC1F8.04c","type":"exact"}],"termid":"PR:Q92342"}


id: GO:0016616
data:
  {"annotated_genes":["SJAG_01414","SJAG_01012","SJAG_04972","SJAG_00281","SJAG_01543","SJAG_00502","SJAG_04376","SJAG_02855","SJAG_02297","SJAG_03370","SJAG_03235","SJAG_03804","SJAG_00409","SJAG_03098","SJAG_03198","SJAG_04048","SJAG_03821","SJAG_00240","SJAG_00593","SJAG_01753","SJAG_00630","SJAG_00491","SJAG_01869","SJAG_03958","SJAG_02963","SJAG_02148","SJAG_03562","SJAG_02696","SJAG_00038","SJAG_03152","SJAG_03715","SJAG_00337","SJAG_02313","SJAG_02488","SJAG_03852","SJAG_00396","SJAG_02010","SJAG_01457","SJAG_05033","SJAG_00242","SJAG_01036","SJAG_03822","SJAG_04660","SJAG_01137","SJAG_04362","SJAG_02960","SJAG_01298","SJAG_00237","SJAG_03196","SJAG_02176","SJAG_01432"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68081,70226,103722],"is_not":false,"summary":null,"term":"GO:0016616"},{"annotations":[70593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000253"},{"annotations":[109880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000252"},{"annotations":[72599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047560"},{"annotations":[74482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003862"},{"annotations":[96963,58355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004316"},{"annotations":[65679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008703"},{"annotations":[71172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000140"},{"annotations":[70938,77953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004022"},{"annotations":[77381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008106"},{"annotations":[78419,72704,75824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004033"},{"annotations":[91608,74050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004032"},{"annotations":[80148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008720"},{"annotations":[100984,95545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032866"},{"annotations":[104854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046526"},{"annotations":[98531,114409,98530,114408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120542"},{"annotations":[118243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047935"},{"annotations":[62466,67958,59644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004345"},{"annotations":[88396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008888"},{"annotations":[68834,62728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141152"},{"annotations":[75079,74933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030267"},{"annotations":[79969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004399"},{"annotations":[70485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047046"},{"annotations":[70890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004412"},{"annotations":[71527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004420"},{"annotations":[74934,75080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016618"},{"annotations":[74829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003938"},{"annotations":[91611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047018"},{"annotations":[91612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047019"},{"annotations":[73640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004450"},{"annotations":[76628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004455"},{"annotations":[100985,95546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032867"},{"annotations":[72470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003939"},{"annotations":[73828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030060"},{"annotations":[73069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004471"},{"annotations":[104851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043892"},{"annotations":[80156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004616"},{"annotations":[64715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004617"},{"annotations":[114181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050236"},{"annotations":[103273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106322"},{"annotations":[103274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106321"},{"annotations":[103275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080007"},{"annotations":[108323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004757"},{"annotations":[59856],"is_not":false,"rel_names":["is_a"],"sum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of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.","definition_xrefs":["EC:1.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00038":null,"SJAG_00237":null,"SJAG_00240":null,"SJAG_00242":null,"SJAG_00281":null,"SJAG_00337":null,"SJAG_00396":null,"SJAG_00409":null,"SJAG_00491":null,"SJAG_00502":null,"SJAG_00593":null,"SJAG_00630":null,"SJAG_01012":null,"SJAG_01036":null,"SJAG_01137":null,"SJAG_01298":null,"SJAG_01414":null,"SJAG_01432":null,"SJAG_01457":null,"SJAG_01543":null,"SJAG_01753":null,"SJAG_01869":null,"SJAG_02010":null,"SJAG_02148":null,"SJAG_02176":null,"SJAG_02297":null,"SJAG_02313":null,"SJAG_02488":null,"SJAG_02696":null,"SJAG_02855":null,"SJAG_02960":null,"SJAG_02963":null,"SJAG_03098":null,"SJAG_03152":null,"SJAG_03196":null,"SJAG_03198":null,"SJAG_03235":null,"SJAG_03370":null,"SJAG_03562":null,"SJAG_03715":null,"SJAG_03804":null,"SJAG_03821":null,"SJAG_03822":null,"SJAG_03852":null,"SJAG_03958":null,"SJAG_04048":null,"SJAG_04362":null,"SJAG_04376":null,"SJAG_04660":null,"SJAG_04972":null,"SJAG_05033":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-975629","Reactome:R-HSA-9027625","Reactome:R-HSA-9027631","Reactome:R-HSA-9027632"],"termid":"GO:0016616","terms_by_termid":{"GO:0000140":null,"GO:0000252":null,"GO:0000253":null,"GO:0003862":null,"GO:0003938":null,"GO:0003939":null,"GO:0004022":null,"GO:0004032":null,"GO:0004033":null,"GO:0004316":null,"GO:0004345":null,"GO:0004399":null,"GO:0004412":null,"GO:0004420":null,"GO:0004450":null,"GO:0004455":null,"GO:0004471":null,"GO:0004616":null,"GO:0004617":null,"GO:0004757":null,"GO:0004764":null,"GO:0008106":null,"GO:0008703":null,"GO:0008720":null,"GO:0008888":null,"GO:0016616":null,"GO:0016618":null,"GO:0030060":null,"GO:0030267":null,"GO:0032866":null,"GO:0032867":null,"GO:0043892":null,"GO:0046526":null,"GO:0047018":null,"GO:0047019":null,"GO:0047046":null,"GO:0047560":null,"GO:0047935":null,"GO:0050236":null,"GO:0080007":null,"GO:0106321":null,"GO:0106322":null,"GO:0120542":null,"GO:0141040":null,"GO:0141152":null}}


id: MONDO:0013324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphedema-posterior choanal atresia syndrome","secondary_identifiers":["GARD:16898","ICD10CM:Q82.0","MEDGEN:462225","OMIM:613611","Orphanet:99141","UMLS:C3150875"],"synonyms":[{"name":"CATLPH","type":"related"},{"name":"choanal atresia and lymphedema","type":"related"}],"termid":"MONDO:0013324","xrefs":{"Monarch":{"xref_id":"0013324"}}}


id: PBO:0036021
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_recombination_at_rDNA","termid":"PBO:0036021"}


id: GO:1990248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of DNA damage.","definition_xrefs":["PMID:15660129"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to DNA damage (obsolete GO:1990248)","termid":"GO:1990248"}


id: FYPO:0006947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during glucose starvation","synonyms":[{"name":"ectopic protein localization to cytoplasm during glucose starvation","type":"exact"},{"name":"protein mislocalised to cytoplasm during glucose starvation","type":"exact"},{"name":"protein mislocalized to cytoplasm during glucose depletion","type":"exact"},{"name":"protein mislocalized to cytoplasm during glucose deprivation","type":"exact"}],"termid":"FYPO:0006947"}


id: PATO:0001853
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of cerebral spinal fluid.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"edematous","termid":"PATO:0001450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalic","termid":"PATO:0001853"}


id: PBO:0059417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 3","termid":"PBO:0059417"}


id: MONDO:0015336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformation syndrome with odontal and/or periodontal component (obsolete MONDO:0015336)","secondary_identifiers":["Orphanet:139042"],"termid":"MONDO:0015336","xrefs":{"Monarch":{"xref_id":"0015336"}}}


id: PBO:0072983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schwannomin interacting protein 1","termid":"PBO:0072983"}


id: MONDO:1010278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent Mullerian duct syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent Mullerian duct syndrome, non-human animal","secondary_identifiers":["OMIA:000791"],"termid":"MONDO:1010278","xrefs":{"Monarch":{"xref_id":"1010278"}}}


id: GO:0140619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases a DNA strand exchange activity.","definition_xrefs":["PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"DNA strand exchange activator activity","termid":"GO:0140619"}


id: PBO:0079329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 17A","termid":"PBO:0079329"}


id: PBO:0051541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6 receptor","termid":"PBO:0051541"}


id: GO:1904698
data:
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id: PBO:0043901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein 1","termid":"PBO:0043901"}


id: PBO:0044195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin D","termid":"PBO:0044195"}


id: MONDO:0032685
data:
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id: MONDO:0019506
data:
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id: FYPO:0000114
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id: GO:0075243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which male and female gametangia develop and fuse to form an oospore, a thick-walled resting spore of Oomycetes and certain algae and fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"oospore formation","termid":"GO:0075243"}


id: SO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the three_prime_coding_exon that codes for protein.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_region_of_exon","termid":"SO:0001215"},{"relation_name":"part_of","term_name":"three_prime_coding_exon","termid":"SO:0000202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon_coding_region","synonyms":[{"name":"three prime exon coding region","type":"exact"}],"termid":"SO:0000197"}


id: GO:0002586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"regulation of peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002586"}


id: MONDO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tungiasis (obsolete MONDO:0000300)","termid":"MONDO:0000300","xrefs":{"Monarch":{"xref_id":"0000300"}}}


id: PBO:0046566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 8, envelope","termid":"PBO:0046566"}


id: MONDO:0017594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"indolent B-cell non-Hodgkin lymphoma","secondary_identifiers":["Orphanet:300842","UMLS:C5419078","NCIT:C171299","GARD:21244","MEDGEN:1741600"],"synonyms":[{"name":"B cell lymphoma, indolent","type":"related"},{"name":"indolent B cell lymphoma","type":"related"},{"name":"indolent B-cell NHL","type":"exact"}],"termid":"MONDO:0017594","xrefs":{"Monarch":{"xref_id":"0017594"}}}


id: MONDO:0004498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that arises from the meninges of the sacral region of the spinal cord.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraspinal meningioma","termid":"MONDO:0001279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sacral spinal canal and spinal cord meningioma","secondary_identifiers":["NCIT:C5299","MEDGEN:277626","DOID:8203","UMLS:C1335893"],"synonyms":[{"name":"meningioma of sacral spinal canal and spinal cord","type":"exact"},{"name":"meningioma of the sacral spinal canal and spinal cord","type":"exact"},{"name":"sacral intraspinal meningioma","type":"exact"}],"termid":"MONDO:0004498","xrefs":{"Monarch":{"xref_id":"0004498"}}}


id: PBO:0114419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIF family member 2","termid":"PBO:0114419"}


id: GO:1904028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collagen fibril organization.","definition_xrefs":["PMID:25451920","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"is_a","term_name":"positive regulation of extracellular matrix organization","termid":"GO:1903055"},{"relation_name":"is_a","term_name":"regulation of collagen fibril organization","termid":"GO:1904026"},{"relation_name":"positively_regulates","term_name":"collagen fibril organization","termid":"GO:0030199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collagen fibril organization","synonyms":[{"name":"activation of collagen fibril organisation","type":"narrow"},{"name":"activation of collagen fibril organization","type":"narrow"},{"name":"activation of fibrillar collagen organization","type":"narrow"},{"name":"positive regulation of collagen fibril organisation","type":"exact"},{"name":"positive regulation of fibrillar collagen organization","type":"exact"},{"name":"up regulation of collagen fibril organisation","type":"exact"},{"name":"up regulation of collagen fibril organization","type":"exact"},{"name":"up regulation of fibrillar collagen organization","type":"exact"},{"name":"up-regulation of collagen fibril organisation","type":"exact"},{"name":"up-regulation of collagen fibril organization","type":"exact"},{"name":"up-regulation of fibrillar collagen organization","type":"exact"},{"name":"upregulation of collagen fibril organisation","type":"exact"},{"name":"upregulation of collagen fibril organization","type":"exact"},{"name":"upregulation of fibrillar collagen organization","type":"exact"}],"termid":"GO:1904028"}


id: PR:P40373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP phosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01785","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.05c","secondary_identifiers":["UniProtKB:P40373"],"synonyms":[{"name":"ATP-PRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-PRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hisG","type":"exact"}],"termid":"PR:P40373"}


id: GO:0018726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-phenanthrol + X-SO3(-) = HX + 9-phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-phenanthrol sulfotransferase activity (obsolete GO:0018726)","synonyms":[{"name":"9-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018726"}


id: GO:0052157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a microbe-associated molecular pattern, and by which a symbiont modulates the frequency, rate or extent of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of microbe-associated molecular pattern-induced host innate immune response (obsolete GO:0052157)","synonyms":[{"name":"modulation by organism of microbe-associated molecular pattern-induced innate immune response in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of microbe-associated molecular pattern-induced host innate immunity","type":"exact"},{"name":"modulation by symbiont of pathogen-associated molecular pattern-induced host innate immunity","type":"narrow"}],"termid":"GO:0052157"}


id: MOD:00113
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-geranylgeranyl-L-cysteine.","definition_xrefs":["PubMed:1483450","RESID:AA0104","Unimod:48#C","DeltaMass:0","OMSSA:49","PubMed:15609361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"geranylgeranylated residue","termid":"MOD:00441"},{"relation_name":"is_a","term_name":"isoprenylated cysteine","termid":"MOD:01110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155","MOD:00905"],"is_obsolete":false,"name":"S-geranylgeranyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2E,6E,10Z)-12-hydroxy-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]sulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(3,7,11,15-tetramethyl-2,6,10,14-hexadecatetraenylthio)propanoic acid","type":"exact"},{"name":"Geranyl-geranyl","type":"related"},{"name":"GeranylGeranyl","type":"related"},{"name":"LIPID S-geranylgeranyl cysteine","type":"exact"},{"name":"S-geranylgeranyl","type":"exact"},{"name":"S-geranylgeranyl-L-cysteine","type":"exact"},{"name":"SGergerCys","type":"exact"},{"name":"geranylgeranylc","type":"exact"}],"termid":"MOD:00113"}


id: PBO:0051154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-33-2 (pseudogene)","termid":"PBO:0051154"}


id: SO:0001835
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Extra nucleotides inserted between rearranged immunoglobulin segments.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N_region","synonyms":[{"name":"INSDC_feature:N_region","type":"exact"},{"name":"N-region","type":"exact"}],"termid":"SO:0001835"}


id: MONDO:0005051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating lobular adenocarcinoma of the breast. The malignant cells lack cohesion and are arranged individually or in a linear manner (Indian files), or as narrow trabeculae within the stroma. The malignant cells are usually smaller than those of ductal carcinoma, are less pleomorphic, and have fewer mitotic figures.","definition_xrefs":["NCIT:C7950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast lobular carcinoma","termid":"MONDO:0000552"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"invasive lobular breast carcinoma","secondary_identifiers":["EFO:0000553","MEDGEN:75994","ONCOTREE:ILC","DOID:3457","UMLS:C0279565"],"synonyms":[{"name":"breast invasive lobular carcinoma","type":"related"},{"name":"classic invasive lobular carcinoma","type":"exact"},{"name":"infiltrating lobular adenocarcinoma","type":"exact"},{"name":"infiltrating lobular breast carcinoma","type":"exact"},{"name":"infiltrating lobular carcinoma of breast","type":"exact"},{"name":"infiltrating lobular carcinoma of the breast","type":"exact"},{"name":"invasive lobular adenocarcinoma","type":"exact"},{"name":"invasive lobular breast carcinoma","type":"exact"},{"name":"invasive lobular carcinoma","type":"exact"},{"name":"invasive lobular carcinoma of breast","type":"exact"},{"name":"invasive lobular carcinoma of the breast","type":"exact"},{"name":"invasive lobular carcinoma, classic type","type":"exact"},{"name":"lobular carcinoma","type":"broad"},{"name":"lobular carcinoma (morphologic abnormality)","type":"broad"},{"name":"lobular carcinoma NOS (morphologic abnormality)","type":"broad"},{"name":"lobular carcinoma of the breast","type":"broad"}],"termid":"MONDO:0005051","xrefs":{"Monarch":{"xref_id":"0005051"}}}


id: MONDO:0001163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an enduring pattern of behavior based on the pervasive belief that the motives of others are malevolent and that they should not be trusted.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"personality disorder","termid":"MONDO:0002028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paranoid personality disorder","secondary_identifiers":["MEDGEN:45321","SCTID:13601005","ICD9:301.0","NCIT:C92630","icd11.foundation:1066693864","MESH:D010260","DOID:10938","ICD10CM:F60.0","UMLS:C0030477"],"termid":"MONDO:0001163","xrefs":{"Monarch":{"xref_id":"0001163"}}}


id: GO:1900117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"execution phase of apoptosis","termid":"GO:0097194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of execution phase of apoptosis","termid":"GO:1900117"}


id: PBO:0082759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SF3b subcomplex of the U2 snRNP; essential protein required for splicing and for assembly of SF3b","termid":"PBO:0082759"}


id: MONDO:0026989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome associated with hypertrophic cardiomyopathy (obsolete MONDO:0026989)","secondary_identifiers":["Orphanet:217595"],"termid":"MONDO:0026989","xrefs":{"Monarch":{"xref_id":"0026989"}}}


id: FYPO:0008333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ribosome hibernation is normal (i.e. indistinguishable from wild type) during glucose starvation.","definition_xrefs":["PMID:39379376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal ribosome hibernation during glucose starvation","termid":"FYPO:0008333"}


id: PBO:0005849
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.11","termid":"PBO:0005849"}


id: PBO:0061872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte expressed protein","termid":"PBO:0061872"}


id: PBO:0034497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_topoisomerase-DNA_adduct_level","termid":"PBO:0034497"}


id: MONDO:0100538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"dysplasminogenemia","secondary_identifiers":["UMLS:C4225445","MEDGEN:904685"],"termid":"MONDO:0100538","xrefs":{"Monarch":{"xref_id":"0100538"}}}


id: PBO:0028677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K14_acetylation_at_centromere_outer_repeat","termid":"PBO:0028677"}


id: PBO:0048083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 4","termid":"PBO:0048083"}


id: PBO:0041742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin regulated spectrin associated protein family member 3","termid":"PBO:0041742"}


id: _global:directly_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p directly regulates q iff p is immediately causally upstream of q and p regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"immediately_causally_upstream_of","termid":"_global:immediately_causally_upstream_of"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulates","secondary_identifiers":["RO:0002578"],"termid":"_global:directly_regulates"}


id: PBO:0058229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4519","termid":"PBO:0058229"}


id: FYPO:0007677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of sterols in cellular membranes is abnormal.","definition_xrefs":["PomBase:mah","PMID:32320462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal membrane lipid distribution","termid":"FYPO:0006545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal sterol distribution","termid":"FYPO:0007677"}


id: GO:1905126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axo-dendritic protein transport.","definition_xrefs":["PMID:20694152","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"axo-dendritic protein transport","termid":"GO:0099640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of axo-dendritic protein transport","synonyms":[{"name":"regulation of axonal protein transport","type":"narrow"}],"termid":"GO:1905126"}


id: PBO:0069032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 277, pseudogene","termid":"PBO:0069032"}


id: FYPO:0000532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic cell cycle arrest in response to pheromone is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest in response to pheromone","termid":"FYPO:0000530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitotic cell cycle arrest in response to pheromone","synonyms":[{"name":"decreased pheromone-induced mitotic cell cycle arrest","type":"exact"},{"name":"pheromone-induced cell cycle arrest: decreased","type":"related"},{"name":"reduced mitotic cell cycle arrest in response to pheromone","type":"exact"}],"termid":"FYPO:0000532"}


id: GO:1990446
data:
  {"annotated_genes":["SJAG_04914","SJAG_02558"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70126,113644],"is_not":false,"summary":null,"term":"GO:1990446"}]},"cv_name":"molecular_function","definition":"Binding to a U1 small nuclear ribonucleoprotein particle.","definition_xrefs":["PMID:14713954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNP binding","termid":"GO:0070990"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02558":null,"SJAG_04914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"U1 snRNP binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990446","terms_by_termid":{"GO:1990446":null}}


id: SO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including more than one V-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_cluster","synonyms":[{"name":"V cluster","type":"exact"},{"name":"V-CLUSTER","type":"exact"}],"termid":"SO:0000526"}


id: GO:0010550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the chemical reactions and pathways resulting in the breakdown of one or more components of the light-harvesting complex of photosystem II.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"regulates","term_name":"PSII associated light-harvesting complex II catabolic process","termid":"GO:0010304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of PSII associated light-harvesting complex II catabolic process","synonyms":[{"name":"regulation of LHCII catabolism","type":"exact"},{"name":"regulation of LHCII degradation","type":"exact"}],"termid":"GO:0010550"}


id: PBO:0081197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIM2 antisense RNA 1","termid":"PBO:0081197"}


id: GO:0098647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A supramolecular assembly of collagen trimers with a 'beads on a string'-like structure.","definition_xrefs":["PMID:19693541","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"basement membrane/interstitial matrix interface","termid":"GO:0140086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen beaded filament","synonyms":[{"name":"beads on a string","type":"related"}],"termid":"GO:0098647"}


id: GO:1904192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cholangiocyte apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24498161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"cholangiocyte apoptotic process","termid":"GO:1902488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cholangiocyte apoptotic process","synonyms":[{"name":"regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"regulation of epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1904192"}


id: PBO:0068271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 8","termid":"PBO:0068271"}


id: GO:0008610
data:
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id: GO:0002296
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id: PBO:0079381
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id: MONDO:0001281
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id: GO:0002932
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id: MONDO:0019280
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id: PBO:0056647
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id: GO:0102655
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id: GO:0051743
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id: PBO:0043577
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id: GO:0017076
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id: MONDO:0022457
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id: GO:1901497
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id: SO:0001266
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id: MONDO:0030514
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id: GO:0050862
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id: GO:0005700
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id: GO:0009760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The combination of atmospheric CO2 with a 3-carbon molecule phosphoenol pyruvate (PEP) in the mesophyll cells to make a 4-carbon acid which is immediately converted to malic acid. The malic acid is then passed across to the bundle sheath cells where it is broken down again to pyruvic acid and CO2. The acid is passed back to the mesophyll cells to be used again, while the CO2 is fed into the reductive pentose-phosphate cycle (Calvin cycle) and converted into sugar and starch.","definition_xrefs":["ISBN:0816017360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon fixation","termid":"GO:0015977"},{"relation_name":"is_a","term_name":"photosynthesis, dark reaction","termid":"GO:0019685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"C4 photosynthesis","secondary_identifiers":["Wikipedia:C4_carbon_fixation"],"termid":"GO:0009760"}


id: FYPO:0000233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0002399","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"long cytoplasmic microtubules","synonyms":[{"name":"elongated cytoplasmic microtubules","type":"exact"},{"name":"long cytoplasmic microtubules during mitotic cell cycle","type":"related"},{"name":"long cytoplasmic microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defect, long cytoplasmic microtubules","type":"exact"},{"name":"microtubule organization defects, long cytoplasmic microtubules","type":"exact"}],"termid":"FYPO:0000233"}


id: PBO:0081288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 72A, pseudogene","termid":"PBO:0081288"}


id: PBO:0031691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_oxidative_phosphorylation","termid":"PBO:0031691"}


id: PBO:0069673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 950, pseudogene","termid":"PBO:0069673"}


id: PBO:0049242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granulin precursor","termid":"PBO:0049242"}


id: PBO:0026857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_glucose_starvation_gene_mRNA_during_vegetative_growth","termid":"PBO:0026857"}


id: PBO:0082378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic zinc-finger protein; similar to human and mouse Kin17 proteins which are chromatin-associated proteins involved in UV response and DNA replication","termid":"PBO:0082378"}


id: PR:Q9UUH4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg25 gene.","definition_xrefs":["UniProtKB:Q9UUH4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylsterol monooxygenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.08c","synonyms":[{"name":"C-4 methylsterol oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-erg25","type":"exact"}],"termid":"PR:Q9UUH4"}


id: MONDO:0007309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 1A (CMT1A) is a type ofinherited neurological disorder that affects the peripheral nerves. Affected individuals experience weakness and wasting (atrophy) of the muscles of the lower legs beginning in adolescence; later they experience hand weakness and sensory loss. CMT1A is caused byhaving an extra copy (a duplication) of the PMP22 gene. It is inherited in an autosomal dominant manner. Treatment for this condition may include physical therapy ; occupational therapy ; braces and other orthopedic devices; orthopedic surgery;and pain medications.","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 17","termid":"MONDO:0016950"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1A","secondary_identifiers":["OMIM:118220","MEDGEN:75727","GARD:1245","NCIT:C75468","DECIPHER:29","DOID:0110148","Orphanet:101081","UMLS:C0270911"],"synonyms":[{"name":"CMT 1A","type":"related"},{"name":"CMT1A","type":"exact"},{"name":"Charcot Marie Tooth disease type 1A","type":"related"},{"name":"Charcot-Marie-Tooth disease type 1A","type":"exact"},{"name":"Charcot-Marie-Tooth disease, autosomal dominant, with focally folded myelin sheaths, type 1A","type":"related"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1A","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1A","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1A","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 1A","type":"related"},{"name":"Charcot-Marie-Tooth syndrome type 1A","type":"exact"},{"name":"HMSN 1A","type":"related"},{"name":"HMSN1A","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease with focally folded myelin sheaths type 1A","type":"exact"},{"name":"hereditary motor and sensory neuropathy 1A","type":"exact"},{"name":"microduplication 17p12","type":"exact"}],"termid":"MONDO:0007309","xrefs":{"Monarch":{"xref_id":"0007309"}}}


id: MONDO:0012996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"L-Arginine:glycine amidinotransferase (AGAT) deficiency is a very rare type of creatine deficiency sydrome characterized by global developmental delay, intellectual disability, and myopathy.","definition_xrefs":["Orphanet:35704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral creatine deficiency syndrome","termid":"MONDO:0000456"},{"relation_name":"is_a","term_name":"creatine biosynthetic process disease","termid":"MONDO:0045018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"AGAT deficiency","secondary_identifiers":["SCTID:702440000","UMLS:C2675179","ICD9:270.8","OMIM:612718","DOID:0050712","MEDGEN:436367","NANDO:1201033","MESH:C567192","GARD:10323","NANDO:2201299"],"synonyms":[{"name":"AGAT deficiency","type":"exact"},{"name":"CCDS3","type":"exact"},{"name":"GATM deficiency","type":"exact"},{"name":"L-arginine:glycine amidinotransferase deficiency","type":"exact"},{"name":"arginine:glycine amidinotransferase deficiency","type":"exact"},{"name":"cerebral creatine deficiency syndrome 3","type":"exact"},{"name":"cerebral creatine deficiency syndrome type 3","type":"exact"},{"name":"creatine deficiency syndrome due to AGAT deficiency","type":"exact"},{"name":"disorder of glycine amidinotransferase activity","type":"exact"},{"name":"glycine amidinotransferase activity disease","type":"exact"}],"termid":"MONDO:0012996","xrefs":{"Monarch":{"xref_id":"0012996"}}}


id: SO:0000707
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 5' five prime splice site region of the donor RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans_splice_site","termid":"SO:0001420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_splice_donor_site","synonyms":[{"name":"5 prime trans splice site","type":"related"},{"name":"trans splice donor site","type":"exact"},{"name":"trans-splice donor site","type":"exact"}],"termid":"SO:0000707"}


id: GO:0030111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of the Wnt signal transduction pathway.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Wnt signaling pathway","secondary_identifiers":["Reactome:R-HSA-8939256","GO:0008590"],"synonyms":[{"name":"regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway","type":"exact"},{"name":"regulation of frizzled signaling pathway","type":"exact"},{"name":"regulation of frizzled signalling pathway","type":"exact"}],"termid":"GO:0030111"}


id: GO:0051722
data:
  {"annotated_genes":["SJAG_01628"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78316],"is_not":false,"summary":null,"term":"GO:0051722"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: C-terminal protein amino acid methyl ester + H2O = protein amino acid + methanol.","definition_xrefs":["PMID:8650216","PMID:10318862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylesterase activity","termid":"GO:0051723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0140096","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"protein C-terminal methylesterase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8856951"],"synonyms":[{"name":"protein phosphatase methylesterase activity","type":"narrow"}],"termid":"GO:0051722","terms_by_termid":{"GO:0051722":null}}


id: PBO:0050615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 7 pseudogene 1","termid":"PBO:0050615"}


id: PBO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex ubiquitin C-terminal hydrolase Ubp8","termid":"PBO:0000473"}


id: GO:0051628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of epinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of epinephrine uptake","termid":"GO:0051626"},{"relation_name":"positively_regulates","term_name":"epinephrine uptake","termid":"GO:0051625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of epinephrine uptake","synonyms":[{"name":"activation of epinephrine uptake","type":"narrow"},{"name":"positive regulation of adrenaline uptake","type":"exact"},{"name":"positive regulation of epinephrine import","type":"exact"},{"name":"stimulation of epinephrine uptake","type":"narrow"},{"name":"up regulation of epinephrine uptake","type":"exact"},{"name":"up-regulation of epinephrine uptake","type":"exact"},{"name":"upregulation of epinephrine uptake","type":"exact"}],"termid":"GO:0051628"}


id: GO:0035079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The decondensing (loosening) and swelling of the chromosomal sites of target genes on polytene chromosomes following response to a stimulus, to facilitate sudden bursts of transcriptional activity in response to transient environmental signals.","definition_xrefs":["PMID:12543962","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polytene chromosome puffing","termid":"GO:0035079"}


id: PBO:0005546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase/uracil phosphoribosyltransferase (predicted)","termid":"PBO:0005546"}


id: PR:000085718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-36. Example: UniProtKB:P09988, 2-136, Lys-37, MOD:00663.","definition_xrefs":["PMID:37459529","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"has_part","term_name":"methylated lysine","termid":"MOD:00663"},{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/Me(K36)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"PRO_0000221366, Lys-37, MOD:00663","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.2, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht2/InitMet-/K36Me","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-37, MOD:00663","type":"related"},{"name":"hht2/Me(K36)","type":"exact"}],"termid":"PR:000085718"}


id: GO:0047995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(4-hydroxyphenyl)lactate + NAD+ = 3-(4-hydroxyphenyl)pyruvate + NADH.","definition_xrefs":["RHEA:10780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxyphenylpyruvate reductase activity","secondary_identifiers":["EC:1.1.1.237","MetaCyc:HYDROXYPHENYLPYRUVATE-REDUCTASE-RXN"],"synonyms":[{"name":"4-hydroxyphenyllactate:NAD+ oxidoreductase activity","type":"related"},{"name":"HPRP","type":"related"}],"termid":"GO:0047995"}


id: GO:0070987
data:
  {"annotated_genes":["SJAG_04190","SJAG_04089","SJAG_00611","SJAG_04791","SJAG_03906","SJAG_00153"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60939,66598,70197,99109,102671,104017],"is_not":false,"summary":null,"term":"GO:0070987"}]},"cv_name":"biological_process","definition":"The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across the lesion. This process does not remove the replication-blocking lesions but does not causes an increase in the endogenous mutation level. For S. cerevisiae, RAD30 encodes DNA polymerase eta, which incorporates two adenines. When incorporated across a thymine-thymine dimer, it does not increase the endogenous mutation level.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translesion synthesis","termid":"GO:0019985"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"error-free translesion synthesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-110320"],"termid":"GO:0070987","terms_by_termid":{"GO:0070987":null}}


id: PBO:0044297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC5 antisense RNA 1","termid":"PBO:0044297"}


id: PBO:0029715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_absent_from_cell","termid":"PBO:0029715"}


id: PBO:0025506
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofructokinase deficiency","termid":"PBO:0025506"}


id: PBO:0078685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 1-1","termid":"PBO:0078685"}


id: PBO:0077177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 1","termid":"PBO:0077177"}


id: MOD:00762
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation - missing ref","definition_xrefs":["Unimod:309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"biantennary (-2 galactose) N4-glycosylated asparagine","synonyms":[{"name":"Biantennary (-2 galactose)","type":"related"},{"name":"Hex(3)HexNAc(4)","type":"related"}],"termid":"MOD:00762"}


id: PBO:0042948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 2","termid":"PBO:0042948"}


id: PBO:0055910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 34 pseudogene 1","termid":"PBO:0055910"}


id: PBO:0044886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"density regulated re-initiation and release factor","termid":"PBO:0044886"}


id: GO:0071758
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgW isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgW immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgW immunoglobulin complex","termid":"GO:0071758"}


id: GO:1905943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of formation of growth cone in injured axon.","definition_xrefs":["PMID:19737525","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sprouting of injured axon","termid":"GO:0048688"},{"relation_name":"is_a","term_name":"regulation of formation of growth cone in injured axon","termid":"GO:1905942"},{"relation_name":"negatively_regulates","term_name":"formation of growth cone in injured axon","termid":"GO:0048689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of formation of growth cone in injured axon","synonyms":[{"name":"down regulation of formation of growth cone in injured axon","type":"exact"},{"name":"down-regulation of formation of growth cone in injured axon","type":"exact"},{"name":"downregulation of formation of growth cone in injured axon","type":"exact"},{"name":"inhibition of formation of growth cone in injured axon","type":"narrow"}],"termid":"GO:1905943"}


id: MONDO:0007538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the FAM83H gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypocalcified amelogenesis imperfecta","termid":"MONDO:0968955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, type 3A","secondary_identifiers":["SCTID:109471001","DOID:0110055","OMIM:130900","MESH:C562880","UMLS:C5886770","MEDGEN:1854533"],"synonyms":[{"name":"ADHCAI","type":"exact"},{"name":"AI3","type":"exact"},{"name":"AI3A","type":"related"},{"name":"FAM83H amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in FAM83H","type":"exact"},{"name":"amelogenesis imperfecta hypomineralization type","type":"broad"},{"name":"amelogenesis imperfecta type 3","type":"broad"},{"name":"amelogenesis imperfecta type 3A","type":"related"},{"name":"amelogenesis imperfecta type III","type":"broad"},{"name":"amelogenesis imperfecta, hypocalcification type, autosomal dominant","type":"related"},{"name":"amelogenesis imperfecta, hypomineralization type","type":"related"},{"name":"amelogenesis imperfecta, type 3","type":"related"},{"name":"amelogenesis imperfecta, type 3A","type":"exact"},{"name":"amelogenesis imperfecta, type III","type":"related"},{"name":"amelogenesis imperfecta, type IIIA","type":"related"},{"name":"autosomal dominant amelogenesis imperfecta hypocalcification type","type":"exact"}],"termid":"MONDO:0007538","xrefs":{"Monarch":{"xref_id":"0007538"}}}


id: PBO:0064602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox 3","termid":"PBO:0064602"}


id: PBO:0062606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily R member 1 pseudogene","termid":"PBO:0062606"}


id: MOD:00616
data:
  {"annotated_genes":["SJAG_03012","SJAG_02902","SJAG_02980","SJAG_03632","SJAG_02592","SJAG_03524","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80555,80556,119046,119355,119044,119047,119356,119045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[80432,80263,80309,80489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:01154"}]},"cv_name":"PSI-MOD","definition":"Natural or modified residues that are isobaric at a resolution below 0.1 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by isobaric sets","termid":"MOD:00538"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_02902":null,"SJAG_02980":null,"SJAG_03012":null,"SJAG_03524":null,"SJAG_03632":null},"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at a resolution below 0.1 Da","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"termid":"MOD:00616","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null,"MOD:01154":null}}


id: PBO:0090666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GIDA family tRNA uridine 5-carboxymethylaminomethyl modification enzyme Ips1","termid":"PBO:0090666"}


id: MONDO:1012159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, goat","secondary_identifiers":["OMIA:000631-9925"],"termid":"MONDO:1012159","xrefs":{"Monarch":{"xref_id":"1012159"}}}


id: MONDO:1012411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"compulsive disorder, non-human animal","termid":"MONDO:1011636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compulsive disorder, dog","secondary_identifiers":["OMIA:001530-9615"],"termid":"MONDO:1012411","xrefs":{"Monarch":{"xref_id":"1012411"}}}


id: PBO:0036460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase, human carnosine N-methyltransferase ortholog","termid":"PBO:0036460"}


id: GO:1903691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of wound healing, spreading of epidermal cells.","definition_xrefs":["GOC:als","GOC:TermGenie","PMID:18394891","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of wound healing","termid":"GO:0090303"},{"relation_name":"is_a","term_name":"regulation of wound healing, spreading of epidermal cells","termid":"GO:1903689"},{"relation_name":"positively_regulates","term_name":"wound healing, spreading of epidermal cells","termid":"GO:0035313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of wound healing, spreading of epidermal cells","synonyms":[{"name":"activation of wound healing, spreading of epidermal cells","type":"narrow"},{"name":"up regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"up-regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"upregulation of wound healing, spreading of epidermal cells","type":"exact"}],"termid":"GO:1903691"}


id: GO:0099522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any (proper) part of the cytosol of a single cell of sufficient size to still be considered cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytosolic region","synonyms":[{"name":"region of cytosol","type":"exact"}],"termid":"GO:0099522"}


id: PR:000050546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein gtr2 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PMID:27227887","PPRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein gtr2 (Schizosaccharomyces pombe)","termid":"PR:000050544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gtr2/GTP+","pombase_gene_id":"SPCC777.05","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein gtr2, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-gtr2/GTP+","type":"exact"},{"name":"gtr2/GTP+","type":"exact"},{"name":"Gtr2/GTP+","type":"exact"}],"termid":"PR:000050546"}


id: PBO:0077201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TM4SF18 antisense RNA 1","termid":"PBO:0077201"}


id: PBO:0059037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 25","termid":"PBO:0059037"}


id: GO:2000102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mammary stem cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of mammary stem cell proliferation","termid":"GO:2000101"},{"relation_name":"negatively_regulates","term_name":"mammary stem cell proliferation","termid":"GO:0002174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mammary stem cell proliferation","termid":"GO:2000102"}


id: FYPO:0005319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is spherical, and undergoes two or more rounds of cell division before all cells die, and some cells lyse.","definition_xrefs":["PomBase:mah","PMID:9636183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, abnormal morphology","termid":"FYPO:0002148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, spherical cell with cell lysis","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, spherical cell with cell lysis","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, spherical cell with cell lysis","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, spherical cell with cell lysis","type":"exact"}],"termid":"FYPO:0005319"}


id: PBO:0050348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 51","termid":"PBO:0050348"}


id: PBO:0073819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 20","termid":"PBO:0073819"}


id: PBO:0081244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 14","termid":"PBO:0081244"}


id: PBO:0079395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 2","termid":"PBO:0079395"}


id: PR:Q9USS7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein transport protein Sec24D that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02758","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.03c","secondary_identifiers":["UniProtKB:Q9USS7"],"synonyms":[{"name":"Spom972h-SEC24D","type":"exact"}],"termid":"PR:Q9USS7"}


id: PBO:0091660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate lyase Icl1","termid":"PBO:0091660"}


id: MONDO:0016133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary metabolic disease with peripheral neuropathy (obsolete MONDO:0016133)","secondary_identifiers":["Orphanet:207018"],"termid":"MONDO:0016133","xrefs":{"Monarch":{"xref_id":"0016133"}}}


id: MONDO:0014275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fanconi syndrome in which the cause of the disease is a mutation in the EHHADH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary Fanconi syndrome","termid":"MONDO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Fanconi renotubular syndrome 3","secondary_identifiers":["MEDGEN:816430","OMIM:615605","UMLS:C3810100","DOID:0080759","GARD:15991"],"synonyms":[{"name":"EHHADH Fanconi syndrome","type":"exact"},{"name":"FRTS3","type":"related"},{"name":"Fanconi renotubular syndrome 3","type":"exact"},{"name":"Fanconi renotubular syndrome type 3","type":"exact"},{"name":"Fanconi syndrome caused by mutation in EHHADH","type":"exact"}],"termid":"MONDO:0014275","xrefs":{"Monarch":{"xref_id":"0014275"}}}


id: PBO:0117116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC7A5 antisense RNA 1","termid":"PBO:0117116"}


id: PR:G2TRK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.22 gene.","definition_xrefs":["UniProtKB:G2TRK2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A4.22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.22","synonyms":[{"name":"Spom972h-SPAC29A4.22","type":"exact"}],"termid":"PR:G2TRK2"}


id: FYPO:0003913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at a lower frequency than normal during the vegetative growth phase of the life cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased minichromosome loss during vegetative growth","synonyms":[{"name":"decreased minichromosome loss during mitotic cell cycle","type":"related"},{"name":"reduced minichromosome loss during vegetative growth","type":"exact"}],"termid":"FYPO:0003913"}


id: PBO:0075594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spire type actin nucleation factor 1","termid":"PBO:0075594"}


id: MONDO:0015310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic optic nerve hypoplasia (obsolete MONDO:0015310)","secondary_identifiers":["Orphanet:137905"],"termid":"MONDO:0015310","xrefs":{"Monarch":{"xref_id":"0015310"}}}


id: GO:0048795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the swim bladder is generated and organized. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"swim bladder development","termid":"GO:0048794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder morphogenesis","synonyms":[{"name":"gas bladder morphogenesis","type":"exact"}],"termid":"GO:0048795"}


id: PBO:0041218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1","termid":"PBO:0041218"}


id: PBO:0002654
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhizomelic chondrodysplasia punctata (RCDP)","termid":"PBO:0002654"}


id: SO:0000753
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of sequence that has been inserted and is being propagated by the clone.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"},{"relation_name":"part_of","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clone_insert","synonyms":[{"name":"clone insert","type":"exact"}],"termid":"SO:0000753"}


id: GO:0120305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the deposition or modulates the distribution of coloring matter in an organism.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pigmentation","termid":"GO:0120305"}


id: MONDO:1010526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, dog","secondary_identifiers":["OMIA:000197-9615"],"termid":"MONDO:1010526","xrefs":{"Monarch":{"xref_id":"1010526"}}}


id: MONDO:0013254
data:
  {"annotated_genes":["SJAG_02680"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85954],"is_not":false,"summary":null,"term":"MONDO:0013254"}]},"cv_name":"mondo","definition":"A developmental and epileptic encephalopathy characterized by microcephaly, infantile onset of seizures and developmental delay that has material basis in homozygous or compound heterozygous mutation in the PNKP gene on chromosome 19q13.","definition_xrefs":["DOID:0080457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly","termid":"MONDO:0001149"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly, seizures, and developmental delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:228418","GARD:10933","UMLS:C3150667","MEDGEN:462017","OMIM:613402"],"synonyms":[{"name":"EIEE10","type":"related"},{"name":"MCSZ","type":"related"},{"name":"early infantile epileptic encephalopathy-10","type":"related"},{"name":"epileptic encephalopathy, early infantile, 10","type":"related"},{"name":"microcephaly - seizures - developmental delay","type":"related"},{"name":"microcephaly, seizures, and developmental delay","type":"exact"}],"termid":"MONDO:0013254","terms_by_termid":{"MONDO:0013254":null},"xrefs":{"Monarch":{"xref_id":"0013254"}}}


id: MONDO:0003392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare germ cell tumor that affects the fallopian tube. The vast majority of cases are teratomas.","definition_xrefs":["NCIT:C40130"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"fallopian tube cancer","termid":"MONDO:0002158"},{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"},{"relation_name":"is_a","term_name":"fallopian tube neoplasm","termid":"MONDO:0021092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube germ cell tumor","secondary_identifiers":["DOID:5324","MEDGEN:274487","UMLS:C1517114"],"synonyms":[{"name":"fallopian tube germ cell cancer","type":"related"},{"name":"fallopian tube germ cell neoplasm","type":"exact"},{"name":"fallopian tube germ cell tumor","type":"exact"}],"termid":"MONDO:0003392","xrefs":{"Monarch":{"xref_id":"0003392"}}}


id: GO:0005528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 23-membered macrolide lactone FK506.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide binding","termid":"GO:0005527"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"FK506 binding","synonyms":[{"name":"FK506-sensitive peptidyl-prolyl cis-trans isomerase","type":"related"}],"termid":"GO:0005528"}


id: PBO:0063322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase","termid":"PBO:0063322"}


id: PBO:0029260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_leucine_import","termid":"PBO:0029260"}


id: PBO:0067691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal N3","termid":"PBO:0067691"}


id: PBO:0085724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the HOG (high osmolarity glycerol) pathway; negatively regulates Hog1p by recruitment of phosphatase Ptc1p to the Pbs2p-Hog1p complex; interacts with Bck1p and down regulates the cell wall integrity pathway; found in the nucleus and cytoplasm; contains an SH3 domain and a Ptc1p binding domain (PBM)","termid":"PBO:0085724"}


id: GO:1903040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an exon-exon junction complex.","definition_xrefs":["GOC:TermGenie","PMID:17606899","GO_REF:0000079","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"exon-exon junction complex assembly","synonyms":[{"name":"EJC assembly","type":"exact"},{"name":"EJC formation","type":"exact"},{"name":"exon-exon junction complex formation","type":"exact"}],"termid":"GO:1903040"}


id: MONDO:0002086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acanthoma characterized by the presence of psoriasiform epidermal acanthosis and basal cells with pale cytoplasm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acanthoma","termid":"MONDO:0002093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"clear cell acanthoma","secondary_identifiers":["NCIT:C97041","MEDGEN:83098","DOID:172","UMLS:C0333992","SCTID:254670002","icd11.foundation:1582724858"],"synonyms":[{"name":"Degos acanthoma","type":"exact"},{"name":"clear cell acanthoma (morphologic abnormality)","type":"exact"},{"name":"pale (clear cell) acanthoma","type":"exact"}],"termid":"MONDO:0002086","xrefs":{"Monarch":{"xref_id":"0002086"}}}


