# terms

id: GO:2001139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipid transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"regulation of phospholipid transport","termid":"GO:2001138"},{"relation_name":"negatively_regulates","term_name":"phospholipid transport","termid":"GO:0015914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipid transport","termid":"GO:2001139"}


id: GO:0035008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of the melanization defense response during injury or invasion.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of melanization defense response","termid":"GO:0035007"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"positively_regulates","term_name":"melanization defense response","termid":"GO:0035006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of melanization defense response","synonyms":[{"name":"activation of melanization defense response","type":"narrow"},{"name":"positive regulation of melanization defence response","type":"exact"},{"name":"stimulation of melanization defense response","type":"narrow"},{"name":"up regulation of melanization defense response","type":"exact"},{"name":"up-regulation of melanization defense response","type":"exact"},{"name":"upregulation of melanization defense response","type":"exact"}],"termid":"GO:0035008"}


id: PBO:0071160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23","termid":"PBO:0071160"}


id: PBO:0056785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 2","termid":"PBO:0056785"}


id: PBO:0004070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine synthase (predicted)","termid":"PBO:0004070"}


id: GO:0021637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the oculomotor nerve. This process pertains to the physical shaping of a rudimentary structure. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:cls","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"trigeminal nerve morphogenesis","termid":"GO:0021636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal nerve structural organization","synonyms":[{"name":"CN V structural organization","type":"related"},{"name":"trigeminal nerve structural organisation","type":"exact"}],"termid":"GO:0021637"}


id: PBO:0039274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2","termid":"PBO:0039274"}


id: PBO:0049783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 18","termid":"PBO:0049783"}


id: GO:0044865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of cell division in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24218612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cell division","synonyms":[{"name":"inhibition by virus of host cell division","type":"narrow"},{"name":"negative regulation by virus of host cell division","type":"narrow"}],"termid":"GO:0044865"}


id: PBO:0040348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 5","termid":"PBO:0040348"}


id: PBO:0048285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase like 5","termid":"PBO:0048285"}


id: PBO:0069104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 352, pseudogene","termid":"PBO:0069104"}


id: MONDO:0003804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood protein disease (obsolete MONDO:0003804)","secondary_identifiers":["DOID:620","MESH:D001796"],"synonyms":[{"name":"Protein disorder, blood","type":"related"},{"name":"Protein disorders, blood","type":"related"},{"name":"blood Protein disorder","type":"related"},{"name":"blood protein disorder","type":"exact"},{"name":"disorder, blood Protein","type":"related"},{"name":"disorders, blood Protein","type":"related"}],"termid":"MONDO:0003804","xrefs":{"Monarch":{"xref_id":"0003804"}}}


id: GO:0019105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a palmitoyl group to a nitrogen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-palmitoyltransferase activity (obsolete GO:0019105)","termid":"GO:0019105"}


id: MONDO:0019422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked syndromic intellectual disability characterized by intellectual deficit, hypotonia, absent deep tendon reflexes, tapered fingers and excessive fingerprint arches, genu valgum, a characteristic face and small teeth. It has been described in four males from two generations of one family. The causative gene appears to be located in the q13 region of the X chromosome.","definition_xrefs":["Orphanet:85325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability, Stevenson type","secondary_identifiers":["SCTID:718909001","MEDGEN:930746","UMLS:C4305077","GARD:19058"],"termid":"MONDO:0019422","xrefs":{"Monarch":{"xref_id":"0019422"}}}


id: PR:G2TRM8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coa2 gene.","definition_xrefs":["UniProtKB:G2TRM8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.17","synonyms":[{"name":"Spom972h-coa2","type":"exact"}],"termid":"PR:G2TRM8"}


id: GO:0060361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of an organism from one location to another through the air, usually by means of active wing movement.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flight","termid":"GO:0060361"}


id: PBO:0001898
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible frameshift","termid":"PBO:0001898"}


id: PBO:0072584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 7 homolog A","termid":"PBO:0072584"}


id: RO:0002357
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in developmental induction of c if and only if p is a collection of cell-cell signaling processes that signal to a neighbouring tissue that is the precursor of the mature c, where the signaling results in the commitment to cell types necessary for the formation of c.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_developmental_induction_of","termid":"RO:0002357"}


id: MONDO:1012118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypoplasia of mammary gland, non-human animal","termid":"MONDO:1011677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypoplasia of mammary gland, sheep","secondary_identifiers":["OMIA:000529-9940"],"termid":"MONDO:1012118","xrefs":{"Monarch":{"xref_id":"1012118"}}}


id: PBO:0117269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_characteristic","termid":"PBO:0117269"}


id: PBO:0073049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 7","termid":"PBO:0073049"}


id: PBO:0047201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 217 member A pseudogene 1","termid":"PBO:0047201"}


id: PATO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is less than extreme in type or degree or effect or force.","definition_xrefs":["Merriam-Webster:Merriam-Webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moderate intensity","termid":"PATO:0000395"}


id: PBO:0080510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WARS2 intronic transcript 1","termid":"PBO:0080510"}


id: MONDO:0005656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with nematodes of the order ascaridida.","definition_xrefs":["MESH:D017191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ascaridida infectious disease","synonyms":[{"name":"Ascaridida caused disease or disorder","type":"exact"},{"name":"Ascaridida disease or disorder","type":"exact"},{"name":"Ascaridida infection","type":"related"},{"name":"infection, Ascaridida","type":"related"},{"name":"infections, Ascaridida","type":"related"}],"termid":"MONDO:0005656","xrefs":{"Monarch":{"xref_id":"0005656"}}}


id: PBO:0053841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1107","termid":"PBO:0053841"}


id: PBO:0063907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase adaptor protein 1","termid":"PBO:0063907"}


id: PBO:0091334
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase Z Homolog","termid":"PBO:0091334"}


id: PBO:0073077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal cell derived factor 2","termid":"PBO:0073077"}


id: GO:0003278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in heart morphogenesis","synonyms":[{"name":"apoptosis involved in heart morphogenesis","type":"narrow"}],"termid":"GO:0003278"}


id: internal:interim
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interim","termid":"internal:interim"}


id: GO:0009022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate.","definition_xrefs":["PMID:2455297","RHEA:10628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0016740","GO:0140098","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"tRNA nucleotidyltransferase activity","secondary_identifiers":["MetaCyc:TRNA-NUCLEOTIDYLTRANSFERASE-RXN","EC:2.7.7.56"],"synonyms":[{"name":"RNase PH activity","type":"related"},{"name":"phosphate-dependent exonuclease activity","type":"related"},{"name":"ribonuclease PH activity","type":"related"}],"termid":"GO:0009022"}


id: GO:0044265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a macromolecule, any large molecule including proteins, nucleic acids and carbohydrates, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular macromolecule catabolic process (obsolete GO:0044265)","synonyms":[{"name":"cellular biopolymer catabolic process","type":"exact"},{"name":"cellular macromolecule breakdown","type":"exact"},{"name":"cellular macromolecule catabolism","type":"exact"},{"name":"cellular macromolecule degradation","type":"exact"}],"termid":"GO:0044265"}


id: MONDO:0009058
data:
  {"annotated_genes":["SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84839],"is_not":false,"summary":null,"term":"MONDO:0009058"}]},"cv_name":"mondo","definition":"Cystathioninuria is an autosomal recessive disorder caused by cystathionine gamma-lyase deficiency. It is usually pyridoxine-dependent, but in very rare cases it may be non-dependent. It is generally considered to be a benign condition without pathogenic relevance. However, association of cystathioninuria with intellectual impairment has been reported in several cases.","definition_xrefs":["Orphanet:212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of methionine cycle and sulfur amino acid metabolism","termid":"MONDO:0019222"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"cystathioninuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C129070","DOID:0090142","UMLS:C0220993","GARD:2428","OMIM:219500","HP:0003153","MEDGEN:66353","icd11.foundation:1415819835","SCTID:13003007"],"synonyms":[{"name":"Cystathione gamma-lyase deficiency syndrome","type":"exact"},{"name":"cystathionase deficiency","type":"exact"},{"name":"cystathione gamma-lyase deficiency syndrome","type":"exact"},{"name":"cystathioninuria","type":"exact"},{"name":"cystathioninuria (disease)","type":"exact"},{"name":"gamma-cystathionase deficiency","type":"exact"}],"termid":"MONDO:0009058","terms_by_termid":{"MONDO:0009058":null},"xrefs":{"Monarch":{"xref_id":"0009058"}}}


id: MONDO:0017770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Robinow-like syndrome is characterized by the association of the clinical features present in Robinow syndrome (short stature, mesomelic brachymelia, macrocephaly, and hypoplastic genitalia), with anterior chamber cleavage anomalies. It has been described in two sisters and is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:3105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Robinow-like syndrome","secondary_identifiers":["SCTID:721905000"],"synonyms":[{"name":"Saal-Greenstein syndrome","type":"exact"}],"termid":"MONDO:0017770","xrefs":{"Monarch":{"xref_id":"0017770"}}}


id: GO:0036403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8S,9E,11Z,14Z)-8-hydroperoxyicosa-5,9,11,14-tetraenoate.","definition_xrefs":["GOC:lb","RHEA:38675","PMID:10625675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"arachidonate 8(S)-lipoxygenase activity","secondary_identifiers":["KEGG_REACTION:R07053"],"synonyms":[{"name":"8(S)-lipoxygenase activity","type":"broad"},{"name":"8-lipoxygenase (S-type)","type":"broad"}],"termid":"GO:0036403"}


id: MONDO:0020848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant osteopetrosis","termid":"MONDO:0020645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"osteopetrosis, autosomal dominant 3","secondary_identifiers":["OMIM:618107","MEDGEN:1648454","UMLS:C4748197"],"synonyms":[{"name":"OPTA3","type":"exact"},{"name":"OSTEOPETROSIS, autosomal dominant 3","type":"exact"}],"termid":"MONDO:0020848","xrefs":{"Monarch":{"xref_id":"0020848"}}}


id: MONDO:0009523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lichstenstein syndrome is characterized by frequent infections associated with osteoporosis, a tendency for fractures and osseous anomalies. It has been described in two monozygotic twin brothers. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Lichtenstein syndrome","secondary_identifiers":["GARD:3248","OMIM:246550","UMLS:C1855502","SCTID:763668009","MESH:C535894","MEDGEN:340889"],"synonyms":[{"name":"Lichtenstein syndrome","type":"exact"},{"name":"neutropenia immunoglobulin deficiency peculiar facies and bony anomalies","type":"related"}],"termid":"MONDO:0009523","xrefs":{"Monarch":{"xref_id":"0009523"}}}


id: GO:1900438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to chemical stimulus.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:1900437"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"narrow"}],"termid":"GO:1900438"}


id: GO:0050974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a mechanical stimulus is received and converted into a molecular signal as part of sensory perception.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus","termid":"GO:0050982"},{"relation_name":"part_of","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of mechanical stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory transduction of mechanical stimulus during sensory perception","type":"exact"}],"termid":"GO:0050974"}


id: GO:0031933
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Heterochromatic regions of the chromosome found at the telomeres.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete telomeric heterochromatin (obsolete GO:0031933)","synonyms":[{"name":"telomeric chromatin","type":"broad"}],"termid":"GO:0031933"}


id: PATO:0000224
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000224 motor function (obsolete PATO:0000224)","termid":"PATO:0000224"}


id: PBO:0043252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLDN10 antisense RNA 1","termid":"PBO:0043252"}


id: FYPO:0004968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is decreased relative to normal under conditions of phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002058","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"decreased vegetative cell population growth during phosphate starvation","synonyms":[{"name":"decreased vegetative cell population growth during phosphate depletion","type":"exact"},{"name":"decreased vegetative cell population growth during phosphate deprivation","type":"exact"},{"name":"decreased vegetative cell population growth during phosphate limitation","type":"exact"},{"name":"decreased vegetative cell population growth in response to phosphate starvation","type":"exact"},{"name":"reduced vegetative cell population growth during phosphate starvation","type":"exact"},{"name":"sensitive to phosphate starvation","type":"related"},{"name":"slow vegetative cell population growth during phosphate starvation","type":"narrow"}],"termid":"FYPO:0004968"}


id: GO:0072438
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of DNA replication checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA integrity checkpoint signaling","termid":"GO:0072402"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication checkpoint effector process","type":"exact"},{"name":"response to signal involved in DNA replication checkpoint","type":"exact"}],"termid":"GO:0072438","terms_by_termid":{"GO:0072441":null}}


id: MONDO:0011361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"prostate cancer","termid":"MONDO:0008315"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer/brain cancer susceptibility","secondary_identifiers":["MEDGEN:400334","UMLS:C1863600","OMIM:603688"],"synonyms":[{"name":"Capb","type":"related"},{"name":"Pcbc","type":"related"},{"name":"prostate cancer/brain cancer susceptibility","type":"exact"},{"name":"prostate cancer/brain cancer susceptibility, somatic","type":"exact"}],"termid":"MONDO:0011361","xrefs":{"Monarch":{"xref_id":"0011361"}}}


id: PBO:0071247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 88","termid":"PBO:0071247"}


id: PBO:0071331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 8","termid":"PBO:0071331"}


id: GO:0000031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + n {[alpha-D-Man-(1->2)-alpha-D-Man-(1->2)]-alpha-D-Man-(1->6)}60-(Man9GlcNAc2-[protein] = phosphorylated {[alpha-D-Man-(1->2)-alpha-D-Man-(1->2)]-alpha-D-Man-(1->6)}60-(Man9GlcNAc2-[protein] + n GMP + n H+ or GDP-alpha-D-mannose + alpha-D-Man-(1->3)-alpha-D-Man-(1->3)-alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-3-O-(Ser/Thr)-[protein] = alpha-D-Man-(1->3)-alpha-D-Man-(1->3)-[alpha-D-Man-6P-]-alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-3-O-(Ser/Thr)-[protein] + GMP + H+.","definition_xrefs":["MetaCyc:RXN-22694","MetaCyc:RXN-22693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"mannosylphosphate transferase activity","termid":"GO:0000031"}


id: PBO:0050130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 40","termid":"PBO:0050130"}


id: PATO:0000639
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer whose structure deteriorates or is lost over time due to an active pathological process.","definition_xrefs":["PATOC:mb","PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"has_part","term_name":"hypotrophic","termid":"PATO:0000585"},{"relation_name":"is_a","term_name":"degeneration","termid":"PATO:0002037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerate","synonyms":[{"name":"degeneration","type":"narrow"}],"termid":"PATO:0000639"}


id: PBO:0001890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylceramide biosynthesis protein (predicted)","termid":"PBO:0001890"}


id: PBO:0088704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF","termid":"PBO:0088704"}


id: PBO:0054663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2069","termid":"PBO:0054663"}


id: PBO:0049658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 12","termid":"PBO:0049658"}


id: GO:0097232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a lamellar body. A lamellar body is a membrane-bounded organelle, specialized for the storage and secretion of various substances (surfactant phospholipids, glycoproteins and acid phosphates) which are arranged in the form of tightly packed, concentric, membrane sheets or lamellae. Has some similar properties to, but is distinct from, a lysosome.","definition_xrefs":["PMID:11940594","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"lamellar body","termid":"GO:0042599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"lamellar body membrane","termid":"GO:0097232"}


id: PBO:0045485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DS cell adhesion molecule like 1","termid":"PBO:0045485"}


id: PBO:0047738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 3A","termid":"PBO:0047738"}


id: MONDO:0032753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic ataxia","termid":"MONDO:0017845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic ataxia 9, autosomal recessive","secondary_identifiers":["MEDGEN:1680026","OMIM:618438","UMLS:C5193100"],"synonyms":[{"name":"SPASTIC ATAXIA 9, AUTOSOMAL RECESSIVE","type":"related"},{"name":"SPAX9","type":"related"}],"termid":"MONDO:0032753","xrefs":{"Monarch":{"xref_id":"0032753"}}}


id: PBO:0046165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E74 like ETS transcription factor 3","termid":"PBO:0046165"}


id: PBO:0045348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase","termid":"PBO:0045348"}


id: PBO:0091543
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-Amylase Homolog","termid":"PBO:0091543"}


id: MONDO:0859305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with eye movement abnormalities and ataxia","secondary_identifiers":["MEDGEN:1824014","OMIM:620094","UMLS:C5774241","DOID:0081275"],"termid":"MONDO:0859305","xrefs":{"Monarch":{"xref_id":"0859305"}}}


id: GO:1904535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomeric loop disassembly.","definition_xrefs":["GOC:BHF_telomere","GOC:BHF","GOC:TermGenie","GOC:nc","GO_REF:0000058","PMID:22579284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomeric loop disassembly","termid":"GO:1904533"},{"relation_name":"positively_regulates","term_name":"telomeric loop disassembly","termid":"GO:0090657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomeric loop disassembly","synonyms":[{"name":"activation of T loop disassembly","type":"narrow"},{"name":"activation of telomeric loop disassembly","type":"narrow"},{"name":"positive regulation of T loop disassembly","type":"exact"},{"name":"up regulation of T loop disassembly","type":"exact"},{"name":"up regulation of telomeric loop disassembly","type":"exact"},{"name":"up-regulation of T loop disassembly","type":"exact"},{"name":"up-regulation of telomeric loop disassembly","type":"exact"},{"name":"upregulation of T loop disassembly","type":"exact"},{"name":"upregulation of telomeric loop disassembly","type":"exact"}],"termid":"GO:1904535"}


id: MONDO:0003008
data:
  {"annotated_genes":["SJAG_01144","SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[85958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"}]},"cv_name":"mondo","definition":"An instance of renal cell carcinoma (disease) that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell adenocarcinoma","termid":"MONDO:0005549"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01144":null,"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"hereditary renal cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536851","NCIT:C39789","DOID:4455","MEDGEN:392857","UMLS:C2608055","SCTID:717736007"],"synonyms":[{"name":"familial renal carcinoma","type":"related"},{"name":"hereditary renal carcinoma","type":"related"},{"name":"hereditary renal cell cancer","type":"exact"},{"name":"hereditary renal cell carcinoma","type":"exact"},{"name":"hereditary renal cell carcinoma (disease)","type":"exact"}],"termid":"MONDO:0003008","terms_by_termid":{"MONDO:0003789":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0003008"}}}


id: GO:0047594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-6-hydroxyhyoscyamine + 2-oxoglutarate + O2 = CO2 + H2O + H+ + scopolamine + succinate.","definition_xrefs":["RHEA:12797","EC:1.14.20.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"6-beta-hydroxyhyoscyamine epoxidase activity","secondary_identifiers":["MetaCyc:6-BETA-HYDROXYHYOSCYAMINE-EPOXIDASE-RXN","KEGG_REACTION:R03737"],"synonyms":[{"name":"(6S)-6-hydroxyhyoscyamine,2-oxoglutarate oxidoreductase (epoxide-forming)","type":"related"},{"name":"6beta-hydroxyhyoscyamine epoxidase activity","type":"related"},{"name":"hydroxyhyoscyamine dioxygenase activity","type":"related"}],"termid":"GO:0047594"}


id: PBO:0065023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 3 pseudogene 2","termid":"PBO:0065023"}


id: GO:0030806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of chemical reactions and pathways resulting in the breakdown of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclic nucleotide catabolic process (obsolete GO:0030806)","synonyms":[{"name":"down regulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"down-regulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"downregulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"inhibition of cyclic nucleotide catabolic process","type":"narrow"},{"name":"negative regulation of cyclic nucleotide breakdown","type":"exact"},{"name":"negative regulation of cyclic nucleotide catabolism","type":"exact"},{"name":"negative regulation of cyclic nucleotide degradation","type":"exact"}],"termid":"GO:0030806"}


id: GO:0033029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of neutrophil apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"regulates","term_name":"neutrophil apoptotic process","termid":"GO:0001781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil apoptotic process","synonyms":[{"name":"regulation of neutrophil apoptosis","type":"narrow"}],"termid":"GO:0033029"}


id: MOD:01732
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01732"}


id: PBO:0041101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSD domain containing 1","termid":"PBO:0041101"}


id: FYPO:0001657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of serine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal serine import","synonyms":[{"name":"abnormal L-serine import","type":"exact"},{"name":"abnormal L-serine import across plasma membrane","type":"exact"},{"name":"abnormal serine import during mitotic cell cycle","type":"related"},{"name":"abnormal serine import during vegetative growth","type":"exact"},{"name":"abnormal serine import into cell","type":"exact"},{"name":"abnormal serine uptake","type":"exact"}],"termid":"FYPO:0001657"}


id: MONDO:0100575
data:
  {"annotated_genes":["SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014517"}]},"cv_name":"mondo","definition":"A generalized epilepsy that is understood to have a genetic etiology. This does not always mean that the epilepsy is inherited or can be transmitted to offspring, as the genetic etiology may be a de novo pathogenic variant, or the genetic etiology may have complex/polygenic inheritance.","direct_ancestors":[{"relation_name":"is_a","term_name":"generalized epilepsy","termid":"MONDO:0100574"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"genetic generalized epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1836944","UMLS:C5816885"],"termid":"MONDO:0100575","terms_by_termid":{"MONDO:0014517":null},"xrefs":{"Monarch":{"xref_id":"0100575"}}}


id: MONDO:1012507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barr-like polyradiculoneuropathy, non-human animal","termid":"MONDO:1011895"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guillain-Barr-like polyradiculoneuropathy, dog","secondary_identifiers":["OMIA:002062-9615"],"termid":"MONDO:1012507","xrefs":{"Monarch":{"xref_id":"1012507"}}}


id: MONDO:0010472
data:
  {"annotated_genes":["SJAG_03311"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86680],"is_not":false,"summary":null,"term":"MONDO:0010472"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005027","MONDO:0700092","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 36","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:324422","SCTID:733451007","UMLS:C4317295","OMIM:300884","DOID:0080470","GARD:12401","MEDGEN:1382656"],"synonyms":[{"name":"ALG13-CDG","type":"exact"},{"name":"CDG Is","type":"related"},{"name":"CDG syndrome type Is","type":"exact"},{"name":"CDG-Is","type":"exact"},{"name":"CDG1S","type":"exact"},{"name":"DEE36","type":"exact"},{"name":"EIEE36","type":"exact"},{"name":"congenital disorder of glycosylation type 1s","type":"exact"},{"name":"congenital disorder of glycosylation type Is","type":"exact"},{"name":"congenital disorder of glycosylation, type Is","type":"related"},{"name":"developmental and epileptic encephalopathy 36","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 36","type":"exact"}],"termid":"MONDO:0010472","terms_by_termid":{"MONDO:0010472":null},"xrefs":{"Monarch":{"xref_id":"0010472"}}}


id: PBO:0005671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase Dfr1","termid":"PBO:0005671"}


id: PBO:0036453
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microvillus inclusion disease","termid":"PBO:0036453"}


id: PBO:0071381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 4","termid":"PBO:0071381"}


id: GO:0031527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a filopodium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"filopodium","termid":"GO:0030175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"filopodium membrane","termid":"GO:0031527"}


id: FYPO:0007493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of alpha-D-glucan measured in the spore wall is lower than normal.","definition_xrefs":["PomBase:mah","PMID:16420355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall alpha-glucan level","termid":"FYPO:0001081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002946","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased ascospore wall alpha-glucan level","synonyms":[{"name":"decreased ascospore wall alpha-D-glucan level","type":"exact"},{"name":"decreased ascospore wall alpha-glucan accumulation","type":"related"},{"name":"decreased ascospore wall alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"decreased ascospore wall alpha-glucan level during vegetative growth","type":"exact"},{"name":"decreased spore wall alpha-glucan level","type":"exact"},{"name":"reduced ascospore wall alpha-glucan level","type":"exact"}],"termid":"FYPO:0007493"}


id: PBO:0038576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRAXAS1 pseudogene 1","termid":"PBO:0038576"}


id: MONDO:0007711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bencze syndrome or hemifacial hyperplasia with strabismus is a malformation syndrome involving the abnormal growth of the facial skeleton as well as its soft tissue structure and organs, and is characterized by mild facial asymmetry with unaffected neurocranium and eyeballs, as well as by esotropia, amblyopia and/or convergent strabismus, and occasionally submucous cleft palate. Transmission is autosomal dominant. There have been no further descriptions in the literature since 1979.","definition_xrefs":["Orphanet:1241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bencze syndrome","secondary_identifiers":["MESH:C564199","OMIM:141350","MEDGEN:330655","SCTID:733046006","UMLS:C1841640","GARD:2633"],"synonyms":[{"name":"Bencze syndrome","type":"exact"},{"name":"hemifacial hyperplasia strabismus","type":"related"},{"name":"hemifacial hyperplasia with strabismus","type":"related"},{"name":"hemifacial hyperplasia-strabismus syndrome","type":"exact"}],"termid":"MONDO:0007711","xrefs":{"Monarch":{"xref_id":"0007711"}}}


id: PBO:0069003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 247, pseudogene","termid":"PBO:0069003"}


id: MONDO:0000600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A specific phobia that involves an irrational fear of contracting a disease.","definition_xrefs":["DOID:0060048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific phobia","termid":"MONDO:0012000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nosophobia","secondary_identifiers":["UMLS:C0522182","MEDGEN:637105"],"termid":"MONDO:0000600","xrefs":{"Monarch":{"xref_id":"0000600"}}}


id: GO:0034067
data:
  {"annotated_genes":["SJAG_01516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98520],"is_not":false,"summary":null,"term":"GO:0034067"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to Golgi apparatus","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072600","GO:0000042"],"synonyms":[{"name":"establishment of protein localisation to Golgi","type":"narrow"},{"name":"establishment of protein localization in Golgi","type":"narrow"},{"name":"establishment of protein localization to Golgi","type":"narrow"},{"name":"establishment of protein localization to Golgi apparatus","type":"narrow"},{"name":"protein localisation in Golgi apparatus","type":"exact"},{"name":"protein localization in Golgi apparatus","type":"exact"},{"name":"protein targeting to Golgi","type":"related"},{"name":"protein-Golgi targeting","type":"related"}],"termid":"GO:0034067","terms_by_termid":{"GO:0034067":null}}


id: GO:0047614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-aconitate = cis-aconitate.","definition_xrefs":["RHEA:17265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"aconitate delta-isomerase activity","secondary_identifiers":["KEGG_REACTION:R02244","MetaCyc:ACONITATE-DELTA-ISOMERASE-RXN","EC:5.3.3.7"],"synonyms":[{"name":"aconitate D-isomerase activity","type":"exact"},{"name":"aconitate delta2-delta3-isomerase activity","type":"related"},{"name":"aconitate isomerase activity","type":"broad"}],"termid":"GO:0047614"}


id: PBO:0029570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore","termid":"PBO:0029570"}


id: GO:0030984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kininogen, a kinin precursor.","definition_xrefs":["GOC:mah","PMID:9520414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"kininogen binding","termid":"GO:0030984"}


id: PR:P87127
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase mitochondrial F1 complex assembly factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00582","PANTHER:PTHR13126:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein atp11, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.12","secondary_identifiers":["UniProtKB:P87127"],"synonyms":[{"name":"Spom972h-ATPAF1","type":"exact"}],"termid":"PR:P87127"}


id: GO:0008256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + protein L-histidine = ADP + protein N(pi)-phospho-L-histidine.","definition_xrefs":["EC:2.7.13.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein histidine kinase activity","termid":"GO:0004673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0004672","GO:0140096","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"protein histidine pros-kinase activity","secondary_identifiers":["RHEA:22720","MetaCyc:2.7.13.1-RXN"],"synonyms":[{"name":"ATP:protein-L-histidine N-pros-phosphotransferase activity","type":"related"},{"name":"ATP:protein-L-histidine Npi-phosphotransferase activity","type":"exact"},{"name":"protein-histidine pros-kinase activity","type":"exact"}],"termid":"GO:0008256"}


id: GO:0098025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Multiprotein component at the distal (head) end of the virus tail to which fibers of tailed viruses may be attached.","definition_xrefs":["GOC:bm","VZ:3957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"virus tail","termid":"GO:0098015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail, baseplate","synonyms":[{"name":"bacteriophage baseplate","type":"narrow"},{"name":"tail structure","type":"related"},{"name":"tail tip","type":"related"}],"termid":"GO:0098025"}


id: PBO:0087874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional modulator; involved in regulation of meiosis, silencing, and expression of RNR genes; involved in response to replication stress; contains WD repeats; relocalizes to the cytosol in response to hypoxia; WTM2 has a paralog, UME1, that arose from the whole genome duplication","termid":"PBO:0087874"}


id: PBO:0085389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane localized uracil permease; expression is tightly regulated by uracil levels and environmental cues; conformational alterations induced by unfolding or substrate binding result in Rsp5p-mediated ubiquitination and degradation","termid":"PBO:0085389"}


id: PBO:0064072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 106","termid":"PBO:0064072"}


id: PBO:0086252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that negatively regulates the SCF E3-ubiquitin ligase; regulates by interacting with and preventing neddyation of the cullin subunit, Cdc53p; longevity determinant that is preferentially expressed in young cells; similar to mammalian Cand1","termid":"PBO:0086252"}


id: PBO:0005487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A alpha","termid":"PBO:0005487"}


id: PBO:0004548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 h3.3","termid":"PBO:0004548"}


id: GO:0015332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete leucine/valine/isoleucine permease activity (obsolete GO:0015332)","synonyms":[{"name":"leucine/valine/isoleucine permease activity","type":"exact"}],"termid":"GO:0015332"}


id: PBO:0033767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_pole_body_duplication","termid":"PBO:0033767"}


id: GO:1901687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glutathione derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"glutathione derivative metabolic process","termid":"GO:1901685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione derivative biosynthetic process","secondary_identifiers":["Reactome:R-HSA-156590"],"synonyms":[{"name":"glutathione derivative anabolism","type":"exact"},{"name":"glutathione derivative biosynthesis","type":"exact"},{"name":"glutathione derivative formation","type":"exact"},{"name":"glutathione derivative synthesis","type":"exact"}],"termid":"GO:1901687"}


id: PBO:0050239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 17","termid":"PBO:0050239"}


id: PR:O60179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.04c","synonyms":[{"name":"Spom972h-utp10","type":"exact"},{"name":"U3 protein 10 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60179"}


id: GO:0015859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"},{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"intracellular nucleoside transport","termid":"GO:0015859"}


id: PBO:0039585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANO3 antisense RNA 1","termid":"PBO:0039585"}


id: MONDO:0859301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with craniofacial dysmorphism and skeletal defects","secondary_identifiers":["OMIM:620083","Orphanet:662207","MEDGEN:1824008","UMLS:C5774235"],"termid":"MONDO:0859301","xrefs":{"Monarch":{"xref_id":"0859301"}}}


id: MONDO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the glottic area of the larynx. The vast majority of cases represent squamous cell carcinomas.","definition_xrefs":["NCIT:C3544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"},{"relation_name":"is_a","term_name":"glottis neoplasm","termid":"MONDO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"glottis cancer","secondary_identifiers":["MEDGEN:57560","SCTID:187841006","DOID:2595","UMLS:C0153483","ICD9:161.0"],"synonyms":[{"name":"Ca larynx - glottis","type":"exact"},{"name":"cancer of glottis","type":"exact"},{"name":"glottis cancer","type":"exact"},{"name":"malignant glottis neoplasm","type":"exact"},{"name":"malignant glottis tumor","type":"exact"},{"name":"malignant glottis tumour","type":"exact"},{"name":"malignant neoplasm of glottis","type":"exact"},{"name":"malignant neoplasm of the glottis","type":"exact"},{"name":"malignant tumor of glottis","type":"exact"},{"name":"malignant tumor of the glottis","type":"exact"},{"name":"malignant tumour of glottis","type":"exact"},{"name":"malignant tumour of the glottis","type":"exact"}],"termid":"MONDO:0002351","xrefs":{"Monarch":{"xref_id":"0002351"}}}


id: PBO:0088277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-1-pyrroline-5-carboxylate reductase Pro3","termid":"PBO:0088277"}


id: GO:0021832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of cells to one another to form groups of cells involved in cerebral cortex tangential migration.","definition_xrefs":["PMID:12626695","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"cerebral cortex tangential migration using cell-cell interactions","termid":"GO:0021823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion involved in cerebral cortex tangential migration using cell-cell interactions","termid":"GO:0021832"}


id: GO:0140004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 serotonylated at glutamine 5.","definition_xrefs":["PMID:34144982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0140566","GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"histone H3Q5ser reader activity","synonyms":[{"name":"H3Q5-serotonin histone reader activity","type":"exact"},{"name":"H3Q5-serotonin modified histone binding","type":"narrow"}],"termid":"GO:0140004"}


id: PBO:0082596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class I histone deacetylase (HDAC) family member; deacetylates Smc3p on lysine residues at anaphase onset; has sequence similarity to Hda1p, Rpd3p, Hos2p, and Hos3p; interacts with the Tup1p-Ssn6p corepressor complex","termid":"PBO:0082596"}


id: PBO:0064716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 52","termid":"PBO:0064716"}


id: PBO:0079221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTBK2 antisense RNA 1","termid":"PBO:0079221"}


id: MONDO:0000725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Simpson-Golabi-Behmel syndrome (obsolete MONDO:0000725)","termid":"MONDO:0000725","xrefs":{"Monarch":{"xref_id":"0000725"}}}


id: PBO:0073567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shiftless antiviral inhibitor of ribosomal frameshifting","termid":"PBO:0073567"}


id: PATO:0001821
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having no opening.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imperforate","termid":"PATO:0001821"}


id: GO:1902163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:17719541"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (obsolete GO:1902163)","synonyms":[{"name":"down regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"narrow"}],"termid":"GO:1902163"}


id: GO:0005808
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi-plasma membrane transport vesicle (obsolete GO:0005808)","synonyms":[{"name":"Golgi-plasma membrane transport vesicle","type":"exact"}],"termid":"GO:0005808"}


id: GO:1901078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of relaxation of muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"negatively_regulates","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of relaxation of muscle","synonyms":[{"name":"down regulation of relaxation of muscle","type":"exact"},{"name":"down-regulation of relaxation of muscle","type":"exact"},{"name":"downregulation of relaxation of muscle","type":"exact"},{"name":"inhibition of relaxation of muscle","type":"narrow"}],"termid":"GO:1901078"}


id: GO:0160173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of histamine from one side of a membrane to the other.","definition_xrefs":["PMID:36288320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"histamine transmembrane transporter activity","termid":"GO:0160173"}


id: PBO:0051027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 7","termid":"PBO:0051027"}


id: PBO:0089376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF Sec74","termid":"PBO:0089376"}


id: PR:Q96VG3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC683.03 gene.","definition_xrefs":["UniProtKB:Q96VG3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C683.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC683.03","synonyms":[{"name":"Spom972h-SPAC683.03","type":"exact"}],"termid":"PR:Q96VG3"}


id: GO:0004731
data:
  {"annotated_genes":["SJAG_03881","SJAG_01359"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78894],"is_not":false,"summary":null,"term":"GO:0004731"},{"annotations":[77628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017061"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01359":null,"SJAG_03881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"purine-nucleoside phosphorylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9735775","Reactome:R-HSA-112033","Reactome:R-HSA-9735789","Reactome:R-HSA-9755044","Reactome:R-HSA-112034","RHEA:19805","Reactome:R-HSA-74242","Reactome:R-HSA-74249","MetaCyc:PNP-RXN"],"synonyms":[{"name":"PNPase activity","type":"related"},{"name":"PUNPI","type":"related"},{"name":"PUNPII","type":"related"},{"name":"inosine phosphorylase activity","type":"narrow"},{"name":"inosine-guanosine phosphorylase activity","type":"related"},{"name":"purine deoxynucleoside phosphorylase activity","type":"related"},{"name":"purine deoxyribonucleoside phosphorylase activity","type":"related"},{"name":"purine nucleoside phosphorylase activity","type":"related"},{"name":"purine ribonucleoside phosphorylase activity","type":"related"},{"name":"purine-nucleoside:phosphate ribosyltransferase activity","type":"related"}],"termid":"GO:0004731","terms_by_termid":{"GO:0004731":null,"GO:0017061":null}}


id: PBO:0027046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_2-oxoglutarate_dioxygenase_activity","termid":"PBO:0027046"}


id: PBO:0041303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2CD5 antisense RNA 1","termid":"PBO:0041303"}


id: PBO:0028602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_glucose_starvation","termid":"PBO:0028602"}


id: MONDO:0002818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenal cortical adenocarcinoma (obsolete MONDO:0002818)","termid":"MONDO:0002818","xrefs":{"Monarch":{"xref_id":"0002818"}}}


id: GO:0061961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency or rate of heme oxygenase activity.","definition_xrefs":["GOC:rph","GOC:BHF","PMID:24844779","GOC:BHF_miRNA"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of heme oxygenase activity (obsolete GO:0061961)","termid":"GO:0061961"}


id: PBO:0005038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fun thirty related protein Fft2 (predicted)","termid":"PBO:0005038"}


id: PATO:0000694
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which starts earlier than the natural start time or the reference process.","definition_xrefs":["PATO:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"onset quality","termid":"PATO:0002325"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature","secondary_identifiers":["PATO:0002086","PATO:0000691"],"synonyms":[{"name":"advanced","type":"exact"},{"name":"early","type":"related"},{"name":"precocious","type":"related"}],"termid":"PATO:0000694"}


id: PBO:0049093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 150","termid":"PBO:0049093"}


id: MONDO:0021539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hamartoma (disease) that involves the cutaneous appendage.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal appendage tumor","termid":"MONDO:0002297"},{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hamartoma of skin appendage","secondary_identifiers":["UMLS:C1302712","MEDGEN:224909","SCTID:399906000","ICD9:759.6","NCIT:C5562"],"synonyms":[{"name":"cutaneous appendage hamartoma (disease)","type":"exact"},{"name":"skin appendage hamartoma","type":"exact"}],"termid":"MONDO:0021539","xrefs":{"Monarch":{"xref_id":"0021539"}}}


id: GO:0016720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a (9Z)-octadec-9-en-12-ynoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"acyl-lipid Delta(12)-acetylenase","secondary_identifiers":["EC:1.14.19.39","MetaCyc:1.14.99.33-RXN","KEGG_REACTION:R05740"],"synonyms":[{"name":"D12-fatty acid dehydrogenase activity","type":"exact"},{"name":"Delta12 fatty acid acetylenase","type":"exact"},{"name":"delta12-fatty acid dehydrogenase activity","type":"related"},{"name":"linoleate delta-12-fatty acid acetylenase (desaturase) activity","type":"exact"}],"termid":"GO:0016720"}


id: PBO:0084867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S10 ribosomal protein; essential for viability, unlike most other mitoribosomal proteins","termid":"PBO:0084867"}


id: PBO:0075768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 1","termid":"PBO:0075768"}


id: MONDO:0100347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"excluded_subClassOf","term_name":"obsolete gastroenteropancreatic neuroendocrine neoplasm (obsolete MONDO:0015078)","termid":"MONDO:0015078"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carcinoid syndrome","secondary_identifiers":["EFO:1000852","NCIT:C3215","MEDGEN:6191","MedDRA:10007270","ICD10CM:E34.0","NORD:890","GARD:5994","ICD9:259.2","icd11.foundation:111763187","Orphanet:100093","SCTID:35868009","UMLS:C0024586"],"synonyms":[{"name":"carcinoid syndrome","type":"exact"},{"name":"carcinoid tumor syndrome","type":"related"},{"name":"carcinoid tumors, intestinal","type":"related"},{"name":"carcinoid tumour syndrome","type":"related"},{"name":"malignant carcinoid syndrome","type":"exact"}],"termid":"MONDO:0100347","xrefs":{"Monarch":{"xref_id":"0100347"}}}


id: GO:1990649
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108093],"is_not":false,"summary":null,"term":"GO:1990649"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,2,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,2,4-trisphosphate + phosphate.","definition_xrefs":["GOC:al","PMID:15316017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol-1,2,4,5-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990649","terms_by_termid":{"GO:1990649":null}}


id: PBO:0090268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap123","termid":"PBO:0090268"}


id: GO:0097393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of telomeric repeat-containing RNA from a DNA template. A telomere is a complex of DNA and proteins that seals the end of a chromosome.","definition_xrefs":["GOC:al","PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"telomeric repeat-containing RNA transcription","synonyms":[{"name":"TERRA transcription","type":"exact"}],"termid":"GO:0097393"}


id: GO:1900806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of ergot alkaloid.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete ergot alkaloid catabolic process (obsolete GO:1900806)","synonyms":[{"name":"ergot alkaloid breakdown","type":"exact"},{"name":"ergot alkaloid catabolism","type":"exact"},{"name":"ergot alkaloid degradation","type":"exact"},{"name":"ergot alkaloids breakdown","type":"related"},{"name":"ergot alkaloids catabolic process","type":"related"},{"name":"ergot alkaloids catabolism","type":"related"},{"name":"ergot alkaloids degradation","type":"related"}],"termid":"GO:1900806"}


id: PBO:0076706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 7","termid":"PBO:0076706"}


id: MONDO:0027694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 23","secondary_identifiers":["DOID:0080225","OMIM:617839","GARD:16262","MEDGEN:1645924","UMLS:C4693381"],"synonyms":[{"name":"ALS23","type":"exact"},{"name":"amyotrophic lateral sclerosis 23","type":"related"}],"termid":"MONDO:0027694","xrefs":{"Monarch":{"xref_id":"0027694"}}}


id: MONDO:0019621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic pneumonitis of infancy is a rare pediatric form of interstitial lung disease (ILD).","definition_xrefs":["Orphanet:91359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to infancy","termid":"MONDO:0017019"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic pneumonitis of infancy","secondary_identifiers":["GARD:19166","icd11.foundation:1821220054","MEDGEN:846677","UMLS:C3872848","SCTID:708026002"],"synonyms":[{"name":"CPI","type":"exact"}],"termid":"MONDO:0019621","xrefs":{"Monarch":{"xref_id":"0019621"}}}


id: CHEBI:32588
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A metal chloride salt with a K(+) counterion.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium chloride","termid":"CHEBI:32588"}


id: PBO:0080613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 47","termid":"PBO:0080613"}


id: PBO:0066196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 15","termid":"PBO:0066196"}


id: GO:1902393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of exodeoxyribonuclease activity.","definition_xrefs":["GOC:TermGenie","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of exodeoxyribonuclease activity (obsolete GO:1902393)","synonyms":[{"name":"down regulation of exodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of exodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of exodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of exodeoxyribonuclease activity","type":"narrow"}],"termid":"GO:1902393"}


id: PBO:0073467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sideroflexin 3","termid":"PBO:0073467"}


id: PATO:0001265
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of blue hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blue","termid":"PATO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated blue","synonyms":[{"name":"bright blue","type":"related"}],"termid":"PATO:0001265"}


id: PBO:0045121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMRT like family C1B","termid":"PBO:0045121"}


id: PBO:0017018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small acidic protein (SMAP) domain containing protein","termid":"PBO:0017018"}


id: PBO:0001746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium ion transporter Trk1","termid":"PBO:0001746"}


id: PR:Q9UTB6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sds3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTB6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein sds3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.02","synonyms":[{"name":"Spom972h-sds3","type":"exact"},{"name":"clr6 histone deacetylase complex I subunit Sds3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTB6"}


id: PBO:0064045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 79","termid":"PBO:0064045"}


id: MONDO:0100364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any herpes simplex type 1 infectious disease that involves the genitals.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genital herpes","termid":"MONDO:0005770"},{"relation_name":"is_a","term_name":"herpes simplex type 1 infectious disease","termid":"MONDO:0100359"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genital herpes simplex type 1 infectious disorder","termid":"MONDO:0100364","xrefs":{"Monarch":{"xref_id":"0100364"}}}


id: GO:0016569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration of DNA or protein in chromatin by the covalent addition or removal of chemical groups.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete covalent chromatin modification (obsolete GO:0016569)","synonyms":[{"name":"chromatin modification","type":"exact"}],"termid":"GO:0016569"}


id: PBO:0054068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1415","termid":"PBO:0054068"}


id: PBO:0069415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 677, pseudogene","termid":"PBO:0069415"}


id: FYPO:0004371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by the S-phase DNA damage checkpoint is lower than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of S-phase DNA damage checkpoint","synonyms":[{"name":"decreased duration of S-phase DNA damage checkpoint activation","type":"exact"},{"name":"decreased duration of S-phase DNA damage checkpoint during mitotic cell cycle","type":"related"},{"name":"decreased duration of S-phase DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"decreased duration of intra-S DNA damage checkpoint","type":"exact"},{"name":"decreased duration of mitotic S-phase DNA damage checkpoint","type":"exact"},{"name":"premature S-phase DNA damage checkpoint deactivation","type":"related"},{"name":"reduced duration of S-phase DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0004371"}


id: MONDO:0043073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zadik-Barak-Levin syndrome","secondary_identifiers":["MESH:C536721","UMLS:C2931298","MEDGEN:444023"],"synonyms":[{"name":"dermoid cysts, hypothyroidism, cleft palate and hypodontia","type":"related"},{"name":"dermoid cysts, hypothyroidism, cleft palate, and hypodontia","type":"related"}],"termid":"MONDO:0043073","xrefs":{"Monarch":{"xref_id":"0043073"}}}


id: PBO:0061417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide Y receptor Y2","termid":"PBO:0061417"}


id: PBO:0080031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 17","termid":"PBO:0080031"}


id: PBO:0057100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 194-1","termid":"PBO:0057100"}


id: PBO:0081946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 2","termid":"PBO:0081946"}


id: PR:Q09094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.14","synonyms":[{"name":"Spom972h-rec15","type":"exact"}],"termid":"PR:Q09094"}


id: PBO:0054416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1812","termid":"PBO:0054416"}


id: PBO:0061393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin/nucleoplasmin 2","termid":"PBO:0061393"}


id: PBO:0041988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 32","termid":"PBO:0041988"}


id: PBO:0113379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ferric reductase with similarity to Fre2p; expression induced by low iron levels; targeted to vacuole via AP-3 pathway","termid":"PBO:0113379"}


id: GO:0097714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.","definition_xrefs":["PMID:7061416","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to viscosity","termid":"GO:0097714"}


id: PBO:0003426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2AF large subunit (U2AF-59)","termid":"PBO:0003426"}


id: PBO:0004746
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GNL3L","termid":"PBO:0004746"}


id: GO:0006671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytosphingosine, (2S,3S,4R)-2-aminooctadecane-1,3,4-triol, a constituent of many plant sphingolipids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"phytosphingosine metabolic process","synonyms":[{"name":"phytosphingosine metabolism","type":"exact"}],"termid":"GO:0006671"}


id: MONDO:0016471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pachyonychia congenita (PC) is a rare genodermatosis predominantly featuring painful palmoplantar keratoderma, thickened nails, cysts and whitish oral mucosa.","definition_xrefs":["Orphanet:2309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pachyonychia congenita","secondary_identifiers":["MEDGEN:78556","DOID:0050449","NORD:1542","GARD:10753","MESH:D053549","icd11.foundation:1446983705","UMLS:C0265334","OMIMPS:167200","NCIT:C84986"],"synonyms":[{"name":"Jackson-Lawler type pachyonychia congenita","type":"exact"},{"name":"Jadassohn-Lewandowsky syndrome","type":"exact"},{"name":"PC","type":"exact"},{"name":"congenital pachyonychia","type":"related"},{"name":"pachyonychia congenita syndrome","type":"related"},{"name":"pachyonychia congenita type 1","type":"narrow"},{"name":"pachyonychia congenita, Jadassohn-Lewandowsky type","type":"exact"}],"termid":"MONDO:0016471","xrefs":{"Monarch":{"xref_id":"0016471"}}}


id: PBO:0066382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radixin pseudogene 2","termid":"PBO:0066382"}


id: _global:regulates_o_results_in_commitment_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relation that applies between a process that regulates cell fate commitment and the cell type that the regulated process results in commitment to.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_commitment_to","secondary_identifiers":["GOREL:0001022"],"synonyms":[{"name":"regulates_o_results_in_commitment_to","type":"exact"}],"termid":"_global:regulates_o_results_in_commitment_to"}


id: PBO:0064713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 49","termid":"PBO:0064713"}


id: PBO:0085830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085830"}


id: PBO:0084933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA N6-adenosine methyltransferase; essential for meiosis in S288C but dispensable for meiosis in SK1, mediates N6-adenosine methylation of bulk mRNA during the induction of sporulation which includes the meiotic regulators IME1, IME2 and IME4 itself; repressed in haploids via production of antisense IME4 transcripts; transcribed in diploid cells where antisense transcription is repressed; orthologous to human METTL3 (MT-A70)","termid":"PBO:0084933"}


id: PBO:0072222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 5","termid":"PBO:0072222"}


id: RO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"RO:0002428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_negative_regulation_of","termid":"RO:0002430"}


id: PBO:0038989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor beta 3","termid":"PBO:0038989"}


id: MONDO:0012015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus 3, congenital, autosomal dominant","secondary_identifiers":["MESH:C537855","DOID:0111793","UMLS:C1842186","OMIM:608345","MEDGEN:374873"],"synonyms":[{"name":"NYS3","type":"exact"},{"name":"NYSTAGMUS 3, congenital, autosomal dominant","type":"related"}],"termid":"MONDO:0012015","xrefs":{"Monarch":{"xref_id":"0012015"}}}


id: MONDO:0018637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive disease characterized by the buildup in the blood of fat particles called chylomicrons (chylomicronemia), severe hypertriglyceridemia, and the risk of recurrent and potentially fatal pancreatitis and other complications. It is caused by mutations in the gene encoding LPL or, less frequently, by mutations in genes encoding other proteins necessary for LPL function.","definition_xrefs":["PMID:22239554","PMID:25470695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial chylomicronemia syndrome","secondary_identifiers":["DOID:0111417","MEDGEN:1778100","GARD:6414","Orphanet:444490","UMLS:C5442313"],"termid":"MONDO:0018637","xrefs":{"Monarch":{"xref_id":"0018637"}}}


id: PBO:0070626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 10","termid":"PBO:0070626"}


id: PBO:0051006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin (CD79A) binding protein 1 pseudogene 4","termid":"PBO:0051006"}


id: PBO:0039867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene","termid":"PBO:0039867"}


id: MONDO:0013456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megaloblastic anemia","termid":"MONDO:0001700"},{"relation_name":"is_a","term_name":"inherited deficiency anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"disorder of folate metabolism and transport","termid":"MONDO:0017313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005066","MONDO:0002280"],"is_obsolete":false,"name":"constitutional megaloblastic anemia with severe neurologic disease","secondary_identifiers":["MEDGEN:462555","MESH:C565095","GARD:11000","Orphanet:319651","SCTID:124178006","OMIM:613839","UMLS:C3151205"],"synonyms":[{"name":"DHFR deficiency","type":"exact"},{"name":"dihydrofolate reductase deficiency","type":"exact"},{"name":"megaloblastic anaemia due to dihydrofolate reductase deficiency","type":"related"},{"name":"megaloblastic anemia due to dihydrofolate reductase deficiency","type":"related"}],"termid":"MONDO:0013456","xrefs":{"Monarch":{"xref_id":"0013456"}}}


id: GO:0030153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates resistance to a bacteriocin: any of a heterogeneous group of polypeptide antibiotics that are secreted by certain bacterial strains and are able to kill cells of other susceptible (frequently related) strains after adsorption at specific receptors on the cell surface. They include the colicins, and their mechanisms of action vary.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"bacteriocin immunity","termid":"GO:0030153"}


id: MONDO:1012228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, non-human animal","termid":"MONDO:1011977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, sheep","secondary_identifiers":["OMIA:000830-9940"],"termid":"MONDO:1012228","xrefs":{"Monarch":{"xref_id":"1012228"}}}


id: PBO:0079952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 5","termid":"PBO:0079952"}


id: GO:0120074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell differentiation, the process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cushion cell.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"regulates","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endocardial cushion cell differentiation","termid":"GO:0120074"}


id: MONDO:0035759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor V atlanta bleeding disorder","secondary_identifiers":["Orphanet:600194","GARD:22415","MEDGEN:1842929","UMLS:C5681543"],"termid":"MONDO:0035759","xrefs":{"Monarch":{"xref_id":"0035759"}}}


id: PBO:0057769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2115","termid":"PBO:0057769"}


id: PBO:0003477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation termination factor Rrf1","termid":"PBO:0003477"}


id: PBO:0079184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 13, pseudogene","termid":"PBO:0079184"}


id: MONDO:0003047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, non-small cell, poorly differentiated thymic neuroendocrine carcinoma, characterized by the presence of a high mitotic rate and, almost always, necrosis.","definition_xrefs":["NCIT:C6461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large cell neuroendocrine carcinoma","termid":"MONDO:0005057"},{"relation_name":"is_a","term_name":"thymic neuroendocrine carcinoma","termid":"MONDO:0020516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"thymic large cell neuroendocrine carcinoma","secondary_identifiers":["MEDGEN:235250","UMLS:C1334364","DOID:4553"],"synonyms":[{"name":"Thymus large cell carcinoma","type":"exact"},{"name":"large cell carcinoma of the Thymus","type":"exact"},{"name":"large cell neuroendocrine carcinoma of Thymus","type":"exact"},{"name":"large cell neuroendocrine carcinoma of the Thymus","type":"exact"},{"name":"large cell neuroendocrine carcinoma of thymus","type":"exact"},{"name":"thymic LCNEC","type":"exact"},{"name":"thymic large cell neuroendocrine carcinoma","type":"exact"},{"name":"thymus large cell carcinoma","type":"exact"},{"name":"thymus large cell neuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0003047","xrefs":{"Monarch":{"xref_id":"0003047"}}}


id: MONDO:0021896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"spinal cord ischemia","termid":"MONDO:0020688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior spinal artery stroke","secondary_identifiers":["UMLS:C2931608","MEDGEN:419851","MESH:C537776"],"termid":"MONDO:0021896","xrefs":{"Monarch":{"xref_id":"0021896"}}}


id: GO:1901456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to toluene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to toluene","termid":"GO:1901454"},{"relation_name":"positively_regulates","term_name":"response to toluene","termid":"GO:1901424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to toluene","synonyms":[{"name":"activation of response to toluene","type":"narrow"},{"name":"up regulation of response to toluene","type":"exact"},{"name":"up-regulation of response to toluene","type":"exact"},{"name":"upregulation of response to toluene","type":"exact"}],"termid":"GO:1901456"}


id: PBO:0047519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEZF1 antisense RNA 1","termid":"PBO:0047519"}


id: MONDO:0100408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(16;21)(q24;q22). (A cytogenetic abnormality that refers to the translocation of the long arm (q24) of chromosome 16 and the long arm (q22) of chromosome 22. It is associated with RUNX1/CBFA2T3 fusions, myelodysplastic syndromes and acute myeloid leukemia.)","definition_xrefs":["NCIT:C168773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, t(16;21)(q24;q22)","synonyms":[{"name":"AML, t(16;21)(q24;q22)","type":"exact"}],"termid":"MONDO:0100408","xrefs":{"Monarch":{"xref_id":"0100408"}}}


id: PBO:0047483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 10","termid":"PBO:0047483"}


id: PBO:0058387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4759","termid":"PBO:0058387"}


id: PBO:0048827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 12","termid":"PBO:0048827"}


id: GO:0034417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2,3-bisphosphoglycerate + H2O = (2R)-2-phosphoglycerate + phosphate.","definition_xrefs":["GOC:mah","PMID:18413611","RHEA:27381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"bisphosphoglycerate 3-phosphatase activity","secondary_identifiers":["MetaCyc:RXN-11102","KEGG_REACTION:R09532","EC:3.1.3.80"],"synonyms":[{"name":"2,3-bisphospho-D-glycerate 3-phosphohydrolase activity","type":"related"}],"termid":"GO:0034417"}


id: PBO:0016084
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structurte updated","termid":"PBO:0016084"}


id: GO:0060607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell along the edges of two epithelial folds, giving rise to the lumen of an epithelial tube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"tube closure","termid":"GO:0060606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion involved in sealing an epithelial fold","termid":"GO:0060607"}


id: GO:0015337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Me2+(out) + H+(out) = Me2+(in) + H+(in). Me can be Mn2+ or Cu2+.","definition_xrefs":["TC:2.A.55.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete low affinity metal ion uptake transporter activity (obsolete GO:0015337)","synonyms":[{"name":"low affinity metal ion uptake transporter activity","type":"exact"}],"termid":"GO:0015337"}


id: PBO:0090911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane NiCoT heavy metal ion transmembrane transporter Nic1","termid":"PBO:0090911"}


id: GO:0060690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquire specialized structural and/or functional features of an epithelial cell of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"cell differentiation involved in salivary gland development","termid":"GO:0060689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in salivary gland development","termid":"GO:0060690"}


id: PBO:0062384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 2 pseudogene","termid":"PBO:0062384"}


id: PBO:0003678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family Isp4","termid":"PBO:0003678"}


id: GO:0001780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of neutrophils such that the total number of neutrophils within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:add","PMID:12752675","PMID:12960266","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"},{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil homeostasis","termid":"GO:0001780"}


id: PBO:0044575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBH antisense RNA 1","termid":"PBO:0044575"}


id: PBO:0029507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_spore_with_abnormal_shape","termid":"PBO:0029507"}


id: GO:0140029
data:
  {"annotated_genes":["SJAG_01772","SJAG_03357","SJAG_03499","SJAG_03005","SJAG_04044","SJAG_03938","SJAG_02320","SJAG_04960","SJAG_02166","SJAG_01697","SJAG_04966","SJAG_00280","SJAG_02587","SJAG_01925","SJAG_03864"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118011,74756,79910,69530,60168,79606,90370,92128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006904"},{"annotations":[117524,90541,113947,60170,88412,65870,101719,99353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"The cellular processes that contribute to exocytosis.","definition_xrefs":["Wikipedia:Exocytosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"exocytosis","termid":"GO:0006887"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_03005":null,"SJAG_03357":null,"SJAG_03499":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04960":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"exocytic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140029","terms_by_termid":{"GO:0006904":null,"GO:0090522":null}}


id: PBO:0082299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aromatic aminotransferase II; catalyzes the first step of tryptophan, phenylalanine, and tyrosine catabolism; involved with Aro8p in production of kynurenic acid to detoxify excess tryptophan","termid":"PBO:0082299"}


id: PBO:0029575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_DEM","termid":"PBO:0029575"}


id: PBO:0045855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 45","termid":"PBO:0045855"}


id: FYPO:0001938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cytochrome-c oxidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal cytochrome-c oxidase activity","termid":"FYPO:0001937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000002","FYPO:0000661","FYPO:0000707","FYPO:0002114","FYPO:0001985","FYPO:0005447","FYPO:0000652","FYPO:0000138"],"is_obsolete":false,"name":"decreased cytochrome-c oxidase activity","synonyms":[{"name":"reduced cytochrome-c oxidase activity","type":"exact"}],"termid":"FYPO:0001938"}


id: GO:1900634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentadecane.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane biosynthetic process","termid":"GO:0043447"},{"relation_name":"is_a","term_name":"pentadecane metabolic process","termid":"GO:1900633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentadecane biosynthetic process","synonyms":[{"name":"pentadecane anabolism","type":"exact"},{"name":"pentadecane biosynthesis","type":"exact"},{"name":"pentadecane formation","type":"exact"},{"name":"pentadecane synthesis","type":"exact"}],"termid":"GO:1900634"}


id: GO:0071810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of fever generation via regulation of the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fever generation","termid":"GO:0031620"},{"relation_name":"is_a","term_name":"regulation of prostaglandin secretion","termid":"GO:0032306"},{"relation_name":"regulates","term_name":"regulation of fever generation by prostaglandin secretion","termid":"GO:0100009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of fever generation by regulation of prostaglandin secretion","termid":"GO:0071810"}


id: PBO:0088619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk31","termid":"PBO:0088619"}


id: GO:0047297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-oxo acid + L-asparagine = an amino acid + 2-oxosuccinamate.","definition_xrefs":["RHEA:19813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"asparagine-oxo-acid transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.14-RXN","EC:2.6.1.14"],"synonyms":[{"name":"L-asparagine:2-oxo-acid aminotransferase activity","type":"related"},{"name":"asparagine--oxo-acid aminotransferase activity","type":"related"},{"name":"asparagine-keto acid aminotransferase activity","type":"related"},{"name":"asparagine-oxo-acid aminotransferase activity","type":"exact"}],"termid":"GO:0047297"}


id: MONDO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually pigmented, nodular or polypoid malignant neoplasm that originates from melanocytes and arises from the vulva. It presents with bleeding and dysuria.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulva cancer","termid":"MONDO:0001528"},{"relation_name":"is_a","term_name":"non-cutaneous melanoma","termid":"MONDO:0006320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar melanoma","secondary_identifiers":["NCIT:C40329","MEDGEN:66040","DOID:2093","HP:0030418","UMLS:C0241989","SCTID:254896002"],"synonyms":[{"name":"malignant melanoma of vulva","type":"exact"},{"name":"mammalian vulva melanoma","type":"exact"},{"name":"mammalian vulva melanoma (disease)","type":"exact"},{"name":"melanoma (disease) of mammalian vulva","type":"exact"},{"name":"vulvar melanoma","type":"exact"},{"name":"vulvar melanoma (disease)","type":"exact"}],"termid":"MONDO:0002205","xrefs":{"Monarch":{"xref_id":"0002205"}}}


id: SO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An alteration of the genome that leads to a change in the structure of one or more chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural_alteration","synonyms":[{"name":"structural alteration","type":"exact"}],"termid":"SO:0001785"}


id: GO:0050499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a NAD(P)+ to NAD(P)H.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with NAD(P)+ as acceptor","secondary_identifiers":["EC:1.20.1.-"],"termid":"GO:0050499"}


id: GO:0090149
data:
  {"annotated_genes":["SJAG_02848","SJAG_03464","SJAG_05261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94762,102301,102558],"is_not":false,"summary":null,"term":"GO:0090149"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the separation of a single continuous mitochondrial membrane into two membranes and contributes to mitochondrial fission.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane fission","termid":"GO:0090148"},{"relation_name":"part_of","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02848":null,"SJAG_03464":null,"SJAG_05261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007005"],"is_obsolete":false,"name":"mitochondrial membrane fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane fission involved in mitochondrial fission","type":"exact"},{"name":"mitochondrial membrane scission","type":"exact"}],"termid":"GO:0090149","terms_by_termid":{"GO:0090149":null}}


id: PBO:0082511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the DNA polymerase I alpha-primase complex; required for the initiation of DNA replication during mitotic DNA synthesis and premeiotic DNA synthesis","termid":"PBO:0082511"}


id: PBO:0058946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 5","termid":"PBO:0058946"}


id: GO:0010239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps involved in processing precursor RNAs arising from transcription of operons in the chloroplast genome into mature mRNAs.","definition_xrefs":["PMID:9648738","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"},{"relation_name":"is_a","term_name":"chloroplast RNA processing","termid":"GO:0031425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"chloroplast mRNA processing","termid":"GO:0010239"}


id: PBO:0064584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member E","termid":"PBO:0064584"}


id: PBO:0035967
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_checkpoint_complex_level","termid":"PBO:0035967"}


id: MONDO:0018132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Congenital muscular alpha-dystroglycanopathy with brain and eye anomalies (MDDGA) is a cobblestone lissencephaly characterized by and considered to be pathognomonic of a continuum of recessive autosomal disorders with brain, ocular and muscular involvement. MDDGA includes Walker-Warburg syndrome, muscle-eye-brain disease, Fukuyama muscular and cerebral dystrophy and muscle eye brain disease with bilateral multicystic leukodystrophy.","definition_xrefs":["Orphanet:352687"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital muscular alpha-dystroglycanopathy with brain and eye anomalies (obsolete MONDO:0018132)","secondary_identifiers":["DOID:0111229"],"synonyms":[{"name":"MDDGA","type":"exact"},{"name":"lissencephaly type 2 with muscular and ocular involvement","type":"exact"}],"termid":"MONDO:0018132","xrefs":{"Monarch":{"xref_id":"0018132"}}}


id: PBO:0044819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109B","termid":"PBO:0044819"}


id: GO:0010102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a lateral root are generated and organized. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic root morphogenesis","termid":"GO:0010101"},{"relation_name":"part_of","term_name":"lateral root development","termid":"GO:0048527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root morphogenesis","termid":"GO:0010102"}


id: MONDO:1011586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pituitary-dependent hyperadrenocorticism that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"},{"relation_name":"is_a","term_name":"pituitary-dependent hyperadrenocorticism, non-human animal","termid":"MONDO:1011400"},{"relation_name":"is_a","term_name":"hyperadrenocorticism, domestic cat","termid":"MONDO:1011531"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary-dependent hyperadrenocorticism, domestic cat","secondary_identifiers":["OMIA:000247-9685"],"termid":"MONDO:1011586","xrefs":{"Monarch":{"xref_id":"1011586"}}}


id: PBO:0055923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A11, pseudogene","termid":"PBO:0055923"}


id: PBO:0069171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 424, pseudogene","termid":"PBO:0069171"}


id: PBO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helix-hairpin-helix","termid":"PBO:0001320"}


id: GO:1902501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any HOPS complex that is part of a lysosomal membrane.","definition_xrefs":["GOC:TermGenie","PMID:23645161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar HOPS complex","termid":"GO:1902500"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773","GO:0032991"],"is_obsolete":false,"name":"lysosomal HOPS complex","synonyms":[{"name":"lysosomal membrane HOPS complex","type":"exact"}],"termid":"GO:1902501"}


id: PBO:0078187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 3-2 (pseudogene)","termid":"PBO:0078187"}


id: GO:1901844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication by electrical coupling involved in cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:17130302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"},{"relation_name":"regulates","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication by electrical coupling involved in cardiac conduction","termid":"GO:1901844"}


id: PBO:0049679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta","termid":"PBO:0049679"}


id: PBO:0030992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome_positioning","termid":"PBO:0030992"}


id: MONDO:0013548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase-2 deficiency","secondary_identifiers":["MEDGEN:90995","UMLS:C0342735","MESH:C536005","OMIM:614055"],"synonyms":[{"name":"ACAT2","type":"related"},{"name":"ACAT2 deficiency, Isolated cases","type":"exact"},{"name":"ACAT2D","type":"related"},{"name":"ACETYL-CoA acetyltransferase-2 deficiency","type":"related"},{"name":"Acat2 deficiency","type":"related"},{"name":"Acetocoenzyme A acetyltransferase 2","type":"related"},{"name":"Acetyl CoA acetyltransferase 2 deficiency","type":"related"},{"name":"acetoacetyl CoA thiolase, cytosolic","type":"related"},{"name":"acetyl-CoA acetyltransferase-2 deficiency","type":"exact"}],"termid":"MONDO:0013548","xrefs":{"Monarch":{"xref_id":"0013548"}}}


id: PBO:0091849
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CLA4","termid":"PBO:0091849"}


id: GO:0015886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"iron coordination entity transport","termid":"GO:1901678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"heme transport","synonyms":[{"name":"haem transport","type":"exact"}],"termid":"GO:0015886"}


id: GO:0050839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cell adhesion molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cell adhesion molecule binding","synonyms":[{"name":"CAM binding","type":"exact"},{"name":"adhesive extracellular matrix constituent","type":"related"},{"name":"cell adhesion molecule activity","type":"related"},{"name":"cell adhesion receptor activity","type":"related"}],"termid":"GO:0050839"}


id: MONDO:0000100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete trichorhinophalangeal syndrome (obsolete MONDO:0000100)","termid":"MONDO:0000100","xrefs":{"Monarch":{"xref_id":"0000100"}}}


id: PBO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RNF4","termid":"PBO:0001118"}


id: FYPO:0004472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is abolished, and the protein is instead present in the nucleolus, during a cellular response to latrunculin B.","definition_xrefs":["PMID:18951025","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B","synonyms":[{"name":"abolished protein localisation to cytoplasm with protein mislocalised to nucleolus during cellular response to latrunculin B","type":"exact"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to LatB","type":"exact"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cytoplasm with protein mislocalized to nucleolus during cellular response to latrunculin B during vegetative growth","type":"exact"},{"name":"protein localization to cytoplasm abolished with protein mislocalized to nucleolus during cellular response to latrunculin B","type":"exact"}],"termid":"FYPO:0004472"}


id: FYPO:0005818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the neddylation of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein neddylation","synonyms":[{"name":"normal protein neddylation during mitotic cell cycle","type":"related"},{"name":"normal protein neddylation during vegetative growth","type":"exact"},{"name":"normal protein/peptide neddylation","type":"exact"}],"termid":"FYPO:0005818"}


id: GO:0032167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An amorphous-appearing accumulation of septin proteins at the future site of cytokinesis.","definition_xrefs":["PMID:16009555"],"gene_count":0,"genotype_count":0,"name":"obsolete septin patch (obsolete GO:0032167)","synonyms":[{"name":"septin patch","type":"exact"}],"termid":"GO:0032167"}


id: GO:0180041
data:
  {"annotated_genes":["SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102836],"is_not":false,"summary":null,"term":"GO:0180041"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->4)-D-mannosyl-D-mannose linkage.","definition_xrefs":["PMID:15635094","PMID:11226175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid mannosyltransferase activity","termid":"GO:0004376"},{"relation_name":"is_a","term_name":"alpha-1,4-mannosyltransferase activity","termid":"GO:0051751"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glycolipid 1,4-alpha-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-MT-I activity","type":"exact"},{"name":"glycosylphosphatidylinositol-mannosyltransferase I","type":"exact"}],"termid":"GO:0180041","terms_by_termid":{"GO:0180041":null}}


id: FYPO:0002697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of methylenetetrahydrofolate reductase (NADPH) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"decreased methylenetetrahydrofolate reductase (NADPH) activity","synonyms":[{"name":"reduced methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"}],"termid":"FYPO:0002697"}


id: MONDO:0005054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete juvenile dermatomyositis (obsolete MONDO:0005054)","termid":"MONDO:0005054","xrefs":{"Monarch":{"xref_id":"0005054"}}}


id: MONDO:0001511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine exophthalmos","termid":"MONDO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotoxic exophthalmos","secondary_identifiers":["ICD9:376.21","DOID:12362","MEDGEN:509883","UMLS:C0155265","SCTID:19885005"],"termid":"MONDO:0001511","xrefs":{"Monarch":{"xref_id":"0001511"}}}


id: PBO:0058242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4529","termid":"PBO:0058242"}


id: GO:0180046
data:
  {"annotated_genes":["SJAG_00295","SJAG_04165","SJAG_01570","SJAG_02913","SJAG_02488","SJAG_04924","SJAG_01860","SJAG_03801","SJAG_04881","SJAG_04119","SJAG_06383","SJAG_03115","SJAG_04975","SJAG_06425","SJAG_03672","SJAG_02776","SJAG_03066","SJAG_04337","SJAG_03292","SJAG_01227","SJAG_05278","SJAG_03878","SJAG_05327","SJAG_00831","SJAG_01416","SJAG_00846","SJAG_03506","SJAG_00068","SJAG_02804","SJAG_02523"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74318,74328,75061,70399,70671],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[62452,75369,76183,72542,63366,77317,57834,73098,76286,76872,89340,77310,103503,87226,58343,58183,78049,72910,77320,58230,92793,69591,74618,60389,75392,77585,63027,103565,77674,71595],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006506"}]},"cv_name":"biological_process","definition":"Any process leading to the post-translational modification of a protein with a GPI anchor to achieve full functional capacity of the protein.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"GPI anchored protein biosynthesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"termid":"GO:0180046","terms_by_termid":{"GO:0006506":null,"GO:0016255":null}}


id: MOD:01224
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:126#K","PubMed:11710128","PubMed:3155470","PubMed:957432","OMSSA:40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-sulfanylpropanoyl (N-term and Lys)","termid":"MOD:00497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioacylation of primary amines - site K","synonyms":[{"name":"3,3-Dithio-bis-(sulfosuccinimidyl)propionate","type":"related"},{"name":"Thioacyl","type":"related"},{"name":"thioacetylk","type":"exact"},{"name":"thioacylation of primary amines (N-term and Lys)","type":"related"}],"termid":"MOD:01224"}


id: RO:0002200
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a biological entity and a phenotype. Here a phenotype is construed broadly as any kind of quality of an organism part, a collection of these qualities, or a change in quality or qualities (e.g. abnormally increased temperature). The subject of this relationship can be an organism (where the organism has the phenotype, i.e. the qualities inhere in parts of this organism), a genomic entity such as a gene or genotype (if modifications of the gene or the genotype causes the phenotype), or a condition such as a disease (such that if the condition inheres in an organism, then the organism has the phenotype).","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_phenotype","termid":"RO:0002200"}


id: PATO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being drawn together, compressed or squeezed physically.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constricted","secondary_identifiers":["PATO:0001837"],"synonyms":[{"name":"stenosis","type":"exact"},{"name":"stenotic","type":"exact"},{"name":"stricture","type":"exact"}],"termid":"PATO:0001847"}


id: PBO:0060769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B5","termid":"PBO:0060769"}


id: MONDO:0005944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by rhabdoviridae. Important infections include rabies; ephemeral fever; and vesicular stomatitis.","definition_xrefs":["MESH:D018353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mononegavirales infectious disease","termid":"MONDO:0005856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhabdoviridae infectious disease","secondary_identifiers":["MEDGEN:60221","UMLS:C0206751","EFO:0007469"],"synonyms":[{"name":"Rhabdoviridae infection","type":"related"},{"name":"infection, Rhabdoviridae","type":"related"},{"name":"infections, Rhabdoviridae","type":"related"}],"termid":"MONDO:0005944","xrefs":{"Monarch":{"xref_id":"0005944"}}}


id: MONDO:0015033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cerebral hemorrhage with amyloidosis, Dutch type (HCHWA-D) is a form of HCHWA, a group of familial central nervous system disorders, characterized by severe cerebral amyloid angiopathy (CAA), hemorrhagic and non-hemorrhagic strokes and dementia.","definition_xrefs":["Orphanet:100006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy, APP-related","termid":"MONDO:0011583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"ABeta amyloidosis, dutch type","secondary_identifiers":["GARD:16929","MEDGEN:419468","ICD10EXP:I68.0*","SCTID:56453003","ICD9:277.39","ICD10EXP:E85.4+","UMLS:C2931672"],"synonyms":[{"name":"ABetaE22Q amyloidosis","type":"exact"},{"name":"HCHWA, Dutch type","type":"exact"},{"name":"HCHWA-D","type":"exact"},{"name":"cerebral amyloid angiopathy, APP-related, Dutch variant","type":"exact"},{"name":"hereditary cerebral haemorrhage with amyloidosis, Dutch type","type":"exact"},{"name":"hereditary cerebral hemorrhage with amyloidosis, Dutch type","type":"exact"}],"termid":"MONDO:0015033","xrefs":{"Monarch":{"xref_id":"0015033"}}}


id: PBO:0054763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2175","termid":"PBO:0054763"}


id: FYPO:0000249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing ammonia as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002058","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on ammonia nitrogen source","secondary_identifiers":["FYPO:0000248"],"synonyms":[{"name":"decreased growth on ammonia nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on ammonia nitrogen source","type":"exact"},{"name":"growth defect, slow growth in minimal media","type":"related"},{"name":"growth defect, slow growth with ammonia nitrogen source","type":"narrow"},{"name":"reduced cell growth on ammonia nitrogen source","type":"exact"},{"name":"slow cell growth in minimal medium","type":"related"},{"name":"slow cell growth on ammonia nitrogen source","type":"narrow"}],"termid":"FYPO:0000249"}


id: PR:000050400
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-75 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-75, MOD:00047.","definition_xrefs":["PMID:23333317","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body-associated protein cut12 phosphorylated 2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"Spom-cut12/Phos:2","type":"exact"},{"name":"UniProtKB:O59755, Thr-75, MOD:00047","type":"narrow"}],"termid":"PR:000050400"}


id: PBO:0088314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain protein Bdc1","termid":"PBO:0088314"}


id: PBO:0063081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pappalysin 2","termid":"PBO:0063081"}


id: MONDO:0030308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complex autosomal dominant immunologic disorder characterized by recurrent infections with various organisms, as well as noninfectious inflammation manifest as lymphocytic organ infiltration with gastritis, colitis, and lung, liver, CNS, or skin disease. One of the more common features is inflammation of the stomach and bowel. Most patients develop symptoms in infancy or early childhood; the severity is variable. There may be accompanying fever, elevated white blood cell count, decreased B cells, hypogammaglobulinemia, increased C-reactive protein (CRP), and a generalized hyperinflammatory state. Immunologic workup shows variable B- and T-cell abnormalities such as skewed subgroups. Patients have a propensity for the development of lymphoma, usually in adulthood. At the molecular level, the disorder results from a gain-of-function mutation that leads to constitutive and enhanced activation of the intracellular inflammatory signaling pathway.","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 82 with systemic inflammation","secondary_identifiers":["MEDGEN:1781752","UMLS:C5543581","OMIM:619381"],"synonyms":[{"name":"IMD82","type":"exact"},{"name":"immunodeficiency 82 with systemic inflammation","type":"exact"},{"name":"immunodeficiency with systemic inflammation","type":"exact"}],"termid":"MONDO:0030308","xrefs":{"Monarch":{"xref_id":"0030308"}}}


id: MONDO:0000884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myeloid and lymphoid neoplasms associated with FGFR1 abnormalities (obsolete MONDO:0000884)","termid":"MONDO:0000884","xrefs":{"Monarch":{"xref_id":"0000884"}}}


id: GO:0043672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, non-sculptured part of the exine which lies below the sexine.","definition_xrefs":["PMID:5722147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"exine","termid":"GO:0043668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nexine","termid":"GO:0043672"}


id: FYPO:0004297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more than one septum when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"multiseptate cell in stationary phase","termid":"FYPO:0004297"}


id: MONDO:0020203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigmented conjunctival lesion (obsolete MONDO:0020203)","secondary_identifiers":["Orphanet:98615"],"termid":"MONDO:0020203","xrefs":{"Monarch":{"xref_id":"0020203"}}}


id: MONDO:0030528
data:
  {"annotated_genes":["SJAG_04910"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87052],"is_not":false,"summary":null,"term":"MONDO:0030528"}]},"cv_name":"mondo","definition":"An autosomal recessive disorder characterized by onset of recurrent viral and bacterial infections, particularly with encapsulated bacteria, and hypertrophic cardiomyopathy in the first months or years of life. Immunologic workup typically shows decreased circulating B cells and hypo- or agammaglobulinemia, sometimes with neutropenia or T-cell lymphocytosis, although laboratory findings may be variable among patients. Ig replacement therapy is beneficial. Cardiac involvement can also include atrial septal defect, valvular insufficiency, and pre-excitation syndrome. Rare myopathic or neurologic involvement has been reported, but these features are not consistently part of the disorder and may be related to other genetic defects.","definition_xrefs":["OMIM:619705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04910":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 93 and hypertrophic cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1804175","UMLS:C5676899"],"synonyms":[{"name":"IMD93","type":"exact"},{"name":"immunodeficiency and hypertrophic cardiomyopathy","type":"exact"}],"termid":"MONDO:0030528","terms_by_termid":{"MONDO:0030528":null},"xrefs":{"Monarch":{"xref_id":"0030528"}}}


id: PBO:0048429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT8 antisense upstream 1","termid":"PBO:0048429"}


id: GO:0001827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become inner cell mass cells.","definition_xrefs":["ISBN:0124020607","GOC:dph","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"inner cell mass cell differentiation","termid":"GO:0001826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner cell mass cell fate commitment","termid":"GO:0001827"}


id: GO:0006757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into ADP, adenosine diphosphate, to produce ATP.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP generation from ADP (obsolete GO:0006757)","synonyms":[{"name":"ADP phosphorylation","type":"exact"}],"termid":"GO:0006757"}


id: PBO:0088463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sororin, WAPL antagonist Sor1","termid":"PBO:0088463"}


id: MONDO:0004927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired mucocele that develops in the lacrimal sac. It is usually the result of nasolacrimal duct abnormalities or obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic inflammation of lacrimal passage","termid":"MONDO:0004923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dacryocystocele","secondary_identifiers":["ICD9:375.43","MEDGEN:472901","UMLS:C0155241","DOID:9939"],"synonyms":[{"name":"lacrimal mucocele","type":"exact"}],"termid":"MONDO:0004927","xrefs":{"Monarch":{"xref_id":"0004927"}}}


id: PBO:0042538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK6 antisense RNA 1","termid":"PBO:0042538"}


id: SO:1001247
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS whose predicted amino acid sequence is unsupported by any experimental evidence or by any match with any other known sequence.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"orphan","termid":"SO:0000910"},{"relation_name":"is_a","term_name":"CDS_predicted","termid":"SO:1001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orphan_CDS","synonyms":[{"name":"orphan CDS","type":"exact"}],"termid":"SO:1001247"}


id: PBO:0079355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBA1B antisense RNA 1","termid":"PBO:0079355"}


id: MONDO:0007210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brachmann-de Lange-like facial changes with microcephaly, metatarsus adductus, and developmental delay","secondary_identifiers":["OMIM:112370","UMLS:C1862171","MEDGEN:396307","MESH:C566206"],"synonyms":[{"name":"Brachmann-de Lange-like facial changes with microcephaly, metatarsus adductus, and developmental delay","type":"exact"}],"termid":"MONDO:0007210","xrefs":{"Monarch":{"xref_id":"0007210"}}}


id: PBO:0066277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member A, pseudogene","termid":"PBO:0066277"}


id: PBO:0088700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin activating enzyme E1 Uba1","termid":"PBO:0088700"}


id: MONDO:1011503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi syndrome, non-human animal","termid":"MONDO:1011448"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi syndrome, dog","secondary_identifiers":["OMIA:000366-9615"],"termid":"MONDO:1011503","xrefs":{"Monarch":{"xref_id":"1011503"}}}


id: MONDO:0003085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A corneal disease that is characterized by inflammation of the cornea.","definition_xrefs":["NCIT:C26805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratitis","secondary_identifiers":["ICD9:370.9","ICD9:370","EFO:0009449","UMLS:C0022568","ICD10CM:H16","ICD9:370.8","MEDGEN:44013","MESH:D007634","DOID:4677","SCTID:5888003"],"synonyms":[{"name":"cornea inflammation","type":"exact"},{"name":"inflammation of cornea","type":"exact"}],"termid":"MONDO:0003085","xrefs":{"Monarch":{"xref_id":"0003085"}}}


id: PBO:0083038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; F1 translationally regulates ATP6 and ATP8 expression to achieve a balanced output of ATP synthase genes encoded in nucleus and mitochondria; phosphorylated","termid":"PBO:0083038"}


id: PBO:0001205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc5","termid":"PBO:0001205"}


id: PBO:0049309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase pi 1","termid":"PBO:0049309"}


id: GO:0030784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 3'-hydroxy-N-methyl-(S)-coclaurine = S-adenosyl-L-homocysteine + (S)-reticuline.","definition_xrefs":["EC:2.1.1.116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase activity","secondary_identifiers":["RHEA:17789","MetaCyc:2.1.1.116-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase activity","type":"related"}],"termid":"GO:0030784"}


id: GO:1905844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to gamma radiation.","definition_xrefs":["PMID:23505386","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to gamma radiation","termid":"GO:1905843"},{"relation_name":"is_a","term_name":"negative regulation of response to gamma radiation","termid":"GO:2001229"},{"relation_name":"negatively_regulates","term_name":"cellular response to gamma radiation","termid":"GO:0071480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to gamma radiation","synonyms":[{"name":"down regulation of cellular response to gamma radiation","type":"exact"},{"name":"down regulation of cellular response to gamma ray","type":"related"},{"name":"down regulation of cellular response to gamma-ray photon","type":"related"},{"name":"down-regulation of cellular response to gamma radiation","type":"exact"},{"name":"down-regulation of cellular response to gamma ray","type":"related"},{"name":"down-regulation of cellular response to gamma-ray photon","type":"related"},{"name":"downregulation of cellular response to gamma radiation","type":"exact"},{"name":"downregulation of cellular response to gamma ray","type":"related"},{"name":"downregulation of cellular response to gamma-ray photon","type":"related"},{"name":"inhibition of cellular response to gamma radiation","type":"narrow"},{"name":"inhibition of cellular response to gamma ray","type":"related"},{"name":"inhibition of cellular response to gamma-ray photon","type":"related"},{"name":"negative regulation of cellular response to gamma ray","type":"related"},{"name":"negative regulation of cellular response to gamma-ray photon","type":"related"}],"termid":"GO:1905844"}


id: MONDO:0859223
data:
  {"annotated_genes":["SJAG_04127"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86889],"is_not":false,"summary":null,"term":"MONDO:0859223"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04127":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type Iw, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794278","OMIM:619714","UMLS:C5562068"],"termid":"MONDO:0859223","terms_by_termid":{"MONDO:0859223":null},"xrefs":{"Monarch":{"xref_id":"0859223"}}}


id: MONDO:0008584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torus palatinus and torus mandibularis","secondary_identifiers":["UMLS:C1861044","MEDGEN:349942","MESH:C566043","OMIM:189700"],"synonyms":[{"name":"torus palatinus and torus mandibularis","type":"exact"}],"termid":"MONDO:0008584","xrefs":{"Monarch":{"xref_id":"0008584"}}}


id: GO:0140832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + L-histidine(out) + Na+(out) = H+(out) + L-histidine(in) + Na+(in).","definition_xrefs":["PMID:10619430","PMID:11742981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine transmembrane transporter activity","termid":"GO:0005290"},{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"},{"relation_name":"is_a","term_name":"azole:proton antiporter activity","termid":"GO:0045119"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-histidine, sodium:proton antiporter activity","secondary_identifiers":["RHEA:71135"],"termid":"GO:0140832"}


id: GO:0071026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading defective or aberrant RNAs within the cytoplasm.","definition_xrefs":["GOC:krc","PMID:18644474","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA surveillance","termid":"GO:0071025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic RNA surveillance","synonyms":[{"name":"cytoplasmic RNA quality control","type":"exact"},{"name":"cytoplasmic aberrant RNA catabolic process","type":"exact"}],"termid":"GO:0071026"}


id: PBO:0041696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 2","termid":"PBO:0041696"}


id: PBO:0060984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neugrin, neurite outgrowth associated","termid":"PBO:0060984"}


id: GO:1990984
data:
  {"annotated_genes":["SJAG_00892"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102893],"is_not":false,"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from one or more positions within a tRNA molecule.","definition_xrefs":["PMID:27745969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidative RNA demethylase activity","termid":"GO:0035515"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00892":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0003824","GO:0140101","GO:0016491"],"is_obsolete":false,"name":"tRNA demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990984","terms_by_termid":{"GO:1990984":null}}


id: MONDO:0018522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acinar cell carcinoma of pancreas (obsolete MONDO:0018522)","termid":"MONDO:0018522","xrefs":{"Monarch":{"xref_id":"0018522"}}}


id: GO:1905765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protection from non-homologous end joining at telomere.","definition_xrefs":["GOC:nc","PMID:14690602","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere capping","termid":"GO:1904354"},{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance in response to DNA damage","termid":"GO:1904506"},{"relation_name":"is_a","term_name":"regulation of protection from non-homologous end joining at telomere","termid":"GO:1905764"},{"relation_name":"negatively_regulates","term_name":"protection from non-homologous end joining at telomere","termid":"GO:0031848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"negative regulation of protection from non-homologous end joining at telomere","synonyms":[{"name":"down regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"down regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"down-regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"down-regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"downregulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"downregulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"inhibition of protection from NHEJ-mediated telomere fusion","type":"narrow"},{"name":"inhibition of protection from non-homologous end joining at telomere","type":"narrow"},{"name":"negative regulation of protection from NHEJ-mediated telomere fusion","type":"exact"}],"termid":"GO:1905765"}


id: PBO:0003108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37a (predicted)","termid":"PBO:0003108"}


id: MONDO:0004050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma usually arising from the metaphysis of long bones. It is characterized by the presence of a cystic architecture with blood-filled spaces. The prognosis is similar to that of conventional osteosarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"conventional osteosarcoma","termid":"MONDO:0002631"},{"relation_name":"is_a","term_name":"bone osteosarcoma","termid":"MONDO:0002629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"telangiectatic osteogenic sarcoma","secondary_identifiers":["MEDGEN:78059","DOID:6951","ONCOTREE:TEOS","NCIT:C3902","UMLS:C0259782","ICDO:9183/3"],"synonyms":[{"name":"TEOS","type":"related"},{"name":"malignant bone aneurysm","type":"exact"},{"name":"telangiectatic osteosarcoma","type":"exact"},{"name":"telangiectatic osteosarcoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004050","xrefs":{"Monarch":{"xref_id":"0004050"}}}


id: PBO:0058922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7b","termid":"PBO:0058922"}


id: PBO:0086545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR102C is not an essential gene; homozygous diploid deletion strain exhibits high budding index","termid":"PBO:0086545"}


id: internal:is_a
data:
  {"annotation_feature_type":"gene","cv_name":"autocreated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_a","termid":"internal:is_a"}


id: GO:0071405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methanol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to methanol","termid":"GO:0033986"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methanol","termid":"GO:0071405"}


id: PATO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition not to invade surrounding tissues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, non-invasive","termid":"PATO:0002132"}


id: MONDO:0012184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pierson syndrome is characterized by the association of congenital nephrotic syndrome and ocular anomalies with microcoria.","definition_xrefs":["Orphanet:2670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"LAMB2-related infantile-onset nephrotic syndrome","termid":"MONDO:0013621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"Pierson syndrome","secondary_identifiers":["MESH:C537185","DOID:0060852","MEDGEN:373199","NCIT:C128145","UMLS:C1836876","SCTID:723449004","icd11.foundation:555082533","GARD:9420","NANDO:2200117","OMIM:609049"],"synonyms":[{"name":"Pierson syndrome","type":"exact"},{"name":"microcoria - congenital nephrosis","type":"related"},{"name":"microcoria - congenital nephrotic syndrome","type":"related"},{"name":"microcoria-congenital nephrosis syndrome","type":"exact"},{"name":"microcoria-congenital nephrotic syndrome","type":"related"}],"termid":"MONDO:0012184","xrefs":{"Monarch":{"xref_id":"0012184"}}}


id: PBO:0057732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1307","termid":"PBO:0057732"}


id: SO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that has arisen after splitting of the embryo, resulting in the variant being found in only some of the tissues or cells of the body.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatic_variant","synonyms":[{"name":"somatic variant","type":"exact"}],"termid":"SO:0001777"}


id: PBO:0049810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 3","termid":"PBO:0049810"}


id: PBO:0051624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILK associated serine/threonine phosphatase","termid":"PBO:0051624"}


id: PBO:0073132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 4","termid":"PBO:0073132"}


id: PR:Q10178-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q10178-1.","definition_xrefs":["UniProtKB:Q10178","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q10178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component prp10 isoform A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q10178-1"],"synonyms":[{"name":"Spom972h-SF3B1/iso:A","type":"exact"}],"termid":"PR:Q10178-1"}


id: GO:1903217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein processing involved in protein targeting to mitochondrion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:PARL","PMID:21370995","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein processing","termid":"GO:0010955"},{"relation_name":"is_a","term_name":"regulation of protein processing involved in protein targeting to mitochondrion","termid":"GO:1903216"},{"relation_name":"negatively_regulates","term_name":"protein processing involved in protein targeting to mitochondrion","termid":"GO:0006627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"negative regulation of protein processing involved in protein targeting to mitochondrion","synonyms":[{"name":"down regulation of mitochondrial protein processing during import","type":"related"},{"name":"down regulation of protein processing involved in protein targeting to mitochondrion","type":"exact"},{"name":"down-regulation of mitochondrial protein processing during import","type":"related"},{"name":"down-regulation of protein processing involved in protein targeting to mitochondrion","type":"exact"},{"name":"downregulation of mitochondrial protein processing during import","type":"related"},{"name":"downregulation of protein processing involved in protein targeting to mitochondrion","type":"exact"},{"name":"inhibition of mitochondrial protein processing during import","type":"related"},{"name":"inhibition of protein processing involved in protein targeting to mitochondrion","type":"narrow"},{"name":"negative regulation of mitochondrial protein processing during import","type":"related"}],"termid":"GO:1903217"}


id: MONDO:0012505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary pigmented nodular adrenocortical disease in which the cause of the disease is a mutation in the PDE11A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary pigmented nodular adrenocortical disease","termid":"MONDO:0015999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pigmented nodular adrenocortical disease, primary, 2","secondary_identifiers":["GARD:15489","MESH:C566472","OMIM:610475","UMLS:C1864851","DOID:0070547","MEDGEN:355843"],"synonyms":[{"name":"Cushing syndrome, adrenal, due to PPNAD2","type":"related"},{"name":"PDE11A primary pigmented nodular adrenocortical disease","type":"exact"},{"name":"PPNAD2","type":"related"},{"name":"pigmented micronodular adrenocortical disease, primary, 2","type":"related"},{"name":"pigmented nodular adrenocortical disease, primary, 2","type":"exact"},{"name":"pigmented nodular adrenocortical disease, primary, type 2","type":"exact"},{"name":"primary pigmented nodular adrenocortical disease caused by mutation in PDE11A","type":"exact"}],"termid":"MONDO:0012505","xrefs":{"Monarch":{"xref_id":"0012505"}}}


id: MONDO:0012596
data:
  {"annotated_genes":["SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86321],"is_not":false,"summary":null,"term":"MONDO:0012596"}]},"cv_name":"mondo","definition":"Phosphoserine aminotransferase deficiency is an extremely rare form of serine deficiency syndrome characterized clinically in the two reported cases to date by acquired microcephaly, psychomotor retardation, intractable seizures and hypertonia.","definition_xrefs":["Orphanet:284417"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"neurometabolic disorder due to serine deficiency","termid":"MONDO:0018162"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"PSAT deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:718603002","UMLS:C1970253","MEDGEN:410026","MESH:C567032","DOID:0050723","GARD:13273","OMIM:610992"],"synonyms":[{"name":"PSAT deficiency","type":"exact"},{"name":"PSATD","type":"related"},{"name":"phosphoserine aminotransferase deficiency","type":"exact"}],"termid":"MONDO:0012596","terms_by_termid":{"MONDO:0012596":null},"xrefs":{"Monarch":{"xref_id":"0012596"}}}


id: PBO:0049424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 1","termid":"PBO:0049424"}


id: PBO:0060331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IIIA","termid":"PBO:0060331"}


id: GO:0007382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the maxillary segment following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, head","termid":"GO:0007380"},{"relation_name":"part_of","term_name":"posterior head segmentation","termid":"GO:0035289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, maxillary segment","termid":"GO:0007382"}


id: PBO:0011067
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in bacteria","termid":"PBO:0011067"}


id: PBO:0027307
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_rDNA","termid":"PBO:0027307"}


id: PBO:0045614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 25 (pseudogene)","termid":"PBO:0045614"}


id: MONDO:0021249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the lip.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lip disorder","termid":"MONDO:0004748"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lip neoplasm","secondary_identifiers":["ICD10CM:C00-C14","MEDGEN:9777","UMLS:C0023761","SCTID:126770008","NCIT:C3191"],"synonyms":[{"name":"lip neoplasm (disease)","type":"exact"},{"name":"lip neoplasms","type":"exact"},{"name":"lip tumor","type":"exact"},{"name":"lip tumour","type":"exact"},{"name":"neoplasm of Lip","type":"exact"},{"name":"neoplasm of lip","type":"exact"},{"name":"neoplasm of the Lip","type":"exact"},{"name":"tumor of Lip","type":"exact"},{"name":"tumor of lip","type":"exact"},{"name":"tumor of the Lip","type":"exact"},{"name":"tumour of Lip","type":"exact"},{"name":"tumour of lip","type":"exact"},{"name":"tumour of the Lip","type":"exact"}],"termid":"MONDO:0021249","xrefs":{"Monarch":{"xref_id":"0021249"}}}


id: GO:0097495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A trimeric protein complex made up of an H-NS homodimer and an Hha monomer. In Enterobacteriaceae, this complex negatively regulates transcription of a range of genes.","definition_xrefs":["PMID:21600204","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"H-NS-Hha complex","termid":"GO:0097495"}


id: PBO:0025489
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA Like Protein","termid":"PBO:0025489"}


id: GO:0043467
data:
  {"annotated_genes":["SJAG_02785","SJAG_00685","SJAG_00963","SJAG_05006","SJAG_01062","SJAG_02592","SJAG_01376","SJAG_02433","SJAG_05314","SJAG_00698"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78687,76983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[75832,72862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[96371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"},{"annotations":[89479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[111673,97422,94169,109484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903715"},{"annotations":[69868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[75831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and the processes involved in the liberation of energy from these substances.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_00698":null,"SJAG_00963":null,"SJAG_01062":null,"SJAG_01376":null,"SJAG_02433":null,"SJAG_02592":null,"SJAG_02785":null,"SJAG_05006":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of generation of precursor metabolites and energy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-163685"],"termid":"GO:0043467","terms_by_termid":{"GO:0006110":null,"GO:0043456":null,"GO:0045719":null,"GO:0045820":null,"GO:1903715":null,"GO:1905857":null,"GO:2001172":null}}


id: PBO:0061595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotensin receptor 1","termid":"PBO:0061595"}


id: MONDO:0005557
data:
  {"annotated_genes":["SJAG_02805"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010926"}]},"cv_name":"mondo","definition":"Disorders in the processing of calcium in the body: its absorption, transport, storage, and utilization.","definition_xrefs":["MESH:D002128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"calcium metabolic disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:275.40","SCTID:71638002","DOID:10575","ICD9:275.49","MEDGEN:714","ICD9:275.4","UMLS:C0006705","EFO:0005769"],"synonyms":[{"name":"calcium metabolism disease","type":"related"},{"name":"calcium metabolism disorder","type":"related"},{"name":"disorder of calcium metabolism","type":"exact"}],"termid":"MONDO:0005557","terms_by_termid":{"MONDO:0010926":null},"xrefs":{"Monarch":{"xref_id":"0005557"}}}


id: MONDO:0032739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 36","secondary_identifiers":["DOID:0111921","OMIM:618420","MEDGEN:1678385","UMLS:C5193086"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 36","type":"related"},{"name":"SPGF36","type":"related"}],"termid":"MONDO:0032739","xrefs":{"Monarch":{"xref_id":"0032739"}}}


id: MONDO:0020662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade serous epithelial neoplasm arising from the ovary. It is characterized by an atypical proliferation of serous-type epithelial cells without evidence of stromal invasion. It is often asymptomatic but rarely it may present with abdominal pain or abdominal enlargement due to rupture or torsion.","definition_xrefs":["NCIT:C5226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"borderline epithelial tumor of ovary","termid":"MONDO:0016093"},{"relation_name":"is_a","term_name":"ovarian serous tumor","termid":"MONDO:0037255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"borderline ovarian serous tumor","secondary_identifiers":["MEDGEN:231957","EFO:1000139","UMLS:C1332598"],"synonyms":[{"name":"borderline ovarian serous neoplasm","type":"exact"},{"name":"borderline ovarian serous tumor","type":"exact"},{"name":"borderline serous neoplasm of ovary","type":"exact"},{"name":"borderline serous neoplasm of the ovary","type":"exact"},{"name":"borderline serous tumor of ovary","type":"exact"},{"name":"borderline serous tumor of the ovary","type":"exact"},{"name":"borderline serous tumour of ovary","type":"exact"},{"name":"borderline serous tumour of the ovary","type":"exact"},{"name":"ovarian serous neoplasm of low malignant potential","type":"exact"},{"name":"ovarian serous tumor of low malignant potential","type":"exact"},{"name":"ovarian serous tumour of low malignant potential","type":"exact"},{"name":"proliferating ovarian serous neoplasm","type":"exact"},{"name":"proliferating ovarian serous tumor","type":"exact"},{"name":"proliferating ovarian serous tumour","type":"exact"},{"name":"proliferating serous neoplasm of ovary","type":"exact"},{"name":"proliferating serous neoplasm of the ovary","type":"exact"},{"name":"proliferating serous tumor of ovary","type":"exact"},{"name":"proliferating serous tumor of the ovary","type":"exact"},{"name":"proliferating serous tumour of ovary","type":"exact"},{"name":"proliferating serous tumour of the ovary","type":"exact"},{"name":"serous neoplasm of ovary with low malignant potential","type":"exact"},{"name":"serous neoplasm of the ovary with low malignant potential","type":"exact"},{"name":"serous ovarian neoplasm of low malignant potential","type":"exact"},{"name":"serous ovarian tumor of low malignant potential","type":"exact"},{"name":"serous ovarian tumour of low malignant potential","type":"exact"},{"name":"serous tumor of ovary with low malignant potential","type":"exact"},{"name":"serous tumor of the ovary with low malignant potential","type":"exact"},{"name":"serous tumour of ovary with low malignant potential","type":"exact"},{"name":"serous tumour of the ovary with low malignant potential","type":"exact"}],"termid":"MONDO:0020662","xrefs":{"Monarch":{"xref_id":"0020662"}}}


id: MONDO:0021641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the bunyaviridae.","definition_xrefs":["MESH:D002044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bunyaviridae infectious disease","secondary_identifiers":["SCTID:105632002","EFO:0007188"],"synonyms":[{"name":"Bunyaviridae caused disease or disorder","type":"exact"},{"name":"Bunyaviridae disease or disorder","type":"exact"},{"name":"Bunyaviridae infection","type":"related"},{"name":"Bunyaviridae infectious disease","type":"exact"},{"name":"Bunyavirus infection","type":"related"},{"name":"Bunyavirus infections","type":"related"},{"name":"disease caused by Bunyaviridae","type":"related"},{"name":"disease caused by Bunyavirus","type":"related"},{"name":"disease due to Bunyaviridae","type":"exact"},{"name":"disease due to Bunyavirus","type":"related"},{"name":"infections, Bunyaviridae","type":"related"},{"name":"infections, Bunyavirus","type":"related"}],"termid":"MONDO:0021641","xrefs":{"Monarch":{"xref_id":"0021641"}}}


id: SO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 18S rRNA is an RNA component of the small subunit of cytosolic ribosomes in eukaryotes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_18S_gene","termid":"SO:0002236"},{"relation_name":"is_a","term_name":"cytosolic_SSU_rRNA","termid":"SO:0000650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_18S_rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/18S_ribosomal_RNA"],"synonyms":[{"name":"cytosolic 18S rRNA","type":"exact"},{"name":"cytosolic 18S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 18S","type":"exact"}],"termid":"SO:0000407"}


id: PBO:0080638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR86 antisense RNA 1","termid":"PBO:0080638"}


id: MOD:01829
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxymethyl-L-cysteine sulfoxide.","definition_xrefs":["PubMed:18688235","PubMed:17689096"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxymethyl-L-cysteine","termid":"MOD:01061"},{"relation_name":"is_a","term_name":"iodoacetic acid derivatized residue","termid":"MOD:00399"},{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"sulfur monooxygenated residue","termid":"MOD:01854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-carboxymethyl-L-cysteine sulfoxide","synonyms":[{"name":"CmCO","type":"exact"}],"termid":"MOD:01829"}


id: GO:1901705
data:
  {"annotated_genes":["SJAG_04149","SJAG_06635","SJAG_00396","SJAG_00107","SJAG_00830","SJAG_03985","SJAG_04098"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90478,103088,103570,108112,110228,110888,113044],"is_not":false,"summary":null,"term":"GO:1901705"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-isoleucine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"},{"relation_name":"is_a","term_name":"isoleucine biosynthetic process","termid":"GO:0009097"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00396":null,"SJAG_00830":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-isoleucine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-isoleucine anabolism","type":"exact"},{"name":"L-isoleucine biosynthesis","type":"exact"},{"name":"L-isoleucine formation","type":"exact"},{"name":"L-isoleucine synthesis","type":"exact"}],"termid":"GO:1901705","terms_by_termid":{"GO:1901705":null}}


id: FYPO:0004268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of septum disassembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum disassembly","termid":"FYPO:0000132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased septum disassembly","synonyms":[{"name":"decreased septum disassembly during mitotic cell cycle","type":"related"},{"name":"decreased septum disassembly during vegetative growth","type":"exact"},{"name":"reduced septum disassembly","type":"exact"}],"termid":"FYPO:0004268"}


id: MONDO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the vestibulocochlear nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"retrocochlear disease","termid":"MONDO:0002453"},{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibulocochlear nerve disorder","secondary_identifiers":["UMLS:C0001163","SCTID:77949003","MESH:D000160","DOID:12657","ICD9:388.5","NCIT:C27207","MEDGEN:1724"],"synonyms":[{"name":"acoustic nerve disease","type":"exact"},{"name":"acoustic nerve disorder","type":"exact"},{"name":"acoustic nerve disorder NOS","type":"exact"},{"name":"disease of vestibulocochlear nerve","type":"exact"},{"name":"disease or disorder of vestibulocochlear nerve","type":"exact"},{"name":"disorder of acoustic nerve","type":"exact"},{"name":"disorder of acoustovestibular nerve","type":"related"},{"name":"disorder of eighth nerve","type":"related"},{"name":"disorder of the vestibulocochlear nerve","type":"related"},{"name":"disorder of vestibulocochlear nerve","type":"exact"},{"name":"vestibulocochlear nerve disease","type":"exact"},{"name":"vestibulocochlear nerve disease or disorder","type":"exact"},{"name":"vestibulocochlear nerve disorder","type":"exact"}],"termid":"MONDO:0001563","xrefs":{"Monarch":{"xref_id":"0001563"}}}


id: PBO:0068754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 9, pseudogene","termid":"PBO:0068754"}


id: PBO:0051222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-56 (pseudogene)","termid":"PBO:0051222"}


id: GO:0030573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bile acids, any of a group of steroid carboxylic acids occurring in bile.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid metabolic process","termid":"GO:0008206"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"bile acid catabolic process","secondary_identifiers":["GO:0019613"],"synonyms":[{"name":"bile acid 7alpha-dehydroxylation pathway","type":"narrow"},{"name":"bile acid breakdown","type":"exact"},{"name":"bile acid catabolism","type":"exact"},{"name":"bile acid degradation","type":"exact"},{"name":"cholate catabolic process","type":"narrow"}],"termid":"GO:0030573"}


id: MONDO:1012570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cancer that occurs in dogs.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"},{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer, dog","secondary_identifiers":["OMIA:002587-9615"],"termid":"MONDO:1012570","xrefs":{"Monarch":{"xref_id":"1012570"}}}


id: PBO:0067105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 147, pseudogene","termid":"PBO:0067105"}


id: PBO:0109375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 8","termid":"PBO:0109375"}


id: GO:0102325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biphenyl-2,2',3-triol + O2 + NADH + H+ = 2,2',3,3'-tetrahydroxybiphenyl + NAD + H2O.","definition_xrefs":["GOC:pz","RHEA:63516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2,2',3-trihydroxybiphenyl monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-13169"],"termid":"GO:0102325"}


id: PBO:0055323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2751","termid":"PBO:0055323"}


id: PBO:0086323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to hydroxymethylpyrimidine phosphate kinases; member of a gene family with THI20 and THI21; not required for thiamine biosynthesis; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0086323"}


id: MONDO:0018750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete class I glucose-6-phosphate dehydrogenase deficiency (obsolete MONDO:0018750)","termid":"MONDO:0018750","xrefs":{"Monarch":{"xref_id":"0018750"}}}


id: MONDO:0014566
data:
  {"annotated_genes":["SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85237],"is_not":false,"summary":null,"term":"MONDO:0014566"}]},"cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2U (CMT2U) is a subtype of autosonal dominant Charcot-Marie-Tooth disease type 2 characterized by late adult-onset (50-60 years of age) of slowly progressive, axonal, peripheral sensorimotor neuropathy resulting in distal upper limb and proximal and distal lower limb muscle weakness and atrophy, in conjunction with distal, panmodal sensory impairment in upper and lower limbs. Tendon reflexes are reduced and nerve conduction velocities range from reduced to absent. Neuropathic pain has also been associated.","definition_xrefs":["Orphanet:397735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01159":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2U","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110173","MEDGEN:906504","OMIM:616280","SCTID:765046002","UMLS:C4084821","GARD:17638"],"synonyms":[{"name":"CMT2U","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in MARS","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2U","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2U","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy type 2U","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2U","type":"related"},{"name":"MARS Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2 due to MARS mutation","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2U","type":"exact"},{"name":"autosomal dominant axonal Charcot-Marie-Tooth disease type 2U","type":"exact"}],"termid":"MONDO:0014566","terms_by_termid":{"MONDO:0014566":null},"xrefs":{"Monarch":{"xref_id":"0014566"}}}


id: GO:0051509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-glucose + tomatidine = UDP + O-glucosyl-tomatidine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tomatidine UDP-glucosyltransferase activity (obsolete GO:0051509)","termid":"GO:0051509"}


id: MOD:00543
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:11698400","Unimod:187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(hydroxyphenylglyoxal) arginine","synonyms":[{"name":"2HPG","type":"related"},{"name":"bis(hydroxphenylglyoxal) arginine","type":"related"}],"termid":"MOD:00543"}


id: PBO:0113531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane cation-chloride cotransporter (CCC); involved in potassium homeostasis and salt tolerance; localizes to sites of contact between vacuole and mitochondria (vCLAMPs); targeted to vacuole via AP-3 pathway; similar to mammalian electroneutral Na(+)-(K+)-C1- cotransporter family","termid":"PBO:0113531"}


id: GO:0016859
data:
  {"annotated_genes":["SJAG_01714","SJAG_00470","SJAG_01005","SJAG_00078","SJAG_02620","SJAG_03238","SJAG_04155","SJAG_00950","SJAG_00602","SJAG_02413","SJAG_04352","SJAG_03905","SJAG_01246","SJAG_02551","SJAG_03601","SJAG_02308","SJAG_01270"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80066,77707,63589,69830,71631,92563,72421,75138,75750,64660,77793,63715,57675,71531,57903,77725,75494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003755"}]},"cv_name":"molecular_function","definition":"Catalysis of a reaction that interconverts cis and trans isomers. Atoms or groups are termed cis or trans to one another when they lie respectively on the same or on opposite sides of a reference plane identifiable as common among stereoisomers.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00470":null,"SJAG_00602":null,"SJAG_00950":null,"SJAG_01005":null,"SJAG_01246":null,"SJAG_01270":null,"SJAG_01714":null,"SJAG_02308":null,"SJAG_02413":null,"SJAG_02551":null,"SJAG_02620":null,"SJAG_03238":null,"SJAG_03601":null,"SJAG_03905":null,"SJAG_04155":null,"SJAG_04352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"cis-trans isomerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["EC:5.2.-.-"],"termid":"GO:0016859","terms_by_termid":{"GO:0003755":null}}


id: MONDO:0100022
data:
  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id: PBO:0086018
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id: PBO:0044168
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cap binding complex dependent translation initiation factor","termid":"PBO:0044168"}


id: MONDO:0859225
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without variable movement or behavioral abnormalities","secondary_identifiers":["OMIM:619725","MEDGEN:1802087","UMLS:C5676908"],"termid":"MONDO:0859225","xrefs":{"Monarch":{"xref_id":"0859225"}}}


id: PBO:0087607
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cohesin complex; which is required for sister chromatid cohesion during mitosis and meiosis and interacts with centromeres and chromosome arms; relocalizes to the cytosol in response to hypoxia; essential for viability","termid":"PBO:0087607"}


id: PBO:0084061
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) for yeast Rab family member Ypt6p; involved in vesicle mediated protein transport","termid":"PBO:0084061"}


id: PBO:0063025
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 5","termid":"PBO:0063025"}


id: FYECO:0000190
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  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which DAPI was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000190 DAPI added (obsolete FYECO:0000190)","synonyms":[{"name":"4',6-diamidino-2-phenylindole added","type":"exact"}],"termid":"FYECO:0000190"}


id: GO:0038147
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-X-C motif chemokine 12 (CXCL12) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:bf","PMID:22204316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-X-C chemokine receptor activity","termid":"GO:0016494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-X-C motif chemokine 12 receptor activity","synonyms":[{"name":"CXCL12 receptor activity","type":"exact"},{"name":"CXCR4","type":"narrow"},{"name":"CXCR7","type":"narrow"},{"name":"SDF-1 receptor activity","type":"related"},{"name":"stromal cell-derived factor-1 receptor activity","type":"exact"}],"termid":"GO:0038147"}


id: GO:0039688
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA replication process that uses viral RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strands.","definition_xrefs":["VZ:1938","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome replication","termid":"GO:0039693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"viral double stranded DNA replication via reverse transcription","synonyms":[{"name":"RNA-dependent viral DNA replication","type":"related"},{"name":"dsDNA replication via RNA intermediate","type":"exact"},{"name":"viral RNA-dependent DNA replication","type":"exact"}],"termid":"GO:0039688"}


id: PBO:0052612
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB box domain containing 4","termid":"PBO:0052612"}


id: MONDO:0014597
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary immunodeficiency disease in which the cause of the disease is a mutation in the IRF7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 39","secondary_identifiers":["UMLS:C4225358","MEDGEN:904167","SCTID:1269234000","DOID:0111969","OMIM:616345","ICD10CM:D84.8","Orphanet:574918"],"synonyms":[{"name":"IMD39","type":"related"},{"name":"IRF7 primary immunodeficiency disease","type":"exact"},{"name":"immunodeficiency 39","type":"exact"},{"name":"immunodeficiency type 39","type":"exact"},{"name":"predisposition to severe viral infection due to IRF7 deficiency","type":"exact"},{"name":"primary immunodeficiency disease caused by mutation in IRF7","type":"exact"}],"termid":"MONDO:0014597","xrefs":{"Monarch":{"xref_id":"0014597"}}}


id: MOD:01945
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms (2-aminosuccinimidyl)-3-sulfanylpropanoic acid by crosslinking either an aspartic acid residue or an asparagine residue with the following cysteine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-aminosuccinimide ring crosslinked residues","termid":"MOD:01944"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(2-aminosuccinimidyl)-3-sulfanylpropanoic acid","termid":"MOD:01945"}


id: MONDO:0007274
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carpal displacement","secondary_identifiers":["UMLS:C1861847","MEDGEN:348468","OMIM:115400"],"synonyms":[{"name":"carpal bossing","type":"related"},{"name":"carpal displacement","type":"exact"}],"termid":"MONDO:0007274","xrefs":{"Monarch":{"xref_id":"0007274"}}}


id: GO:0071834
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id: PBO:0004634
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  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.13","termid":"PBO:0004634"}


id: MONDO:0006177
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cutaneous undifferentiated pleomorphic sarcoma (obsolete MONDO:0006177)","termid":"MONDO:0006177","xrefs":{"Monarch":{"xref_id":"0006177"}}}


id: GO:0031097
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id: GO:0060595
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id: PBO:0076384
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming acidic coiled-coil containing protein 1 pseudogene 1","termid":"PBO:0076384"}


id: GO:0043553
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylinositol 3-kinase activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylinositol 3-kinase activity (obsolete GO:0043553)","synonyms":[{"name":"down regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"down-regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"downregulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"inhibition of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"negative regulation of PI3K activity","type":"exact"},{"name":"negative regulation of phosphoinositide 3-kinase activity","type":"exact"}],"termid":"GO:0043553"}


id: GO:1904342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of colon smooth muscle contraction.","definition_xrefs":["PMID:24170253","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904305"},{"relation_name":"is_a","term_name":"regulation of colon smooth muscle contraction","termid":"GO:1904341"},{"relation_name":"negatively_regulates","term_name":"colon smooth muscle contraction","termid":"GO:1990765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of colon smooth muscle contraction","synonyms":[{"name":"down regulation of colon smooth muscle contraction","type":"exact"},{"name":"down-regulation of colon smooth muscle contraction","type":"exact"},{"name":"downregulation of colon smooth muscle contraction","type":"exact"},{"name":"inhibition of colon smooth muscle contraction","type":"narrow"}],"termid":"GO:1904342"}


id: MONDO:0018695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of domestic and wild fowl and other birds with influenza A virus. Avian influenza usually does not sicken birds, but can be highly pathogenic and fatal in domestic poultry.","definition_xrefs":["MESH:D005585"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"influenza","termid":"MONDO:0005812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avian influenza","secondary_identifiers":["Orphanet:454836","DOID:4492","GARD:21897","MEDGEN:42091","UMLS:C0016627","SCTID:55604004","EFO:0005222"],"synonyms":[{"name":"avian flu","type":"exact"},{"name":"bird flu","type":"exact"}],"termid":"MONDO:0018695","xrefs":{"Monarch":{"xref_id":"0018695"}}}


id: MONDO:1012246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone dysplasia, non-human animal","termid":"MONDO:1011982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone dysplasia, dog","secondary_identifiers":["OMIA:000881-9615"],"termid":"MONDO:1012246","xrefs":{"Monarch":{"xref_id":"1012246"}}}


id: PR:O74489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A quinone oxidoreductase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04829","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quinone oxidoreductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.16c","secondary_identifiers":["UniProtKB:O74489"],"synonyms":[{"name":"NADPH:quinone reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-qorA","type":"exact"}],"termid":"PR:O74489"}


id: MONDO:1011723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission encephalopathy, non-human animal","secondary_identifiers":["OMIA:002551"],"termid":"MONDO:1011723","xrefs":{"Monarch":{"xref_id":"1011723"}}}


id: PBO:0068058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 363","termid":"PBO:0068058"}


id: GO:0075249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of aeciospore formation, a process in which a dikaryotic spore of typically a rust fungus is produced in an aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"},{"relation_name":"is_a","term_name":"regulation of aeciospore formation","termid":"GO:0075248"},{"relation_name":"positively_regulates","term_name":"aeciospore formation","termid":"GO:0075247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aeciospore formation","termid":"GO:0075249"}


id: MONDO:0017385
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013389"}]},"cv_name":"mondo","definition":"A very rare severe form of epilepsy with poor prognosis that usually begins within a few weeks of birth. The seizure activity can appear in multiple locations in the brain or migrate from one region to another during an episode. It results in severe developmental delay.","definition_xrefs":["NCIT:C125387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal epilepsy syndrome","termid":"MONDO:0020070"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"malignant migrating partial seizures of infancy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:293181","MEDGEN:782160","GARD:12919","UMLS:C3494976","NANDO:1200595"],"synonyms":[{"name":"MMPEI","type":"exact"},{"name":"MMPSI","type":"exact"},{"name":"MPEI","type":"exact"},{"name":"MPSI","type":"broad"},{"name":"malignant migrating Partial seizures in infancy","type":"exact"},{"name":"malignant migrating partial epilepsy of infancy","type":"exact"},{"name":"migrating Partial seizures in infancy","type":"exact"},{"name":"migrating partial epilepsy of infancy","type":"exact"},{"name":"migrating partial seizures of infancy","type":"exact"}],"termid":"MONDO:0017385","terms_by_termid":{"MONDO:0013389":null},"xrefs":{"Monarch":{"xref_id":"0017385"}}}


id: GO:0002071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for a glandular epithelial cell to attain its fully functional state. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell maturation","termid":"GO:0002069"},{"relation_name":"part_of","term_name":"glandular epithelial cell development","termid":"GO:0002068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glandular epithelial cell maturation","termid":"GO:0002071"}


id: PBO:0030201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_mitotic_cell_cycle_arrest_in_interphase","termid":"PBO:0030201"}


id: PBO:0083033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta 1-pyrroline-5-carboxylate reductase; catalyzes the last step in proline biosynthesis","termid":"PBO:0083033"}


id: PBO:0088960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-ribose methyltransferase Trm7","termid":"PBO:0088960"}


id: PBO:0082904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cystathionine beta-synthase; catalyzes synthesis of cystathionine from serine and homocysteine, the first committed step in cysteine biosynthesis; responsible for hydrogen sulfide generation; advances passage through START by promoting cell growth which requires catalytic activity, and reducing critical cell size independent of catalytic activity; mutations in human ortholog CBS cause homocystinuria; human CBS can complement yeast null mutant","termid":"PBO:0082904"}


id: PR:O42666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- but1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uba3-binding protein but1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.12c","synonyms":[{"name":"Spom972h-but1","type":"exact"},{"name":"meiotically up-regulated gene 107 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42666"}


id: GO:0004159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydropyrimidine (5,6-dihydrouracil or 5,6-dihydrothymine) + NAD+ = a pyrimidine (uracil or thymine) + NADH + H+.","definition_xrefs":["PMID:23150645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydropyrimidine dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:DIHYDROURACIL-DEHYDROGENASE-NAD+-RXN","EC:1.3.1.1"],"synonyms":[{"name":"5,6-dihydrouracil:NAD+ oxidoreductase activity","type":"related"},{"name":"dihydrothymine dehydrogenase (NAD+) activity","type":"narrow"},{"name":"dihydrouracil dehydrogenase (NAD+) activity","type":"narrow"},{"name":"pyrimidine reductase activity","type":"related"},{"name":"thymine reductase activity","type":"narrow"},{"name":"uracil reductase activity","type":"narrow"}],"termid":"GO:0004159"}


id: GO:0042333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of an oxidizable substrate, for example, fructose.","definition_xrefs":["PMID:11029423","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to oxidizable substrate","synonyms":[{"name":"taxis in response to oxidizable substrate","type":"exact"}],"termid":"GO:0042333"}


id: FYECO:0000355
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which R-limonene was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ R-limonene","synonyms":[{"name":"+ (4R)-limonene","type":"exact"}],"termid":"FYECO:0000355"}


id: MONDO:0015744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 19q is a rare chromosomal anomaly syndrome characterized by low birth weight, developmental delay, intellectual disability, short stature, craniofacial dysmorphism (incl. microcephaly, midface hypoplasia, hypertelorism, flat nasal bridge, ear anomalies, short philtrum, downturned corners of the mouth, micrognathia) and a short neck with redundant skin folds. Additional features may include hypotonia, skeletal anomalies (e.g. clino/camptodactyly), seizures and congenital cardiac, urogenital and gastrointestinal malformations.","definition_xrefs":["Orphanet:1717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 19","termid":"MONDO:0016969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 19q","secondary_identifiers":["MEDGEN:1646863","SCTID:766052008","UMLS:C4707664","GARD:18743"],"synonyms":[{"name":"distal duplication 19q","type":"exact"},{"name":"distal trisomy type 19q","type":"exact"},{"name":"telomeric duplication 19q","type":"exact"},{"name":"trisomy 19qter","type":"exact"}],"termid":"MONDO:0015744","xrefs":{"Monarch":{"xref_id":"0015744"}}}


id: MONDO:0012446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"seborrhea-like dermatitis with psoriasiform elements","secondary_identifiers":["MESH:C565217","MEDGEN:342832","OMIM:610227","GARD:17039","Orphanet:168606","UMLS:C1853258"],"synonyms":[{"name":"seborrhea-like dermatitis with psoriasiform elements","type":"exact"}],"termid":"MONDO:0012446","xrefs":{"Monarch":{"xref_id":"0012446"}}}


id: PBO:0051910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha V","termid":"PBO:0051910"}


id: GO:0071829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a plasma lipoprotein particle into its constituent components.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex disassembly","termid":"GO:0032987"},{"relation_name":"is_a","term_name":"plasma lipoprotein particle organization","termid":"GO:0071827"},{"relation_name":"part_of","term_name":"regulation of plasma lipoprotein particle levels","termid":"GO:0097006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma lipoprotein particle disassembly","termid":"GO:0071829"}


id: PBO:0077255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 6","termid":"PBO:0077255"}


id: GO:0033638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the response of its host to heat acclimation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:35350854","GOC:pamgo_curators","PMID:17425405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host response to abiotic stimulus","termid":"GO:0033635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host heat acclimation","synonyms":[{"name":"modulation by symbiont of host heat acclimation","type":"exact"},{"name":"modulation by symbiont of host response to heat","type":"related"},{"name":"response to heat shock","type":"related"}],"termid":"GO:0033638"}


id: PBO:0046563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 5","termid":"PBO:0046563"}


id: PBO:0015227
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(2), RING domain-dependent","termid":"PBO:0015227"}


id: PBO:0087912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor involved in iron utilization and homeostasis; binds consensus site PyPuCACCCPu and activates transcription in response to changes in iron availability; in iron-replete conditions localization is regulated by Grx3p, Grx4p, and Fra2p, and promoter binding is negatively regulated via Grx3p-Grx4p binding; AFT1 has a paralog, AFT2, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087912"}


id: PBO:0084248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in GTP biosynthesis, expression is induced by mycophenolic acid resulting in resistance to the drug, expression is repressed by nutrient limitation; IMD2 has a paralog, YAR073W/YAR075W, that arose from a segmental duplication","termid":"PBO:0084248"}


id: GO:1900414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of cytokinesis.","definition_xrefs":["GOC:TermGenie","GOC:mah","PMID:15509866"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytokinesis by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900414)","termid":"GO:1900414"}


id: PR:Q9P7L8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap62 gene.","definition_xrefs":["UniProtKB:Q9P7L8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap62 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.05","synonyms":[{"name":"Spom972h-sap62","type":"exact"},{"name":"spliceosome-associated protein 62 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7L8"}


id: GO:0007560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from an imaginal disc are generated and organized. The imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult appendages (legs, antennae, wings, etc.) during metamorphosis from larval to adult form.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"imaginal disc development","termid":"GO:0007444"},{"relation_name":"part_of","term_name":"metamorphosis","termid":"GO:0007552"},{"relation_name":"part_of","term_name":"instar larval or pupal morphogenesis","termid":"GO:0048707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc morphogenesis","secondary_identifiers":["GO:0007452"],"synonyms":[{"name":"imaginal disc metamorphosis","type":"exact"}],"termid":"GO:0007560"}


id: GO:0071607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage inflammatory protein-1 gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"macrophage inflammatory protein-1 gamma production","synonyms":[{"name":"CCL9 production","type":"exact"},{"name":"MIP-1g production","type":"exact"},{"name":"chemokine (C-C motif) ligand 9 production","type":"exact"}],"termid":"GO:0071607"}


id: PBO:0047324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAU pseudogene 2","termid":"PBO:0047324"}


id: PBO:0064133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2","termid":"PBO:0064133"}


id: GO:0141166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that chemically modifies 5-methylcytosine (5meC) to make it a substrate for the base excision repair pathway, which then restores the unmodified cytosine.","definition_xrefs":["PMID:21862972","PMID:36478523","PMID:31546611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"chromosomal 5-methylcytosine DNA demethylation pathway","synonyms":[{"name":"epigenetic 5-methylcytosine DNA demethylation","type":"related"},{"name":"epigenetic 5-methylcytosine DNA demethylation pathway","type":"related"},{"name":"epigenetic DNA demethylation","type":"related"}],"termid":"GO:0141166"}


id: GO:0070337
data:
  {"annotated_genes":["SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99168],"is_not":false,"summary":null,"term":"GO:0070337"}]},"cv_name":"molecular_function","definition":"Binding to a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.","definition_xrefs":["PMID:15189154","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flap-structured DNA binding","termid":"GO:0070336"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"3'-flap-structured DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070337","terms_by_termid":{"GO:0070337":null}}


id: PBO:0043794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin like and PC-esterase domain containing 1","termid":"PBO:0043794"}


id: PBO:0054606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2011","termid":"PBO:0054606"}


id: PBO:0006206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-chemical,_gene_product,_or_complex","termid":"PBO:0006206"}


id: PBO:0088064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-ribosomal 60S subunit protein L40A fusion protein; cleaved to yield ubiquitin and ribosomal protein L40A; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40A has a paralog, RPL40B, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0088064"}


id: PBO:0052762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 54","termid":"PBO:0052762"}


id: PBO:0026769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_surface","termid":"PBO:0026769"}


id: MONDO:0009287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogenosis due to glucose-6-phosphatase deficiency (G6P) type a, or glycogen storage disease (GSD) type 1a, is a type of glycogenosis due to G6P deficiency.","definition_xrefs":["Orphanet:79258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease I","termid":"MONDO:0002413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease due to glucose-6-phosphatase deficiency type IA","secondary_identifiers":["NANDO:2201153","DOID:2749","SCTID:444707001","OMIM:232200","UMLS:C2919796","GARD:7864","MEDGEN:415885","MESH:C538655"],"synonyms":[{"name":"G6P deficiency type 1a","type":"exact"},{"name":"G6PC glycogen storage disease","type":"exact"},{"name":"GSD Ia","type":"related"},{"name":"GSD due to G6P deficiency type 1a","type":"exact"},{"name":"GSD due to G6P deficiency type Ia","type":"exact"},{"name":"GSD type 1a","type":"exact"},{"name":"GSD1","type":"related"},{"name":"GSD1A","type":"related"},{"name":"GSDIa","type":"exact"},{"name":"Von Gierke disease","type":"related"},{"name":"glucose-6-phosphatase deficiency","type":"related"},{"name":"glucose-6-phosphatase deficiency glycogen storage disease","type":"related"},{"name":"glycogen storage disease 1","type":"related"},{"name":"glycogen storage disease 1A","type":"related"},{"name":"glycogen storage disease Ia","type":"related"},{"name":"glycogen storage disease caused by mutation in G6PC","type":"exact"},{"name":"glycogen storage disease due to G6P deficiency type Ia","type":"exact"},{"name":"glycogen storage disease type 1a","type":"exact"},{"name":"glycogen storage disease type Ia","type":"exact"},{"name":"glycogenosis due to glucose-6-phosphatase deficiency type 1a","type":"exact"},{"name":"glycogenosis due to glucose-6-phosphatase deficiency type Ia","type":"exact"},{"name":"glycogenosis type Ia","type":"exact"},{"name":"hepatorenal form of glycogen storage disease","type":"related"},{"name":"hepatorenal glycogenosis","type":"related"}],"termid":"MONDO:0009287","xrefs":{"Monarch":{"xref_id":"0009287"}}}


id: GO:0046648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gamma-delta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"is_a","term_name":"positive regulation of gamma-delta T cell activation","termid":"GO:0046645"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell proliferation","termid":"GO:0046646"},{"relation_name":"positively_regulates","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of gamma-delta T cell proliferation","synonyms":[{"name":"activation of gamma-delta T cell proliferation","type":"narrow"},{"name":"positive regulation of gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of gamma-delta T-cell proliferation","type":"exact"},{"name":"positive regulation of gamma-delta T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of gamma-delta T cell proliferation","type":"narrow"},{"name":"up regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"up-regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"upregulation of gamma-delta T cell proliferation","type":"exact"}],"termid":"GO:0046648"}


id: PBO:0053852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1121","termid":"PBO:0053852"}


id: MONDO:0958328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Seckel syndrome","termid":"MONDO:0019342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Seckel syndrome 11","secondary_identifiers":["UMLS:C5935595","OMIM:620767","MEDGEN:1855399"],"termid":"MONDO:0958328","xrefs":{"Monarch":{"xref_id":"0958328"}}}


id: FYPO:0006870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone methylation is abnormal. All histone methylation may be affected, or methylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification","termid":"FYPO:0006458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"abnormal histone methylation","termid":"FYPO:0006870"}


id: PBO:0050496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B6","termid":"PBO:0050496"}


id: MONDO:0017433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with combined reduction defects of upper and lower limbs (obsolete MONDO:0017433)","secondary_identifiers":["Orphanet:294957","icd11.foundation:1211657447"],"termid":"MONDO:0017433","xrefs":{"Monarch":{"xref_id":"0017433"}}}


id: GO:0015449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type IV protein (DNA-protein) secretor activity (obsolete GO:0015449)","synonyms":[{"name":"type IV protein (DNA-protein) secretor activity","type":"exact"}],"termid":"GO:0015449"}


id: GO:0150158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-34 production.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-34 production","termid":"GO:0150157"},{"relation_name":"positively_regulates","term_name":"interleukin-34 production","termid":"GO:0150155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-34 production","secondary_identifiers":["GO:0150161"],"synonyms":[{"name":"positive regulation of interleukin-34 biosynthetic process","type":"narrow"}],"termid":"GO:0150158"}


id: PBO:0088853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane TRP-like calcium ion channel Trp1322","termid":"PBO:0088853"}


id: GO:0150047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"G protein-coupled neurotransmitter receptor activity, occurring in the presynaptic membrane, involved in regulation of presynaptic membrane potential.","definition_xrefs":["PMID:11498050","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential","type":"exact"}],"termid":"GO:0150047"}


id: PBO:0075867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 7","termid":"PBO:0075867"}


id: GO:0001671
data:
  {"annotated_genes":["SJAG_00901","SJAG_01708","SJAG_02045","SJAG_03221","SJAG_00066","SJAG_00796","SJAG_01597","SJAG_01121"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57254,66856,74046,78892,91185,96037,107464,110100],"is_not":false,"summary":null,"term":"GO:0001671"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an ATP hydrolysis activity.","definition_xrefs":["GOC:ajp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase regulator activity","termid":"GO:0060590"},{"relation_name":"is_a","term_name":"molecular function activator activity","termid":"GO:0140677"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00066":null,"SJAG_00796":null,"SJAG_00901":null,"SJAG_01121":null,"SJAG_01597":null,"SJAG_01708":null,"SJAG_02045":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"ATPase activator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5251955","Reactome:R-HSA-5251959"],"synonyms":[{"name":"ATPase stimulator activity","type":"exact"}],"termid":"GO:0001671","terms_by_termid":{"GO:0001671":null}}


id: GO:0097013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a phagocytic vesicle.","definition_xrefs":["GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle lumen","termid":"GO:0071682"},{"relation_name":"part_of","term_name":"phagocytic vesicle","termid":"GO:0045335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"phagocytic vesicle lumen","termid":"GO:0097013"}


id: MONDO:0033371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 62","secondary_identifiers":["GARD:16271","MEDGEN:1631233","OMIM:617938","DOID:0080420","UMLS:C4693699"],"synonyms":[{"name":"DEE62","type":"exact"},{"name":"EIEE62","type":"exact"},{"name":"developmental and epileptic encephalopathy 62","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 62","type":"exact"}],"termid":"MONDO:0033371","xrefs":{"Monarch":{"xref_id":"0033371"}}}


id: PBO:0042592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 5","termid":"PBO:0042592"}


id: MONDO:0004909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral gland abscess","secondary_identifiers":["SCTID:444820005","UMLS:C2919928","MEDGEN:754230","DOID:9877","icd11.foundation:2030970195","ICD9:597.0"],"termid":"MONDO:0004909","xrefs":{"Monarch":{"xref_id":"0004909"}}}


id: GO:1903474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that maintains the mitotic actinomyosin contractile ring at the plasma membrane.","definition_xrefs":["GO_REF:0000060","GOC:vw","PMID:19139265","PMID:28784611","GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete anchoring of the mitotic actomyosin contractile ring to the plasma membrane (obsolete GO:1903474)","synonyms":[{"name":"cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903474"}


id: PBO:0065771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QKI interacting lncRNA","termid":"PBO:0065771"}


id: PBO:0027444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_VLP_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0027444"}


id: GO:0046924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to an L-phenylalanine residue to form 2-(S-L-cysteinyl)-L-phenylalanine.","definition_xrefs":["RESID:AA0340","PMID:12696888"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-(S-L-cysteinyl)-L-phenylalanine (obsolete GO:0046924)","termid":"GO:0046924"}


id: PR:Q9URX8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup155 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin C890.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.06","secondary_identifiers":["UniProtKB:Q9URX8"],"synonyms":[{"name":"Spom972h-NUP155","type":"exact"}],"termid":"PR:Q9URX8"}


id: GO:0010034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetate stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acetate","termid":"GO:0010034"}


id: FYPO:0003328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule organization phenotype observed in the vegetative growth phase of the life cycle in which the orientation of cytoplasmic microtubules within a cell is abnormal during interphase of the mitotic cell cycle. The normal orientation is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"misoriented interphase microtubules","synonyms":[{"name":"misoriented cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"misoriented interphase cytoplasmic microtubules","type":"exact"},{"name":"misoriented interphase microtubules during mitotic cell cycle","type":"related"},{"name":"misoriented interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0003328"}


id: PBO:0072773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAA2-SAA4 readthrough","termid":"PBO:0072773"}


id: PBO:0000437
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forms a polar gradient","termid":"PBO:0000437"}


id: GO:0051000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monooxygenase activity","termid":"GO:0032770"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase activity","termid":"GO:0050999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric-oxide synthase activity","synonyms":[{"name":"NOS activator","type":"exact"},{"name":"activation of nitric-oxide synthase activity","type":"narrow"},{"name":"nitric-oxide synthase activator","type":"exact"},{"name":"positive regulation of NOS activity","type":"exact"},{"name":"stimulation of nitric-oxide synthase activity","type":"narrow"},{"name":"up regulation of nitric-oxide synthase activity","type":"exact"},{"name":"up-regulation of nitric-oxide synthase activity","type":"exact"},{"name":"upregulation of nitric-oxide synthase activity","type":"exact"}],"termid":"GO:0051000"}


id: GO:0071896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained at the adherens junction.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:26412237","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to adherens junction","secondary_identifiers":["GO:1904696"],"synonyms":[{"name":"protein localisation in adherens junction","type":"exact"},{"name":"protein localisation in cell-cell adherens junction","type":"exact"},{"name":"protein localisation to adherens junction","type":"exact"},{"name":"protein localisation to cell-cell adherens junction","type":"exact"},{"name":"protein localization in adherens junction","type":"exact"},{"name":"protein localization in cell-cell adherens junction","type":"exact"},{"name":"protein localization to cell-cell adherens junction","type":"exact"}],"termid":"GO:0071896"}


id: PBO:0065082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primase and DNA directed polymerase","termid":"PBO:0065082"}


id: GO:0033089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell differentiation in the thymus.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation in thymus","termid":"GO:0033081"},{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"positively_regulates","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T cell differentiation in thymus","synonyms":[{"name":"positive regulation of T cell development in thymus","type":"related"},{"name":"positive regulation of thymic T cell differentiation","type":"exact"},{"name":"positive regulation of thymocyte cell differentiation","type":"exact"},{"name":"positive regulation of thymocyte differentiation","type":"exact"}],"termid":"GO:0033089"}


id: PBO:0013047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase involved in sporulation Dbl4","termid":"PBO:0013047"}


id: GO:0008309
data:
  {"annotated_genes":["SJAG_01648","SJAG_02298","SJAG_05373","SJAG_01832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72939,88339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[96925,107554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of a double-stranded DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01648":null,"SJAG_01832":null,"SJAG_02298":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674","GO:0004527","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"double-stranded DNA exodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"double-stranded DNA specific exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0008309","terms_by_termid":{"GO:0008311":null,"GO:0051908":null}}


id: MONDO:0859371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhabdomyolysis, susceptibility to, 1","secondary_identifiers":["OMIM:620235","UMLS:C5774307","MEDGEN:1824080"],"termid":"MONDO:0859371","xrefs":{"Monarch":{"xref_id":"0859371"}}}


id: GO:0075011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of germ tube formation on or near host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of germ tube formation","termid":"GO:0075010"},{"relation_name":"positively_regulates","term_name":"germ tube formation","termid":"GO:0075009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of germ tube formation","synonyms":[{"name":"positive regulation of germ tube formation on or near host","type":"exact"}],"termid":"GO:0075011"}


id: GO:0035218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the leg imaginal disc over time, from its initial formation through to its metamorphosis to form adult structures including the leg, coxa and ventral thoracic pleura.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leg disc development","termid":"GO:0035218"}


id: GO:0006530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of asparagine, 2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"asparagine catabolic process","synonyms":[{"name":"asparagine breakdown","type":"exact"},{"name":"asparagine catabolism","type":"exact"},{"name":"asparagine degradation","type":"exact"}],"termid":"GO:0006530"}


id: MONDO:0012787
data:
  {"annotated_genes":["SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86110],"is_not":false,"summary":null,"term":"MONDO:0012787"}]},"cv_name":"mondo","definition":"This syndrome is characterized by progressive spastic paraplegia and distal muscle wasting.","definition_xrefs":["Orphanet:139480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 39","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2677586","GARD:4924","OMIM:612020","MEDGEN:383142","DOID:0110790","MESH:C567433","SCTID:719103009"],"synonyms":[{"name":"NTE related motor neuron disorder","type":"related"},{"name":"NTE-related motor neuron disorder","type":"exact"},{"name":"NTEMND","type":"exact"},{"name":"PNPLA6 hereditary spastic paraplegia","type":"exact"},{"name":"SPG39","type":"exact"},{"name":"autosomal recessive spastic paraplegia 39","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 39","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in PNPLA6","type":"exact"},{"name":"hereditary spastic paraplegia type 39","type":"exact"},{"name":"spastic paraplegia 39","type":"related"},{"name":"spastic paraplegia 39, autosomal recessive","type":"related"},{"name":"spastic paraplegia due to NTE mutation","type":"exact"},{"name":"spastic paraplegia due to neuropathy target esterase mutation","type":"exact"}],"termid":"MONDO:0012787","terms_by_termid":{"MONDO:0012787":null},"xrefs":{"Monarch":{"xref_id":"0012787"}}}


id: PBO:0068145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 452","termid":"PBO:0068145"}


id: GO:0000395
data:
  {"annotated_genes":["SJAG_01301","SJAG_03983","SJAG_01015","SJAG_02279","SJAG_04214","SJAG_04911","SJAG_02304","SJAG_03469","SJAG_04163","SJAG_01440","SJAG_01870","SJAG_00058","SJAG_00147","SJAG_02843","SJAG_01654","SJAG_05009"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79347,91360,93797,94721,94974,95395,97633,102344,102506,105680,109863,110422,110436,112160,113068,115039],"is_not":false,"summary":null,"term":"GO:0000395"}]},"cv_name":"biological_process","definition":"Recognition of the intron 5'-splice site by components of the assembling spliceosome.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splice site recognition","termid":"GO:0006376"},{"relation_name":"part_of","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_01015":null,"SJAG_01301":null,"SJAG_01440":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02843":null,"SJAG_03469":null,"SJAG_03983":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"mRNA 5'-splice site recognition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000369","GO:0000368"],"synonyms":[{"name":"U12-type nuclear mRNA 5' splice site recognition","type":"narrow"},{"name":"U12-type nuclear mRNA 5'-splice site recognition","type":"narrow"},{"name":"U2-type nuclear mRNA 5' splice site recognition","type":"narrow"},{"name":"U2-type nuclear mRNA 5'-splice site recognition","type":"narrow"},{"name":"nuclear mRNA 5' splice site recognition","type":"exact"},{"name":"nuclear mRNA 5'-splice site recognition","type":"exact"},{"name":"spliceosomal CC complex biosynthesis","type":"narrow"},{"name":"spliceosomal CC complex formation","type":"narrow"},{"name":"spliceosomal E complex biosynthesis","type":"narrow"},{"name":"spliceosomal E complex formation","type":"narrow"},{"name":"spliceosomal commitment complex biosynthesis","type":"narrow"},{"name":"spliceosomal commitment complex formation","type":"narrow"}],"termid":"GO:0000395","terms_by_termid":{"GO:0000395":null}}


id: PBO:0065616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A2 pseudogene 2","termid":"PBO:0065616"}


id: GO:0140877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mevastatin , also known as compactin or ML-236B, and which acts as a potent competitive inhibitor of HMG-CoA reductase.","definition_xrefs":["PMID:12172803","PMID:12242508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"mevastatin biosynthetic process","synonyms":[{"name":"mevastatin anabolism","type":"exact"},{"name":"mevastatin biosynthesis","type":"exact"},{"name":"mevastatin formation","type":"exact"},{"name":"mevastatin synthesis","type":"exact"}],"termid":"GO:0140877"}


id: PBO:0087841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonine deaminase, catalyzes first step in isoleucine biosynthesis; expression is under general amino acid control; ILV1 locus exhibits highly positioned nucleosomes whose organization is independent of known ILV1 regulation","termid":"PBO:0087841"}


id: PR:P78966
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mam1 gene.","definition_xrefs":["UniProtKB:P78966","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating factor M secretion protein mam1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.02c","synonyms":[{"name":"P-glycoprotein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mam1","type":"exact"},{"name":"multiple drug resistance protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78966"}


id: GO:0072122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of extraglomerular glomerular mesangium cells by cell division, resulting in the expansion of their population. Extraglomerular mesangial cells (also known as lacis cells, Goormaghtigh cells) are light-staining cells in the kidney found outside the glomerulus, near the vascular pole and macula densa.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extraglomerular mesangial cell proliferation","synonyms":[{"name":"Goormaghtigh proliferation","type":"related"},{"name":"lacis cell proliferation","type":"related"}],"termid":"GO:0072122"}


id: MONDO:0016857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blepharophimosis - epicanthus inversus - ptosis (BPES) due to 3q23 microdeletion is a form of BPES, which in addition to the classical eyelids features of BPES, present genitourinary anomalies, spastic diplegia and speech delay.","definition_xrefs":["Orphanet:261559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blepharophimosis, ptosis, and epicanthus inversus syndrome","termid":"MONDO:0007201"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 3","termid":"MONDO:0016902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005047","MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"blepharophimosis-epicanthus inversus-ptosis due to 3q23 rearrangement syndrome","termid":"MONDO:0016857","xrefs":{"Monarch":{"xref_id":"0016857"}}}


id: GO:0045158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of electrons within the cytochrome b6/f complex of photosystem II.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity","synonyms":[{"name":"cytochrome","type":"related"},{"name":"cytochrome b/b6","type":"related"},{"name":"cytochrome b6","type":"narrow"},{"name":"cytochrome f","type":"narrow"}],"termid":"GO:0045158"}


id: MONDO:1012581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucopolysaccharidosis or mucopolysaccharidosis-like disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581","xrefs":{"Monarch":{"xref_id":"1012581"}}}


id: MONDO:0015173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune enteropathy type 2 (obsolete MONDO:0015173)","secondary_identifiers":["Orphanet:103916"],"termid":"MONDO:0015173","xrefs":{"Monarch":{"xref_id":"0015173"}}}


id: MONDO:0036870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm arising from the lymphatic vessels.","definition_xrefs":["NCIT:C3723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"},{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic vessel neoplasm","secondary_identifiers":["MEDGEN:64616","UMLS:C0206619"],"synonyms":[{"name":"lymph vessel neoplasm","type":"exact"},{"name":"lymph vessel tumor","type":"exact"},{"name":"lymph vessel tumour","type":"exact"},{"name":"lymphatic vessel neoplasm","type":"exact"},{"name":"lymphatic vessel tumor","type":"exact"},{"name":"lymphatic vessel tumour","type":"exact"},{"name":"neoplasm of lymph vessel","type":"exact"},{"name":"neoplasm of lymphatic vessel","type":"exact"},{"name":"neoplasm of the lymph vessel","type":"exact"},{"name":"neoplasm of the lymphatic vessel","type":"exact"},{"name":"tumor of lymph vessel","type":"exact"},{"name":"tumor of lymphatic vessel","type":"exact"},{"name":"tumor of the lymph vessel","type":"exact"},{"name":"tumor of the lymphatic vessel","type":"exact"},{"name":"tumour of lymph vessel","type":"exact"},{"name":"tumour of lymphatic vessel","type":"exact"},{"name":"tumour of the lymph vessel","type":"exact"},{"name":"tumour of the lymphatic vessel","type":"exact"}],"termid":"MONDO:0036870","xrefs":{"Monarch":{"xref_id":"0036870"}}}


id: GO:0140894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to an endolysosomal pattern recognition receptor (PRR) of the toll-like family. PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["PMID:29679565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endolysosomal toll-like receptor signaling pathway","synonyms":[{"name":"endolysosomal pattern recognition receptor signaling pathway","type":"exact"}],"termid":"GO:0140894"}


id: PBO:0069435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 700, pseudogene","termid":"PBO:0069435"}


id: PATO:0000466
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000466 none (obsolete PATO:0000466)","termid":"PATO:0000466"}


id: PBO:0075533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E13","termid":"PBO:0075533"}


id: PBO:0082099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8-oxo-dGTP diphosphatase; prevents spontaneous mutagenesis via sanitization of oxidized purine nucleoside triphosphates; can also act as peroxisomal pyrophosphatase with specificity for coenzyme A and CoA derivatives, may function to remove potentially toxic oxidized CoA disulfide from peroxisomes to maintain the capacity for beta-oxidation of fatty acids; nudix hydrolase family member; similar E. coli MutT and human, rat and mouse MTH1","termid":"PBO:0082099"}


id: PBO:0005571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dihydrouridine synthase Dus4 (predicted)","termid":"PBO:0005571"}


id: MONDO:0010368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency without anhidrotic ectodermal dysplasia (obsolete MONDO:0010368)","termid":"MONDO:0010368","xrefs":{"Monarch":{"xref_id":"0010368"}}}


id: MONDO:0009343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease with ulnar polydactyly, polysyndactyly of big toes, and ventricular septal defect","secondary_identifiers":["OMIM:235750","UMLS:C1856111","MEDGEN:341065","MESH:C538120","MESH:C565517"],"synonyms":[{"name":"Hirschsprung disease polydactyly heart disease","type":"related"},{"name":"Hirschsprung disease with ulnar polydactyly, polysyndactyly of big toes, and ventricular septal defect","type":"exact"}],"termid":"MONDO:0009343","xrefs":{"Monarch":{"xref_id":"0009343"}}}


id: SO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene cassette array containing H+ mating type specific information.","definition_xrefs":["PMID:18354497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silent_mating_type_cassette_array","termid":"SO:0001984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mat2P","termid":"SO:0002157"}


id: MONDO:0005522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the small intestine","direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine cancer","termid":"MONDO:0000956"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"small intestine carcinoma","secondary_identifiers":["UMLS:C0238196","icd11.foundation:1484520499","EFO:0005588","ONCOTREE:SIC","MEDGEN:65952","DOID:4907","NCIT:C7724","SCTID:448664009"],"synonyms":[{"name":"cancer of small bowel","type":"broad"},{"name":"cancer of the small bowel","type":"broad"},{"name":"carcinoma of small bowel","type":"exact"},{"name":"carcinoma of small intestine","type":"exact"},{"name":"carcinoma of the small bowel","type":"exact"},{"name":"carcinoma of the small intestine","type":"exact"},{"name":"small bowel cancer","type":"broad"},{"name":"small bowel carcinoma","type":"exact"},{"name":"small intestinal cancer","type":"broad"},{"name":"small intestinal carcinoma","type":"exact"},{"name":"small intestine cancer","type":"broad"},{"name":"small intestine cancer, NOS","type":"exact"},{"name":"small intestine carcinoma","type":"exact"}],"termid":"MONDO:0005522","xrefs":{"Monarch":{"xref_id":"0005522"}}}


id: PBO:0116778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2I antisense RNA 1","termid":"PBO:0116778"}


id: PBO:0039833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 1","termid":"PBO:0039833"}


id: PBO:0090987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg2","termid":"PBO:0090987"}


id: SO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Dictyostelium intermediate repeat sequence (DIRS) retrotransposons are members of the YR_retrotransposon (SO:0002286) superfamily with the following protein domains: RT, RH, YR, and MT. RT is a reverse transcriptase. RH is RNAse H. YR is tyrosine recombinase. MT is DNA N-6-adenine-methyltransferase.","definition_xrefs":["PMID:24086727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"YR_retrotransposon","termid":"SO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRS_YR_retrotransposon","synonyms":[{"name":"DIRS YR retrotransposon","type":"exact"},{"name":"DIRS retrotransposon","type":"exact"},{"name":"RYD retrotransposon","type":"exact"}],"termid":"SO:0002287"}


id: PBO:0058178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4472-2","termid":"PBO:0058178"}


id: PBO:0075157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 13","termid":"PBO:0075157"}


id: MOD:00541
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 9x(13)C labeled L-phosphotyrosine.","definition_xrefs":["PubMed:12716131","Unimod:185"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O4'-phospho-L-tyrosine","termid":"MOD:00048"},{"relation_name":"is_a","term_name":"9x(13)C labeled residue","termid":"MOD:00540"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9x(13)C labeled L-phosphotyrosine","synonyms":[{"name":"C13 label (Phosphotyrosine)","type":"related"},{"name":"Label:13C(9)+Phospho","type":"related"}],"termid":"MOD:00541"}


id: MONDO:0003153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain stem glioma that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain stem glioma","termid":"MONDO:0002911"},{"relation_name":"is_a","term_name":"adult brain stem neoplasm","termid":"MONDO:0024797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult brainstem glioma","secondary_identifiers":["UMLS:C0278873","NCIT:C9091","DOID:4813","MEDGEN:124526"],"synonyms":[{"name":"adult brain stem glioma","type":"exact"},{"name":"adult brainstem glioma","type":"exact"},{"name":"adult brainstem neuroglial neoplasm","type":"exact"},{"name":"adult brainstem neuroglial tumor","type":"exact"},{"name":"adult brainstem neuroglial tumour","type":"exact"},{"name":"brain stem glioma","type":"broad"},{"name":"brain stem glioma of adults","type":"exact"},{"name":"glioma of adult brain stem","type":"exact"},{"name":"glioma of the adult brain stem","type":"exact"}],"termid":"MONDO:0003153","xrefs":{"Monarch":{"xref_id":"0003153"}}}


id: PBO:0059648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 14","termid":"PBO:0059648"}


id: PBO:0031578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_organization","termid":"PBO:0031578"}


id: PBO:0038529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 3, phospholipase","termid":"PBO:0038529"}


id: GO:0039519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus effect a change in the frequency, rate or extent of autophagy in the host.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host autophagy (obsolete GO:0039519)","synonyms":[{"name":"regulation by virus of host autophagy","type":"exact"}],"termid":"GO:0039519"}


id: PBO:0068898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 140, pseudogene","termid":"PBO:0068898"}


id: GO:0043136
data:
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id: PBO:0053286
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id: GO:0000992
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id: PBO:0116316
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id: MONDO:0859236
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id: GO:0035580
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id: PBO:0108833
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id: MONDO:0030718
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id: PBO:0080924
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id: PBO:0048203
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id: GO:0001633
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id: PBO:0003889
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id: PBO:0038830
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id: PBO:0090410
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id: GO:0034575
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id: PBO:0110193
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id: PBO:0017917
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id: PBO:0048307
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id: PBO:0085393
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id: MONDO:0035383
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id: GO:0051699
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id: MONDO:0018022
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id: PBO:0047040
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id: GO:0018398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-phenylalanine to form L-3'-bromophenylalanine.","definition_xrefs":["RESID:AA0175"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-phenylalanine bromination to L-3'-bromophenylalanine (obsolete GO:0018398)","termid":"GO:0018398"}


id: FYPO:0004130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of succinate dehydrogenase (ubiquinone) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal succinate dehydrogenase (ubiquinone) activity","termid":"FYPO:0003322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased succinate dehydrogenase (ubiquinone) activity","synonyms":[{"name":"reduced succinate dehydrogenase (ubiquinone) activity","type":"exact"}],"termid":"FYPO:0004130"}


id: MONDO:0023037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete elongated styloid process syndrome (obsolete MONDO:0023037)","termid":"MONDO:0023037","xrefs":{"Monarch":{"xref_id":"0023037"}}}


id: PBO:0004660
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIRA Interacting Protein","termid":"PBO:0004660"}


id: FYPO:0001685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to purvalanol A is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased RNA level during cellular response to purvalanol A","synonyms":[{"name":"increased RNA accumulation during cellular response to purvalanol A","type":"related"},{"name":"increased RNA level during cellular response to purvalanol A during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to purvalanol A during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to purvalanol A","type":"narrow"},{"name":"increased transcript level during cellular response to purvalanol A","type":"exact"}],"termid":"FYPO:0001685"}


id: PBO:0109914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYCR1 antisense RNA 1","termid":"PBO:0109914"}


id: PBO:0089183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Chl1","termid":"PBO:0089183"}


id: GO:1904966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vitamin E biosynthetic process.","definition_xrefs":["PMID:20823244","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of vitamin metabolic process","termid":"GO:0046136"},{"relation_name":"is_a","term_name":"regulation of vitamin E biosynthetic process","termid":"GO:1904965"},{"relation_name":"positively_regulates","term_name":"vitamin E biosynthetic process","termid":"GO:0010189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"positive regulation of vitamin E biosynthetic process","synonyms":[{"name":"activation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"activation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"activation of tocopherol biosynthesis","type":"narrow"},{"name":"activation of tocopherol biosynthetic process","type":"narrow"},{"name":"activation of vitamin E anabolism","type":"narrow"},{"name":"activation of vitamin E biosynthesis","type":"narrow"},{"name":"activation of vitamin E biosynthetic process","type":"narrow"},{"name":"activation of vitamin E formation","type":"narrow"},{"name":"activation of vitamin E synthesis","type":"narrow"},{"name":"positive regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"positive regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"positive regulation of tocopherol biosynthesis","type":"exact"},{"name":"positive regulation of tocopherol biosynthetic process","type":"exact"},{"name":"positive regulation of vitamin E anabolism","type":"exact"},{"name":"positive regulation of vitamin E biosynthesis","type":"exact"},{"name":"positive regulation of vitamin E formation","type":"exact"},{"name":"positive regulation of vitamin E synthesis","type":"exact"},{"name":"up regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"up regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"up regulation of tocopherol biosynthesis","type":"exact"},{"name":"up regulation of tocopherol biosynthetic process","type":"exact"},{"name":"up regulation of vitamin E anabolism","type":"exact"},{"name":"up regulation of vitamin E biosynthesis","type":"exact"},{"name":"up regulation of vitamin E biosynthetic process","type":"exact"},{"name":"up regulation of vitamin E formation","type":"exact"},{"name":"up regulation of vitamin E synthesis","type":"exact"},{"name":"up-regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"up-regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"up-regulation of tocopherol biosynthesis","type":"exact"},{"name":"up-regulation of tocopherol biosynthetic process","type":"exact"},{"name":"up-regulation of vitamin E anabolism","type":"exact"},{"name":"up-regulation of vitamin E biosynthesis","type":"exact"},{"name":"up-regulation of vitamin E biosynthetic process","type":"exact"},{"name":"up-regulation of vitamin E formation","type":"exact"},{"name":"up-regulation of vitamin E synthesis","type":"exact"},{"name":"upregulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"upregulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"upregulation of tocopherol biosynthesis","type":"exact"},{"name":"upregulation of tocopherol biosynthetic process","type":"exact"},{"name":"upregulation of vitamin E anabolism","type":"exact"},{"name":"upregulation of vitamin E biosynthesis","type":"exact"},{"name":"upregulation of vitamin E biosynthetic process","type":"exact"},{"name":"upregulation of vitamin E formation","type":"exact"},{"name":"upregulation of vitamin E synthesis","type":"exact"}],"termid":"GO:1904966"}


id: GO:0141023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts host cell adhesion ito its extracellular matrix. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host cell-cell adhesion","synonyms":[{"name":"disruption by symbiont of host cell-cell adhesion","type":"exact"}],"termid":"GO:0141023"}


id: PBO:0038799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 5 (pseudogene)","termid":"PBO:0038799"}


id: MONDO:0002286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the renal artery.","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal artery disease","secondary_identifiers":["SCTID:16934004","DOID:2388","NCIT:C101254","ICD9:593.81","MEDGEN:768693","UMLS:C3640053"],"synonyms":[{"name":"renal vascular disease","type":"exact"},{"name":"vascular disorder of kidney","type":"exact"}],"termid":"MONDO:0002286","xrefs":{"Monarch":{"xref_id":"0002286"}}}


id: PBO:0083500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YOR083W","termid":"PBO:0083500"}


id: GO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with leukotriene B4, LTB4, to initiate a change in cell activity. Leukotriene B4 is also known as (6Z, 8E, 10E, 14Z)-(5S, 12R)-5,12-dihydroxyicosa-6,8,10,14-tetraen-1-oate.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene receptor activity","termid":"GO:0004974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"leukotriene B4 receptor activity","synonyms":[{"name":"BLT receptor","type":"narrow"}],"termid":"GO:0001632"}


id: GO:0047711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: blasticidin S + H2O = deaminohydroxyblasticidin S + NH3.","definition_xrefs":["MetaCyc:BLASTICIDIN-S-DEAMINASE-RXN","EC:3.5.4.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"blasticidin-S deaminase activity","secondary_identifiers":["RHEA:10148"],"synonyms":[{"name":"blasticidin-S aminohydrolase activity","type":"related"}],"termid":"GO:0047711"}


id: FYPO:0006868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is decreased during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex","termid":"FYPO:0006867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell cortex during meiotic prophase I","synonyms":[{"name":"decreased protein localisation to cell cortex during meiotic prophase I","type":"exact"},{"name":"decreased protein localization to cell cortex during prophase I","type":"exact"},{"name":"decreased protein localization to cell cortex during prophase of meiosis I","type":"exact"},{"name":"decreased protein localization to cell cortex in zygote","type":"related"},{"name":"reduced protein localization to cell cortex during meiotic prophase I","type":"exact"}],"termid":"FYPO:0006868"}


id: PBO:0062904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-ACP synthase, mitochondrial","termid":"PBO:0062904"}


id: MONDO:0011500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Becker nevus syndrome is characterized by the presence of a Becker nevus in association with underdevelopment (hypoplasia) of the breast or other skin-related, muscular, or skeletal defects, all of which usually involve the same side of the bodyas the nevus (ipsilateral). Specific signs and symptoms in addition to the nevus may include ipsilateral breast hypoplasia; skeletal abnormalities such ashypoplasia of the shoulder girdle, scoliosis, fused ribs, and ipsilateral shortness of the arm; and several other features. Thecondition is thought to be sporadic (occurring in individuals with no history of the condition in the family). Treatment varies depending upon the specific symptoms present and the extent of the condition in the affected individual.","direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Becker nevus syndrome","secondary_identifiers":["OMIM:604919","MEDGEN:347608","Orphanet:64755","GARD:5901","UMLS:C1858042","MESH:C565735"],"synonyms":[{"name":"Becker nevus syndrome","type":"exact"},{"name":"hairy epidermal nevus syndrome","type":"related"},{"name":"pigmentary hairy epidermal nevus","type":"exact"}],"termid":"MONDO:0011500","xrefs":{"Monarch":{"xref_id":"0011500"}}}


id: MONDO:0020108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune hemolytic anemia (AIHA) is an autoimmune disorder in which various types of auto-antibodies are directed against red blood cells causing their survival to be shortened and resulting in hemolytic anemia.","definition_xrefs":["Orphanet:98375"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare acquired hemolytic anemia (obsolete MONDO:0015911)","termid":"MONDO:0015911"},{"relation_name":"is_a","term_name":"autoimmune disorder of blood","termid":"MONDO:0000602"},{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"autoimmune hemolytic anemia","secondary_identifiers":["MESH:D000744","NORD:774","ICD9:283.0","SCTID:413603009","UMLS:C0002880","GARD:5870","CSP:0427-1178","MedDRA:10002046","NCIT:C34378","OMIM:205700","EFO:1001264","DOID:718","icd11.foundation:1834341306","NANDO:2100181","MEDGEN:1918","NANDO:1200305"],"synonyms":[{"name":"AHA","type":"exact"},{"name":"AIHA","type":"exact"},{"name":"Anemia, Hemolytic, Acquired Autoimmune","type":"exact"},{"name":"acquired autoimmune hemolytic anaemia","type":"related"},{"name":"acquired autoimmune hemolytic anemia","type":"related"},{"name":"anaemia hemolytic autoimmune","type":"related"},{"name":"anemia hemolytic autoimmune","type":"related"},{"name":"anemia, autoimmune hemolytic","type":"related"},{"name":"autoimmune haemolytic anaemia","type":"exact"},{"name":"autoimmune haemolytic anemia","type":"exact"},{"name":"autoimmune hemolytic anemia","type":"exact"},{"name":"familial auto-immune hemolytic anaemia (subtype)","type":"related"},{"name":"familial auto-immune hemolytic anemia (subtype)","type":"related"},{"name":"idiopathic autoimmune hemolytic anaemia","type":"related"},{"name":"idiopathic autoimmune hemolytic anemia","type":"related"},{"name":"immuno-hemolytic anaemia","type":"related"},{"name":"immuno-hemolytic anemia","type":"related"}],"termid":"MONDO:0020108","xrefs":{"Monarch":{"xref_id":"0020108"}}}


id: PBO:0017952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex substrate recognition subunit Apc10","termid":"PBO:0017952"}


id: GO:0030809
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of nucleotide biosynthetic process","termid":"GO:0030808"},{"relation_name":"is_a","term_name":"negative regulation of nucleotide metabolic process","termid":"GO:0045980"},{"relation_name":"negatively_regulates","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"negative regulation of nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of nucleotide biosynthetic process","type":"exact"},{"name":"inhibition of nucleotide biosynthetic process","type":"narrow"},{"name":"negative regulation of nucleotide anabolism","type":"exact"},{"name":"negative regulation of nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of nucleotide formation","type":"exact"},{"name":"negative regulation of nucleotide synthesis","type":"exact"}],"termid":"GO:0030809","terms_by_termid":{"GO:1905707":null}}


id: PBO:0062834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex non-catalytic subunit","termid":"PBO:0062834"}


id: PBO:0063170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXIP1 antisense RNA 2","termid":"PBO:0063170"}


id: MONDO:0013868
data:
  {"annotated_genes":["SJAG_03349"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85946],"is_not":false,"summary":null,"term":"MONDO:0013868"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disseminated superficial actinic porokeratosis","termid":"MONDO:0019212"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03349":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis 7, multiple types","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614714","UMLS:C3553549","GARD:15838","MEDGEN:766463"],"synonyms":[{"name":"POROK7","type":"exact"},{"name":"porokeratosis 7, disseminated superficial actinic type","type":"exact"},{"name":"porokeratosis 7, multiple types","type":"exact"}],"termid":"MONDO:0013868","terms_by_termid":{"MONDO:0013868":null},"xrefs":{"Monarch":{"xref_id":"0013868"}}}


id: GO:0052866
data:
  {"annotated_genes":["SJAG_00880","SJAG_00063","SJAG_03375","SJAG_02706","SJAG_03248","SJAG_02289","SJAG_03131","SJAG_04545"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016314"},{"annotations":[108100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034485"},{"annotations":[73502,73602,74792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043813"},{"annotations":[65359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004438"},{"annotations":[73605,74795,75305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004439"},{"annotations":[73642,78003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043812"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylinositol phosphate(n) + H2O = phosphatidylinositol phosphate(n-1) + phosphate. This reaction is the removal of a phosphate group from a phosphatidylinositol phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_00880":null,"SJAG_02289":null,"SJAG_02706":null,"SJAG_03131":null,"SJAG_03248":null,"SJAG_03375":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphatidylinositol phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphoinositide phosphatase activity","type":"exact"}],"termid":"GO:0052866","terms_by_termid":{"GO:0004438":null,"GO:0004439":null,"GO:0016314":null,"GO:0034485":null,"GO:0043812":null,"GO:0043813":null}}


id: MONDO:0018574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"}],"gene_count":0,"genotype_count":0,"name":"obsolete intellectual disability-expressive aphasia-facial dysmorphism syndrome (obsolete MONDO:0018574)","secondary_identifiers":["Orphanet:436151"],"synonyms":[{"name":"intellectual disability-loss of expressive language-facial dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0018574","xrefs":{"Monarch":{"xref_id":"0018574"}}}


id: FYPO:0009059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex is increased.","definition_xrefs":["PMID:36749320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"increased protein localization to cell periphery during vegetative growth","termid":"FYPO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to cell cortex during vegetative growth","synonyms":[{"name":"higher protein localization to cell cortex during vegetative growth","type":"exact"},{"name":"increased protein localisation to cell cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0009059"}


id: MONDO:0013046
data:
  {"annotated_genes":["SJAG_00461","SJAG_02369","SJAG_02107"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84956,84957,84958],"is_not":false,"summary":null,"term":"MONDO:0013046"}]},"cv_name":"mondo","definition":"Muscle beta-enolase deficiency is a glycolysis disorder reported in one patient to date and characterized clinically by exercise intolerance and myalgia due to severe enolase deficiency in muscle.","definition_xrefs":["Orphanet:99849"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular glycogenosis (obsolete MONDO:0016118)","termid":"MONDO:0016118"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00461":null,"SJAG_02107":null,"SJAG_02369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease due to muscle beta-enolase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:612932","UMLS:C2752027","MESH:C567861","GARD:2125","MEDGEN:442873","icd11.foundation:821809975","NANDO:1200835"],"synonyms":[{"name":"GSD 13","type":"related"},{"name":"GSD due to muscle beta-enolase deficiency","type":"exact"},{"name":"GSD13","type":"related"},{"name":"GSDXIII","type":"exact"},{"name":"enolase 3 deficiency","type":"related"},{"name":"enolase-Beta deficiency","type":"related"},{"name":"glycogen storage disease 13","type":"related"},{"name":"glycogen storage disease XIII","type":"related"},{"name":"glycogen storage disease due to muscle beta-enolase deficiency","type":"exact"},{"name":"glycogen storage disease type 13","type":"exact"},{"name":"glycogenosis due to muscle beta-enolase deficiency","type":"exact"},{"name":"glycogenosis type 13","type":"exact"},{"name":"muscle enolase deficiency","type":"exact"},{"name":"muscular enolase deficiency","type":"exact"}],"termid":"MONDO:0013046","terms_by_termid":{"MONDO:0013046":null},"xrefs":{"Monarch":{"xref_id":"0013046"}}}


id: MONDO:0012965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial infantile, 4","secondary_identifiers":["UMLS:C2675462","OMIM:612627","MESH:C567231","DOID:0081117","GARD:16505","MEDGEN:436440"],"synonyms":[{"name":"BFIS4","type":"exact"},{"name":"convulsions, benign familial infantile, 4","type":"related"},{"name":"seizures, benign familial infantile, 4","type":"exact"}],"termid":"MONDO:0012965","xrefs":{"Monarch":{"xref_id":"0012965"}}}


id: PBO:0085935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; SWAT-GFP and mCherry fusion proteins localize to the cytosol; partially overlaps the verified ORF YDL010W; YDL009C is not an essential gene","termid":"PBO:0085935"}


id: PBO:0080794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-prolyl aminopeptidase 1","termid":"PBO:0080794"}


id: PBO:0029340
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_zinc","termid":"PBO:0029340"}


id: PR:Q9HE16
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe1 gene.","definition_xrefs":["UniProtKB:Q9HE16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1399.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.05c","synonyms":[{"name":"Spom972h-toe1","type":"exact"}],"termid":"PR:Q9HE16"}


id: FYPO:0003787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form mitotic spindle microtubules that are longer than normal, and extend beyond the spindle pole body. The protruding spindle microtubules are surrounded by an extension of the nuclear envelope.","definition_xrefs":["PMID:17486116","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"},{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"long mitotic spindle","termid":"FYPO:0000733"},{"relation_name":"is_a","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000120","FYPO:0001985","FYPO:0002399","FYPO:0000054","FYPO:0005447","FYPO:0002403"],"is_obsolete":false,"name":"long mitotic spindle microtubules protruding beyond spindle pole body","synonyms":[{"name":"elongated mitotic spindle microtubules protruding from spindle pole body","type":"exact"},{"name":"elongated mitotic spindle microtubules protruding from spindle pole body during M-phase","type":"exact"},{"name":"long mitotic spindle microtubules protruding beyond spindle pole body, with nuclear envelope deformation","type":"related"},{"name":"long mitotic spindle microtubules protruding beyond spindle pole body, with nuclear envelope protrusion","type":"exact"},{"name":"long mitotic spindle microtubules protruding from SPB","type":"exact"},{"name":"long mitotic spindle microtubules protruding from spindle pole body during mitotic cell cycle","type":"related"},{"name":"long mitotic spindle microtubules protruding from spindle pole body during vegetative growth","type":"exact"},{"name":"long nuclear microtubules protruding through nuclear envelope","type":"related"},{"name":"mitotic spindle microtubules protruding beyond spindle pole body","type":"broad"},{"name":"nuclear envelope protrusion with long mitotic spindle microtubules protruding beyond spindle pole body","type":"exact"}],"termid":"FYPO:0003787"}


id: PBO:0056929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase pseudogene 1","termid":"PBO:0056929"}


id: PR:Q10110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase I-specific transcription initiation factor RRN3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12790:SF0","OMA:SCHPO00921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.11c","secondary_identifiers":["UniProtKB:Q10110"],"synonyms":[{"name":"Spom972h-RRN3","type":"exact"}],"termid":"PR:Q10110"}


id: PBO:0059035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 24","termid":"PBO:0059035"}


id: PBO:0059534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription terminator","termid":"PBO:0059534"}


id: GO:0042931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of the siderochrome enterochelin, a cyclic trimer of 2, 3 dihydroxybenzoylserine from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"enterobactin transmembrane transporter activity","synonyms":[{"name":"enterobactin transporter activity","type":"related"},{"name":"enterochelin transporter activity","type":"exact"}],"termid":"GO:0042931"}


id: MONDO:0020030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic renal disease (obsolete MONDO:0020030)","secondary_identifiers":["Orphanet:98056"],"termid":"MONDO:0020030","xrefs":{"Monarch":{"xref_id":"0020030"}}}


id: PBO:0083589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YHR212C has a paralog, YAR060C, that arose from a segmental duplication","termid":"PBO:0083589"}


id: PBO:0038551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 6","termid":"PBO:0038551"}


id: PBO:0085758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in oxidative stress response; promotes pseudohyphal growth via activation of Ubp3p phosphorylation; identified as suppressor of S. pombe cell cycle checkpoint mutations; RCK1 has a paralog, RCK2, that arose from the whole genome duplication","termid":"PBO:0085758"}


id: GO:0097748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1); the synthesis of RNA from ribonucleotide triphosphates in the presence of a nucleic acid template, via extension of the 5'-end.","definition_xrefs":["PMID:30917604","PMID:22456265","PMID:27484477","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase activity","termid":"GO:0097747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0003824","GO:0016740","GO:0140098"],"is_obsolete":false,"name":"3'-5' RNA polymerase activity","secondary_identifiers":["RHEA:57528"],"termid":"GO:0097748"}


id: PATO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being arranged in a systematic fashion.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organization quality","termid":"PATO:0002264"}


id: PBO:0080814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6 pseudogene 4","termid":"PBO:0080814"}


id: GO:0004533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage of RNA to 5'-phosphomonoester oligonucleotides in both 5' to 3' and 3' to 5' directions.","definition_xrefs":["EC:3.1.13.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0140098","GO:0004527","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"exoribonuclease H activity","secondary_identifiers":["MetaCyc:3.1.13.2-RXN"],"synonyms":[{"name":"retroviral reverse transcriptase RNaseH","type":"related"}],"termid":"GO:0004533"}


id: FYPO:0000364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal plasma membrane morphology during vegetative growth","synonyms":[{"name":"abnormal plasma membrane morphology during mitotic cell cycle","type":"related"},{"name":"plasma membrane morphology: abnormal","type":"related"}],"termid":"FYPO:0000364"}


id: GO:0035131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the pelvic fin are generated and organized. The pelvic fins are bilaterally paired fins mounted in a ventral-lateral position on most fish. These fins are used primarily for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"is_a","term_name":"pelvic fin morphogenesis","termid":"GO:0035139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic pelvic fin morphogenesis","termid":"GO:0035131"}


id: PBO:0053822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1085","termid":"PBO:0053822"}


id: PBO:0116711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily B member 2","termid":"PBO:0116711"}


id: MONDO:0060568
data:
  {"annotated_genes":["SJAG_01653","SJAG_04038"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85072,85073],"is_not":false,"summary":null,"term":"MONDO:0060568"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01653":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Pilarowski-Bjornsson syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17970","MEDGEN:1619150","Orphanet:529965","OMIM:617682","UMLS:C4540131"],"synonyms":[{"name":"PILBOS","type":"related"},{"name":"Pilarowski-Bjornsson syndrome","type":"exact"},{"name":"developmental delay and speech apraxia with or without seizures","type":"related"}],"termid":"MONDO:0060568","terms_by_termid":{"MONDO:0060568":null},"xrefs":{"Monarch":{"xref_id":"0060568"}}}


id: GO:0010241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The three successive oxidations of the 4-methyl group of ent-kaurene to form ent-kaur-16-en-19-oate, kaurenoic acid. This process may be carried out entirely by the enzyme ent-kaurene oxidase.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ent-kaurene metabolic process","termid":"GO:0033331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ent-kaurene oxidation to kaurenoic acid","synonyms":[{"name":"ent-kaurene oxidation to ent-kaur-16-en-19-oate","type":"exact"},{"name":"ent-kaurene oxidation to ent-kaurenoate","type":"exact"},{"name":"ent-kaurene oxidation to kaurenoic acid by ent-kaurene oxidase","type":"exact"}],"termid":"GO:0010241"}


id: GO:0046882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of follicle-stimulating hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gonadotropin secretion","termid":"GO:0032277"},{"relation_name":"is_a","term_name":"regulation of follicle-stimulating hormone secretion","termid":"GO:0046880"},{"relation_name":"negatively_regulates","term_name":"follicle-stimulating hormone secretion","termid":"GO:0046884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of follicle-stimulating hormone secretion","synonyms":[{"name":"down regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"down-regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"downregulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"inhibition of follicle-stimulating hormone secretion","type":"narrow"},{"name":"negative regulation of follicle stimulating hormone secretion","type":"exact"}],"termid":"GO:0046882"}


id: PBO:0087103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein 51 (rp51) of the small (40s) subunit; homologous to mammalian ribosomal protein S17, no bacterial homolog; RPS17B has a paralog, RPS17A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087103"}


id: PBO:0051058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3-10","termid":"PBO:0051058"}


id: GO:0061555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of a ganglion. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"ganglion morphogenesis","termid":"GO:0061552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion structural organization","synonyms":[{"name":"ganglia structural organization","type":"related"}],"termid":"GO:0061555"}


id: GO:0043086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of an enzyme.","definition_xrefs":["GOC:jl","GOC:ebc","GOC:tb","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of catalytic activity","secondary_identifiers":["GO:0048553"],"synonyms":[{"name":"down regulation of enzyme activity","type":"exact"},{"name":"down regulation of metalloenzyme activity","type":"narrow"},{"name":"down-regulation of enzyme activity","type":"exact"},{"name":"down-regulation of metalloenzyme activity","type":"exact"},{"name":"downregulation of enzyme activity","type":"exact"},{"name":"downregulation of metalloenzyme activity","type":"narrow"},{"name":"inhibition of enzyme activity","type":"narrow"},{"name":"inhibition of metalloenzyme activity","type":"narrow"},{"name":"negative regulation of enzyme activity","type":"exact"},{"name":"negative regulation of metalloenzyme activity","type":"narrow"}],"termid":"GO:0043086"}


id: MONDO:0007861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated cloverleaf skull syndrome is a form of craniosynostosis involving multiple sutures (coronal, lambdoidal, sagittal and metopic) characterized by a trilobular skull of varying severity (frontal towering and bossing, temporal bulging and a flat posterior skull), dysmorphic features (downslanting palpebral fissures, midface hypoplasia, and extreme proptosis) and that is complicated by hydrocephalus, cerebral venous hypertension, developmental delay/intellectual disability and hind brain herniation.","definition_xrefs":["Orphanet:2343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated craniosynostosis","termid":"MONDO:0015337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"isolated cloverleaf skull syndrome","secondary_identifiers":["GARD:3115","MEDGEN:98141","OMIM:148800","SCTID:254022009","UMLS:C0432126","MESH:C536884"],"synonyms":[{"name":"KLEEBLATTSCHAEDEL","type":"related"},{"name":"Kleeblattschadel","type":"related"},{"name":"Kleeblattschaedel deformity syndrome","type":"related"},{"name":"Kleeblattschaedel syndrome","type":"related"},{"name":"Kleeblattschaedel-deformity syndrome","type":"related"},{"name":"cloverleaf skull","type":"related"},{"name":"cloverleaf skull syndrome","type":"related"},{"name":"isolated cloverleaf skull syndrome","type":"exact"}],"termid":"MONDO:0007861","xrefs":{"Monarch":{"xref_id":"0007861"}}}


id: PBO:0090562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, disaggregase Hsp104","termid":"PBO:0090562"}


id: FYECO:0000230
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in glucose-based medium containing much less nitrogen than standard minimal medium (such as EMM). Note that for mating assays sporulation medium may be more appropriate.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low nitrogen glucose MM","synonyms":[{"name":"low nitrogen glucose minimal medium","type":"exact"}],"termid":"FYECO:0000230"}


id: PBO:0090984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Rrp3","termid":"PBO:0090984"}


id: MONDO:0001478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of an inequality of refractive power of the two eyes.","definition_xrefs":["MESH:D015858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"refractive error","termid":"MONDO:0004892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anisometropia","secondary_identifiers":["MEDGEN:8099","UMLS:C0003081","HP:0012803","icd11.foundation:386251928","SCTID:3289004","DOID:12273","ICD10CM:H52.31","ICD9:367.31","CSP:1116-1678"],"synonyms":[{"name":"anisometropia","type":"exact"},{"name":"anisometropia (disease)","type":"exact"}],"termid":"MONDO:0001478","xrefs":{"Monarch":{"xref_id":"0001478"}}}


