# terms

id: MONDO:0003851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type of teratoma that arises from the ovary and resembles a malformed fetus.","definition_xrefs":["NCIT:C39996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature ovarian teratoma","termid":"MONDO:0003820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian fetiform teratoma","secondary_identifiers":["DOID:6314","MEDGEN:276666","UMLS:C1518715"],"synonyms":[{"name":"homunculus","type":"exact"},{"name":"ovarian fetiform teratoma","type":"exact"}],"termid":"MONDO:0003851","xrefs":{"Monarch":{"xref_id":"0003851"}}}


id: SO:0001345
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:053"],"synonyms":[{"name":"2'-O-methyluridine","type":"exact"},{"name":"Um","type":"exact"},{"name":"two prime O methyluridine","type":"exact"}],"termid":"SO:0001345"}


id: GO:2000683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to X-ray.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to X-ray","termid":"GO:0071481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to X-ray","synonyms":[{"name":"regulation of cellular response to X-ray radiation stimulus","type":"exact"}],"termid":"GO:2000683"}


id: PBO:0031067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_normal_germ_tube_morphology","termid":"PBO:0031067"}


id: PBO:0046131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4H pseudogene 1","termid":"PBO:0046131"}


id: GO:0019543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionate, the anion derived from propionic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"},{"relation_name":"is_a","term_name":"short-chain fatty acid catabolic process","termid":"GO:0019626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"propionate catabolic process","synonyms":[{"name":"propionate breakdown","type":"exact"},{"name":"propionate catabolism","type":"exact"},{"name":"propionate degradation","type":"exact"}],"termid":"GO:0019543"}


id: GO:0010188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a microbial phytotoxin stimulus. A microbial phytotoxin is a chemical substance produced by microbes which is toxic to plants.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to microbial phytotoxin","termid":"GO:0010188"}


id: PBO:0045852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 42","termid":"PBO:0045852"}


id: PBO:0080428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 12","termid":"PBO:0080428"}


id: FYPO:0004373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is abnormal. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0007095","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"},{"relation_name":"is_a","term_name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic G2 DNA damage checkpoint","synonyms":[{"name":"abnormal G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic G2 DNA damage checkpoint activation","type":"related"},{"name":"abnormal mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0004373"}


id: GO:0030749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + loganate = S-adenosyl-L-homocysteine + loganin.","definition_xrefs":["EC:2.1.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"loganate O-methyltransferase activity","secondary_identifiers":["MetaCyc:LOGANATE-O-METHYLTRANSFERASE-RXN","RHEA:12508"],"synonyms":[{"name":"S-adenosyl-L-methionine:loganate 11-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:loganic acid methyltransferase activity","type":"related"},{"name":"loganate methyltransferase activity","type":"related"}],"termid":"GO:0030749"}


id: GO:1905763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MTREC complex.","definition_xrefs":["PMID:26942678","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MTREC complex binding","synonyms":[{"name":"Mtl1-Red1 core complex binding","type":"exact"},{"name":"NURS complex binding","type":"exact"},{"name":"PAXT complex binding","type":"exact"}],"termid":"GO:1905763"}


id: MONDO:0002119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well circumscribed lesion of the bone, most frequently arising from the posterior mandible. It is characterized by the presence of fibrous tissue and a mineralized component which may be woven bone, lamellar bone, or cementum-like material. Complete removal is recommended, since it continues to enlarge if left untreated.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ossifying fibroma","secondary_identifiers":["ICDO:9262/0","NCIT:C8422","NCIT:C173820","MEDGEN:104906","DOID:180","HP:0030426","MESH:D018214","NORD:111729","UMLS:C0206640","ICDO:9274/0"],"synonyms":[{"name":"Cementifying fibroma","type":"exact"},{"name":"Juvenile Ossifying Fibroma","type":"narrow"},{"name":"cemento-ossifying fibroma","type":"exact"},{"name":"fibro-osteoma","type":"exact"},{"name":"fibroma, ossifying, benign","type":"exact"},{"name":"juvenile ossifying fibroma","type":"narrow"},{"name":"ossifying fibroma","type":"exact"},{"name":"ossifying fibroma (disease)","type":"exact"},{"name":"peripheral ossifying fibroma","type":"related"}],"termid":"MONDO:0002119","xrefs":{"Monarch":{"xref_id":"0002119"}}}


id: PBO:0069541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 811, pseudogene","termid":"PBO:0069541"}


id: FYPO:0005675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type) after cells have been exposed to methyl methanesulfonate.","definition_xrefs":["PomBase:mah","PMID:27151298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein deubiquitination following cellular response to methyl methanesulfonate during vegetative growth","synonyms":[{"name":"normal protein deubiquitination during cellular response to methyl methanesulfonate","type":"related"},{"name":"normal protein deubiquitination following cellular response to MMS","type":"exact"},{"name":"normal protein deubiquitination following cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein deubiquitylation following cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005675"}


id: PBO:0086655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; haploid deletion mutant exhibits synthetic phenotype with alpha-synuclein; SWAT-GFP fusion protein localizes to the endoplasmic reticulum while mCherry fusion protein localizes to both the endoplasmic reticulum and vacuole","termid":"PBO:0086655"}


id: PBO:0017413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-precedes","termid":"PBO:0017413"}


id: GO:0015894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of acriflavine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acriflavine is a fluorescent dye used as a local antiseptic and also as a biological stain. It intercalates into nucleic acids thereby inhibiting bacterial and viral replication.","definition_xrefs":["PubChem_Compound:6842","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acriflavine transport (obsolete GO:0015894)","synonyms":[{"name":"acriflavin transport","type":"related"}],"termid":"GO:0015894"}


id: GO:0060257
data:
  {"annotated_genes":["SJAG_00926","SJAG_03473"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103348,106052],"is_not":false,"summary":null,"term":"GO:0060257"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the non-sexual aggregation of single-celled organisms.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of flocculation","termid":"GO:0060256"},{"relation_name":"negatively_regulates","term_name":"flocculation","termid":"GO:0000128"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00926":null,"SJAG_03473":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of flocculation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901134"],"synonyms":[{"name":"negative regulation of coflocculation","type":"narrow"}],"termid":"GO:0060257","terms_by_termid":{"GO:0060257":null}}


id: GO:0002814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-negative bacteria.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antibacterial peptide biosynthetic process","termid":"GO:0002809"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002813"},{"relation_name":"negatively_regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","synonyms":[{"name":"down regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"down-regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"downregulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"inhibition of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"narrow"}],"termid":"GO:0002814"}


id: GO:0007436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the larva, by which the anatomical structures of the salivary gland are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland morphogenesis","termid":"GO:0007435"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval salivary gland morphogenesis","termid":"GO:0007436"}


id: PR:O14225
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import receptor subunit TOM20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00536","PRO:DNx","PANTHER:PTHR12430:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import receptor subunit tom20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.07","secondary_identifiers":["UniProtKB:O14225"],"synonyms":[{"name":"Spom972h-TOMM20","type":"exact"},{"name":"mitochondrial 20 kDa outer membrane protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translocase of outer membrane 20 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14225"}


id: MONDO:0016435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acquired dermis elastic tissue disorder with decreased elastic tissue (obsolete MONDO:0016435)","secondary_identifiers":["Orphanet:228221"],"termid":"MONDO:0016435","xrefs":{"Monarch":{"xref_id":"0016435"}}}


id: MONDO:1011464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in black-footed cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, black-footed cat","secondary_identifiers":["OMIA:000037-61379"],"termid":"MONDO:1011464","xrefs":{"Monarch":{"xref_id":"1011464"}}}


id: SO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A long non-coding transcript that contains a protein coding gene within its intronic sequence on the same strand, with no overlap of exonic sequence.","definition_xrefs":["GENECODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA","termid":"SO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sense_overlap_lncRNA","synonyms":[{"name":"sense overlap lncRNA","type":"exact"},{"name":"sense_overlap_lncRNA","type":"exact"},{"name":"sense_overlapping","type":"exact"}],"termid":"SO:0002132"}


id: PBO:0067090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 126, pseudogene","termid":"PBO:0067090"}


id: GO:0072242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric distal convoluted tubule cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DCT cell fate commitment","termid":"GO:0072146"},{"relation_name":"part_of","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric DCT cell fate commitment","synonyms":[{"name":"metanephric distal convoluted tubule cell fate commitment","type":"exact"}],"termid":"GO:0072242"}


id: PBO:0113520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase; role in proteasome-dependent degradation of aberrant nuclear proteins; targets substrates with regions of exposed hydrophobicity; contains intrinsically disordered regions involved in substrate recognition; prefers a window of exposed hydrophobicity that causes a particular level of protein insolubility, suggesting that San1p evolved to target highly aggregation-prone proteins; localizes to the cytoplasm, nucleus and peroxisomes","termid":"PBO:0113520"}


id: PBO:0051044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 1-7","termid":"PBO:0051044"}


id: PBO:0086906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative UTP glucose-1-phosphate uridylyltransferase; YHL012W has a paralog, UGP1, that arose from the whole genome duplication","termid":"PBO:0086906"}


id: PBO:0065263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR23 family member E","termid":"PBO:0065263"}


id: PBO:0082628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of CORVET membrane tethering complex; cytoplasmic protein required for the sorting and processing of soluble vacuolar proteins, acidification of the vacuolar lumen, and assembly of the vacuolar H+-ATPase","termid":"PBO:0082628"}


id: PBO:0064279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RUN domain containing M1","termid":"PBO:0064279"}


id: PBO:0064894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B''gamma","termid":"PBO:0064894"}


id: MONDO:0032761
data:
  {"annotated_genes":["SJAG_04554"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86942],"is_not":false,"summary":null,"term":"MONDO:0032761"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04554":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 114","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22662","DOID:0111642","MEDGEN:1684024","OMIM:618456","UMLS:C5193107"],"synonyms":[{"name":"DFNB114","type":"narrow"},{"name":"deafness, autosomal recessive 114","type":"narrow"}],"termid":"MONDO:0032761","terms_by_termid":{"MONDO:0032761":null},"xrefs":{"Monarch":{"xref_id":"0032761"}}}


id: PBO:0064202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta associated 9","termid":"PBO:0064202"}


id: PBO:0058207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4500","termid":"PBO:0058207"}


id: PBO:0063132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARP1 binding protein","termid":"PBO:0063132"}


id: GO:0099170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process, acting in the postsynapse that results in modulation of chemical synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"postsynaptic modulation of chemical synaptic transmission","termid":"GO:0099170"}


id: GO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Smallest subunit of a heterotrimeric G-protein GTPase; associates tightly with the beta subunit.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete heterotrimeric G-protein GTPase, gamma-subunit (obsolete GO:0000265)","synonyms":[{"name":"heterotrimeric G-protein GTPase, gamma-subunit","type":"exact"}],"termid":"GO:0000265"}


id: PBO:0046195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A","termid":"PBO:0046195"}


id: PBO:0045366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 2","termid":"PBO:0045366"}


id: PATO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000293 absolute activity value (obsolete PATO:0000293)","termid":"PATO:0000293"}


id: MONDO:0016537
data:
  {"annotated_genes":["SJAG_03453","SJAG_01787","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013767"},{"annotations":[85620,85619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000024"}]},"cv_name":"mondo","definition":"A disorder characterized by proliferation of lymphocytes at various stages of differentiation. Lymphoproliferative disorders can be neoplastic (clonal, as in lymphomas and leukemias) or reactive (polyclonal, as in infectious mononucleosis).","definition_xrefs":["NCIT:C9308"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphoproliferative syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D008232","MEDGEN:6162","SCTID:277466009","Orphanet:238510","UMLS:C0024314","GARD:20633","OMIMPS:308240","DOID:0060704"],"synonyms":[{"name":"lymphoproliferative disorder","type":"exact"},{"name":"lymphoproliferative syndrome","type":"exact"}],"termid":"MONDO:0016537","terms_by_termid":{"MONDO:0013767":null,"MONDO:8000024":null},"xrefs":{"Monarch":{"xref_id":"0016537"}}}


id: GO:0035543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of assembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of SNARE complex assembly","termid":"GO:0035542"},{"relation_name":"positively_regulates","term_name":"SNARE complex assembly","termid":"GO:0035493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0006810","GO:0016192","GO:0061024","GO:0065003"],"is_obsolete":false,"name":"positive regulation of SNARE complex assembly","termid":"GO:0035543"}


id: GO:0043218
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the myelin sheath in which layers of cell membrane are tightly juxtaposed, completely excluding cytoplasm. The juxtaposed cytoplasmic surfaces form the major dense line, while the juxtaposed extracellular surfaces form the interperiod line visible in electron micrographs.","definition_xrefs":["GOC:dgh","NIF_Subcellular:sao1123256993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myelin sheath","termid":"GO:0043209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"compact myelin","synonyms":[{"name":"Schwann cell compact myelin","type":"narrow"},{"name":"oligodendrocyte compact myelin","type":"narrow"}],"termid":"GO:0043218"}


id: GO:0022879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + trehalose(out) = protein histidine + trehalose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"trehalose transmembrane transporter activity","termid":"GO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0016740","GO:0003674","GO:0003824","GO:0022857"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-trehalose phosphotransferase system transporter activity","synonyms":[{"name":"trehalose PTS transporter activity","type":"exact"}],"termid":"GO:0022879"}


id: MONDO:0014746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066","MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"SLC39A8-CDG","secondary_identifiers":["Orphanet:468699","GARD:17846","UMLS:C4225234","OMIM:616721","MEDGEN:899837","DOID:0070266"],"synonyms":[{"name":"CDG IIn","type":"related"},{"name":"CDG syndrome type IIn","type":"exact"},{"name":"CDG-IIn","type":"exact"},{"name":"CDG2N","type":"exact"},{"name":"SLC39A8 deficiency","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIn","type":"exact"},{"name":"congenital disorder of glycosylation type 2n","type":"exact"},{"name":"congenital disorder of glycosylation type IIn","type":"exact"},{"name":"congenital disorder of glycosylation, type IIn","type":"exact"}],"termid":"MONDO:0014746","xrefs":{"Monarch":{"xref_id":"0014746"}}}


id: MONDO:0006216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polypoid epithelial neoplasm that arises from the gallbladder. According to the neoplastic growth pattern, it is classified as tubular, tubulopapillary, or papillary.","definition_xrefs":["NCIT:C7720"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"biliary tract neoplasm","termid":"MONDO:0005304"},{"relation_name":"is_a","term_name":"digestive system adenoma","termid":"MONDO:0006180"},{"relation_name":"is_a","term_name":"gallbladder neoplasm","termid":"MONDO:0021253"},{"relation_name":"is_a","term_name":"polyp of gallbladder","termid":"MONDO:0021416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"gallbladder adenoma","secondary_identifiers":["MEDGEN:116046","EFO:1000263","UMLS:C0238137","DOID:0050893"],"synonyms":[{"name":"adenoma of gallbladder","type":"exact"},{"name":"adenoma of the gallbladder","type":"exact"},{"name":"gall bladder adenoma","type":"exact"},{"name":"gallbladder adenoma","type":"exact"}],"termid":"MONDO:0006216","xrefs":{"Monarch":{"xref_id":"0006216"}}}


id: FYPO:0000456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone acetylation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"},{"relation_name":"is_a","term_name":"abnormal protein acetylation during vegetative growth","termid":"FYPO:0002392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone acetylation during vegetative growth","synonyms":[{"name":"abnormal histone acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000456"}


id: GO:0061973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bone which forms deep in the organism are generated and organized.","definition_xrefs":["PMID:14579374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane bone morphogenesis","termid":"GO:0061973"}


id: PR:O14008
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cam2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin 1 light chain cam2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.05","synonyms":[{"name":"Spom972h-cam2","type":"exact"},{"name":"calmodulin-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14008"}


id: GO:0047337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl diphosphate + long-chain-polyphosphate = dolichol-phosphate + long-chain-polyphosphate.","definition_xrefs":["EC:2.7.4.20","MetaCyc:2.7.4.20-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"dolichyl-diphosphate-polyphosphate phosphotransferase activity","secondary_identifiers":["RHEA:19417"],"synonyms":[{"name":"dolichyl-diphosphate:polyphosphate phosphotransferase activity","type":"related"},{"name":"dolichylpyrophosphate:polyphosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047337"}


id: PBO:0068414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA guanylyltransferase and 5'-phosphatase","termid":"PBO:0068414"}


id: PBO:0044953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyhypusine synthase","termid":"PBO:0044953"}


id: PBO:0116630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 4 pseudogene 3","termid":"PBO:0116630"}


id: PBO:0039997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 9","termid":"PBO:0039997"}


id: PBO:0078695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 6-1","termid":"PBO:0078695"}


id: MONDO:0100304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any peroxisomal single enzyme/protein defect that has its basis in the disruption of bile acid aminotransferase.","definition_xrefs":["MONDO:patterns/inborn_metabolic_disrupts"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal single enzyme/protein defect","termid":"MONDO:0100257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"disorder of bile acid aminotransferase","synonyms":[{"name":"disorder of bile acid aminotransferase","type":"exact"}],"termid":"MONDO:0100304","xrefs":{"Monarch":{"xref_id":"0100304"}}}


id: GO:0042403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid hormone metabolic process","secondary_identifiers":["Reactome:R-HSA-350864"],"synonyms":[{"name":"thyroid hormone metabolism","type":"exact"}],"termid":"GO:0042403"}


id: FYPO:0001076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal level of substance in cell","termid":"FYPO:0001076"}


id: PBO:0034800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress associated Endoplasmic Reticulum protein Tam14","termid":"PBO:0034800"}


id: GO:0061048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of branching involved in lung morphogenesis","termid":"GO:0061046"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branching involved in lung morphogenesis","termid":"GO:0061048"}


id: PBO:0071982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 11","termid":"PBO:0071982"}


id: PBO:0083768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential non-ATPase regulatory subunit of the 26S proteasome; similar to another S. cerevisiae regulatory subunit, Rpn5p, as well as to mammalian proteasome subunits","termid":"PBO:0083768"}


id: GO:1990946
data:
  {"annotated_genes":["SJAG_01515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98492],"is_not":false,"summary":null,"term":"GO:1990946"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from meiosis I to meiosis II.","definition_xrefs":["PMID:21389117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase transition","termid":"GO:0044771"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01515":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiosis I/meiosis II transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990946","terms_by_termid":{"GO:1990946":null}}


id: RO:HOM0000073
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Synology that results from allopolyploidy.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_ohnology_relationship_with","termid":"RO:HOM0000022"},{"relation_name":"is_a","term_name":"in_synology_relationship_with","termid":"RO:HOM0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homoeology_relationship_with","synonyms":[{"name":"homoeologous to","type":"exact"}],"termid":"RO:HOM0000073"}


id: GO:0031304
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial inner membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of mitochondrial inner membrane (obsolete GO:0031304)","synonyms":[{"name":"intrinsic to mitochondrial inner membrane","type":"narrow"}],"termid":"GO:0031304"}


id: PBO:0088073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease, deubiquitinates Ub-protein moieties; interacts with proteins that function in rRNA production and ribosome biogenesis via its intrinsically disordered regions; stabilizes Rpa190p by deubiquitination; controls PCNA deubiquitylation; may regulate silencing by acting on Sir4p; involved in posttranscriptionally regulating Gap1p, possibly other transporters; localized to the nucleolus; null mutant phenotypes are functionally complemented by human USP36","termid":"PBO:0088073"}


id: PATO:0000594
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000594 relative volume value (obsolete PATO:0000594)","termid":"PATO:0000594"}


id: MOD:00908
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies a glycine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified glycine residue","synonyms":[{"name":"ModGly","type":"exact"}],"termid":"MOD:00908"}


id: PBO:0074688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 68","termid":"PBO:0074688"}


id: MOD:00664
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue L-enantiomer (stereoisomer) with a D-enantiomer or with a different diastereomeric isomer.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stereoisomerized residue","synonyms":[{"name":"D-Res","type":"exact"}],"termid":"MOD:00664"}


id: PBO:0038904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRD1 antisense RNA 1","termid":"PBO:0038904"}


id: PBO:0050283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor serpin domain containing","termid":"PBO:0050283"}


id: PBO:0073746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3 pseudogene 2","termid":"PBO:0073746"}


id: PBO:0068203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 510","termid":"PBO:0068203"}


id: PBO:0069840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1126, pseudogene","termid":"PBO:0069840"}


id: MONDO:0001610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of dacryocystitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dacryocystitis","termid":"MONDO:0004926"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute dacryocystitis","secondary_identifiers":["icd11.foundation:743890238","SCTID:25470000","ICD9:375.32","MEDGEN:509863","UMLS:C0155237","DOID:12996"],"synonyms":[{"name":"dacryocystitis - acute","type":"exact"},{"name":"dacryocystitis, acute","type":"exact"}],"termid":"MONDO:0001610","xrefs":{"Monarch":{"xref_id":"0001610"}}}


id: PBO:0083048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dethiobiotin synthetase; catalyzes the third step in the biotin biosynthesis pathway; BIO4 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis; BIO3 and BIO4 were acquired by horizontal gene transfer (HGT) from bacteria; expression appears to be repressed at low iron levels","termid":"PBO:0083048"}


id: FYPO:0003247
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone H3 binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone binding","termid":"FYPO:0007157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"abolished histone H3 binding","synonyms":[{"name":"abolished protein-histone H3 interaction","type":"exact"},{"name":"histone H3 binding abolished","type":"exact"}],"termid":"FYPO:0003247"}


id: PBO:0025546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP2A regulatory subunit B-56 Par1","termid":"PBO:0025546"}


id: MONDO:0003748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An overwhelming, irrational, and persistent fear of traveling in an aircraft.","definition_xrefs":["NCIT:C35413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific phobia","termid":"MONDO:0012000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flying phobia","secondary_identifiers":["EFO:1001889","DOID:605","MEDGEN:83369","UMLS:C0344318"],"termid":"MONDO:0003748","xrefs":{"Monarch":{"xref_id":"0003748"}}}


id: MONDO:1010139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrichia with papular lesions that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"skin appendage disorder, non-human animal","termid":"MONDO:1011358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrichia with papular lesions, non-human animal","secondary_identifiers":["OMIA:001348"],"termid":"MONDO:1010139","xrefs":{"Monarch":{"xref_id":"1010139"}}}


id: GO:0008819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cobinamide + ATP = cobinamide phosphate + ADP. This reaction is the phosphorylation of the hydroxyl group of the 1-amino-2-propanol residue of cobinamide, in the presence of ATP, to form cobinamide phosphate.","definition_xrefs":["PMID:1655696"],"gene_count":0,"genotype_count":0,"name":"obsolete cobinamide kinase activity (obsolete GO:0008819)","termid":"GO:0008819"}


id: PBO:0047850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p31.2)","termid":"PBO:0047850"}


id: GO:0047512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S,S)-butane-2,3-diol + NAD+ = acetoin + H+ + NADH.","definition_xrefs":["RHEA:12184","EC:1.1.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S,S)-butanediol dehydrogenase activity","secondary_identifiers":["MetaCyc:SS-BUTANEDIOL-DEHYDROGENASE-RXN","KEGG_REACTION:R03707"],"synonyms":[{"name":"(S,S)-butane-2,3-diol:NAD+ oxidoreductase activity","type":"related"},{"name":"L(+)-2,3-butanediol dehydrogenase (L-acetoin forming)","type":"related"},{"name":"L-BDH","type":"related"},{"name":"L-butanediol dehydrogenase activity","type":"related"}],"termid":"GO:0047512"}


id: FYPO:0002067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population grows more slowly than normal when the population has been in stationary phase and is then placed in conditions that allow recovery.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"slow vegetative cell population growth","termid":"FYPO:0001234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002057","FYPO:0002060","FYPO:0005447"],"is_obsolete":false,"name":"slow cell population growth during recovery from stationary phase","termid":"FYPO:0002067"}


id: PBO:0050907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced with helicase C domain 1","termid":"PBO:0050907"}


id: GO:0014718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of activation of satellite cell involved in skeletal muscle regeneration. The activation of satellite cell is the process that initiates satellite cell division by causing it to move from quiescence to the G1 stage of the cell cycle. The cell swells and there are a number of other small changes. The cells then start to divide. Following cell division the cells will differentiate.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014717"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue regeneration","termid":"GO:0043415"},{"relation_name":"is_a","term_name":"positive regulation of cell activation","termid":"GO:0050867"},{"relation_name":"positively_regulates","term_name":"satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014718"}


id: GO:0034052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the hypersensitive response in a plant.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant-type hypersensitive response","termid":"GO:0010363"},{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"positively_regulates","term_name":"plant-type hypersensitive response","termid":"GO:0009626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of plant-type hypersensitive response","synonyms":[{"name":"activation of plant-type hypersensitive response","type":"narrow"},{"name":"positive regulation of HR","type":"exact"},{"name":"positive regulation of HR-PCD","type":"related"},{"name":"positive regulation of plant hypersensitive response","type":"exact"},{"name":"stimulation of plant-type hypersensitive response","type":"narrow"},{"name":"up regulation of plant-type hypersensitive response","type":"exact"},{"name":"up-regulation of plant-type hypersensitive response","type":"exact"},{"name":"upregulation of plant-type hypersensitive response","type":"exact"}],"termid":"GO:0034052"}


id: GO:0004965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:ai","Wikipedia:GABAB_receptor","IUPHAR_RECEPTOR:1276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"GABA receptor activity","termid":"GO:0016917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled GABA receptor activity","secondary_identifiers":["Reactome:R-HSA-1013012","Reactome:R-HSA-1013013"],"synonyms":[{"name":"G-protein coupled GABA receptor activity","type":"exact"},{"name":"GABA-B receptor activity","type":"related"},{"name":"metabotropic GABA receptor","type":"related"}],"termid":"GO:0004965"}


id: GO:0036315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sterol stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sterol","termid":"GO:0036314"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sterol","termid":"GO:0036315"}


id: MONDO:0024255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic skin disease (obsolete MONDO:0024255)","termid":"MONDO:0024255","xrefs":{"Monarch":{"xref_id":"0024255"}}}


id: PBO:0003868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex anchor subunit Tim18","termid":"PBO:0003868"}


id: PBO:0042612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 12","termid":"PBO:0042612"}


id: GO:0075118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont alters or subverts the normal execution of a host G protein-coupled receptor signal transduction pathway. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host receptor-mediated signal transduction","termid":"GO:0075109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host G protein-coupled receptor signal transduction pathway","secondary_identifiers":["GO:0075124","GO:0075127","GO:0075121"],"synonyms":[{"name":"modulation by symbiont of host G protein-coupled receptor signal transduction","type":"exact"},{"name":"modulation by symbiont of host G-protein coupled receptor protein signal transduction","type":"exact"},{"name":"modulation by symbiont of host signal transduction mediated by G-protein alpha subunit","type":"narrow"},{"name":"modulation by symbiont of host signal transduction mediated by G-protein beta subunit","type":"narrow"},{"name":"modulation by symbiont of host signal transduction mediated by G-protein gamma subunit","type":"narrow"},{"name":"perturbation of host G protein-coupled receptor signal transduction pathway","type":"exact"}],"termid":"GO:0075118"}


id: PBO:0068346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 122","termid":"PBO:0068346"}


id: GO:0031643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation of a myelin sheath around nerve axons.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myelination","termid":"GO:0031641"},{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myelination","synonyms":[{"name":"activation of myelination","type":"narrow"},{"name":"stimulation of myelination","type":"narrow"},{"name":"up regulation of myelination","type":"exact"},{"name":"up-regulation of myelination","type":"exact"},{"name":"upregulation of myelination","type":"exact"}],"termid":"GO:0031643"}


id: PBO:0073451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor SWAP","termid":"PBO:0073451"}


id: GO:0030129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin coat found on a synaptic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin vesicle coat","termid":"GO:0030125"},{"relation_name":"part_of","term_name":"synaptic vesicle membrane","termid":"GO:0030672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"clathrin coat of synaptic vesicle","termid":"GO:0030129"}


id: PATO:0001851
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's exhibiting transient abnormal enlargement, not due to cell proliferation.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"has_part","term_name":"protruding","termid":"PATO:0001598"},{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swollen","synonyms":[{"name":"swelling","type":"narrow"}],"termid":"PATO:0001851"}


id: PBO:0034229
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of_negatively_regulating","termid":"PBO:0034229"}


id: MONDO:0014091
data:
  {"annotated_genes":["SJAG_02564"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84909],"is_not":false,"summary":null,"term":"MONDO:0014091"}]},"cv_name":"mondo","definition":"Any mitochondrial complex deficiency in which the cause of the disease is a mutation in the ATP5F1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"},{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex V (ATP synthase) deficiency nuclear type 4B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615228","UMLS:C3808899","DOID:0070462","GARD:18667","MEDGEN:815229"],"synonyms":[{"name":"ATP5F1A mitochondrial complex deficiency","type":"exact"},{"name":"MC5DN4B","type":"exact"},{"name":"mitochondrial Complex 5 (ATP synthase) deficiency, ATP5A1 type","type":"related"},{"name":"mitochondrial Complex 5 (ATP synthase) deficiency, nuclear type 4","type":"related"},{"name":"mitochondrial complex V (ATP synthase) deficiency, nuclear type 4","type":"related"},{"name":"mitochondrial complex deficiency caused by mutation in ATP5F1A","type":"exact"}],"termid":"MONDO:0014091","terms_by_termid":{"MONDO:0014091":null},"xrefs":{"Monarch":{"xref_id":"0014091"}}}


id: PBO:0062255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 2 pseudogene","termid":"PBO:0062255"}


id: PBO:0051627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILRUN pseudogene 1","termid":"PBO:0051627"}


id: GO:0050021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinono-1,4-lactone + H2O = L-arabinonate + H+.","definition_xrefs":["EC:3.1.1.15","RHEA:16217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-arabinonolactonase activity","secondary_identifiers":["MetaCyc:L-ARABINONOLACTONASE-RXN","KEGG_REACTION:R02526"],"synonyms":[{"name":"L-arabinono-1,4-lactone lactonohydrolase activity","type":"related"}],"termid":"GO:0050021"}


id: FYPO:0002757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of quinidine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to quinidine","synonyms":[{"name":"resistance to quinidine during mitotic cell cycle","type":"related"},{"name":"resistance to quinidine during vegetative growth","type":"exact"},{"name":"resistant to quinidine","type":"exact"}],"termid":"FYPO:0002757"}


id: MOD:00022
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-methionine.","definition_xrefs":["ChEBI:29983","PubMed:6692818","RESID:AA0013","PubMed:6411710","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine residue","synonyms":[{"name":"(2S)-2-amino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butyric acid","type":"exact"},{"name":"2-azanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"L-(-)-methionine","type":"exact"},{"name":"L-methionine","type":"exact"},{"name":"Met","type":"exact"},{"name":"S-methyl-L-homocysteine","type":"exact"},{"name":"alpha-amino-gamma-methylmercaptobutyric acid","type":"exact"},{"name":"alpha-amino-gamma-methylthiobutyric acid","type":"exact"},{"name":"gamma-methylthio-alpha-aminobutyric acid","type":"exact"}],"termid":"MOD:00022"}


id: PATO:0001522
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in sound by virtue of the bearer's travelling speed in a given medium under specified conditions.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Sound_speed"],"direct_ancestors":[{"relation_name":"is_a","term_name":"speed","termid":"PATO:0000008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sound speed","termid":"PATO:0001522"}


id: GO:1905962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a glutamatergic neuron.","definition_xrefs":["GO_REF:0000086","GOC:TermGenie","PMID:24030726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glutamatergic neuron differentiation","termid":"GO:1905962"}


id: PBO:0091979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf20","termid":"PBO:0091979"}


id: PR:Q9P7Y3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Y3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase assembly factor pkr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.02","synonyms":[{"name":"Spom972h-pkr1","type":"exact"}],"termid":"PR:Q9P7Y3"}


id: PBO:0075319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 pseudogene 1","termid":"PBO:0075319"}


id: PBO:0089051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase with rhodanese domain, unknown specificity","termid":"PBO:0089051"}


id: PR:Q9UT86
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.03","secondary_identifiers":["UniProtKB:Q9UT86"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC343.03","type":"related"},{"name":"Spom972h-ANAPC11","type":"exact"}],"termid":"PR:Q9UT86"}


id: MONDO:0004399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epithelial malignant thymoma (obsolete MONDO:0004399)","termid":"MONDO:0004399","xrefs":{"Monarch":{"xref_id":"0004399"}}}


id: PBO:0081601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 525","termid":"PBO:0081601"}


id: GO:0030382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of sperm mitochondria; the process in which they take on their characteristic morphology; they are flattened, elongated, and arranged circumferentially into a tight helical coil around the tail-dense fibers of the mature sperm.","definition_xrefs":["GOC:mah","GOC:jl","GOC:dph","PMID:8833144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"sperm mitochondrion organization","synonyms":[{"name":"sperm mitochondria organisation","type":"exact"},{"name":"sperm mitochondria organization and biogenesis","type":"related"},{"name":"sperm mitochondrion organization and biogenesis","type":"related"}],"termid":"GO:0030382"}


id: GO:0086030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adrenergic receptor signaling pathway that contributes to a reduction in cardiac muscle contraction. Beta-adrenergic receptor-induced cardiac relaxation is achieved by a GPCR-activated adenylate cyclase generating cAMP; cAMP then activates the cAMP-dependent protein kinase A (PKA), which phosphorylates the sarcoplasmic reticulum (SR) membrane protein PLB. In its non-phosphorylated state, PLB acts as an inhibitor of the ATPase Ca(2+) pump of the cardiac SR (SERCA2a); inhibition of the pump is relieved upon phosphorylation. The pump removes Ca(2+) from the cytoplasm, thereby preventing cytosolic Ca(2+)-dependent activation of contractile proteins, leading to enhanced muscle relaxation.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF","PMID:10571541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process","termid":"GO:0086023"},{"relation_name":"part_of","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating adrenergic receptor signaling pathway involved in cardiac muscle relaxation","synonyms":[{"name":"Gs-coupled adrenergic receptor signaling pathway involved in cardiac muscle relaxation","type":"exact"},{"name":"adrenergic receptor signaling pathway involved in cardiac muscle relaxation","type":"exact"},{"name":"adrenergic receptor signaling pathway involved in cardiac muscle relaxation via activation of AC","type":"related"},{"name":"adrenergic receptor-induced cardiac relaxation","type":"related"}],"termid":"GO:0086030"}


id: GO:0047517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-xylose + [(1->4)-beta-D-xylan](n) = UDP + [(1->4)-beta-D-xylan](n+1).","definition_xrefs":["EC:2.4.2.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"1,4-beta-D-xylan synthase activity","secondary_identifiers":["RHEA:15289","MetaCyc:RXN-9104"],"synonyms":[{"name":"1,4-beta-xylan synthase activity","type":"related"},{"name":"UDP-D-xylose:1,4-beta-D-xylan 4-beta-D-xylosyltransferase activity","type":"related"},{"name":"uridine diphosphoxylose-1,4-beta-xylan xylosyltransferase activity","type":"related"},{"name":"xylan synthase activity","type":"related"},{"name":"xylan synthetase activity","type":"related"}],"termid":"GO:0047517"}


id: MONDO:1011254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive rod-cone degeneration that occurs in dogs due to a mutation in the PDE6A gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy, non-human animal","termid":"MONDO:1012582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone dysplasia, PDE6A-related, dog","secondary_identifiers":["OMIA:001314-9615"],"synonyms":[{"name":"retinal atrophy - rod-cone dysplasia 3, PDE6A-related, dog","type":"related"}],"termid":"MONDO:1011254","xrefs":{"Monarch":{"xref_id":"1011254"}}}


id: GO:0010366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of an ethylene biosynthetic process.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ethylene biosynthetic process","termid":"GO:0010364"},{"relation_name":"is_a","term_name":"negative regulation of sulfur amino acid metabolic process","termid":"GO:0031336"},{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"negatively_regulates","term_name":"ethylene biosynthetic process","termid":"GO:0009693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"negative regulation of ethylene biosynthetic process","termid":"GO:0010366"}


id: GO:0017121
data:
  {"annotated_genes":["SJAG_01470"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72962],"is_not":false,"summary":null,"term":"GO:0017121"}]},"cv_name":"biological_process","definition":"The movement of a population of phospholipid molecules from one leaflet of the plasma membrane bilayer to the opposite leaflet, resulting in loss of lipid asymmetry and surface exposure of phosphatidylserine (PS) and phosphatidylethanolamine (PE).","definition_xrefs":["PMID:20043909","PMID:20302864","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"plasma membrane phospholipid scrambling","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PL scrambling","type":"exact"},{"name":"phospholipid scrambling","type":"related"}],"termid":"GO:0017121","terms_by_termid":{"GO:0017121":null}}


id: MONDO:0100289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vitreoretinal dystrophy characterized by early onset of night blindness, reduced bilateral visual acuity, and typical fundus findings (progressive pigmentary degenerative changes, macular edema, retinoschisis).","definition_xrefs":["Orphanet:53540"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete unclassified primitive or secondary maculopathy (obsolete MONDO:0020244)","termid":"MONDO:0020244"},{"relation_name":"is_a","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"Goldmann-Favre syndrome","secondary_identifiers":["MEDGEN:87387","SCTID:232065000","ICD10CM:H35.5","icd11.foundation:890235941","GARD:10781","UMLS:C0339541"],"synonyms":[{"name":"Favre hyaloideoretinal Degeneration","type":"related"},{"name":"retinoschisis with early nyctalopia","type":"exact"}],"termid":"MONDO:0100289","xrefs":{"Monarch":{"xref_id":"0100289"}}}


id: PBO:0056405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 3","termid":"PBO:0056405"}


id: PBO:0050978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 22","termid":"PBO:0050978"}


id: PATO:0005008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape inhering in a bearer by virtue of the bearer's having dentition characterized by low-crowned teeth. Human teeth are brachydont.","definition_xrefs":["DOI:10.1111/j.1469-185X.2011.00176.x"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydont","termid":"PATO:0005008"}


id: GO:1901644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of tRNA methylation in response to nitrogen starvation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of tRNA methylation in response to nitrogen starvation (obsolete GO:1901644)","synonyms":[{"name":"activation of tRNA methylation in response to nitrogen starvation","type":"narrow"},{"name":"up regulation of tRNA methylation in response to nitrogen starvation","type":"exact"},{"name":"up-regulation of tRNA methylation in response to nitrogen starvation","type":"exact"},{"name":"upregulation of tRNA methylation in response to nitrogen starvation","type":"exact"}],"termid":"GO:1901644"}


id: MONDO:0009635
data:
  {"annotated_genes":["SJAG_03011","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85116,85117],"is_not":false,"summary":null,"term":"MONDO:0009635"}]},"cv_name":"mondo","definition":"Microvillus inclusion disease (MVID) is a very rare, severe, malabsorbative syndrome characterized clinically by protracted or intractable neonatal secretory diarrhea and histologically by inclusion bodies on the intestinal epithelium.","definition_xrefs":["Orphanet:2290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital secretory diarrhea","termid":"MONDO:0045032"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"microvillus inclusion disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200913","NORD:1446","OMIM:251850","SCTID:235729009","UMLS:C0341306","GARD:7039","MEDGEN:137954","DOID:0060775","ICD9:579.8","NANDO:2100255","MedDRA:10068494"],"synonyms":[{"name":"DIAR2","type":"related"},{"name":"Davidson disease","type":"exact"},{"name":"Davidson's disease","type":"related"},{"name":"MVD","type":"exact"},{"name":"MVID","type":"exact"},{"name":"MYO5B secretory diarrhea","type":"exact"},{"name":"MYO5B secretory diarrhoea","type":"exact"},{"name":"congenital familial protracted diarrhea","type":"related"},{"name":"congenital familial protracted diarrhea with enterocyte Brush-border abnormalities","type":"related"},{"name":"congenital familial protracted diarrhea with enterocyte brush-border abnormalities","type":"exact"},{"name":"congenital familial protracted diarrhoea","type":"related"},{"name":"congenital familial protracted diarrhoea with enterocyte Brush-border abnormalities","type":"related"},{"name":"congenital familial protracted diarrhoea with enterocyte brush-border abnormalities","type":"exact"},{"name":"congenital microvillous atrophy","type":"exact"},{"name":"congenital microvillus atrophy","type":"exact"},{"name":"diarrhea 2 with microvillus atrophy","type":"exact"},{"name":"diarrhea 2, with microvillus atrophy","type":"related"},{"name":"diarrhoea 2 with microvillus atrophy","type":"exact"},{"name":"diarrhoea 2, with microvillus atrophy","type":"related"},{"name":"familial enteropathy, microvillus","type":"related"},{"name":"intractable diarrhea of infancy","type":"related"},{"name":"intractable diarrhoea of infancy","type":"related"},{"name":"microvillous inclusion disease","type":"exact"},{"name":"microvillus atrophy, congenital","type":"related"},{"name":"microvillus inclusion disease","type":"exact"},{"name":"secretory diarrhea caused by mutation in MYO5B","type":"exact"},{"name":"secretory diarrhoea caused by mutation in MYO5B","type":"exact"}],"termid":"MONDO:0009635","terms_by_termid":{"MONDO:0009635":null},"xrefs":{"Monarch":{"xref_id":"0009635"}}}


id: GO:0046909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of substances between any membrane of a cell, including the plasma membrane and its regions.","definition_xrefs":["GOC:pr","GOC:ai","PMID:10671554"],"gene_count":0,"genotype_count":0,"name":"obsolete intermembrane transport (obsolete GO:0046909)","termid":"GO:0046909"}


id: MONDO:0035013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic primary orthostatic disorder (obsolete MONDO:0035013)","secondary_identifiers":["Orphanet:521232"],"termid":"MONDO:0035013","xrefs":{"Monarch":{"xref_id":"0035013"}}}


id: PBO:0080409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37C subunit of ESCRT-I","termid":"PBO:0080409"}


id: GO:0002770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of a T cell capable of inhibiting an immune effector process contributing to an immune response.","definition_xrefs":["GOC:add","PMID:15258309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"T cell inhibitory signaling pathway","synonyms":[{"name":"T cell inhibitory signalling pathway","type":"exact"},{"name":"T lymphocyte inhibitory signaling pathway","type":"exact"},{"name":"T-cell inhibitory signaling pathway","type":"exact"},{"name":"T-lymphocyte inhibitory signaling pathway","type":"exact"}],"termid":"GO:0002770"}


id: PBO:0061346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 4","termid":"PBO:0061346"}


id: MONDO:0100158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of presentations resulting from biallelic protein-altering variation in CHRNG. Inactivation of the receptor during early development leads to prenatal hypo-akinesia; subsequent phenotypes are a consequence of this hypo-akinesia and are thought to be dependent upon timing and severity of the anomaly at the neuromuscular junction. A range of phenotypes varying in severity (including both lethal and non-lethal presentations) have been reported, but typically include joint contractures, pterygia, dysmorphic features, vertebral and thoracic anomalies, and additional variable abnormalities. There are no clear genotype-phenotype correlations between the lethal and non-lethal presentations of this spectrum; both inter- and intra-familial variability have been reported, with the same variants being observed in both lethal and non-lethal cases.","definition_xrefs":["PMID:16826531","PMID:22167768","PMID:16826520","PMID:30868735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple pterygium syndrome","termid":"MONDO:0017415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRNG-associated hypo-akinesia disorder of prenatal onset","termid":"MONDO:0100158","xrefs":{"Monarch":{"xref_id":"0100158"}}}


id: GO:0140893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + amino acid(out) + Na+(out) = H+(out) + amino acid(in) + Na+(in).","definition_xrefs":["PMID:34704597","PMID:11698233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"neutral amino acid, sodium:proton antiporter activity","secondary_identifiers":["TC:2.A.18.6.8"],"synonyms":[{"name":"amino acid-coupled Na+/H+ exchanger activity","type":"exact"}],"termid":"GO:0140893"}


id: PBO:0091203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp","termid":"PBO:0091203"}


id: MONDO:0004974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neuroendocrine neoplasm of the sympathetic nervous system that secretes catecholamines. It arises from the chromaffin cells of the adrenal medulla. Clinical presentation includes headaches, palpitations, chest and abdominal pain, hypertension, fever, and tremor. Microscopically, a characteristic nesting (zellballen) growth pattern is usually seen. Other growth patterns including trabecular pattern may also be present.","definition_xrefs":["NCIT:C3326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sympathetic paraganglioma","termid":"MONDO:0021072"},{"relation_name":"is_a","term_name":"adrenal medulla neoplasm","termid":"MONDO:0021237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal gland pheochromocytoma","secondary_identifiers":["ICDO:8700/0","DOID:0050892","MEDGEN:1636437","NANDO:2200078","EFO:0000239","UMLS:C4551683"],"synonyms":[{"name":"Intraadrenal paraganglioma","type":"exact"},{"name":"PCC","type":"exact"},{"name":"adrenal gland Chromaffinoma","type":"exact"},{"name":"adrenal gland chromaffin paraganglioma","type":"exact"},{"name":"adrenal gland paraganglioma","type":"exact"},{"name":"adrenal gland pheochromocytoma","type":"exact"},{"name":"adrenal medullary paraganglioma","type":"exact"},{"name":"adrenal medullary pheochromocytoma","type":"exact"},{"name":"adrenal pheochromocytoma","type":"exact"},{"name":"chromaffin paraganglioma of the adrenal gland","type":"exact"},{"name":"pheochromocytoma","type":"broad"},{"name":"pheochromocytoma (adrenal)","type":"exact"}],"termid":"MONDO:0004974","xrefs":{"Monarch":{"xref_id":"0004974"}}}


id: PBO:0085032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-canonical poly(A) polymerase; involved in nuclear RNA degradation as a component of the TRAMP complex; catalyzes polyadenylation of hypomodified tRNAs, and snoRNA and rRNA precursors; overlapping but non-redundant functions with Pap2p","termid":"PBO:0085032"}


id: FYPO:0000587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000121","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of sporulation","synonyms":[{"name":"delayed onset of ascospore formation","type":"exact"},{"name":"delayed sporulation","type":"exact"},{"name":"sporulation: delayed","type":"related"}],"termid":"FYPO:0000587"}


id: PBO:0076464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAMALIN antisense RNA 1","termid":"PBO:0076464"}


id: GO:1990321
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXII) chains; type XXII collagen triple helices acts as a cell adhesion ligand for skin epithelial cells and fibroblasts.","definition_xrefs":["GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XXII trimer","termid":"GO:1990321"}


id: MONDO:0032605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 66","secondary_identifiers":["MEDGEN:1648460","OMIM:618221","DOID:0081227","GARD:22579","UMLS:C4748732"],"synonyms":[{"name":"MENTAL RETARDATION, AUTOSOMAL RECESSIVE 66","type":"related"},{"name":"MRT66","type":"related"},{"name":"intellectual developmental disorder, autosomal recessive 66","type":"exact"}],"termid":"MONDO:0032605","xrefs":{"Monarch":{"xref_id":"0032605"}}}


id: SO:0000668
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against an EST sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST_match","synonyms":[{"name":"EST match","type":"exact"}],"termid":"SO:0000668"}


id: MONDO:0013452
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86705],"is_not":false,"summary":null,"term":"MONDO:0013452"}]},"cv_name":"mondo","definition":"Multisystemic smooth muscle dysfunction syndrome is a disease in which the activity of smooth muscle throughout the body is impaired. This leads to widespread problems including blood vessel abnormalities, a decreased response of the pupils to light, a weak bladder, and weakened contractions of the muscles used for the digestion of food (hypo peristalsis). A certain mutation in the ACTA2 gene has been shown to cause this condition insome individuals.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"multisystemic smooth muscle dysfunction syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462551","GARD:12811","Orphanet:404463","UMLS:C3151201","OMIM:613834"],"synonyms":[{"name":"congenital mydriasis, patent ductus arteriosus, thoracic aortic aneurysm, and vasculopathy","type":"related"},{"name":"multisystemic smooth muscle dysfunction syndrome","type":"exact"},{"name":"mydriasis, congenital, with patent ductus arteriosus, thoracic aortic aneurysm, and vasculopathy","type":"related"}],"termid":"MONDO:0013452","terms_by_termid":{"MONDO:0013452":null},"xrefs":{"Monarch":{"xref_id":"0013452"}}}


id: MONDO:0032603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postaxial polydactyly","termid":"MONDO:0020927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, postaxial, type A9","secondary_identifiers":["MEDGEN:1648428","UMLS:C4748721","GARD:18177","OMIM:618219"],"synonyms":[{"name":"PAPA9","type":"related"},{"name":"POLYDACTYLY, POSTAXIAL, TYPE A9","type":"related"}],"termid":"MONDO:0032603","xrefs":{"Monarch":{"xref_id":"0032603"}}}


id: GO:2000036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stem cell population maintenance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stem cell population maintenance","synonyms":[{"name":"regulation of maintenance of pluripotency","type":"related"}],"termid":"GO:2000036"}


id: PBO:0000580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk14 (predicted)","termid":"PBO:0000580"}


id: PBO:0065908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab9 effector protein with kelch motifs pseudogene 1","termid":"PBO:0065908"}


id: PBO:0016588
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SIT4","termid":"PBO:0016588"}


id: PBO:0113802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human KIN ortholog, implicated in DNA metabolism and RNA processing","termid":"PBO:0113802"}


id: GO:1990868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemokine stimulus.","definition_xrefs":["PMID:11113082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chemokine","termid":"GO:1990868"}


id: GO:0051779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin 12-aldehyde + NADPH + H+ + O2 = gibberellin 12 + NADP+ + H2O. This is the third of three successive reactions resulting in the oxidation of ent-kaurenoate (ent-kaurenoic acid) to gibberellin 12 (GA12).","definition_xrefs":["MetaCyc:RXN1F-161","EC:1.14.13.79"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin 12-aldehyde oxidase activity (obsolete GO:0051779)","synonyms":[{"name":"GA12-aldehyde oxidase activity","type":"exact"}],"termid":"GO:0051779"}


id: PBO:0047452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCH and mu domain containing endocytic adaptor 2","termid":"PBO:0047452"}


id: GO:0008266
data:
  {"annotated_genes":["SJAG_03283","SJAG_03214","SJAG_03954","SJAG_04427","SJAG_01650","SJAG_01327","SJAG_03876","SJAG_04880","SJAG_05240","SJAG_01222","SJAG_04271","SJAG_02469","SJAG_03460","SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70317,72774,74452,78751,89277,94953,95418,95620,96910,106148,109727,112681,114732,116201],"is_not":false,"summary":null,"term":"GO:0008266"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of uracil residues in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-pyrimidine tract binding","termid":"GO:0008187"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_01222":null,"SJAG_01327":null,"SJAG_01650":null,"SJAG_02469":null,"SJAG_03214":null,"SJAG_03283":null,"SJAG_03460":null,"SJAG_03876":null,"SJAG_03954":null,"SJAG_04271":null,"SJAG_04427":null,"SJAG_04880":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"poly(U) RNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(U) binding","type":"exact"}],"termid":"GO:0008266","terms_by_termid":{"GO:0008266":null}}


id: PBO:0064400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARN like ribonuclease domain containing exonuclease 1","termid":"PBO:0064400"}


id: PBO:0079452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUSC2 pseudogene 2","termid":"PBO:0079452"}


id: MONDO:0014401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tall stature-scoliosis-macrodactyly of the great toes syndrome is a rare, genetic, overgrowth or tall stature syndrome with skeletal involvement characterized by early and proportional overgrowth, osteopenia, lumbar scoliosis, arachnodactyly of the hands and feet, macrodactyly of the hallux, coxa valga with epiphyseal dysplasia of the femoral capital epiphyses and susceptibility to slipped capital femoral epiphysis.","definition_xrefs":["Orphanet:329191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tall stature-scoliosis-macrodactyly of the great toes syndrome","secondary_identifiers":["DOID:0070316","GARD:17495","MEDGEN:863127","OMIM:615923","UMLS:C4014690"],"synonyms":[{"name":"ECDM","type":"related"},{"name":"Miura type epiphyseal chondrodysplasia","type":"related"},{"name":"epiphyseal chondrodysplasia, MIURA type","type":"related"},{"name":"tall stature-scoliosis-macrodactyly of the halluces syndrome","type":"exact"}],"termid":"MONDO:0014401","xrefs":{"Monarch":{"xref_id":"0014401"}}}


id: PBO:0072531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 61","termid":"PBO:0072531"}


id: PBO:0044353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 40","termid":"PBO:0044353"}


id: PR:Q9P3V6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.04 gene.","definition_xrefs":["UniProtKB:Q9P3V6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C1348.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.04","synonyms":[{"name":"Spom972h-SPBC1348.04","type":"exact"}],"termid":"PR:Q9P3V6"}


id: PBO:0065417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 4","termid":"PBO:0065417"}


id: PBO:0051345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-28","termid":"PBO:0051345"}


id: PBO:0030762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_mercury_ion","termid":"PBO:0030762"}


id: GO:0030847
data:
  {"annotated_genes":["SJAG_04006","SJAG_03179","SJAG_04527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97048,101969,107259],"is_not":false,"summary":null,"term":"GO:0030847"}]},"cv_name":"biological_process","definition":"The process in which transcription of nonpolyadenylated RNA polymerase II transcripts is terminated; coupled to the maturation of the RNA 3'-end.","definition_xrefs":["PMID:27371117","GOC:txnOH","PMID:18679429","PMID:12944462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"termination of RNA polymerase II transcription","termid":"GO:0006369"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03179":null,"SJAG_04006":null,"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"termination of RNA polymerase II transcription, exosome-dependent","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"termination of RNA polymerase II transcription, poly(A)-independent","type":"exact"},{"name":"transcription termination from Pol II promoter, RNA polymerase(A)-independent","type":"exact"},{"name":"transcription termination from Pol II promoter, poly(A)-independent","type":"exact"}],"termid":"GO:0030847","terms_by_termid":{"GO:0030847":null}}


id: MONDO:0021532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fibroma that involves the prostate gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroma","termid":"MONDO:0005167"},{"relation_name":"is_a","term_name":"benign neoplasm of prostate","termid":"MONDO:0021510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroma of prostate","secondary_identifiers":["NCIT:C3972","MEDGEN:75709","UMLS:C0268885","SCTID:47014000","ICD9:600.20"],"synonyms":[{"name":"fibroma of the prostate","type":"exact"},{"name":"prostate fibroma","type":"exact"},{"name":"prostate gland fibroma","type":"exact"}],"termid":"MONDO:0021532","xrefs":{"Monarch":{"xref_id":"0021532"}}}


id: GO:0018929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methyl fluoride, fluorine-substituted methane, a gaseous halogenated hydrocarbon that has been investigated as an inhibitor of methanotrophy and nitrification in soils.","definition_xrefs":["UM-BBD_pathwayID:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"},{"relation_name":"is_a","term_name":"organofluorine metabolic process","termid":"GO:0090346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methyl fluoride metabolic process","synonyms":[{"name":"methyl fluoride metabolism","type":"exact"}],"termid":"GO:0018929"}


id: GO:0036245
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105025],"is_not":false,"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a menadione stimulus. Menadione (also called vitamin K3) is a naphthoquinone having a methyl substituent at the 2-position.","definition_xrefs":["GOC:al","Wikipedia:Menadione"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to vitamin K","termid":"GO:0071307"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to menadione","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to vitamin K3","type":"exact"}],"termid":"GO:0036245","terms_by_termid":{"GO:0036245":null}}


id: GO:0008426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of protein kinase C, an enzyme which phosphorylates a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase inhibitor activity","termid":"GO:0030291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772","GO:0140678","GO:0004857"],"is_obsolete":false,"name":"protein kinase C inhibitor activity","secondary_identifiers":["GO:0004863"],"synonyms":[{"name":"PKC inhibitor activity","type":"exact"},{"name":"diacylglycerol-activated phospholipid-dependent PKC inhibitor activity","type":"exact"},{"name":"diacylglycerol-activated phospholipid-dependent protein kinase C inhibitor activity","type":"exact"}],"termid":"GO:0008426"}


id: PATO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having a horizontal surface without a slope, tilt, or curvature.","definition_xrefs":["web:http://www.merriam-webster.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flat","synonyms":[{"name":"plate-like","type":"related"}],"termid":"PATO:0000407"}


id: PBO:0041859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 5","termid":"PBO:0041859"}


id: PBO:0071232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 73","termid":"PBO:0071232"}


id: GO:0034843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutaryl-CoA + OH- = 2-oxoglutarate + CoASH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-oxoglutaryl-CoA thioesterase activity (obsolete GO:0034843)","termid":"GO:0034843"}


id: PBO:0083409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YLR366W","termid":"PBO:0083409"}


id: FYPO:0002927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and a polyadenylated RNA (poly(A)RNA) is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-RNA interaction","termid":"FYPO:0002134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased poly(A) RNA binding","synonyms":[{"name":"decreased polyA RNA binding","type":"exact"},{"name":"decreased polyadenylated RNA binding","type":"exact"},{"name":"decreased protein-poly(A) RNA interaction","type":"exact"},{"name":"reduced poly(A) RNA binding","type":"exact"}],"termid":"FYPO:0002927"}


id: GO:1905446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial ATP synthesis coupled electron transport.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bc","PMID:23707074","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"regulates","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of mitochondrial ATP synthesis coupled electron transport","synonyms":[{"name":"regulation of mitochondrial electron transport","type":"broad"},{"name":"regulation of organelle ATP synthesis coupled electron transport","type":"broad"}],"termid":"GO:1905446"}


id: MONDO:0014120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A13","secondary_identifiers":["MEDGEN:815372","UMLS:C3809042","DOID:0111238","GARD:15938","OMIM:615287"],"synonyms":[{"name":"MDDGA13","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, B3Gnt1-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 13","type":"related"}],"termid":"MONDO:0014120","xrefs":{"Monarch":{"xref_id":"0014120"}}}


id: PBO:0049224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 6","termid":"PBO:0049224"}


id: RO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connecting_branch_of","termid":"RO:0002252"}


id: GO:0021724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior raphe nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:cvs","GOC:cjm","PMID:19003874","GOC:curators","ZFA:0000366","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior raphe nucleus development","synonyms":[{"name":"inferior central nucleus development","type":"broad"},{"name":"posterior raphe nucleus development","type":"broad"}],"termid":"GO:0021724"}


id: PBO:0061175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 5-1","termid":"PBO:0061175"}


id: MONDO:0011391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megalencephalic leukoencephalopathy with subcortical cysts (MLC) is a form of leukodystrophy that is characterized by infantile-onset macrocephaly, often with mild neurologic signs at presentation (such as mild motor delay), which worsen with time, leading to poor ambulation, falls, ataxia, spasticity, increasing seizures and cognitive decline. Brain magnetic resonance imaging reveals diffusely abnormal and mildly swollen white matter as well as subcortical cysts in the anterior temporal and frontoparietal regions.","definition_xrefs":["Orphanet:2478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukoencephalopathy, megalencephalic","termid":"MONDO:0000137"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"megalencephalic leukoencephalopathy with subcortical cysts","secondary_identifiers":["DOID:0080315","NANDO:2200837","UMLS:C1858854","SCTID:703536004","GARD:3445","MEDGEN:347006","MESH:C536141","NANDO:1200950"],"synonyms":[{"name":"MLC","type":"exact"},{"name":"MLC1","type":"related"},{"name":"Vacuolating megalencephalic leukoencephalopathy with subcortical cysts","type":"exact"},{"name":"Van der Knaap syndrome","type":"exact"},{"name":"megalencephalic leukodystrophy","type":"exact"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts 1","type":"related"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts type 1","type":"exact"},{"name":"megalencephaly-cystic leukodystrophy","type":"related"},{"name":"megalencephaly-cystic leukodystrophy syndrome","type":"exact"}],"termid":"MONDO:0011391","xrefs":{"Monarch":{"xref_id":"0011391"}}}


id: PBO:0079459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-golgi network vesicle protein 23 homolog A","termid":"PBO:0079459"}


id: FYPO:0007431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mutations occur at a higher or lower rate than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered mutation rate","synonyms":[{"name":"abnormal mutation rate","type":"exact"},{"name":"altered mutation rate during mitotic cell cycle","type":"related"},{"name":"altered mutation rate during vegetative growth","type":"exact"}],"termid":"FYPO:0007431"}


id: MONDO:0015390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Proboscis lateralis (PL) is a rare congenital facial abnormality characterized by failed development of the external nose on one side that is replaced by a tubular structure composed of skin and soft tissue usually attached at the inner canthus of the eye and therefore often associated with maldevelopment of the nasal cavity or paranasal sinuses of the affected side. PL is also associated with other craniofacial abnormalities such as orbital anomalies, cleft lip/palate, frontal encephalocele and holoprosencephaly.","definition_xrefs":["Orphanet:141099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proboscis lateralis","secondary_identifiers":["icd11.foundation:646148612","UMLS:C4274985","GARD:19947","SCTID:715828006","MEDGEN:900031"],"synonyms":[{"name":"congenital tubular nose","type":"exact"}],"termid":"MONDO:0015390","xrefs":{"Monarch":{"xref_id":"0015390"}}}


id: PR:Q9UQX0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A superoxide dismutase [Mn], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11404:SF5","PRO:DNx","OMA:SCHPO01332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase [Mn], mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.01","secondary_identifiers":["UniProtKB:Q9UQX0"],"synonyms":[{"name":"Spom972h-SOD2","type":"exact"}],"termid":"PR:Q9UQX0"}


id: GO:0005558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete minor histocompatibility antigen (obsolete GO:0005558)","synonyms":[{"name":"minor histocompatibility antigen","type":"exact"}],"termid":"GO:0005558"}


id: GO:0051432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH1 protein domain, present in Bcl-2 family members. Proteins that act as inhibitors of apoptosis harbour at least three BH domains: BH1, BH2 and BH3; the BH1 and BH2 domains are found in all death antagonists of the Bcl-2 family but only in one class of death agonists.","definition_xrefs":["PMID:9020082","Prosite:PS01080","PMID:11048732","PMID:12133724","PMID:9704409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"BH1 domain binding","termid":"GO:0051432"}


id: PBO:0013096
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sty1 iNteracting stress Response protein","termid":"PBO:0013096"}


id: GO:2000865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estradiol secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of estradiol secretion","termid":"GO:2000864"},{"relation_name":"negatively_regulates","term_name":"estradiol secretion","termid":"GO:0035938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of estradiol secretion","synonyms":[{"name":"negative regulation of oestradiol secretion","type":"exact"}],"termid":"GO:2000865"}


id: MONDO:0009310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any chronic granulomatous disease in which the cause of the disease is a mutation in the NCF2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 2","secondary_identifiers":["MEDGEN:383869","OMIM:233710","NANDO:2201282","MESH:C565531","UMLS:C1856245","DOID:0070191","GARD:15177"],"synonyms":[{"name":"CDG2","type":"related"},{"name":"CGD, autosomal recessive cytochrome B-positive, type 2","type":"related"},{"name":"NCF2 chronic granulomatous disease","type":"exact"},{"name":"Ncf2, deficiency of","type":"related"},{"name":"P67-PHOX, deficiency of","type":"related"},{"name":"chronic granulomatous disease 2, autosomal recessive","type":"exact"},{"name":"chronic granulomatous disease caused by mutation in NCF2","type":"exact"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-POSITIVE, type II","type":"related"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 2","type":"exact"},{"name":"granulomatous disease, chronic, due to Ncf2 deficiency","type":"related"},{"name":"neutrophil cytosol Factor 2, deficiency of","type":"related"}],"termid":"MONDO:0009310","xrefs":{"Monarch":{"xref_id":"0009310"}}}


id: GO:0098584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle of a host cell, some 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle","termid":"GO:0044161"},{"relation_name":"part_of","term_name":"host cell synapse","termid":"GO:0044221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell synaptic vesicle","termid":"GO:0098584"}


id: GO:1901902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tyrocidine.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:9352938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tyrocidine metabolic process","synonyms":[{"name":"tyrocidine metabolism","type":"exact"}],"termid":"GO:1901902"}


id: PBO:0040978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein like","termid":"PBO:0040978"}


id: PBO:0058397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4769","termid":"PBO:0058397"}


id: PBO:0073400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 3","termid":"PBO:0073400"}


id: MONDO:0018442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acitretin/Etretinate embryopathy is a teratogenic disorder due to acitretin or etretinate exposure during the first trimester of pregnancy, carrying a risk of fetal malformations of approximately 20%, including central nervous system, craniofacial, ear, thymic, cardiac and limb anomalies.","definition_xrefs":["Orphanet:40366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acitretin/etretinate embryopathy","secondary_identifiers":["MEDGEN:1386157","MESH:C538169","GARD:18827","UMLS:C4510941","SCTID:725287006"],"synonyms":[{"name":"Acitretine embryofetopathy","type":"related"},{"name":"acitretin embryofetopathy","type":"related"},{"name":"acitretin embryopathy","type":"related"},{"name":"fetal acitretin syndrome","type":"related"},{"name":"fetal acitretin/etretinate syndrome","type":"exact"},{"name":"foetal acitretin syndrome","type":"related"},{"name":"foetal acitretin/etretinate syndrome","type":"exact"},{"name":"retinoid embryopathy","type":"exact"}],"termid":"MONDO:0018442","xrefs":{"Monarch":{"xref_id":"0018442"}}}


id: PBO:0062898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxoeicosanoid receptor 1","termid":"PBO:0062898"}


id: MONDO:0019150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Familial restrictive cardiomyopathy is a genetic form of heart disease, in which the heart muscle is stiff and cannot fully relax after each contraction. Impaired muscle relaxation causes blood to back up in the atria and lungs, which reduces the amount of blood in the ventricles.","gene_count":0,"genotype_count":0,"name":"obsolete familial isolated restrictive cardiomyopathy (obsolete MONDO:0019150)","secondary_identifiers":["Orphanet:75249"],"synonyms":[{"name":"familial or idiopathic restrictive cardiomyopathy","type":"exact"}],"termid":"MONDO:0019150","xrefs":{"Monarch":{"xref_id":"0019150"}}}


id: GO:0046188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methane, a colorless, odorless, flammable gas with the formula CH4. It is the simplest of the alkanes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methane metabolic process","termid":"GO:0015947"},{"relation_name":"is_a","term_name":"alkane catabolic process","termid":"GO:0043448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methane catabolic process","synonyms":[{"name":"methane breakdown","type":"exact"},{"name":"methane catabolism","type":"exact"},{"name":"methane degradation","type":"exact"}],"termid":"GO:0046188"}


id: PBO:0045096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX6 antisense RNA 1","termid":"PBO:0045096"}


id: PBO:0084813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; null mutant has a respiratory growth defect and displays reduced peroxide-induced mitochondrial ROS; partially overlaps the verified gene MRPL51/YPR100W","termid":"PBO:0084813"}


id: PBO:0091745
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPBC18H10.16 was previously designated as can1","termid":"PBO:0091745"}


id: MONDO:0005167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm arising from the fibrous tissue. It is characterized by the presence of spindle-shaped fibroblasts.","definition_xrefs":["NCIT:C3041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblastic neoplasm","termid":"MONDO:0006209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroma","secondary_identifiers":["SCTID:424568000","UMLS:C0016045","DOID:0050871","ICD9:215.9","MESH:D005350","ICDO:8810/0","EFO:0002424","MEDGEN:42016"],"synonyms":[{"name":"fibroma","type":"exact"},{"name":"fibroma, benign","type":"exact"}],"termid":"MONDO:0005167","xrefs":{"Monarch":{"xref_id":"0005167"}}}


id: PBO:0060099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 46","termid":"PBO:0060099"}


id: MONDO:0007975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"meralgia paresthetica","termid":"MONDO:0023757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"meralgia paraesthetica, familial","secondary_identifiers":["UMLS:C1835026","OMIM:156220","MESH:C563590","MEDGEN:322555"],"synonyms":[{"name":"meralgia paraesthetica, familial","type":"exact"}],"termid":"MONDO:0007975","xrefs":{"Monarch":{"xref_id":"0007975"}}}


id: MONDO:0011128
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86925,86926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032751"}]},"cv_name":"mondo","definition":"Sheldon-Hall syndrome (SHS) is a rare multiple congenital contracture syndrome characterized by contractures of the distal joints of the limbs, triangular face, downslanting palpebral fissures, small mouth, and high arched palate.","definition_xrefs":["Orphanet:1147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"Sheldon-hall syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1834523","MEDGEN:320374","DOID:0111599","GARD:16556","icd11.foundation:1206883656"],"synonyms":[{"name":"DA2B","type":"exact"},{"name":"Freeman Sheldon syndrome, variant","type":"related"},{"name":"Freeman Sheldon variant","type":"related"},{"name":"Freeman-Sheldon syndrome variant","type":"exact"},{"name":"Sheldon-Hall syndrome","type":"exact"},{"name":"arthrogryposis multiplex congenita distal type 2B","type":"related"},{"name":"arthrogryposis multiplex congenita distal type II with craniofacial abnormalities","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type 2B","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type II, with craniofacial abnormalities","type":"related"},{"name":"arthrogryposis, distal, type 2B","type":"exact"},{"name":"distal arthrogryposis type 2B","type":"exact"}],"termid":"MONDO:0011128","terms_by_termid":{"MONDO:0032751":null},"xrefs":{"Monarch":{"xref_id":"0011128"}}}


id: PR:Q9Y804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Fanconi-associated nuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi-associated nuclease 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.06c","secondary_identifiers":["UniProtKB:Q9Y804"],"synonyms":[{"name":"Spom972h-FAN1","type":"exact"}],"termid":"PR:Q9Y804"}


id: PBO:0063016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 4","termid":"PBO:0063016"}


id: MONDO:0019988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pauci-immune glomerulonephritis (GN) with antineutrophil cytoplasmic antibodies (ANCA) is a form of rapidly progressive GN comprising about 90% of pauci-immune glomerulonephritis, and associated with the presence of circulating ANCA (mostly directed against proteinase-3 (PR3) and myeloperoxidase (MPO)). Patients usually present with hematuria and rapidly declining renal function, often leading to dialysis within weeks without treatment. Cutaneous, pulmonary, musculoskeletal and nervous involvement may be observed in case of systemic disease, and the correlation between ANCA titer and disease activity has been demonstrated.","definition_xrefs":["Orphanet:97563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pauci-immune glomerulonephritis","termid":"MONDO:0019641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pauci-immune glomerulonephritis with ANCA","secondary_identifiers":["MEDGEN:1843351","UMLS:C5680254","GARD:19379"],"synonyms":[{"name":"pauci-immune glomerulonephritis with antineutrophil cytoplasmic antibody","type":"exact"}],"termid":"MONDO:0019988","xrefs":{"Monarch":{"xref_id":"0019988"}}}


id: MONDO:0011918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anxiety disorder","termid":"MONDO:0005618"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anxiety","secondary_identifiers":["UMLS:C0003467","icd11.foundation:2027043655","MESH:D001007","MEDGEN:1613","OMIM:607834"],"synonyms":[{"name":"anxiety","type":"exact"},{"name":"anxiety-related personality traits","type":"exact"},{"name":"harm avoidance","type":"related"}],"termid":"MONDO:0011918","xrefs":{"Monarch":{"xref_id":"0011918"}}}


id: GO:0031113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microtubule polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule polymerization or depolymerization","termid":"GO:0031110"},{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"microtubule polymerization","termid":"GO:0046785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"regulation of microtubule polymerization","termid":"GO:0031113"}


id: PBO:0059807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 33","termid":"PBO:0059807"}


id: PBO:0004428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex IV assembly protein Cox20 (predicted)","termid":"PBO:0004428"}


id: PBO:0055341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2769","termid":"PBO:0055341"}


id: PBO:0051114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-69-2","termid":"PBO:0051114"}


id: PBO:0068956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 200, pseudogene","termid":"PBO:0068956"}


id: MONDO:0014590
data:
  {"annotated_genes":["SJAG_00826"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85050],"is_not":false,"summary":null,"term":"MONDO:0014590"}]},"cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the SNAP25 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00826":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616330","GARD:16091","DOID:0110683","MEDGEN:906793","UMLS:C4225364"],"synonyms":[{"name":"CMS18","type":"exact"},{"name":"SNAP25 congenital myasthenic syndrome","type":"exact"},{"name":"SNAP25-DEE","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in SNAP25","type":"exact"},{"name":"congenital myasthenic syndrome type 18","type":"exact"},{"name":"myasthenic syndrome, congenital, 18","type":"exact"},{"name":"myasthenic syndrome, congenital, 18, with intellectual disability and ataxia","type":"exact"},{"name":"myasthenic syndrome, congenital, type 18","type":"exact"}],"termid":"MONDO:0014590","terms_by_termid":{"MONDO:0014590":null},"xrefs":{"Monarch":{"xref_id":"0014590"}}}


id: SO:0001042
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The nucleotide sequence of a virus that infects bacteria.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_sequence","termid":"SO:0001041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phage_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Bacteriophage"],"synonyms":[{"name":"bacteriophage","type":"exact"},{"name":"phage","type":"exact"},{"name":"phage sequence","type":"exact"}],"termid":"SO:0001042"}


id: FYECO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which potassium nitrate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ potassium nitrate","synonyms":[{"name":"+ KNO3","type":"exact"}],"termid":"FYECO:0000459"}


id: PBO:0031779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_endocytosis_during_vegetative_growth","termid":"PBO:0031779"}


id: MONDO:0001406
data:
  {"annotated_genes":["SJAG_02398","SJAG_01671","SJAG_01111","SJAG_01895","SJAG_03920","SJAG_03163","SJAG_00260","SJAG_04213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[86819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[86729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[85432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[85641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[86965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032771"},{"annotations":[87109,87108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm arising from a peripheral nerve or the perineural sheaths.","definition_xrefs":["NCIT:C3321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"},{"relation_name":"is_a","term_name":"nervous system neoplasm","termid":"MONDO:0021248"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01111":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03163":null,"SJAG_03920":null,"SJAG_04213":null},"genotype_count":0,"is_obsolete":false,"name":"peripheral nervous system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:45817","ONCOTREE:PNS","ICD9:239.2","UMLS:C0031118","DOID:1192","MESH:D010524","SCTID:126980002","EFO:0002431"],"synonyms":[{"name":"CNS-excluded nervous sys. cancer","type":"narrow"},{"name":"PNS neoplasm","type":"exact"},{"name":"PNS neoplasms","type":"exact"},{"name":"PNS tumor","type":"exact"},{"name":"PNS tumour","type":"exact"},{"name":"neoplasm of PNS","type":"exact"},{"name":"neoplasm of peripheral nerve","type":"exact"},{"name":"neoplasm of peripheral nervous system","type":"exact"},{"name":"neoplasm of the PNS","type":"exact"},{"name":"neoplasm of the peripheral nerve","type":"exact"},{"name":"neoplasm of the peripheral nervous system","type":"exact"},{"name":"neoplasms, PNS","type":"exact"},{"name":"neoplasms, peripheral nervous system","type":"exact"},{"name":"nerve sheath neoplasm","type":"narrow"},{"name":"nerve sheath tumors","type":"narrow"},{"name":"nerve sheath tumours","type":"narrow"},{"name":"peripheral nerve neoplasm","type":"exact"},{"name":"peripheral nerve tumor","type":"exact"},{"name":"peripheral nerve tumour","type":"exact"},{"name":"peripheral nervous system neoplasm","type":"exact"},{"name":"peripheral nervous system neoplasm (disease)","type":"exact"},{"name":"peripheral nervous system tumor","type":"exact"},{"name":"peripheral nervous system tumour","type":"exact"},{"name":"tumor of PNS","type":"exact"},{"name":"tumor of peripheral nerve","type":"exact"},{"name":"tumor of peripheral nervous system","type":"exact"},{"name":"tumor of the PNS","type":"exact"},{"name":"tumor of the peripheral nerve","type":"exact"},{"name":"tumor of the peripheral nervous system","type":"exact"},{"name":"tumour of PNS","type":"exact"},{"name":"tumour of peripheral nerve","type":"exact"},{"name":"tumour of peripheral nervous system","type":"exact"},{"name":"tumour of the PNS","type":"exact"},{"name":"tumour of the peripheral nerve","type":"exact"},{"name":"tumour of the peripheral nervous system","type":"exact"}],"termid":"MONDO:0001406","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null,"MONDO:0024517":null,"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0001406"}}}


id: MONDO:0005466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sleep disorder characterized by excessive sleepiness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypersomnia","secondary_identifiers":["UMLS:C0917799","MEDGEN:214588","SCTID:77692006","NCIT:C78346","EFO:0005246","HP:0100786","ICD9:780.54"],"synonyms":[{"name":"hypersomnia","type":"exact"},{"name":"hypersomnia (disease)","type":"exact"}],"termid":"MONDO:0005466","xrefs":{"Monarch":{"xref_id":"0005466"}}}


id: GO:1902830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spinal cord association neuron differentiation.","definition_xrefs":["GOC:mr","GO_REF:0000058","GOC:TermGenie","PMID:21730158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of spinal cord association neuron differentiation","termid":"GO:1902829"},{"relation_name":"negatively_regulates","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spinal cord association neuron differentiation","synonyms":[{"name":"down regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"downregulation of spinal cord association neuron differentiation","type":"exact"},{"name":"downregulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"inhibition of spinal cord association neuron differentiation","type":"narrow"},{"name":"inhibition of spinal cord dorsal interneuron differentiation","type":"narrow"},{"name":"negative regulation of spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:1902830"}


id: MONDO:0001609
data:
  {"annotated_genes":["SJAG_02208","SJAG_03889","SJAG_01798","SJAG_01759","SJAG_03684","SJAG_02330","SJAG_03089","SJAG_01732","SJAG_02453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014118"},{"annotations":[85780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[86035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957809"},{"annotations":[85894,85895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958017"},{"annotations":[86488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032899"},{"annotations":[86582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011405"},{"annotations":[85505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012559"},{"annotations":[86427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010294"}]},"cv_name":"mondo","definition":"A decrease in the number of mature granulocytes (neutrophils, eosinophils, and basophils) in the peripheral blood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukopenia","termid":"MONDO:0003785"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_01759":null,"SJAG_01798":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02453":null,"SJAG_03089":null,"SJAG_03684":null,"SJAG_03889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"agranulocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1913706366","UMLS:C0001824","DOID:12987","ICD9:288.8","ICD10WHO:D70","MEDGEN:7932","MESH:D000380","ICD10CM:D70","SCTID:417672002","NCIT:C2863"],"synonyms":[{"name":"Granulocytopenic disorder","type":"exact"},{"name":"Granulopenia","type":"exact"},{"name":"granulocytopenia","type":"exact"}],"termid":"MONDO:0001609","terms_by_termid":{"MONDO:0010294":null,"MONDO:0011405":null,"MONDO:0011997":null,"MONDO:0012559":null,"MONDO:0014118":null,"MONDO:0032899":null,"MONDO:0957809":null,"MONDO:0958017":null},"xrefs":{"Monarch":{"xref_id":"0001609"}}}


id: GO:0008239
data:
  {"annotated_genes":["SJAG_02565"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70043],"is_not":false,"summary":null,"term":"GO:0008239"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02565":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016787","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"dipeptidyl-peptidase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0008239","terms_by_termid":{"GO:0008239":null}}


id: GO:1904687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic spindle disassembly.","definition_xrefs":["GOC:TermGenie","PMID:25963819","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic spindle organization","termid":"GO:0110028"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle disassembly","termid":"GO:1904686"},{"relation_name":"positively_regulates","term_name":"mitotic spindle disassembly","termid":"GO:0051228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"positive regulation of mitotic spindle disassembly","synonyms":[{"name":"activation of mitotic spindle breakdown","type":"narrow"},{"name":"activation of mitotic spindle catabolism","type":"narrow"},{"name":"activation of mitotic spindle degradation","type":"narrow"},{"name":"activation of mitotic spindle disassembly","type":"narrow"},{"name":"activation of spindle breakdown during mitosis","type":"narrow"},{"name":"activation of spindle degradation during mitosis","type":"narrow"},{"name":"activation of spindle disassembly during mitosis","type":"narrow"},{"name":"positive regulation of mitotic spindle breakdown","type":"exact"},{"name":"positive regulation of mitotic spindle catabolism","type":"exact"},{"name":"positive regulation of mitotic spindle degradation","type":"exact"},{"name":"positive regulation of spindle breakdown during mitosis","type":"exact"},{"name":"positive regulation of spindle degradation during mitosis","type":"exact"},{"name":"positive regulation of spindle disassembly during mitosis","type":"exact"},{"name":"up regulation of mitotic spindle breakdown","type":"exact"},{"name":"up regulation of mitotic spindle catabolism","type":"exact"},{"name":"up regulation of mitotic spindle degradation","type":"exact"},{"name":"up regulation of mitotic spindle disassembly","type":"exact"},{"name":"up regulation of spindle breakdown during mitosis","type":"exact"},{"name":"up regulation of spindle degradation during mitosis","type":"exact"},{"name":"up regulation of spindle disassembly during mitosis","type":"exact"},{"name":"up-regulation of mitotic spindle breakdown","type":"exact"},{"name":"up-regulation of mitotic spindle catabolism","type":"exact"},{"name":"up-regulation of mitotic spindle degradation","type":"exact"},{"name":"up-regulation of mitotic spindle disassembly","type":"exact"},{"name":"up-regulation of spindle breakdown during mitosis","type":"exact"},{"name":"up-regulation of spindle degradation during mitosis","type":"exact"},{"name":"up-regulation of spindle disassembly during mitosis","type":"exact"},{"name":"upregulation of mitotic spindle breakdown","type":"exact"},{"name":"upregulation of mitotic spindle catabolism","type":"exact"},{"name":"upregulation of mitotic spindle degradation","type":"exact"},{"name":"upregulation of mitotic spindle disassembly","type":"exact"},{"name":"upregulation of spindle breakdown during mitosis","type":"exact"},{"name":"upregulation of spindle degradation during mitosis","type":"exact"},{"name":"upregulation of spindle disassembly during mitosis","type":"exact"}],"termid":"GO:1904687"}


id: MONDO:0018406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare male infertility due to adrenal disorder of genetic origin (obsolete MONDO:0018406)","secondary_identifiers":["Orphanet:399994"],"termid":"MONDO:0018406","xrefs":{"Monarch":{"xref_id":"0018406"}}}


id: PR:Q9P6N9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A post-GPI attachment to proteins factor 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13148:SF0","OMA:SCHPO01083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein PER1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.07","secondary_identifiers":["UniProtKB:Q9P6N9"],"synonyms":[{"name":"Spom972h-PGAP3","type":"exact"}],"termid":"PR:Q9P6N9"}


id: PBO:0082220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-agglutinin of alpha-cells; binds to Aga1p during agglutination, N-terminal half is homologous to the immunoglobulin superfamily and contains binding site for a-agglutinin, C-terminal half is highly glycosylated and contains GPI anchor","termid":"PBO:0082220"}


id: PBO:0082992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic copper-zinc superoxide dismutase; detoxifies superoxide; stabilizes Yck1p and Yck2p kinases in glucose to repress respiration; phosphorylated by Dun1p, enters nucleus under oxidative stress to promote transcription of stress response genes; human ortholog SOD1 implicated in ALS complements a null allele; abundance increases under DNA replication stress and during exposure to boric acid; localization to mitochondrial intermembrane space is modulated by MICOS complex","termid":"PBO:0082992"}


id: PBO:0041542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 100","termid":"PBO:0041542"}


id: GO:0003054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the suprachiasmatic nucleus modulates blood pressure at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:rl","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"is_a","term_name":"circadian regulation of systemic arterial blood pressure","termid":"GO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of systemic arterial blood pressure by the suprachiasmatic nucleus","synonyms":[{"name":"SCN regulation of blood pressure","type":"exact"},{"name":"master pacemaker clock regulation of blood pressure","type":"exact"}],"termid":"GO:0003054"}


id: PBO:0091698
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae sgt1","termid":"PBO:0091698"}


id: MONDO:0012406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated hyperparathyroidism","termid":"MONDO:0015027"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparathyroidism 3","secondary_identifiers":["GARD:18255","OMIM:610071","MEDGEN:355277","MESH:C566450","UMLS:C1864729"],"synonyms":[{"name":"HRPT3","type":"exact"},{"name":"hyperparathyroidism 3","type":"exact"},{"name":"hyperparathyroidism, familial isolated","type":"related"}],"termid":"MONDO:0012406","xrefs":{"Monarch":{"xref_id":"0012406"}}}


id: PBO:0042012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 69","termid":"PBO:0042012"}


id: PBO:0033752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sister_chromatid_meiotic_recombination","termid":"PBO:0033752"}


id: PR:O94655
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ras-related protein Rab-7a that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03584","PANTHER:PTHR24073:SF260","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.04c","secondary_identifiers":["UniProtKB:O94655"],"synonyms":[{"name":"Spom972h-RAB7A","type":"exact"}],"termid":"PR:O94655"}


id: GO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-methionine from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid secondary active transmembrane transporter activity","termid":"GO:0005294"},{"relation_name":"is_a","term_name":"L-methionine transmembrane transporter activity","termid":"GO:0015191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-methionine secondary active transmembrane transporter activity","synonyms":[{"name":"L-methionine porter activity","type":"related"}],"termid":"GO:0000102"}


id: MONDO:0000009
data:
  {"annotated_genes":["SJAG_04312","SJAG_02093","SJAG_04887","SJAG_02091","SJAG_02431","SJAG_04621","SJAG_03703","SJAG_03204"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957580"},{"annotations":[85915,85916,85917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018794"},{"annotations":[86156,86155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015912"},{"annotations":[84954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014078"},{"annotations":[86523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014518"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"blood platelet disease","termid":"MONDO:0002245"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":8,"genes_by_uniquename":{"SJAG_02091":null,"SJAG_02093":null,"SJAG_02431":null,"SJAG_03204":null,"SJAG_03703":null,"SJAG_04312":null,"SJAG_04621":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"inherited bleeding disorder, platelet-type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2218","MEDGEN:610","OMIMPS:231200","UMLS:C0005818"],"synonyms":[{"name":"bleeding disorder, platelet-type","type":"exact"},{"name":"blood platelet disease","type":"broad"},{"name":"platelet disorder","type":"broad"},{"name":"thrombocytopathy","type":"related"}],"termid":"MONDO:0000009","terms_by_termid":{"MONDO:0014078":null,"MONDO:0014518":null,"MONDO:0015912":null,"MONDO:0018794":null,"MONDO:0957580":null},"xrefs":{"Monarch":{"xref_id":"0000009"}}}


id: GO:0043574
data:
  {"annotated_genes":["SJAG_02797","SJAG_02693","SJAG_04763","SJAG_04857","SJAG_00702","SJAG_03440","SJAG_05950","SJAG_05315","SJAG_02034","SJAG_01165","SJAG_00326","SJAG_02997","SJAG_03324","SJAG_03781","SJAG_04428","SJAG_00891","SJAG_02619"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79487,71852,70524,73182,111185,96263,102060,69817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[62497,73614,70360],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[64081,98372,115093,117104],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[111186,90219,95219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"}]},"cv_name":"biological_process","definition":"Transport of substances into, out of or within a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_02034":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04428":null,"SJAG_04763":null,"SJAG_04857":null,"SJAG_05315":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"peroxisomal transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0043574","terms_by_termid":{"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0045046":null}}


id: PBO:0075451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA3 antisense RNA 1 (head to head)","termid":"PBO:0075451"}


id: PBO:0043372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 2","termid":"PBO:0043372"}


id: GO:0102075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: OPC4-3-hydroxyacyl-CoA = OPC4-trans-2-enoyl-CoA + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.17"],"gene_count":0,"genotype_count":0,"name":"obsolete OPC4-trans-2-enoyl-CoA hydratase activity (obsolete GO:0102075)","termid":"GO:0102075"}


id: PBO:0067180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 238, pseudogene","termid":"PBO:0067180"}


id: GO:0004470
data:
  {"annotated_genes":["SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004471"}]},"cv_name":"molecular_function","definition":"Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02176":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"malic enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyruvic-malic carboxylase activity","type":"related"}],"termid":"GO:0004470","terms_by_termid":{"GO:0004471":null}}


id: GO:0051234
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id: PBO:0055733
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id: SO:0000783
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id: SO:1000086
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id: MONDO:0000819
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neural tube defect during pregnancy, resulting in the absence of a large portion of the brain and skull in the fetus.","definition_xrefs":["NCIT:C84560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"anencephaly","secondary_identifiers":["MEDGEN:8068","MESH:D000757","OMIMPS:206500","DOID:0060668","UMLS:C0002902","icd11.foundation:1292761836"],"synonyms":[{"name":"anencephalus","type":"exact"}],"termid":"MONDO:0000819","xrefs":{"Monarch":{"xref_id":"0000819"}}}


id: PBO:0052256
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDEL endoplasmic reticulum protein retention receptor 3","termid":"PBO:0052256"}


id: PBO:0005503
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific multicopy membrane protein family 1","termid":"PBO:0005503"}


id: GO:0005861
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of accessory proteins (typically troponin T, troponin I and troponin C) found associated with actin in muscle thin filaments; involved in calcium regulation of muscle contraction.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"striated muscle thin filament","termid":"GO:0005865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"troponin complex","termid":"GO:0005861"}


id: SO:0000094
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from cyanelle sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"cyanelle_sequence","termid":"SO:0000746"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_gene","synonyms":[{"name":"cyanelle gene","type":"exact"}],"termid":"SO:0000094"}


id: SO:0000396
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U6_snRNA"],"synonyms":[{"name":"U6 small nuclear RNA","type":"exact"},{"name":"U6 snRNA","type":"exact"},{"name":"small nuclear RNA U6","type":"exact"},{"name":"snRNA U6","type":"exact"}],"termid":"SO:0000396"}


id: PBO:0070708
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 13","termid":"PBO:0070708"}


id: MONDO:0016695
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-differentiated (WHO grade II), diffusely infiltrating neuroglial tumor, typically located in the cerebral hemispheres. It is composed predominantly of cells which morphologically resemble oligodendroglia. The neoplastic cells have rounded homogeneous nuclei and, on paraffin sections, a swollen, clear cytoplasm ('honeycomb' appearance). (Adapted from WHO)","definition_xrefs":["NCIT:C3288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligodendroglial tumor","termid":"MONDO:0018744"},{"relation_name":"is_a","term_name":"grade II glioma","termid":"MONDO:0021639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"oligodendroglioma","secondary_identifiers":["ONCOTREE:ODG","Orphanet:251627","MEDGEN:45190","UMLS:C0028945","ICDO:9450/3","GARD:9953","DOID:3181","MedDRA:10030286","NANDO:2200089","EFO:0000632","MESH:D009837"],"synonyms":[{"name":"WHO grade II oligodendroglial neoplasm","type":"exact"},{"name":"WHO grade II oligodendroglial tumor","type":"exact"},{"name":"WHO grade II oligodendroglial tumour","type":"exact"},{"name":"oligodendroglial neoplasm","type":"broad"},{"name":"oligodendroglial tumor","type":"broad"},{"name":"oligodendroglial tumour","type":"broad"},{"name":"oligodendroglioma","type":"exact"},{"name":"well differentiated oligodendroglial tumor","type":"exact"},{"name":"well differentiated oligodendroglial tumour","type":"exact"},{"name":"well differentiated oligodendroglioma","type":"exact"}],"termid":"MONDO:0016695","xrefs":{"Monarch":{"xref_id":"0016695"}}}


id: GO:2000175
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pro-T cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"negative regulation of lymphoid progenitor cell differentiation","termid":"GO:1905457"},{"relation_name":"is_a","term_name":"regulation of pro-T cell differentiation","termid":"GO:2000174"},{"relation_name":"negatively_regulates","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of pro-T cell differentiation","synonyms":[{"name":"negative regulation of pro-T lymphocyte differentiation","type":"exact"}],"termid":"GO:2000175"}


id: SO:0000316
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contiguous sequence which begins with, and includes, a start codon and ends with, and includes, a stop codon.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS","synonyms":[{"name":"INSDC_feature:CDS","type":"exact"},{"name":"coding sequence","type":"exact"},{"name":"coding_sequence","type":"exact"}],"termid":"SO:0000316"}


id: GO:0071976
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id: PBO:0065273
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id: GO:0032736
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id: GO:0006888
data:
  {"annotated_genes":["SJAG_05013","SJAG_04419","SJAG_02525","SJAG_01899","SJAG_00858","SJAG_00899","SJAG_00484","SJAG_05344","SJAG_04598","SJAG_04021","SJAG_01642","SJAG_04837","SJAG_04938","SJAG_01415","SJAG_04740","SJAG_03244","SJAG_02264","SJAG_01508","SJAG_00557","SJAG_02839","SJAG_02539","SJAG_03153","SJAG_04196","SJAG_05345","SJAG_02120","SJAG_00906","SJAG_03810","SJAG_04402","SJAG_01600","SJAG_01025","SJAG_02824","SJAG_04513","SJAG_03552","SJAG_00192","SJAG_01991","SJAG_00578","SJAG_02349","SJAG_01409","SJAG_01279","SJAG_00072","SJAG_02160","SJAG_02012","SJAG_03933","SJAG_00767","SJAG_03558","SJAG_04618","SJAG_03467","SJAG_04391","SJAG_04615","SJAG_04528","SJAG_03670","SJAG_04569","SJAG_02234","SJAG_04739","SJAG_01166","SJAG_04592","SJAG_03499","SJAG_02655","SJAG_01003","SJAG_02482","SJAG_04070","SJAG_00357","SJAG_03907","SJAG_04002","SJAG_00330","SJAG_03270","SJAG_04909","SJAG_01633","SJAG_04434","SJAG_00092","SJAG_05326","SJAG_04112","SJAG_02103","SJAG_02640","SJAG_00785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58020,59211,63827,66418,69639,70203,70624,70760,71147,71957,72015,72561,73340,73570,73654,74092,74234,74490,74703,74874,75043,75381,76050,76772,76879,77457,77840,78176,78536,78582,78614,78668,79099,79353,79684,88021,90961,91325,91904,92942,93029,93690,94820,95405,95844,97559,97706,98254,100138,100552,100880,101978,104404,106211,106628,106923,109289,110540,110633,112219,112476,114790,116165,116308,118599,118730],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[72857],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090114"},{"annotations":[76860,78197,74596,75361,74950,71208,76323],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090110"},{"annotations":[76421],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060628"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.","definition_xrefs":["ISBN:0716731363","GOC:ascb_2009","GOC:tb","GOC:dph","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":75,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00092":null,"SJAG_00192":null,"SJAG_00330":null,"SJAG_00357":null,"SJAG_00484":null,"SJAG_00557":null,"SJAG_00578":null,"SJAG_00767":null,"SJAG_00785":null,"SJAG_00858":null,"SJAG_00899":null,"SJAG_00906":null,"SJAG_01003":null,"SJAG_01025":null,"SJAG_01166":null,"SJAG_01279":null,"SJAG_01409":null,"SJAG_01415":null,"SJAG_01508":null,"SJAG_01600":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01899":null,"SJAG_01991":null,"SJAG_02012":null,"SJAG_02103":null,"SJAG_02120":null,"SJAG_02160":null,"SJAG_02234":null,"SJAG_02264":null,"SJAG_02349":null,"SJAG_02482":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02824":null,"SJAG_02839":null,"SJAG_03153":null,"SJAG_03244":null,"SJAG_03270":null,"SJAG_03467":null,"SJAG_03499":null,"SJAG_03552":null,"SJAG_03558":null,"SJAG_03670":null,"SJAG_03810":null,"SJAG_03907":null,"SJAG_03933":null,"SJAG_04002":null,"SJAG_04021":null,"SJAG_04070":null,"SJAG_04112":null,"SJAG_04196":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04419":null,"SJAG_04434":null,"SJAG_04513":null,"SJAG_04528":null,"SJAG_04569":null,"SJAG_04592":null,"SJAG_04598":null,"SJAG_04615":null,"SJAG_04618":null,"SJAG_04739":null,"SJAG_04740":null,"SJAG_04837":null,"SJAG_04909":null,"SJAG_04938":null,"SJAG_05013":null,"SJAG_05326":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"endoplasmic reticulum to Golgi vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-199977","GO:0048221","Reactome:R-HSA-159763"],"synonyms":[{"name":"ER to Golgi transport","type":"exact"},{"name":"ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"anterograde (ER to Golgi) transport","type":"exact"},{"name":"anterograde transport, ER to Golgi","type":"exact"},{"name":"anterograde transport, endoplasmic reticulum to Golgi","type":"exact"},{"name":"anterograde vesicle-mediated transport, ER to Golgi","type":"exact"},{"name":"anterograde vesicle-mediated transport, endoplasmic reticulum to Golgi","type":"exact"},{"name":"endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"rough ER to cis-Golgi transport","type":"exact"},{"name":"rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"}],"termid":"GO:0006888","terms_by_termid":{"GO:0006888":null,"GO:0060628":null,"GO:0090110":null,"GO:0090114":null}}


id: GO:0090740
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the pigment granule membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["PMID:11294610"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of pigment granule membrane (obsolete GO:0090740)","termid":"GO:0090740"}


id: GO:0045217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of junctions between cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction maintenance","termid":"GO:0034331"},{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell junction maintenance","synonyms":[{"name":"intercellular junction maintenance","type":"exact"}],"termid":"GO:0045217"}


id: PBO:0004764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mago-nashi homolog (predicted)","termid":"PBO:0004764"}


id: PBO:0028151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spliceosomal_complex_assembly","termid":"PBO:0028151"}


id: PBO:0029751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_modification","termid":"PBO:0029751"}


id: MONDO:0006912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The presence of gas within the wall of the large or small intestine.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pneumatosis cystoides intestinalis","secondary_identifiers":["ICD9:569.89","EFO:1001113","DOID:13249","UMLS:C0032266","MESH:D011006","MedDRA:10049732","MEDGEN:18527","SCTID:17465007"],"termid":"MONDO:0006912","xrefs":{"Monarch":{"xref_id":"0006912"}}}


id: GO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction","termid":"GO:0002664"},{"relation_name":"positively_regulates","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell tolerance induction","synonyms":[{"name":"activation of T cell tolerance induction","type":"narrow"},{"name":"positive regulation of T lymphocyte tolerance induction","type":"exact"},{"name":"positive regulation of T-cell tolerance induction","type":"exact"},{"name":"positive regulation of T-lymphocyte tolerance induction","type":"exact"},{"name":"stimulation of T cell tolerance induction","type":"narrow"},{"name":"up regulation of T cell tolerance induction","type":"exact"},{"name":"up-regulation of T cell tolerance induction","type":"exact"},{"name":"upregulation of T cell tolerance induction","type":"exact"}],"termid":"GO:0002666"}


id: MONDO:0015058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Waterhouse-Friderichsen syndrome (obsolete MONDO:0015058)","termid":"MONDO:0015058","xrefs":{"Monarch":{"xref_id":"0015058"}}}


id: PBO:0002010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga2 (predicted)","termid":"PBO:0002010"}


id: PBO:0079900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, complex III subunit XI","termid":"PBO:0079900"}


id: PBO:0073660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3-HDAC complex associated factor","termid":"PBO:0073660"}


id: GO:0050269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coniferyl aldehyde + H2O + NAD(P)+ = ferulate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"coniferyl-aldehyde dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:RXN-1241"],"synonyms":[{"name":"coniferyl aldehyde:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050269"}


id: GO:1904933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation in midbrain.","definition_xrefs":["PMID:24431302","GOC:bf","PMID:18953410","GOC:TermGenie","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"},{"relation_name":"regulates","term_name":"cell proliferation in midbrain","termid":"GO:0033278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation in midbrain","synonyms":[{"name":"regulation of cell proliferation in mesencephalon","type":"exact"},{"name":"regulation of mesencepahalic cell proliferation","type":"related"}],"termid":"GO:1904933"}


id: GO:0061311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand the binding to its receptor on the surface of a cell, which contributes to the progression of the heart over time.","definition_xrefs":["GOC:signaling","GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor signaling pathway involved in heart development","synonyms":[{"name":"cell surface receptor linked signaling pathway involved in heart development","type":"exact"},{"name":"cell surface receptor linked signalling pathway involved in heart development","type":"exact"}],"termid":"GO:0061311"}


id: PBO:0005444
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.3.2.10","termid":"PBO:0005444"}


id: PBO:0063273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 19 pseudogene","termid":"PBO:0063273"}


id: PBO:0052744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 36","termid":"PBO:0052744"}


id: MONDO:0008954
data:
  {"annotated_genes":["SJAG_00702"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86630],"is_not":false,"summary":null,"term":"MONDO:0008954"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX5 defect","termid":"MONDO:0100262"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005244","MONDO:0005066","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 2A (Zellweger)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:214110","DOID:0080477","GARD:15149","MEDGEN:763187","UMLS:C3550273"],"synonyms":[{"name":"PBD2A","type":"related"},{"name":"peroxisome biogenesis disorder 2A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 2","type":"related"}],"termid":"MONDO:0008954","terms_by_termid":{"MONDO:0008954":null},"xrefs":{"Monarch":{"xref_id":"0008954"}}}


id: PBO:0041649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA2D3 antisense RNA 1","termid":"PBO:0041649"}


id: PBO:0056263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAMDC2 antisense RNA 1","termid":"PBO:0056263"}


id: PBO:0003463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Mas5 (predicted)","termid":"PBO:0003463"}


id: PBO:0065502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraspeckle component 1","termid":"PBO:0065502"}


id: PBO:0051588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 20","termid":"PBO:0051588"}


id: FYPO:0007612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more STREP motifs occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"increased transcription from STREP promoter","synonyms":[{"name":"decreased transcription from STREP promoter during mitotic cell cycle","type":"related"},{"name":"decreased transcription from STREP promoter during vegetative growth","type":"exact"},{"name":"reduced transcription from STREP promoter","type":"exact"}],"termid":"FYPO:0007612"}


id: MONDO:0009873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pilodental dysplasia-refractive errors syndrome is a rare ectodermal dysplasia syndrome characterized by dysplastic abnormalities of the hair and teeth (including hypodontia, abnormally shaped teeth, scalp hypotrichosis and pili annulati), follicular hyperkeratosis on the trunk and limbs, and hyperopia. Intensified delineation, reticular hyperpigmentation of the nape and astigmatism have also been reported. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:2892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pilodental dysplasia-refractive errors syndrome","secondary_identifiers":["MESH:C535763","UMLS:C1849805","GARD:277","MEDGEN:376661","OMIM:262020"],"synonyms":[{"name":"Euhidrotic ectodermal dysplasia","type":"exact"},{"name":"Kopysc-Barczyk-Krol syndrome","type":"exact"},{"name":"PILODENTAL dysplasia with refractive errors","type":"related"},{"name":"Trichodental dysplasia with hyperopia","type":"related"}],"termid":"MONDO:0009873","xrefs":{"Monarch":{"xref_id":"0009873"}}}


id: PBO:0049042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 33","termid":"PBO:0049042"}


id: GO:0019246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L(+)-lactate from other compounds, including pyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate biosynthetic process from pyruvate","termid":"GO:0019244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L(+)-lactate biosynthetic process from pyruvate","secondary_identifiers":["MetaCyc:PWY-5481"],"synonyms":[{"name":"L(+)-lactate anabolism from pyruvate","type":"exact"},{"name":"L(+)-lactate formation from pyruvate","type":"exact"},{"name":"L(+)-lactate synthesis from pyruvate","type":"exact"},{"name":"S-lactate biosynthetic process from pyruvate","type":"exact"}],"termid":"GO:0019246"}


id: PBO:0067259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 333, pseudogene","termid":"PBO:0067259"}


id: GO:0075233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of spore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of spore movement on or near host (obsolete GO:0075233)","termid":"GO:0075233"}


id: MONDO:0012033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bradyopsia is characterized by prolonged electroretinal response suppression leading to difficulties adjusting to changes in luminance, normal to subnormal acuity and photophobia.","definition_xrefs":["Orphanet:75374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"bradyopsia","secondary_identifiers":["OMIMPS:608415","icd11.foundation:1497247503","GARD:12299","MEDGEN:331206","MESH:C564243","SCTID:711163009","UMLS:C1842073","ICD9:368.8","DOID:0050335"],"synonyms":[{"name":"PERRS","type":"exact"},{"name":"bradyopsia","type":"exact"},{"name":"prolonged electroretinal response suppression","type":"exact"}],"termid":"MONDO:0012033","xrefs":{"Monarch":{"xref_id":"0012033"}}}


id: GO:1903353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nucleus organization.","definition_xrefs":["GOC:TermGenie","PMID:16943282","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"nucleus organization","termid":"GO:0006997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nucleus organization","synonyms":[{"name":"regulation of nuclear morphology","type":"related"},{"name":"regulation of nuclear organisation","type":"exact"},{"name":"regulation of nuclear organization","type":"exact"},{"name":"regulation of nuclear organization and biogenesis","type":"related"},{"name":"regulation of nucleus organization and biogenesis","type":"related"}],"termid":"GO:1903353"}


id: MONDO:0001671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Accumulation of mucus within the appendix.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"mucocele of appendix","secondary_identifiers":["ICD9:543.9","DOID:13248","icd11.foundation:159513245","MEDGEN:10116","SCTID:53773002","NCIT:C3241","UMLS:C0026684"],"synonyms":[{"name":"Appendicele mucocele","type":"exact"},{"name":"appendiceal mucocele","type":"exact"},{"name":"mucocele of the appendix","type":"exact"}],"termid":"MONDO:0001671","xrefs":{"Monarch":{"xref_id":"0001671"}}}


id: PBO:0049710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 associated protein kinase","termid":"PBO:0049710"}


id: PBO:0083348
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id: PBO:0075967
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id: PBO:0064110
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id: FYPO:0007821
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id: PBO:0004710
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id: GO:0102277
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id: GO:0047944
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id: GO:0005730
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id: MONDO:0024535
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any singleton-Merten dysplasia in which the cause of the disease is a mutation in the IFIH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Singleton-Merten dysplasia","termid":"MONDO:0008429"},{"relation_name":"is_a","term_name":"IFIH1-related type 1 interferonopathy","termid":"MONDO:0700262"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Singleton-Merten syndrome 1","secondary_identifiers":["UMLS:C4225427","MEDGEN:899946","OMIM:182250"],"synonyms":[{"name":"IFIH1 singleton-Merten dysplasia","type":"exact"},{"name":"SGMRT1","type":"related"},{"name":"singleton-Merten dysplasia caused by mutation in IFIH1","type":"exact"},{"name":"singleton-Merten syndrome 1","type":"related"}],"termid":"MONDO:0024535","xrefs":{"Monarch":{"xref_id":"0024535"}}}


id: PBO:0043093
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 5","termid":"PBO:0043093"}


id: GO:0040024
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dauer larva over time, through the facultative diapause of the dauer (enduring) larval stage, with specialized traits adapted for dispersal and long-term survival, with elevated stress resistance and without feeding.","definition_xrefs":["ISBN:087969307X","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dauer larval development","termid":"GO:0040024"}


id: GO:0016128
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id: MONDO:0020175
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant tumor of palpebral epidermis (obsolete MONDO:0020175)","termid":"MONDO:0020175","xrefs":{"Monarch":{"xref_id":"0020175"}}}


id: PBO:0054401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1797","termid":"PBO:0054401"}


id: GO:1901771
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of daunorubicin.","definition_xrefs":["GOC:TermGenie","PMID:7601857","GOC:yaf","UniPathway:UPA00054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"daunorubicin metabolic process","termid":"GO:0044597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"daunorubicin biosynthetic process","synonyms":[{"name":"daunorubicin anabolism","type":"exact"},{"name":"daunorubicin biosynthesis","type":"exact"},{"name":"daunorubicin formation","type":"exact"},{"name":"daunorubicin synthesis","type":"exact"}],"termid":"GO:1901771"}


id: MONDO:0014959
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  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86986],"is_not":false,"summary":null,"term":"MONDO:0014959"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 12A (cardiomyopathic type), autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080130","MEDGEN:934643","OMIM:617184","UMLS:C4310676"],"synonyms":[{"name":"MTDPS12A","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 12A (cardiomyopathic type) AD","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 12a (cardiomyopathic type), autosomal dominant","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 12a (cardiomyopathic type), autosomal dominant; MTDPS12A","type":"exact"}],"termid":"MONDO:0014959","terms_by_termid":{"MONDO:0014959":null},"xrefs":{"Monarch":{"xref_id":"0014959"}}}


id: MONDO:1011069
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in Javan langur.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, Javan langur","secondary_identifiers":["OMIA:001033-222416"],"termid":"MONDO:1011069","xrefs":{"Monarch":{"xref_id":"1011069"}}}


id: GO:0045088
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of innate immune response","termid":"GO:0045088"}


id: PATO:0000362
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000362 direction value (obsolete PATO:0000362)","termid":"PATO:0000362"}


id: PBO:0082632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of cytosolic iron-sulfur protein assembly (CIA) machinery; acts at late step of Fe-S cluster assembly; forms CIA targeting complex with Cia2p and Met18p that directs Fe-S cluster incorporation and maturation of a subset of cytosolic and nuclear proteins involved in methionine biosynthesis, DNA replication and repair, transcription and telomere maintenance; contains WD40 repeats; human homolog CIAO1 complements the yeast cia1 null mutant","termid":"PBO:0082632"}


id: PBO:0083171
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps HYP2/YEL034W, a verified gene that encodes eiF-5A","termid":"PBO:0083171"}


id: MONDO:0015767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 4p is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the short arm of chromosome 4, with a highly variable phenotype, typically characterized by pre- and postnatal growth delay, psychomotor developmental delay and craniofacial dysmorphism (microcephaly, prominent glabelle, hypertelorism, enlarged ears with abnormal helix and antihelix, bulbous nose with flat or depressed nasal bridge, long philtrum, retrognathia with pointed chin). Additional features include skeletal (rocker bottom feet, arachnodactyly, camptodactyly) and renal malformations, cardiac defects, ocular abnormalities and abnormal genitalia in males.","definition_xrefs":["Orphanet:1738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 4","termid":"MONDO:0016941"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 4p","secondary_identifiers":["MEDGEN:419836","MESH:C537643","GARD:6091","UMLS:C2931571"],"synonyms":[{"name":"4p duplication","type":"related"},{"name":"4p trisomy","type":"related"},{"name":"Duplication 4p","type":"exact"},{"name":"Duplication of the short arm of chromosome 4","type":"exact"},{"name":"chromosome 4p duplication","type":"related"},{"name":"partial trisomy 4p","type":"related"},{"name":"trisomy of the short arm of chromosome 4","type":"exact"},{"name":"trisomy type 4p","type":"exact"}],"termid":"MONDO:0015767","xrefs":{"Monarch":{"xref_id":"0015767"}}}


id: PBO:0029712
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_5-fluorouracil","termid":"PBO:0029712"}


id: GO:0071809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of fever generation via regulation of the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of prostaglandin biosynthetic process","termid":"GO:0031392"},{"relation_name":"is_a","term_name":"regulation of fever generation","termid":"GO:0031620"},{"relation_name":"regulates","term_name":"regulation of fever generation by prostaglandin biosynthetic process","termid":"GO:0100008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of fever generation by regulation of prostaglandin biosynthesis","termid":"GO:0071809"}


id: MONDO:0043237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Painful sensations in the tongue, including a sensation of burning.","definition_xrefs":["MESH:D005926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"},{"relation_name":"is_a","term_name":"neurological pain disorder","termid":"MONDO:0700057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glossodynia","secondary_identifiers":["icd11.foundation:1755751917","MEDGEN:6617","SCTID:30731004","UMLS:C0017672"],"synonyms":[{"name":"Glossalgias","type":"related"},{"name":"Glossodynias","type":"related"},{"name":"Glossopyroses","type":"related"},{"name":"glossalgia","type":"related"},{"name":"glossodynia","type":"exact"},{"name":"glossopyrosis","type":"related"},{"name":"painful tongue","type":"related"},{"name":"soreness of tongue","type":"related"}],"termid":"MONDO:0043237","xrefs":{"Monarch":{"xref_id":"0043237"}}}


id: GO:0009930
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the cell parallel to the zygotic axis.","definition_xrefs":["GOC:mtg_sensu","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell surface","termid":"GO:0009986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0009986","GO:0005575"],"is_obsolete":false,"name":"longitudinal side of cell surface","termid":"GO:0009930"}


id: PATO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001039 absolute ratio (obsolete PATO:0001039)","termid":"PATO:0001039"}


id: GO:0045964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving dopamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine metabolic process","termid":"GO:0042053"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine metabolic process","termid":"GO:0045915"},{"relation_name":"positively_regulates","term_name":"dopamine metabolic process","termid":"GO:0042417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine metabolic process","synonyms":[{"name":"activation of dopamine metabolic process","type":"narrow"},{"name":"positive regulation of dopamine metabolism","type":"exact"},{"name":"stimulation of dopamine metabolic process","type":"narrow"},{"name":"up regulation of dopamine metabolic process","type":"exact"},{"name":"up-regulation of dopamine metabolic process","type":"exact"},{"name":"upregulation of dopamine metabolic process","type":"exact"}],"termid":"GO:0045964"}


id: MONDO:0005382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of bone that initially results in the excessive resorption of bone (by osteoclasts) followed by the replacement of normal bone marrow with vascular and fibrous tissue.","definition_xrefs":["NCIT:C3292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"metabolic bone disorder","termid":"MONDO:0800486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone Paget disease","secondary_identifiers":["EFO:0004261","DOID:5408","OMIMPS:167250","Orphanet:280110","MEDGEN:10493","SCTID:2089002","UMLS:C0029401"],"synonyms":[{"name":"Paget disease of bone","type":"exact"},{"name":"Paget's bone disease","type":"exact"},{"name":"Paget's disease","type":"related"},{"name":"Paget's disease of bone","type":"exact"},{"name":"Paget's disease of the bone","type":"exact"},{"name":"Pagets disease (bone)","type":"exact"},{"name":"bone Paget disease","type":"exact"},{"name":"bone Paget's disease","type":"exact"},{"name":"familial Paget's disease of bone","type":"related"},{"name":"osseous Paget's disease","type":"exact"},{"name":"osteitis deformans","type":"exact"}],"termid":"MONDO:0005382","xrefs":{"Monarch":{"xref_id":"0005382"}}}


id: PBO:0054426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1822","termid":"PBO:0054426"}


id: MOD:00019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-isoleucine.","definition_xrefs":["PubMed:6692818","DeltaMass:0","ChEBI:30009","RESID:AA0010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine residue","synonyms":[{"name":"(2S,3S)-2-amino-3-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-3-methylpentanoic acid","type":"exact"},{"name":"3-methyl-norvaline","type":"exact"},{"name":"Ile","type":"exact"},{"name":"Isoleucyl","type":"exact"},{"name":"L-erythro-isoleucine","type":"exact"},{"name":"L-isoleucine","type":"exact"},{"name":"alpha-amino-beta-methylvaleric acid","type":"exact"}],"termid":"MOD:00019"}


id: GO:0043090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of amino acids into a cell or organelle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"amino acid import","synonyms":[{"name":"amino acid uptake","type":"exact"}],"termid":"GO:0043090"}


id: PBO:0066694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enriched in melanoma 3","termid":"PBO:0066694"}


id: PBO:0077670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFRSF14 antisense RNA 1","termid":"PBO:0077670"}


id: PBO:0040356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 5","termid":"PBO:0040356"}


id: GO:0006950
data:
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id: PBO:0004261
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id: GO:1901203
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id: GO:0016421
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003989"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of a carboxyl group to a molecule that is attached to CoA, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"CoA carboxylase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016421","terms_by_termid":{"GO:0003989":null}}


id: GO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(beta-D-ribofuranosyl)-1,4-dihydronicotinamide + a quinone = 1-(beta-D-ribofuranosyl)nicotinamide + a hydroquinone.","definition_xrefs":["RHEA:12364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydronicotinamide riboside quinone reductase activity","secondary_identifiers":["MetaCyc:1.10.99.2-RXN","Reactome:R-HSA-8936519","EC:1.10.5.1"],"synonyms":[{"name":"N-ribosyldihydronicotinamide dehydrogenase (quinone) activity","type":"related"},{"name":"NQO2","type":"related"},{"name":"NQO2 activity","type":"related"},{"name":"NRH:quinone oxidoreductase 2 activity","type":"narrow"},{"name":"QR2 activity","type":"related"},{"name":"quinone reductase 2 activity","type":"related"},{"name":"ribosyldihydronicotinamide dehydrogenase (quinone) activity","type":"exact"}],"termid":"GO:0001512"}


id: GO:0036382
data:
  {"annotated_genes":["SJAG_01668"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87498],"is_not":false,"summary":null,"term":"GO:0036382"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a reduced flavin + NAD+ = an oxidized flavin + 2 H+ + NADH.","definition_xrefs":["GOC:rs","RHEA:31303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"flavin reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12446","EC:1.5.1.36","KEGG_REACTION:R09662"],"termid":"GO:0036382","terms_by_termid":{"GO:0036382":null}}


id: MONDO:0012312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any short QT syndrome in which the cause of the disease is a mutation in the KCNH2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short QT syndrome","termid":"MONDO:0000453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"short QT syndrome type 1","secondary_identifiers":["MESH:C566506","UMLS:C1865020","MEDGEN:355891","OMIM:609620","GARD:18633"],"synonyms":[{"name":"KCNH2 short QT syndrome","type":"exact"},{"name":"SQT1","type":"related"},{"name":"SQTS","type":"exact"},{"name":"short QT syndrome 1","type":"related"},{"name":"short QT syndrome caused by mutation in KCNH2","type":"exact"},{"name":"short QT syndrome type 1","type":"exact"}],"termid":"MONDO:0012312","xrefs":{"Monarch":{"xref_id":"0012312"}}}


id: PBO:0069808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1094, pseudogene","termid":"PBO:0069808"}


id: GO:1902090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumagillin biosynthetic process.","definition_xrefs":["GOC:di","PMID:23488861","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"fumagillin biosynthetic process","termid":"GO:1902086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of fumagillin biosynthetic process","synonyms":[{"name":"regulation of fumagillin anabolism","type":"exact"},{"name":"regulation of fumagillin biosynthesis","type":"exact"},{"name":"regulation of fumagillin formation","type":"exact"},{"name":"regulation of fumagillin synthesis","type":"exact"}],"termid":"GO:1902090"}


id: PBO:0063374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate cytidylyltransferase 1B, choline","termid":"PBO:0063374"}


id: PBO:0055144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2563","termid":"PBO:0055144"}


id: PBO:0087869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional coactivator; bridges the DNA-binding region of Gcn4p and TATA-binding protein Spt15p; suppressor of frameshift mutations; protein abundance increases in response to DNA replication stress","termid":"PBO:0087869"}


id: PBO:0003639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-TEFb-associated cyclin-dependent protein kinase Cdk9","termid":"PBO:0003639"}


id: PR:Q76PC4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1442.02 gene.","definition_xrefs":["UniProtKB:Q76PC4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0649 protein C1442.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.02","synonyms":[{"name":"Spom972h-SPCC1442.02","type":"exact"}],"termid":"PR:Q76PC4"}


id: PBO:0060523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0060523"}


id: GO:0045210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fas ligand (FasL or CD95L), an antigen originally found to be expressed on the cell surface of activated human T-lymphocytes and B-lymphocytes and a variety of malignant human lymphoid cell lines.","definition_xrefs":["PMID:10637433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"FasL biosynthetic process","synonyms":[{"name":"APT1LG1 biosynthetic process","type":"exact"},{"name":"CD178 biosynthetic process","type":"exact"},{"name":"CD95L biosynthesis","type":"exact"},{"name":"CD95L biosynthetic process","type":"exact"},{"name":"FASLG biosynthetic process","type":"exact"},{"name":"Fas-L biosynthetic process","type":"exact"},{"name":"FasL anabolism","type":"exact"},{"name":"FasL biosynthesis","type":"exact"},{"name":"FasL formation","type":"exact"},{"name":"FasL synthesis","type":"exact"},{"name":"fas ligand biosynthetic process","type":"exact"}],"termid":"GO:0045210"}


id: SO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between +20 and +30 relative to the TSS. Consensus sequence is CSARCSSAACGS. Tends to co-occur with INR motif (SO:0000014). Tends to not occur with DPE motif (SO:0000015) or DMv5 (SO:0001159).","definition_xrefs":["PMID:16858867","PMID:12537576:15231738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTE","synonyms":[{"name":"CSARCSSAACGS","type":"narrow"},{"name":"motif ten element","type":"exact"},{"name":"motif_ten_element","type":"exact"}],"termid":"SO:0001162"}


id: GO:0032370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of lipid localization","termid":"GO:1905954"},{"relation_name":"positively_regulates","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid transport","synonyms":[{"name":"activation of lipid transport","type":"narrow"},{"name":"stimulation of lipid transport","type":"narrow"},{"name":"up regulation of lipid transport","type":"exact"},{"name":"up-regulation of lipid transport","type":"exact"},{"name":"upregulation of lipid transport","type":"exact"}],"termid":"GO:0032370"}


id: PBO:0065772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Q-nucleotide N-glycosylase 1","termid":"PBO:0065772"}


id: PBO:0087957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane osmosensor for filamentous growth and HOG pathways; involved in activation of the Cdc42p- and MAP kinase-dependent filamentous growth pathway and the high-osmolarity glycerol (HOG) response pathway; phosphorylated by Hog1p; interacts with Pbs2p, Msb2p, Hkr1p, and Ste11p","termid":"PBO:0087957"}


id: GO:0044677
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisted of eight polypeptides. This complex catalyzes the formation of methyl-coenzyme M and H4MPT from N5-methyl-H4MPT and CoM during methanogenesis.","definition_xrefs":["GOC:mengo_curators","PMID:8477726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methyl-tetrahydromethanopterin:coenzyme M methyltransferase complex","synonyms":[{"name":"5-methyl-5,6,7,8-tetrahydromethanopterin:2-mercaptoethane sulfonate 2-methyltransferase complex","type":"exact"},{"name":"N5-methyltetrahydromethanopterin-coenzyme M methyltransferase complex","type":"exact"},{"name":"coenzyme M methyltransferase complex","type":"broad"},{"name":"methyl-H4MPT","type":"broad"}],"termid":"GO:0044677"}


id: FYPO:0001559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methionine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal methionine import","synonyms":[{"name":"normal L-methionine import","type":"exact"},{"name":"normal L-methionine import across plasma membrane","type":"exact"},{"name":"normal methionine import during mitotic cell cycle","type":"related"},{"name":"normal methionine import during vegetative growth","type":"exact"},{"name":"normal methionine import into cell","type":"exact"},{"name":"normal methionine uptake","type":"exact"}],"termid":"FYPO:0001559"}


id: MONDO:0003485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete colon squamous cell carcinoma (obsolete MONDO:0003485)","termid":"MONDO:0003485","xrefs":{"Monarch":{"xref_id":"0003485"}}}


id: PBO:0065553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTGER4P2-CDK2AP2P2 readthrough, transcribed pseudogene","termid":"PBO:0065553"}


id: GO:0140884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a type II interferon-mediated signaling in the host organism. Type II interferon is also known as interferon-gamma.","definition_xrefs":["PMID:28901902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host interferon-mediated signaling pathway","termid":"GO:0140886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host type II interferon-mediated signaling pathway","synonyms":[{"name":"negative regulation by virus of host type II interferon-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type II IFN-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type II interferon-mediated signaling pathway","type":"narrow"},{"name":"suppression by virus of host type II interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0140884"}


id: PBO:0045337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 10","termid":"PBO:0045337"}


id: PBO:0054421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1817","termid":"PBO:0054421"}


id: PBO:0108519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 and histone Rpd3L deacetylase complex LCCL domain subunit Rxt3","termid":"PBO:0108519"}


id: GO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the vacuolar membrane of a vacuole that retains the same shape regardless of cell cycle phase. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:krc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"plant-type vacuole lumen","synonyms":[{"name":"lumen of vacuole with cell cycle-independent morphology","type":"exact"}],"termid":"GO:0000330"}


id: PBO:0028187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_length","termid":"PBO:0028187"}


id: PBO:0045806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early endosome antigen 1","termid":"PBO:0045806"}


id: PBO:0027015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027015"}


id: PBO:0048441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 4","termid":"PBO:0048441"}


id: GO:0034071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + aminoglycoside = ADP + phosphoaminoglycoside.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"aminoglycoside phosphotransferase activity","secondary_identifiers":["EC:2.7.1.190"],"synonyms":[{"name":"aminoglycoside kinase activity","type":"exact"}],"termid":"GO:0034071"}


id: PBO:0076938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuftelin interacting protein 11","termid":"PBO:0076938"}


id: FYPO:0001180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during vegetative growth (obsolete FYPO:0001180)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during vegetative growth","type":"exact"},{"name":"increased protein tyrosine phosphorylation during mitotic cell cycle","type":"related"},{"name":"increased tyrosine phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001180"}


id: MONDO:0005327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic or pathological injury to the hip in which the continuity of either the femoral head, femoral neck, intertrochanteric or subtrochanteric regions is broken. Symptoms include pain in the hip or groin, bruising and swelling in and around the hip area. The injured hip is turned outward and the leg appears shorter on that side.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hip fracture","secondary_identifiers":["EFO:0003964","MESH:D006620","SCTID:263225007"],"termid":"MONDO:0005327","xrefs":{"Monarch":{"xref_id":"0005327"}}}


id: PBO:0011442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc3","termid":"PBO:0011442"}


id: GO:0036249
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117997],"is_not":false,"summary":null,"term":"GO:0036249"}]},"cv_name":"biological_process","definition":"The directed movement of cadmium ions into the vacuole.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"cadmium ion transmembrane transport","termid":"GO:0070574"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cadmium ion import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar cadmium import","type":"related"}],"termid":"GO:0036249","terms_by_termid":{"GO:0036249":null}}


id: GO:0014045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the endothelial barrier between the blood and the brain. The endothelial cells in the brain capillaries are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["GOC:aruk","PMID:30280653","GOC:dph","GOC:dgh","GOC:sart","PMID:20080302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"},{"relation_name":"is_a","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of endothelial blood-brain barrier","synonyms":[{"name":"establishment of endothelial BBB","type":"exact"},{"name":"establishment of endothelial blood/brain barrier","type":"exact"}],"termid":"GO:0014045"}


id: PBO:0059665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 31","termid":"PBO:0059665"}


id: PBO:0030132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_copper_level","termid":"PBO:0030132"}


id: MONDO:0008895
data:
  {"annotated_genes":["SJAG_02959","SJAG_02582","SJAG_02580"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86724,86725,86726],"is_not":false,"summary":null,"term":"MONDO:0008895"}]},"cv_name":"mondo","definition":"Hereditary arterial and articular multiple calcification syndrome is a very rare genetic vascular disease of autosomal recessive inheritance, described in less than 20 patients to date, characterized by adult-onset (as early as the second decade of life) isolated calcification of the arteries of the lower extremities (including the iliac, femoral, and tibial arteries) as well as the capsule joints of the fingers, wrists, ankles and feet, and that usually manifests with mild paresthesias of the lower extremities, intense joint pain and swelling, and early onset arthritis of affected joints.","definition_xrefs":["Orphanet:289601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary arterial and articular multiple calcification syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1859372","DOID:0111582","MESH:C565891","GARD:10762","SCTID:718602007","MEDGEN:347132","OMIM:211800"],"synonyms":[{"name":"ACDC","type":"related"},{"name":"CALJA","type":"exact"},{"name":"arterial calcification and distal joint calcification","type":"related"},{"name":"arterial calcification due to CD73 deficiency","type":"related"},{"name":"arterial calcification due to deficiency of Cd73","type":"related"},{"name":"calcification of joints and arteries","type":"exact"}],"termid":"MONDO:0008895","terms_by_termid":{"MONDO:0008895":null},"xrefs":{"Monarch":{"xref_id":"0008895"}}}


id: MONDO:0021412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the maxillary sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus disorder","termid":"MONDO:0001735"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of maxillary sinus","secondary_identifiers":["MEDGEN:120498","SCTID:29074008","UMLS:C0264239","ICD9:471.8","NCIT:C3931"],"synonyms":[{"name":"maxillary antral polyp","type":"exact"},{"name":"maxillary sinus polyp","type":"exact"},{"name":"polyp of the maxillary sinus","type":"exact"}],"termid":"MONDO:0021412","xrefs":{"Monarch":{"xref_id":"0021412"}}}


id: PBO:0068165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 472","termid":"PBO:0068165"}


id: GO:0042697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cessation of menstruation, occurring in (e.g.) the human female usually around the age of 50.","definition_xrefs":["GOC:curators","PMID:18495681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menstrual cycle phase","termid":"GO:0022601"},{"relation_name":"is_a","term_name":"reproductive senescence","termid":"GO:1990636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menopause","secondary_identifiers":["Wikipedia:Menopause"],"termid":"GO:0042697"}


